ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11g04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 299 ctgtagggatcctcctctctcttctccttaagatacttgatgcagctctccacttcagat 358 ||||| || |||| |||||| |||||||| |||||||| ||||||||||| ||||| || Sbjct: 75889 ctgtaagggtccttctctcttttctcctttagatacttcatgcagctctcaacttcggac 75948 Query: 359 ttgacatgcaaatagaggtgttgggccttctccttgtctcttagctccttctccctccct 418 || |||| || |||||||||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 75949 ttaacattcaggtagaggtgttgggcgttctctttgtctcttagttccttttctctccct 76008 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 416 cctcttgtttcaataggcttcccaaagatgaagtaaaacctccctggcacttttggcgta 475 |||||||||||||| ||||||||||||||||| |||||||||||||| | ||||| | | Sbjct: 76186 cctcttgtttcaattggcttcccaaagatgaaataaaacctccctggtatctttggggca 76245 Query: 476 agcactacaggatgcatatcttgattttttatctctccagtagaatcagtcct 528 |||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 76246 gccactactggatggattctttgatattttaattctccggtagaatcagtcct 76298 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 616 atcacatatatcatcttctccaaccactccaaatggta 653 |||||||||||||||||||||||| ||||||||||||| Sbjct: 76817 atcacatatatcatcttctccaactactccaaatggta 76854 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 541 accaccttcatttatcttcttgtcaatgctgtcataaaatgggagcttcacaagatcgtt 600 |||| ||||||||| | || |||||| | ||||||| ||||| | ||||| |||||||| Sbjct: 76450 accatcttcatttagcatcctgtcaaggatgtcatagaatggaatcttcataagatcgtc 76509 Query: 601 gtagtctaacaacat 615 ||||||||||||||| Sbjct: 76510 gtagtctaacaacat 76524
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 299 ctgtagggatcctcctctctcttctccttaagatacttgatgcagctctccacttcagat 358 ||||| || |||| |||||| |||||||| |||||||| ||||||||||| ||||| || Sbjct: 19480482 ctgtaagggtccttctctcttttctcctttagatacttcatgcagctctcaacttcggac 19480541 Query: 359 ttgacatgcaaatagaggtgttgggccttctccttgtctcttagctccttctccctccct 418 || |||| || |||||||||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 19480542 ttaacattcaggtagaggtgttgggcgttctctttgtctcttagttccttttctctccct 19480601 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 416 cctcttgtttcaataggcttcccaaagatgaagtaaaacctccctggcacttttggcgta 475 |||||||||||||| ||||||||||||||||| |||||||||||||| | ||||| | | Sbjct: 19480779 cctcttgtttcaattggcttcccaaagatgaaataaaacctccctggtatctttggggca 19480838 Query: 476 agcactacaggatgcatatcttgattttttatctctccagtagaatcagtcct 528 |||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 19480839 gccactactggatggattctttgatattttaattctccggtagaatcagtcct 19480891 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 616 atcacatatatcatcttctccaaccactccaaatggta 653 |||||||||||||||||||||||| ||||||||||||| Sbjct: 19481410 atcacatatatcatcttctccaactactccaaatggta 19481447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 541 accaccttcatttatcttcttgtcaatgctgtcataaaatgggagcttcacaagatcgtt 600 |||| ||||||||| | || |||||| | ||||||| ||||| | ||||| |||||||| Sbjct: 19481043 accatcttcatttagcatcctgtcaaggatgtcatagaatggaatcttcataagatcgtc 19481102 Query: 601 gtagtctaacaacat 615 ||||||||||||||| Sbjct: 19481103 gtagtctaacaacat 19481117
>gb|AC005350.1| Homo sapiens chromosome 5, BAC clone 261j17 (LBNL H190), complete sequence Length = 78661 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 141 tatgcatataaaatattaacata 163 ||||||||||||||||||||||| Sbjct: 64217 tatgcatataaaatattaacata 64195
>emb|CR352233.9| Zebrafish DNA sequence from clone CH211-193J5 in linkage group 13, complete sequence Length = 149899 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 tatgcatataaaatattaacata 163 ||||||||||||||||||||||| Sbjct: 66446 tatgcatataaaatattaacata 66468
>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9, complete sequence Length = 217065 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 tataaaatattaacataaagaat 169 ||||||||||||||||||||||| Sbjct: 66194 tataaaatattaacataaagaat 66216
>gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, complete sequence Length = 138824 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 141 tatgcatataaaatattaacata 163 ||||||||||||||||||||||| Sbjct: 1021 tatgcatataaaatattaacata 999
>gb|AC122706.3| Homo sapiens chromosome 5 clone RP11-114I23, complete sequence Length = 118762 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 tatgcatataaaatattaacata 163 ||||||||||||||||||||||| Sbjct: 36227 tatgcatataaaatattaacata 36249
>emb|BX004962.10| Zebrafish DNA sequence from clone CH211-93N23, complete sequence Length = 170736 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 141 tatgcatataaaatattaacata 163 ||||||||||||||||||||||| Sbjct: 11109 tatgcatataaaatattaacata 11087
>ref|XM_473032.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aactacagttattttgaggca 124 ||||||||||||||||||||| Sbjct: 1086 aactacagttattttgaggca 1106
>ref|XM_664494.1| Plasmodium berghei strain ANKA hypothetical protein (PB300055.00.0) partial mRNA Length = 465 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 aactatgcatataaaatatta 158 ||||||||||||||||||||| Sbjct: 331 aactatgcatataaaatatta 311
>emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 in linkage group 15, complete sequence Length = 191457 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 tatgcatataaaatattaaca 161 ||||||||||||||||||||| Sbjct: 134842 tatgcatataaaatattaaca 134862
>gb|AC025824.37| Homo sapiens chromosome 15 clone RP11-430M3, complete sequence Length = 177917 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 tatgcatataaaatattaacataaa 165 |||| |||||||||||||||||||| Sbjct: 172991 tatgtatataaaatattaacataaa 172967
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence Length = 203908 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 tcttagctccttctccctccc 417 ||||||||||||||||||||| Sbjct: 115345 tcttagctccttctccctccc 115325
>gb|AC012478.18| Homo sapiens chromosome 15 clone RP11-386M24, complete sequence Length = 186540 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 tatgcatataaaatattaacataaa 165 |||| |||||||||||||||||||| Sbjct: 123159 tatgtatataaaatattaacataaa 123135
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aactacagttattttgaggca 124 ||||||||||||||||||||| Sbjct: 24812960 aactacagttattttgaggca 24812980 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 atattaacataaagaatataaaca 176 ||||||||||||||| |||||||| Sbjct: 16843210 atattaacataaagattataaaca 16843187 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tcttctccttaagatacttg 337 |||||||||||||||||||| Sbjct: 4431059 tcttctccttaagatacttg 4431078
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ctaactaatggtgttctggaa 210 ||||||||||||||||||||| Sbjct: 30466 ctaactaatggtgttctggaa 30446
>gb|AC091544.11| Homo sapiens chromosome 15, clone RP11-386M24, complete sequence Length = 186674 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 tatgcatataaaatattaacataaa 165 |||| |||||||||||||||||||| Sbjct: 63369 tatgtatataaaatattaacataaa 63393
>gb|AC020973.3|AC020973 Mus musculus chromosome 18 clone RPCI-23_72C14, complete sequence Length = 213062 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 atgcatataaaatattaacat 162 ||||||||||||||||||||| Sbjct: 35925 atgcatataaaatattaacat 35945
>gb|AC020972.3|AC020972 Mus musculus chromosome 18 clone RP23-6P18, complete sequence Length = 218100 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 atgcatataaaatattaacat 162 ||||||||||||||||||||| Sbjct: 70701 atgcatataaaatattaacat 70681
>gb|AC008243.6|AC008243 Homo sapiens, clone RP11-45L9, complete sequence Length = 161509 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 gtacttacatagaaatttaca 28 ||||||||||||||||||||| Sbjct: 89338 gtacttacatagaaatttaca 89318
>emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13, complete sequence Length = 142564 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 tatgcatataaaatattaaca 161 ||||||||||||||||||||| Sbjct: 69103 tatgcatataaaatattaaca 69083
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 atgcatataaaatattaacat 162 ||||||||||||||||||||| Sbjct: 159296 atgcatataaaatattaacat 159316
>dbj|AB025615.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K5K13 Length = 83544 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 aactatgcatataaaatatta 158 ||||||||||||||||||||| Sbjct: 36486 aactatgcatataaaatatta 36506
>dbj|AK111787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095H18, full insert sequence Length = 1941 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aactacagttattttgaggca 124 ||||||||||||||||||||| Sbjct: 1237 aactacagttattttgaggca 1257
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 aactacagttattttgaggca 124 ||||||||||||||||||||| Sbjct: 74676 aactacagttattttgaggca 74696
>ref|NM_123477.3| Arabidopsis thaliana catalytic AT5G41120 mRNA, complete cds Length = 2216 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 625 atcatcttctccaaccactccaaa 648 ||||||||||||||| |||||||| Sbjct: 1689 atcatcttctccaacaactccaaa 1666
>ref|NM_194037.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 108 tcctcctctctcttctcctt 127
>ref|XM_474584.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1134 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcttctccttaagatacttg 337 |||||||||||||||||||| Sbjct: 748 tcttctccttaagatacttg 729
>gb|AY720933.1| Oryza sativa (indica cultivar-group) beta-cyanoalanine synthase (CAS) mRNA, complete cds Length = 1406 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcttctccttaagatacttg 337 |||||||||||||||||||| Sbjct: 804 tcttctccttaagatacttg 785
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ctctctcttctccttaagat 332 |||||||||||||||||||| Sbjct: 93718 ctctctcttctccttaagat 93699
>gb|AC007862.7| Trypanosoma brucei chromosome 2 clone RPCI93-10C8, complete sequence Length = 150671 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggtatttctgcatcagaaccatga 265 ||||||| |||||||||||||||| Sbjct: 98978 ggtatttgtgcatcagaaccatga 99001
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggtatttctgcatcagaaccatga 265 ||||||| |||||||||||||||| Sbjct: 577382 ggtatttgtgcatcagaaccatga 577405
>gb|AC117724.14| Mus musculus chromosome 5, clone RP24-347F19, complete sequence Length = 183083 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gcaaataataagaaataact 141 |||||||||||||||||||| Sbjct: 78929 gcaaataataagaaataact 78910
>gb|BC053618.1| Homo sapiens similar to ankyrin-repeat protein Nrarp, mRNA (cDNA clone MGC:61598 IMAGE:6143133), complete cds Length = 1785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atataaaatattaacataaa 165 |||||||||||||||||||| Sbjct: 1754 atataaaatattaacataaa 1773
>gb|AC124107.8| Mus musculus chromosome 5, clone RP24-317M4, complete sequence Length = 194641 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 186038 tcctcctctctcttctcctt 186019
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 17265 tcctcctctctcttctcctt 17246
>gb|AY973633.1| Oncidium Gower Ramsey clone ocrtISO22 carotenoid isomerase mRNA, complete cds Length = 2109 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 attttgaggcaaataataag 133 |||||||||||||||||||| Sbjct: 820 attttgaggcaaataataag 801
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence Length = 274518 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tgcatataaaatattaacat 162 |||||||||||||||||||| Sbjct: 196502 tgcatataaaatattaacat 196521
>gb|AC110521.14| Mus musculus chromosome 12, clone RP23-50H15, complete sequence Length = 189474 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tctccctccctcttgtttca 427 |||||||||||||||||||| Sbjct: 103682 tctccctccctcttgtttca 103701
>gb|AF130343.2| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence Length = 292718 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 tattagaccaccttcatttatctt 558 |||||||||||||||||| ||||| Sbjct: 272755 tattagaccaccttcattaatctt 272732
>gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, complete sequence Length = 208036 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 13232 tcctcctctctcttctcctt 13213
>gb|AC122194.4| Mus musculus BAC clone RP23-47D6 from chromosome 13, complete sequence Length = 192347 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tcctctctcttctccttaag 330 |||||||||||||||||||| Sbjct: 180786 tcctctctcttctccttaag 180805
>gb|AC132582.3| Mus musculus BAC clone RP24-319N10 from chromosome 12, complete sequence Length = 159310 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 ttttttatctctccagtagaatca 523 |||||||| ||||||||||||||| Sbjct: 7979 ttttttatttctccagtagaatca 8002
>ref|XM_946483.1| Trypanosoma brucei TREU927 heat shock protein 78 (hsp70) partial mRNA Length = 2439 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 ggtatttctgcatcagaaccatga 265 ||||||| |||||||||||||||| Sbjct: 2364 ggtatttgtgcatcagaaccatga 2387
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tgcatatcttgattttttat 507 |||||||||||||||||||| Sbjct: 125417 tgcatatcttgattttttat 125436
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tgcatatcttgattttttat 507 |||||||||||||||||||| Sbjct: 124081 tgcatatcttgattttttat 124100
>gb|AC124755.4| Mus musculus BAC clone RP23-285L4 from chromosome 12, complete sequence Length = 190631 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 50892 tcctcctctctcttctcctt 50873
>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence Length = 167597 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aataagaaataactatgcat 147 |||||||||||||||||||| Sbjct: 139601 aataagaaataactatgcat 139582
>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence Length = 190309 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cataaagaatataaacaatt 179 |||||||||||||||||||| Sbjct: 71686 cataaagaatataaacaatt 71667
>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence Length = 225868 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aataagaaataactatgcat 147 |||||||||||||||||||| Sbjct: 53031 aataagaaataactatgcat 53012
>ref|XM_758478.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0543) partial mRNA Length = 1638 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 34 tcctcctctctcttctcctt 15
>gb|AC092213.4| Homo sapiens BAC clone RP11-190I6 from 7, complete sequence Length = 137237 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atataaaatattaacataaa 165 |||||||||||||||||||| Sbjct: 115222 atataaaatattaacataaa 115241
>gb|AC007270.2| Homo sapiens BAC clone GS1-77A9 from 7, complete sequence Length = 182958 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atataaaatattaacataaa 165 |||||||||||||||||||| Sbjct: 94963 atataaaatattaacataaa 94944
>gb|AC117805.8| Mus musculus chromosome 19, clone RP24-565L9, complete sequence Length = 156701 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cctctctcttctccttaaga 331 |||||||||||||||||||| Sbjct: 84477 cctctctcttctccttaaga 84496
>gb|AY344170.1| Chorizandra sphaerocephala chloroplast tRNA-Leu gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe gene, partial sequence Length = 896 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tattaacataaagaatataa 173 |||||||||||||||||||| Sbjct: 339 tattaacataaagaatataa 320
>emb|BX927329.12| Zebrafish DNA sequence from clone CH211-250K18 in linkage group 22, complete sequence Length = 165549 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 aaatattaacataaagaatataaa 174 |||||| ||||||||||||||||| Sbjct: 106805 aaatataaacataaagaatataaa 106782
>emb|Z97632.3|HS196E23 Human DNA sequence from clone RP1-196E23 on chromosome Xq26.1-27.2 Contains the VGLL1 gene for vestgial like 1 (Drosophila), the HTATSF1 gene for HIV TAT specific factor 1, the BRS3 gene for bombesin-like receptor 3 and a CpG island, complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ttacatagaaatttacagtt 31 |||||||||||||||||||| Sbjct: 82673 ttacatagaaatttacagtt 82692
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, two novel genes, a pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB) and a CpG island, complete sequence Length = 178362 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 aataggcttcccaaagatga 446 |||||||||||||||||||| Sbjct: 80604 aataggcttcccaaagatga 80585
>emb|AL355810.10| Human DNA sequence from clone RP11-40E6 on chromosome 13, complete sequence Length = 103749 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atataaaatattaacataaa 165 |||||||||||||||||||| Sbjct: 96185 atataaaatattaacataaa 96204
>emb|AL133395.21| Human DNA sequence from clone RP11-446H13 on chromosome 10 Contains the 3' end of the gene for VPS10 domain receptor protein SORCS 1 and an RPL23A (60S ribosmal protein 23A) pseudogene, complete sequence Length = 217929 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aaataataagaaataactat 143 |||||||||||||||||||| Sbjct: 169371 aaataataagaaataactat 169352
>emb|AL109852.13|HS1178I21 Human DNA sequence from clone RP5-1178I21 on chromosome Xq27.1-27.3, complete sequence Length = 62268 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 atgcatataaaatattaacataaa 165 ||||||| |||||||||||||||| Sbjct: 15785 atgcatagaaaatattaacataaa 15762
>ref|XM_966570.1| PREDICTED: Tribolium castaneum similar to CG8199-PA (LOC660327), mRNA Length = 1531 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 cctcctctctcttctccttaagatactt 336 ||||||||||||||||||| ||| |||| Sbjct: 1093 cctcctctctcttctccttgagaaactt 1066
>gb|AY096438.1| Arabidopsis thaliana unknown protein (At5g41120) mRNA, complete cds Length = 2086 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 625 atcatcttctccaaccactccaaa 648 ||||||||||||||| |||||||| Sbjct: 1650 atcatcttctccaacaactccaaa 1627
>gb|AY070069.1| Arabidopsis thaliana unknown protein (At5g41120) mRNA, complete cds Length = 2233 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 625 atcatcttctccaaccactccaaa 648 ||||||||||||||| |||||||| Sbjct: 1690 atcatcttctccaacaactccaaa 1667
>ref|NM_001004354.1| Homo sapiens similar to ankyrin-repeat protein Nrarp (MGC61598), mRNA Length = 1785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atataaaatattaacataaa 165 |||||||||||||||||||| Sbjct: 1754 atataaaatattaacataaa 1773
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 acttagtgttaacatttatt 55 |||||||||||||||||||| Sbjct: 251032 acttagtgttaacatttatt 251051
>ref|NM_001017020.2| Xenopus tropicalis ADP-ribosylation factor-like 2 binding protein (arl2bp), mRNA Length = 1273 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tattttgaggcaaataataa 132 |||||||||||||||||||| Sbjct: 1168 tattttgaggcaaataataa 1149
>gb|AC153499.7| Mus musculus 10 BAC RP23-478J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207222 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ctcttagctccttctccctccctc 419 |||| ||||||||||||||||||| Sbjct: 114978 ctctcagctccttctccctccctc 114955
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 atattaacataaagaatataaaca 176 ||||||||||||||| |||||||| Sbjct: 93641 atattaacataaagattataaaca 93618
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tcttctccttaagatacttg 337 |||||||||||||||||||| Sbjct: 58791 tcttctccttaagatacttg 58810
>emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in linkage group 20 Contains a novel gene and four CpG islands, complete sequence Length = 224072 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 taaactacagttattttgag 121 |||||||||||||||||||| Sbjct: 90200 taaactacagttattttgag 90181
>gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, complete sequence Length = 206737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tctggaagtgctcagctcag 223 |||||||||||||||||||| Sbjct: 99923 tctggaagtgctcagctcag 99904
>gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, complete sequence Length = 200326 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 tattagaccaccttcatttatctt 558 |||||||||||||||||| ||||| Sbjct: 124370 tattagaccaccttcattaatctt 124393
>emb|AL954137.18| Zebrafish DNA sequence from clone CH211-222L21 in linkage group 11, complete sequence Length = 222163 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aggcaaataataagaaataa 139 |||||||||||||||||||| Sbjct: 74131 aggcaaataataagaaataa 74112
>gb|AC091683.53| Mus musculus strain C57BL/6J clone rp23-155l11 map 13, complete sequence Length = 236314 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tcctctctcttctccttaag 330 |||||||||||||||||||| Sbjct: 56251 tcctctctcttctccttaag 56270
>gb|AC093689.4| Homo sapiens BAC clone RP11-725M22 from 4, complete sequence Length = 167590 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ctatgcatataaaatattaa 159 |||||||||||||||||||| Sbjct: 157245 ctatgcatataaaatattaa 157226
>dbj|AK021723.1| Homo sapiens cDNA FLJ11661 fis, clone HEMBA1004617 Length = 2356 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acataaagaatataaacaat 178 |||||||||||||||||||| Sbjct: 1116 acataaagaatataaacaat 1097
>gb|AY628525.1| Alectoris rufa chromosome W chromo-helicase-DNA-binding (CHD1) gene, intron 25 Length = 514 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tatgcatataaaatattaac 160 |||||||||||||||||||| Sbjct: 57 tatgcatataaaatattaac 76
>gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, complete sequence Length = 109953 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tattttgaggcaaataataa 132 |||||||||||||||||||| Sbjct: 52520 tattttgaggcaaataataa 52501
>gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181345 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ttaacataaagaatataaac 175 |||||||||||||||||||| Sbjct: 113762 ttaacataaagaatataaac 113781
>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence Length = 173836 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttagtgttaacatttattga 57 |||||||||||||||||||| Sbjct: 79927 ttagtgttaacatttattga 79946
>gb|AC098861.2| Homo sapiens BAC clone RP11-297J2 from 4, complete sequence Length = 185791 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atataaaatattaacataaa 165 |||||||||||||||||||| Sbjct: 137824 atataaaatattaacataaa 137843
>gb|M27470.1|SIVMNDGB1 Simian immunodeficiency virus, complete genome Length = 9215 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 atcctcctctctcttctcct 326 |||||||||||||||||||| Sbjct: 1919 atcctcctctctcttctcct 1900
>gb|AC091898.2| Homo sapiens chromosome 5 clone RP11-152K4, complete sequence Length = 177709 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tattttgaggcaaataataa 132 |||||||||||||||||||| Sbjct: 172871 tattttgaggcaaataataa 172852
>gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9, complete sequence Length = 185444 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 45651 tcctcctctctcttctcctt 45632
>gb|AC154806.2| Mus musculus BAC clone RP23-78F6 from chromosome 14, complete sequence Length = 218522 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aacttagtgttaacatttat 54 |||||||||||||||||||| Sbjct: 191308 aacttagtgttaacatttat 191289
>emb|AL512624.5|CNS07EFD Human chromosome 14 DNA sequence BAC C-2311B13 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 154078 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aaaatattaacataaagaat 169 |||||||||||||||||||| Sbjct: 51353 aaaatattaacataaagaat 51372
>emb|AL929601.4|CNS08CCG Human chromosome 14 DNA sequence Partial sequence from BAC R-244H18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176156 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 aaaatattaacataaagaat 169 |||||||||||||||||||| Sbjct: 130143 aaaatattaacataaagaat 130124
>emb|AL589182.4|CNS07EG2 Human chromosome 14 DNA sequence BAC R-146E13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161840 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 aaaatattaacataaagaat 169 |||||||||||||||||||| Sbjct: 5174 aaaatattaacataaagaat 5155
>ref|NM_001015724.1| Xenopus tropicalis MGC107872 protein (MGC107872), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tattttgaggcaaataataa 132 |||||||||||||||||||| Sbjct: 1182 tattttgaggcaaataataa 1163
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 14911802 tcctcctctctcttctcctt 14911783
>dbj|AB052362.2| Mus musculus RrasGAP-3 gene for R-ras RTPase activating protein-3, complete cds Length = 30207 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 9562 tcctcctctctcttctcctt 9581
>gb|AC124420.4| Mus musculus BAC clone RP24-322N8 from chromosome 12, complete sequence Length = 164950 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 ttttttatctctccagtagaatca 523 |||||||| ||||||||||||||| Sbjct: 128658 ttttttatttctccagtagaatca 128681
>gb|BC089656.1| Xenopus tropicalis MGC107872 protein, mRNA (cDNA clone MGC:107872 IMAGE:7022797), complete cds Length = 1907 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tattttgaggcaaataataa 132 |||||||||||||||||||| Sbjct: 1182 tattttgaggcaaataataa 1163
>gb|AC079465.5| Homo sapiens chromosome 5 clone CTD-2124P24, complete sequence Length = 184585 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tctggaagtgctcagctcag 223 |||||||||||||||||||| Sbjct: 169596 tctggaagtgctcagctcag 169615
>gb|AC174480.1| Mus musculus BAC clone RP23-154N2 from chromosome 1, complete sequence Length = 207205 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 29619 tcctcctctctcttctcctt 29638
>gb|AC173966.1| Mus musculus BAC clone RP23-159L16 from chromosome 14, complete sequence Length = 188342 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aacttagtgttaacatttat 54 |||||||||||||||||||| Sbjct: 114684 aacttagtgttaacatttat 114665 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aacttagtgttaacatttat 54 |||||||||||||||||||| Sbjct: 58729 aacttagtgttaacatttat 58710
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 57013 tcctcctctctcttctcctt 57032
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 96628 tcctcctctctcttctcctt 96609
>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503E05 Length = 168258 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 147846 tcctcctctctcttctcctt 147827
>emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chromosome X, complete sequence Length = 206856 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aacttagtgttaacatttat 54 |||||||||||||||||||| Sbjct: 47367 aacttagtgttaacatttat 47386
>dbj|AB010072.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MEE6 Length = 83698 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 625 atcatcttctccaaccactccaaa 648 ||||||||||||||| |||||||| Sbjct: 45816 atcatcttctccaacaactccaaa 45839
>dbj|AK102512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095I16, full insert sequence Length = 1436 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcttctccttaagatacttg 337 |||||||||||||||||||| Sbjct: 804 tcttctccttaagatacttg 785
>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence Length = 214016 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cataaagaatataaacaatt 179 |||||||||||||||||||| Sbjct: 26896 cataaagaatataaacaatt 26915
>gb|AC134613.5| Mus musculus BAC clone RP23-133J23 from 8, complete sequence Length = 187148 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 168232 tcctcctctctcttctcctt 168213
>gb|AC126797.4| Mus musculus BAC clone RP23-443F6 from 1, complete sequence Length = 192663 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 149387 tcctcctctctcttctcctt 149406
>emb|CR626885.5| Zebrafish DNA sequence from clone DKEY-166H15 in linkage group 20, complete sequence Length = 28565 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 ttattttgaggcaaataataagaaataa 139 ||||||||| ||||||||||| |||||| Sbjct: 2448 ttattttgatgcaaataataataaataa 2421
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tcttctccttaagatacttg 337 |||||||||||||||||||| Sbjct: 95322 tcttctccttaagatacttg 95341
>gb|AF117712.1|AF117712 Homo sapiens bombesin receptor subtype 3 gene, intron 2, complete sequence, and partial cds Length = 1531 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ttacatagaaatttacagtt 31 |||||||||||||||||||| Sbjct: 1383 ttacatagaaatttacagtt 1364
>emb|AL356596.3|CNS05TDF Human chromosome 14 DNA sequence BAC R-354G16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179318 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 taacaacatatcacatatat 626 |||||||||||||||||||| Sbjct: 2356 taacaacatatcacatatat 2375
>emb|CR762122.2| Xenopus tropicalis finished cDNA, clone TEgg016g21 Length = 1273 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tattttgaggcaaataataa 132 |||||||||||||||||||| Sbjct: 1168 tattttgaggcaaataataa 1149
>emb|AL806514.8| Mouse DNA sequence from clone RP23-18D24 on chromosome 2, complete sequence Length = 206358 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aaataataagaaataactat 143 |||||||||||||||||||| Sbjct: 4076 aaataataagaaataactat 4057
>gb|AC122542.3| Mus musculus BAC clone RP24-572J16 from 9, complete sequence Length = 175952 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 33064 tcctcctctctcttctcctt 33083
>gb|AC134623.5| Mus musculus BAC clone RP23-20K21 from 8, complete sequence Length = 234976 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 194826 tcctcctctctcttctcctt 194845
>gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, complete sequence Length = 202869 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tcctctctcttctccttaag 330 |||||||||||||||||||| Sbjct: 139043 tcctctctcttctccttaag 139062
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 tgcatatcttgattttttat 507 |||||||||||||||||||| Sbjct: 111458 tgcatatcttgattttttat 111439
>emb|AL805937.11| Mouse DNA sequence from clone RP23-139B4 on chromosome X, complete sequence Length = 178671 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tcctcctctctcttctcctt 327 |||||||||||||||||||| Sbjct: 24570 tcctcctctctcttctcctt 24589
>gb|AC167013.4| Mus musculus BAC clone RP23-262F9 from chromosome 14, complete sequence Length = 236791 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aacttagtgttaacatttat 54 |||||||||||||||||||| Sbjct: 192849 aacttagtgttaacatttat 192868
>gb|AC153841.1| Mus musculus 6 BAC RP23-260M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190541 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 aaatttacagttctgaactt 39 |||||||||||||||||||| Sbjct: 174692 aaatttacagttctgaactt 174711
>gb|AC156790.2| Mus musculus BAC clone RP24-359N3 from chromosome 14, complete sequence Length = 233946 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aacttagtgttaacatttat 54 |||||||||||||||||||| Sbjct: 49988 aacttagtgttaacatttat 50007
>emb|AL844581.7| Mouse DNA sequence from clone RP23-146O7 on chromosome 2, complete sequence Length = 207639 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 tatcttgattttttatctct 511 |||||||||||||||||||| Sbjct: 114134 tatcttgattttttatctct 114153
>emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chromosome 4, complete sequence Length = 207430 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 aaataataagaaataactatgcat 147 ||||||||| |||||||||||||| Sbjct: 153267 aaataataataaataactatgcat 153290
>emb|AL121821.7|CNS01DSN Human chromosome 14 DNA sequence BAC C-2298J14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 127539 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 taacaacatatcacatatat 626 |||||||||||||||||||| Sbjct: 6767 taacaacatatcacatatat 6748
>emb|AJ002005.1|OCAJ2005 Oryctolagus cuniculus gene encoding ileal sodium-dependent bile acid transporter Length = 27247 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 taataagaaataactatgcatata 150 |||||||||| ||||||||||||| Sbjct: 5884 taataagaaacaactatgcatata 5907
>dbj|AP000529.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region, clone:c3G11 Length = 37981 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aaaatattaacataaagaat 169 |||||||||||||||||||| Sbjct: 16314 aaaatattaacataaagaat 16333
>dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-402K1, complete sequence Length = 187735 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaatattaacataaagaata 170 |||||||||||||||||||| Sbjct: 146743 aaatattaacataaagaata 146724 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,505,169 Number of Sequences: 3902068 Number of extensions: 8505169 Number of successful extensions: 201125 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 200413 Number of HSP's gapped (non-prelim): 710 length of query: 654 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 631 effective length of database: 17,143,297,704 effective search space: 10817420851224 effective search space used: 10817420851224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
