>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)|
          Length = 595

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 197 GGLRDKANFI*IVTTFSDFSLNPRTEKGGEFCLFSKSDS 313
           GG+R++++      TFSDF+L+PR ++    C F K  S
Sbjct: 5   GGIREESS----EKTFSDFNLDPRLQRAIHKCEFEKPTS 39

>YL613_MIMIV (Q5UP74) Hypothetical protein L613|
          Length = 386

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
 Frame = -2

Query: 558 YSDAFALREKCATPILKQV---RSDVTRYRY-GDEQHLDEALKRIFQYGLGGGIPRRSAP 391
           Y    ++ EK   P+++++    S    +R+  D  +L   + R F  G    IPR    
Sbjct: 118 YQQIDSVGEKIYAPLVRKLFIGHSIWVSHRWISDSMNL---ITREFSIGFSKSIPRHHCE 174

Query: 390 ILQKIQEVTDDGKYCLVLEFEAKSLGLSDFEKRQNSPPFSVLG 262
             + I+++ ++    +++E +   L  SD+EK  N+   ++ G
Sbjct: 175 TFESIRKLIENSCIPVIIETDYLDLEQSDYEKLINNQKRNIYG 217

>JPH3_MOUSE (Q9ET77) Junctophilin-3 (Junctophilin type 3) (JP-3)|
          Length = 744

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +2

Query: 293 LFSKSDSPNDLASNSSTKQYFPSSVTS*IFCNIGALRLGMPPPKPY*KIRFSASSR 460
           L+ K  +P+DL  + S  Q FP+S TS             PPP P  + + +  SR
Sbjct: 460 LYRKGTTPSDLTPDDSPLQSFPASPTS------------TPPPAPASRTKMAHFSR 503


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,565,336
Number of Sequences: 219361
Number of extensions: 1629527
Number of successful extensions: 4224
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4224
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)