>ref|XM_480927.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2202

 Score =  268 bits (135), Expect = 2e-68
 Identities = 387/471 (82%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
            |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 1800 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 1741

                                                                        
Query: 295  ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
            ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 1740 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 1681

                                                                        
Query: 355  tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
            ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 1680 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 1621

                                                                        
Query: 415  ctcatcatgatcctgtccacgacgaggtccggcgaatcgatgttcgggtcctccgtgatc 474
            |||||||| |||||||||||    ||||| || |  || |  || ||||| || ||||||
Sbjct: 1620 ctcatcatcatcctgtccacactcaggtcaggtggctccacatttgggtcttctgtgatc 1561

                                                                        
Query: 475  tcctggaaggtgactgcgtcgttggaccaaacttgatcctgcattgatcgtggctttctg 534
            ||||||||||||||  | || |  ||||| || ||||||||||| || || || || | |
Sbjct: 1560 tcctggaaggtgacaccctcatctgaccagacatgatcctgcatcgaccggggtttccgg 1501

                                                                        
Query: 535  gtcttcgctttgagtttcgccagcttctcgatcgagatgcccgcacgcctagctacattt 594
            || ||||||  ||| ||||| ||||||||||| | |||||| || ||||| ||||| || 
Sbjct: 1500 gttttcgctcggagcttcgcaagcttctcgatggtgatgccggcgcgcctcgctacgttc 1441

                                                                        
Query: 595  tggttagtaggctgctccccttccaagatgcactccagccttgctttccccacctttttc 654
              ||| || || ||||||||||||| |||||| |||| |||||| || ||||||||| ||
Sbjct: 1440 gcgttggtgggttgctccccttccatgatgcattccatccttgccttgcccacctttctc 1381

                                                               
Query: 655  agacgagcatacacgctctccggcaaccgaatcagtcttgaatgcttgaag 705
            ||| | |||||||| |||||||| ||||| || |||||||| | |||||||
Sbjct: 1380 agaagcgcatacacactctccggtaaccggattagtcttgagttcttgaag 1330

>ref|XM_507175.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0087F21.45
            mRNA
          Length = 2257

 Score =  268 bits (135), Expect = 2e-68
 Identities = 387/471 (82%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
            |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 1848 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 1789

                                                                        
Query: 295  ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
            ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 1788 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 1729

                                                                        
Query: 355  tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
            ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 1728 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 1669

                                                                        
Query: 415  ctcatcatgatcctgtccacgacgaggtccggcgaatcgatgttcgggtcctccgtgatc 474
            |||||||| |||||||||||    ||||| || |  || |  || ||||| || ||||||
Sbjct: 1668 ctcatcatcatcctgtccacactcaggtcaggtggctccacatttgggtcttctgtgatc 1609

                                                                        
Query: 475  tcctggaaggtgactgcgtcgttggaccaaacttgatcctgcattgatcgtggctttctg 534
            ||||||||||||||  | || |  ||||| || ||||||||||| || || || || | |
Sbjct: 1608 tcctggaaggtgacaccctcatctgaccagacatgatcctgcatcgaccggggtttccgg 1549

                                                                        
Query: 535  gtcttcgctttgagtttcgccagcttctcgatcgagatgcccgcacgcctagctacattt 594
            || ||||||  ||| ||||| ||||||||||| | |||||| || ||||| ||||| || 
Sbjct: 1548 gttttcgctcggagcttcgcaagcttctcgatggtgatgccggcgcgcctcgctacgttc 1489

                                                                        
Query: 595  tggttagtaggctgctccccttccaagatgcactccagccttgctttccccacctttttc 654
              ||| || || ||||||||||||| |||||| |||| |||||| || ||||||||| ||
Sbjct: 1488 gcgttggtgggttgctccccttccatgatgcattccatccttgccttgcccacctttctc 1429

                                                               
Query: 655  agacgagcatacacgctctccggcaaccgaatcagtcttgaatgcttgaag 705
            ||| | |||||||| |||||||| ||||| || |||||||| | |||||||
Sbjct: 1428 agaagcgcatacacactctccggtaaccggattagtcttgagttcttgaag 1378

>dbj|AK099922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116M03, full
            insert sequence
          Length = 2203

 Score =  268 bits (135), Expect = 2e-68
 Identities = 387/471 (82%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
            |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 1801 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 1742

                                                                        
Query: 295  ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
            ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 1741 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 1682

                                                                        
Query: 355  tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
            ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 1681 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 1622

                                                                        
Query: 415  ctcatcatgatcctgtccacgacgaggtccggcgaatcgatgttcgggtcctccgtgatc 474
            |||||||| |||||||||||    ||||| || |  || |  || ||||| || ||||||
Sbjct: 1621 ctcatcatcatcctgtccacactcaggtcaggtggctccacatttgggtcttctgtgatc 1562

                                                                        
Query: 475  tcctggaaggtgactgcgtcgttggaccaaacttgatcctgcattgatcgtggctttctg 534
            ||||||||||||||  | || |  ||||| || ||||||||||| || || || || | |
Sbjct: 1561 tcctggaaggtgacaccctcatctgaccagacatgatcctgcatcgaccggggtttccgg 1502

                                                                        
Query: 535  gtcttcgctttgagtttcgccagcttctcgatcgagatgcccgcacgcctagctacattt 594
            || ||||||  ||| ||||| ||||||||||| | |||||| || ||||| ||||| || 
Sbjct: 1501 gttttcgctcggagcttcgcaagcttctcgatggtgatgccggcgcgcctcgctacgttc 1442

                                                                        
Query: 595  tggttagtaggctgctccccttccaagatgcactccagccttgctttccccacctttttc 654
              ||| || || ||||||||||||| |||||| |||| |||||| || ||||||||| ||
Sbjct: 1441 gcgttggtgggttgctccccttccatgatgcattccatccttgccttgcccacctttctc 1382

                                                               
Query: 655  agacgagcatacacgctctccggcaaccgaatcagtcttgaatgcttgaag 705
            ||| | |||||||| |||||||| ||||| || |||||||| | |||||||
Sbjct: 1381 agaagcgcatacacactctccggtaaccggattagtcttgagttcttgaag 1331

>dbj|AK068874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170C15, full
            insert sequence
          Length = 2258

 Score =  268 bits (135), Expect = 2e-68
 Identities = 387/471 (82%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
            |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 1849 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 1790

                                                                        
Query: 295  ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
            ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 1789 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 1730

                                                                        
Query: 355  tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
            ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 1729 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 1670

                                                                        
Query: 415  ctcatcatgatcctgtccacgacgaggtccggcgaatcgatgttcgggtcctccgtgatc 474
            |||||||| |||||||||||    ||||| || |  || |  || ||||| || ||||||
Sbjct: 1669 ctcatcatcatcctgtccacactcaggtcaggtggctccacatttgggtcttctgtgatc 1610

                                                                        
Query: 475  tcctggaaggtgactgcgtcgttggaccaaacttgatcctgcattgatcgtggctttctg 534
            ||||||||||||||  | || |  ||||| || ||||||||||| || || || || | |
Sbjct: 1609 tcctggaaggtgacaccctcatctgaccagacatgatcctgcatcgaccggggtttccgg 1550

                                                                        
Query: 535  gtcttcgctttgagtttcgccagcttctcgatcgagatgcccgcacgcctagctacattt 594
            || ||||||  ||| ||||| ||||||||||| | |||||| || ||||| ||||| || 
Sbjct: 1549 gttttcgctcggagcttcgcaagcttctcgatggtgatgccggcgcgcctcgctacgttc 1490

                                                                        
Query: 595  tggttagtaggctgctccccttccaagatgcactccagccttgctttccccacctttttc 654
              ||| || || ||||||||||||| |||||| |||| |||||| || ||||||||| ||
Sbjct: 1489 gcgttggtgggttgctccccttccatgatgcattccatccttgccttgcccacctttctc 1430

                                                               
Query: 655  agacgagcatacacgctctccggcaaccgaatcagtcttgaatgcttgaag 705
            ||| | |||||||| |||||||| ||||| || |||||||| | |||||||
Sbjct: 1429 agaagcgcatacacactctccggtaaccggattagtcttgagttcttgaag 1379

>dbj|AB096012.1| Oryza sativa (japonica cultivar-group) SIG6 mRNA for Sig6, complete
            cds
          Length = 1720

 Score =  268 bits (135), Expect = 2e-68
 Identities = 387/471 (82%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
            |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 1673 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 1614

                                                                        
Query: 295  ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
            ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 1613 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 1554

                                                                        
Query: 355  tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
            ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 1553 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 1494

                                                                        
Query: 415  ctcatcatgatcctgtccacgacgaggtccggcgaatcgatgttcgggtcctccgtgatc 474
            |||||||| |||||||||||    ||||| || |  || |  || ||||| || ||||||
Sbjct: 1493 ctcatcatcatcctgtccacactcaggtcaggtggctccacatttgggtcttctgtgatc 1434

                                                                        
Query: 475  tcctggaaggtgactgcgtcgttggaccaaacttgatcctgcattgatcgtggctttctg 534
            ||||||||||||||  | || |  ||||| || ||||||||||| || || || || | |
Sbjct: 1433 tcctggaaggtgacaccctcatctgaccagacatgatcctgcatcgaccggggtttccgg 1374

                                                                        
Query: 535  gtcttcgctttgagtttcgccagcttctcgatcgagatgcccgcacgcctagctacattt 594
            || ||||||  ||| ||||| ||||||||||| | |||||| || ||||| ||||| || 
Sbjct: 1373 gttttcgctcggagcttcgcaagcttctcgatggtgatgccggcgcgcctcgctacgttc 1314

                                                                        
Query: 595  tggttagtaggctgctccccttccaagatgcactccagccttgctttccccacctttttc 654
              ||| || || ||||||||||||| |||||| |||| |||||| || ||||||||| ||
Sbjct: 1313 gcgttggtgggttgctccccttccatgatgcattccatccttgccttgcccacctttctc 1254

                                                               
Query: 655  agacgagcatacacgctctccggcaaccgaatcagtcttgaatgcttgaag 705
            ||| | |||||||| |||||||| ||||| || |||||||| | |||||||
Sbjct: 1253 agaagcgcatacacactctccggtaaccggattagtcttgagttcttgaag 1203

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  198 bits (100), Expect = 2e-47
 Identities = 175/200 (87%)
 Strand = Plus / Minus

                                                                           
Query: 235     ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
               |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 8674708 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 8674649

                                                                           
Query: 295     ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
               ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 8674648 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 8674589

                                                                           
Query: 355     tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
               ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 8674588 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 8674529

                                   
Query: 415     ctcatcatgatcctgtccac 434
               |||||||| |||||||||||
Sbjct: 8674528 ctcatcatcatcctgtccac 8674509



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                           
Query: 499     gaccaaacttgatcctgcattgatcgtggctttctggtcttcgctttgagtttcgccagc 558
               ||||| || ||||||||||| || || || || | ||| ||||||  ||| ||||| |||
Sbjct: 8673980 gaccagacatgatcctgcatcgaccggggtttccgggttttcgctcggagcttcgcaagc 8673921

                                                                           
Query: 559     ttctcgatcgagatgcccgcacgcctagctacattttggttagtaggctgctccccttcc 618
               |||||||| | |||||| || ||||| ||||| ||   ||| || || ||||||||||||
Sbjct: 8673920 ttctcgatggtgatgccggcgcgcctcgctacgttcgcgttggtgggttgctccccttcc 8673861

                                                                           
Query: 619     aagatgcactccagccttgctttccccacctttttcagacgagcatacacgctctccggc 678
               | |||||| |||| |||||| || ||||||||| ||||| | |||||||| |||||| ||
Sbjct: 8673860 atgatgcattccatccttgccttgcccacctttctcagaagcgcatacacactctcctgc 8673801

                 
Query: 679     aa 680
               ||
Sbjct: 8673800 aa 8673799

>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0087F21
          Length = 187401

 Score =  198 bits (100), Expect = 2e-47
 Identities = 175/200 (87%)
 Strand = Plus / Minus

                                                                          
Query: 235    ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
              |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 186619 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 186560

                                                                          
Query: 295    ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
              ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 186559 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 186500

                                                                          
Query: 355    tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
              ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 186499 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 186440

                                  
Query: 415    ctcatcatgatcctgtccac 434
              |||||||| |||||||||||
Sbjct: 186439 ctcatcatcatcctgtccac 186420



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                          
Query: 499    gaccaaacttgatcctgcattgatcgtggctttctggtcttcgctttgagtttcgccagc 558
              ||||| || ||||||||||| || || || || | ||| ||||||  ||| ||||| |||
Sbjct: 185891 gaccagacatgatcctgcatcgaccggggtttccgggttttcgctcggagcttcgcaagc 185832

                                                                          
Query: 559    ttctcgatcgagatgcccgcacgcctagctacattttggttagtaggctgctccccttcc 618
              |||||||| | |||||| || ||||| ||||| ||   ||| || || ||||||||||||
Sbjct: 185831 ttctcgatggtgatgccggcgcgcctcgctacgttcgcgttggtgggttgctccccttcc 185772

                                                                          
Query: 619    aagatgcactccagccttgctttccccacctttttcagacgagcatacacgctctccggc 678
              | |||||| |||| |||||| || ||||||||| ||||| | |||||||| |||||| ||
Sbjct: 185771 atgatgcattccatccttgccttgcccacctttctcagaagcgcatacacactctcctgc 185712

                
Query: 679    aa 680
              ||
Sbjct: 185711 aa 185710

>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0070J06
          Length = 142303

 Score =  198 bits (100), Expect = 2e-47
 Identities = 175/200 (87%)
 Strand = Plus / Minus

                                                                         
Query: 235   ctccgcttcagcttgtccaaggcccggttctggagctgccggatccgctccttggacaag 294
             |||| ||| ||||| ||||  ||||||||||| ||||||| ||||| |||||||||||  
Sbjct: 17687 ctcctcttgagcttctccagcgcccggttctgcagctgcctgatcctctccttggacagc 17628

                                                                         
Query: 295   ccgtacatgtcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccgg 354
             ||  ||||||| ||||| ||||| |||||||| |||||||| |||| |||||||||||||
Sbjct: 17627 ccaaacatgtccccgatgacatgtagcgtcttcggctcgccatcgtggatcccgaaccgg 17568

                                                                         
Query: 355   tgctcgacgatctccttctccctcgtgctcaggatgcccaggaactcccgcacctgctgc 414
             ||||||| ||||||||||||||| | ||||||||| |||||||| |||| ||||||||||
Sbjct: 17567 tgctcgatgatctccttctccctggggctcaggatccccaggaagtccctcacctgctgc 17508

                                 
Query: 415   ctcatcatgatcctgtccac 434
             |||||||| |||||||||||
Sbjct: 17507 ctcatcatcatcctgtccac 17488



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                         
Query: 499   gaccaaacttgatcctgcattgatcgtggctttctggtcttcgctttgagtttcgccagc 558
             ||||| || ||||||||||| || || || || | ||| ||||||  ||| ||||| |||
Sbjct: 16959 gaccagacatgatcctgcatcgaccggggtttccgggttttcgctcggagcttcgcaagc 16900

                                                                         
Query: 559   ttctcgatcgagatgcccgcacgcctagctacattttggttagtaggctgctccccttcc 618
             |||||||| | |||||| || ||||| ||||| ||   ||| || || ||||||||||||
Sbjct: 16899 ttctcgatggtgatgccggcgcgcctcgctacgttcgcgttggtgggttgctccccttcc 16840

                                                                         
Query: 619   aagatgcactccagccttgctttccccacctttttcagacgagcatacacgctctccggc 678
             | |||||| |||| |||||| || ||||||||| ||||| | |||||||| |||||| ||
Sbjct: 16839 atgatgcattccatccttgccttgcccacctttctcagaagcgcatacacactctcctgc 16780

               
Query: 679   aa 680
             ||
Sbjct: 16779 aa 16778

>gb|AF099112.1| Zea mays sigma factor SIG6 (sig6) mRNA, complete cds; nuclear gene
            for chloroplast product
          Length = 1823

 Score =  153 bits (77), Expect = 9e-34
 Identities = 166/195 (85%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                        
Query: 244  agcttgtccaaggcccggttctggagctgccggatccgctccttggacaagccgtacatg 303
            |||||||||| ||||  |||||| | ||| ||||||| ||||||||||| ||||||||||
Sbjct: 1629 agcttgtccagggccttgttctgcacctggcggatcctctccttggacaggccgtacatg 1570

                                                                        
Query: 304  tcgccgatcacatggagcgtcttgggctcgccgtcgtagatcccgaaccggtgctcgacg 363
            |||||||| ||||| || |||||||||| |||||||| ||| |||||||||||||||| |
Sbjct: 1569 tcgccgatgacatgcagggtcttgggctggccgtcgtggatgccgaaccggtgctcgatg 1510

                                                                        
Query: 364  atctccttctccctcgtgctcaggatgcc---caggaactcccgcacctgctgcctcatc 420
            |||||||||||||  | ||||||||| ||   ||||||    ||||||||||||| ||||
Sbjct: 1509 atctccttctcccgggggctcaggatccccgtcaggaagctgcgcacctgctgccgcatc 1450

                           
Query: 421  atgatcctgtccacg 435
            || | ||||||||||
Sbjct: 1449 atcagcctgtccacg 1435



 Score =  111 bits (56), Expect = 3e-21
 Identities = 203/252 (80%)
 Strand = Plus / Minus

                                                                        
Query: 454  atgttcgggtcctccgtgatctcctggaaggtgactgcgtcgttggaccaaacttgatcc 513
            ||||| |||||||| |||||||||||| | || ||  ||||||  ||||| ||| |||||
Sbjct: 1416 atgttggggtcctcggtgatctcctggtatgtcacaccgtcgtctgaccagactcgatcc 1357

                                                                        
Query: 514  tgcattgatcgtggctttctggtcttcgctttgagtttcgccagcttctcgatcgagatg 573
            ||||| || |||   || ||||| |||||| | |||||||||||||| || |||| ||||
Sbjct: 1356 tgcatggaccgtactttcctggttttcgctctcagtttcgccagcttttcaatcgtgatg 1297

                                                                        
Query: 574  cccgcacgcctagctacattttggttagtaggctgctccccttccaagatgcactccagc 633
            || |||||||| || ||    | ||| || ||||||||||| ||||  ||||| |||| |
Sbjct: 1296 ccagcacgccttgccaccacctcgttcgtcggctgctccccgtccattatgcattccatc 1237

                                                                        
Query: 634  cttgctttccccacctttttcagacgagcatacacgctctccggcaaccgaatcagtctt 693
            || ||||| ||||||||  ||| | | |||||||| |||||||||||||| || ||||||
Sbjct: 1236 ctcgctttgcccaccttcctcaaaagtgcatacacactctccggcaaccggattagtctt 1177

                        
Query: 694  gaatgcttgaag 705
            |||| |||||||
Sbjct: 1176 gaattcttgaag 1165

>ref|XM_865189.1| PREDICTED: Bos taurus similar to zinc finger, DHHC domain containing
            22 (LOC613943), mRNA
          Length = 2939

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 628  tccagccttgctttccccacc 648
            |||||||||||||||||||||
Sbjct: 1991 tccagccttgctttccccacc 1971

>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 460   gggtcctccgtgatctcctggaagg 484
             |||||||||||| ||||||||||||
Sbjct: 82073 gggtcctccgtgttctcctggaagg 82049

>gb|AC005371.1| Homo sapiens chromosome 5, BAC clone 342p15 (LBNL H189), complete
             sequence
          Length = 142600

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tgtgtttccttttgtatgaa 149
             ||||||||||||||||||||
Sbjct: 14155 tgtgtttccttttgtatgaa 14136

>gb|AC105979.13| Mus musculus chromosome 14, clone RP24-301E12, complete sequence
          Length = 163688

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 610    tccccttccaagatgcactc 629
              ||||||||||||||||||||
Sbjct: 102029 tccccttccaagatgcactc 102010

>ref|XM_417508.1| PREDICTED: Gallus gallus similar to Potential
            phospholipid-transporting ATPase IIA (LOC419345), mRNA
          Length = 10950

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  cctcgtgctcaggatgcccaggaa 398
            ||||||||||||||| ||||||||
Sbjct: 3447 cctcgtgctcaggatacccaggaa 3424

>gb|AC134898.4| Mus musculus BAC clone RP23-478H2 from chromosome 14, complete sequence
          Length = 213348

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 610   tccccttccaagatgcactc 629
             ||||||||||||||||||||
Sbjct: 25532 tccccttccaagatgcactc 25513

>ref|XM_762043.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_514_15116_17125)
            partial mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 379  gtgctcaggatgcccaggaa 398
            ||||||||||||||||||||
Sbjct: 1963 gtgctcaggatgcccaggaa 1982

>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183100

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 617   ccaagatgcactccagcctt 636
             ||||||||||||||||||||
Sbjct: 78030 ccaagatgcactccagcctt 78049

>gb|AC126283.3| Homo sapiens BAC clone RP11-602N24 from 4, complete sequence
          Length = 118642

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gtgtgttgtttgtgtttctg 20
             ||||||||||||||||||||
Sbjct: 98013 gtgtgttgtttgtgtttctg 98032

>gb|U40029.1| Caenorhabditis elegans cosmid F10G7, complete sequence
          Length = 43675

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 134   tttccttttgtatgaacaatcgaaccga 161
             |||||||||| |||||||||||| ||||
Sbjct: 23433 tttccttttggatgaacaatcgatccga 23406

>gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, complete sequence
          Length = 138824

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tgtgtttccttttgtatgaa 149
             ||||||||||||||||||||
Sbjct: 72516 tgtgtttccttttgtatgaa 72497

>ref|NM_062438.2| Caenorhabditis elegans Tudor Staphylococcal Nuclease homolog family
           member (tsn-1) (tsn-1) mRNA, complete cds
          Length = 2776

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 134 tttccttttgtatgaacaatcgaaccga 161
           |||||||||| |||||||||||| ||||
Sbjct: 879 tttccttttggatgaacaatcgatccga 852

>tpg|BK000958.1| TPA: TPA_exp: Homo sapiens peropsin (RRH) gene, exons 1 through 7 and
            complete cds
          Length = 16514

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    gtgtgttgtttgtgtttctg 20
            ||||||||||||||||||||
Sbjct: 1822 gtgtgttgtttgtgtttctg 1841

>gb|AC011243.8| Homo sapiens BAC clone RP11-491M19 from 2, complete sequence
          Length = 137269

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 616    tccaagatgcactccagcct 635
              ||||||||||||||||||||
Sbjct: 112469 tccaagatgcactccagcct 112488

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 393     caggaactcccgcacctgct 412
               ||||||||||||||||||||
Sbjct: 3316336 caggaactcccgcacctgct 3316317

>emb|Z82268.1|CEF52B11 Caenorhabditis elegans Cosmid F52B11, complete sequence
          Length = 42861

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    gtgtgttgtttgtgtttctg 20
            ||||||||||||||||||||
Sbjct: 2232 gtgtgttgtttgtgtttctg 2251

>gb|U66560.1|MAU66560 Mycobacterium avium EmbR (embR), EmbA (embA) and EmbB (embB) genes,
           complete cds
          Length = 7853

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 accggtgctcgacgatctcc 369
           ||||||||||||||||||||
Sbjct: 730 accggtgctcgacgatctcc 711

>emb|AL929017.9| Zebrafish DNA sequence from clone DKEY-4C15 in linkage group 20, complete
              sequence
          Length = 208922

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    gaccaaacttgatcctgcat 518
              ||||||||||||||||||||
Sbjct: 176678 gaccaaacttgatcctgcat 176697


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,322,870
Number of Sequences: 3902068
Number of extensions: 5322870
Number of successful extensions: 112391
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112240
Number of HSP's gapped (non-prelim): 138
length of query: 705
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 682
effective length of database: 17,143,297,704
effective search space: 11691729034128
effective search space used: 11691729034128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)