ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11f18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2279 Score = 244 bits (123), Expect = 3e-61 Identities = 321/387 (82%) Strand = Plus / Minus Query: 241 actcttttggatgcaaaatgctggcctagatggagcttggagagacacagtgctgctgct 300 ||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| Sbjct: 1965 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 1906 Query: 301 tagcatgacagtcacaactgacatcatcggtctatccgcggggtcttcttgaacacacag 360 ||||| ||| |||| | |||||||| || || |||| ||||||||||||||||||||| Sbjct: 1905 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 1846 Query: 361 aagtccgatgtgcacgcacttcagcatctggtctccaggagaatggctagtcatagatga 420 ||||||||||| |||||||||| ||||||||||||||| |||| | | ||| ||||| Sbjct: 1845 gagtccgatgtggacgcacttcaagatctggtctccaggacaatgccccgccatggatga 1786 Query: 421 atccatgatccctacaattgttcccatcgtccagtgctcccagaccaaacttaagaggtc 480 |||| | | | |||| |||||| | |||||||||||| || ||| ||||||| || Sbjct: 1785 atccgcaagctccacaactgttcctgccaaccagtgctcccacactaaagttaagagatc 1726 Query: 481 tacagcttgctcggagtcatatgcgacactgtttctttttccagtgacgatctctaaaat 540 || | |||||||||||| || | |||| ||||| | |||| |||||||| |||||||| Sbjct: 1725 aaccgattgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaat 1666 Query: 541 caagacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactc 600 || ||||| |||||||| || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 1665 cagaacgccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactc 1606 Query: 601 gggggacatgtatccataggttccgac 627 |||| |||||||||||| |||||||| Sbjct: 1605 aggggccatgtatccatatgttccgac 1579
>dbj|AK100849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123I07, full insert sequence Length = 2279 Score = 244 bits (123), Expect = 3e-61 Identities = 321/387 (82%) Strand = Plus / Minus Query: 241 actcttttggatgcaaaatgctggcctagatggagcttggagagacacagtgctgctgct 300 ||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| Sbjct: 1964 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 1905 Query: 301 tagcatgacagtcacaactgacatcatcggtctatccgcggggtcttcttgaacacacag 360 ||||| ||| |||| | |||||||| || || |||| ||||||||||||||||||||| Sbjct: 1904 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 1845 Query: 361 aagtccgatgtgcacgcacttcagcatctggtctccaggagaatggctagtcatagatga 420 ||||||||||| |||||||||| ||||||||||||||| |||| | | ||| ||||| Sbjct: 1844 gagtccgatgtggacgcacttcaagatctggtctccaggacaatgccccgccatggatga 1785 Query: 421 atccatgatccctacaattgttcccatcgtccagtgctcccagaccaaacttaagaggtc 480 |||| | | | |||| |||||| | |||||||||||| || ||| ||||||| || Sbjct: 1784 atccgcaagctccacaactgttcctgccaaccagtgctcccacactaaagttaagagatc 1725 Query: 481 tacagcttgctcggagtcatatgcgacactgtttctttttccagtgacgatctctaaaat 540 || | |||||||||||| || | |||| ||||| | |||| |||||||| |||||||| Sbjct: 1724 aaccgattgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaat 1665 Query: 541 caagacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactc 600 || ||||| |||||||| || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 1664 cagaacgccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactc 1605 Query: 601 gggggacatgtatccataggttccgac 627 |||| |||||||||||| |||||||| Sbjct: 1604 aggggccatgtatccatatgttccgac 1578
>dbj|AK111109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A05, full insert sequence Length = 770 Score = 222 bits (112), Expect = 1e-54 Identities = 319/387 (82%), Gaps = 2/387 (0%) Strand = Plus / Minus Query: 241 actcttttggatgcaaaatgctggcctagatggagcttggagagacacagtgctgctgct 300 ||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| Sbjct: 461 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 402 Query: 301 tagcatgacagtcacaactgacatcatcggtctatccgcggggtcttcttgaacacacag 360 ||||| ||| |||| | |||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 342 Query: 361 aagtccgatgtgcacgcacttcagcatctggtctccaggagaatggctagtcatagatga 420 ||||||| || |||||||||| ||||||||||||||| |||| | | ||| ||||| Sbjct: 341 gagtccga--tggacgcacttcaagatctggtctccaggacaatgccccgccatggatga 284 Query: 421 atccatgatccctacaattgttcccatcgtccagtgctcccagaccaaacttaagaggtc 480 |||| | | | |||| |||||| | |||||||||||| || ||| ||||||| || Sbjct: 283 atccgcaagctccacaactgttcctgccaaccagtgctcccacactaaagttaagagatc 224 Query: 481 tacagcttgctcggagtcatatgcgacactgtttctttttccagtgacgatctctaaaat 540 || | |||||||||||| || | |||| ||||| | |||| |||||||| |||||||| Sbjct: 223 aaccgattgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaat 164 Query: 541 caagacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactc 600 || ||||| |||||||| || || || ||||| ||||||| ||| |||||||| ||||| Sbjct: 163 cagaacgccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactc 104 Query: 601 gggggacatgtatccataggttccgac 627 |||| |||||||||||| |||||||| Sbjct: 103 aggggccatgtatccatatgttccgac 77
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 176 bits (89), Expect = 6e-41 Identities = 146/165 (88%) Strand = Plus / Minus Query: 241 actcttttggatgcaaaatgctggcctagatggagcttggagagacacagtgctgctgct 300 ||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| Sbjct: 21056034 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 21055975 Query: 301 tagcatgacagtcacaactgacatcatcggtctatccgcggggtcttcttgaacacacag 360 ||||| ||| |||| | |||||||| || || |||| ||||||||||||||||||||| Sbjct: 21055974 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 21055915 Query: 361 aagtccgatgtgcacgcacttcagcatctggtctccaggagaatg 405 ||||||||||| |||||||||| ||||||||||||||| |||| Sbjct: 21055914 gagtccgatgtggacgcacttcaagatctggtctccaggacaatg 21055870 Score = 135 bits (68), Expect = 2e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||||| ||| |||||||| ||||||||||| ||||||||| ||| Sbjct: 21071250 aaaatgatggcttggatggagattgaagagacactgtgctgctgctaagcatgacattca 21071191 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||||||| || |||| |||||||||||||| || || ||||| | Sbjct: 21071190 ctgttgacatcataggtctatctgctgggttatcttgaacacacagtagcccaatgtgaa 21071131 Query: 375 cgcacttcagcatctggtctccaggagaatggctagtcatagatgaatccatgatcccta 434 ||||| ||||||||||||| ||||| |||||| || | ||| | |||||| ||| | | Sbjct: 21071130 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 21071071 Query: 435 caattgttcccatcgtccagtgctccca 462 |||||||||||| |||||||||||||| Sbjct: 21071070 aaattgttcccatggtccagtgctccca 21071043 Score = 103 bits (52), Expect = 7e-19 Identities = 169/208 (81%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 21078803 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 21078744 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||| ||| || |||| |||||||||||||| || || ||||| | Sbjct: 21078743 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 21078684 Query: 375 cgcacttcagcatctggtctccaggagaatggctagtcatagatgaatccatgatcccta 434 ||||| ||||||||||||| ||||| |||||| || | ||| | |||||| ||| | | Sbjct: 21078683 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 21078624 Query: 435 caattgttcccatcgtccagtgctccca 462 |||||||||||| |||||||||||||| Sbjct: 21078623 aaattgttcccatggtccagtgctccca 21078596 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | || |||||||| |||| |||| |||||||| | ||| |||||||||||| Sbjct: 21326972 tcatatgagccagtgtttcttcttccggtgataatctctaataccaaaacgccgaagctg 21326913 Query: 557 aacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||||||||||| ||||| || ||||| ||||||||||| || || || | |||||||||| Sbjct: 21326912 aacacgtccgatttgattgaataattaccacgcatagcgtattctggtgccatgtatcca 21326853 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 487 ttgctcggagtcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagac 546 |||||||||||| || | |||| ||||| | |||| |||||||| |||||||||| || Sbjct: 21055686 ttgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaatcagaac 21055627 Query: 547 gccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggggga 606 ||| |||||||| || || || ||||| ||||||| ||| |||||||| ||||| |||| Sbjct: 21055626 gccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactcaggggc 21055567 Query: 607 catgtatcca 616 |||||||||| Sbjct: 21055566 catgtatcca 21055557 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| | || |||| ||||||||||| || ||| || ||||| |||||||| ||||| Sbjct: 21342530 gtttcttctccctgtgatgatctctaaaaccaggacaccaaagctaaacacgtctgactt 21342589 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||| || || | |||||||| |||||||| || |||||||||||| Sbjct: 21342590 gattgaatattgtccacgcattgcatactctggtgacatgtatcca 21342635 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 127 ttatctcggctcaagctcagtaatcgaaacttcgtttggtgacataggtgatct 180 |||||| |||||||||||||| |||||||| || |||||||||||||| ||||| Sbjct: 21056754 ttatcttggctcaagctcagtgatcgaaacctcatttggtgacataggcgatct 21056701 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 524 gtgacgatctctaaaatcaagacgccgaagctgaacacgtccgacttgatagagtaattc 583 ||||||||||| | | || ||||||||||||||||||||| ||||| | ||||| | | Sbjct: 21242394 gtgacgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgc 21242453 Query: 584 ccacgcatagcatactcgggggacatgtatcca 616 |||||||| || ||||| || | |||||||||| Sbjct: 21242454 ccacgcatcgcgtactctggcgccatgtatcca 21242486 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacg 588 ||||||||||||||| ||||| ||||||| |||||| |||||||| Sbjct: 21116353 gacgccgaagctgaatacgtctgacttgacagagtagttcccacg 21116309 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggg 603 ||||||||||||||||||||| ||||||| ||||| || || ||||| ||||| || || Sbjct: 21080357 gacgccgaagctgaacacgtcggacttgagggagtagttgcctcgcatcgcatattccgg 21080416 Query: 604 ggacatgta 612 |||||||| Sbjct: 21080417 tgacatgta 21080425 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | |||| |||||| |||||||||||||||||| | ||| |||||||| || Sbjct: 21299920 tcatatgagccactatttcttcttccagtgacgatctctagtaccaaaacgccgaaacta 21299979 Query: 557 aacacgtccgacttga 572 || |||||| |||||| Sbjct: 21299980 aatacgtccaacttga 21299995 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 21102483 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 21102530 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||| ||||||| Sbjct: 20995578 acgccgaagctgaacacgtcggacttga 20995551 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Plus Query: 509 ctgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgac 568 |||||||| |||| ||||| ||||||| |||| || ||||| |||||| |||||||| Sbjct: 21315310 ctgtttctccttcccgtgacaatctctaggatcataactccgaaactgaacgcgtccgac 21315369 Query: 569 ttgatagagtaattcccacgcatagcatactcgggggacatgtatcc 615 |||| || || | ||||||||| || ||||| || | ||||||||| Sbjct: 21315370 ttgactgaatactgcccacgcatggcgtactccggcgccatgtatcc 21315416 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 21793411 acgccgaagctgaacacgtcggactt 21793436 Score = 44.1 bits (22), Expect = 0.55 Identities = 85/106 (80%) Strand = Plus / Plus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| |||| |||| ||||||||||| || ||| ||||| || ||||||| |||| Sbjct: 21331916 gtttcttcttcctgtgatgatctctaaaaccaggacaccgaaactatacacgtctaactt 21331975 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 || || || | || ||||| |||||||| || |||||||||||| Sbjct: 21331976 cattgaatattgtccgcgcatcgcatactctggagacatgtatcca 21332021 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 |||||||||||| ||||| ||||| |||||||| Sbjct: 20907980 caagacgccgaaactgaagacgtctgacttgat 20907948 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 ||||||||| || ||||| |||||||||||||| Sbjct: 7401724 caagacgccaaaactgaagacgtccgacttgat 7401692
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 176 bits (89), Expect = 6e-41 Identities = 146/165 (88%) Strand = Plus / Minus Query: 241 actcttttggatgcaaaatgctggcctagatggagcttggagagacacagtgctgctgct 300 ||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| Sbjct: 99333 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 99274 Query: 301 tagcatgacagtcacaactgacatcatcggtctatccgcggggtcttcttgaacacacag 360 ||||| ||| |||| | |||||||| || || |||| ||||||||||||||||||||| Sbjct: 99273 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 99214 Query: 361 aagtccgatgtgcacgcacttcagcatctggtctccaggagaatg 405 ||||||||||| |||||||||| ||||||||||||||| |||| Sbjct: 99213 gagtccgatgtggacgcacttcaagatctggtctccaggacaatg 99169 Score = 135 bits (68), Expect = 2e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||||| ||| |||||||| ||||||||||| ||||||||| ||| Sbjct: 114549 aaaatgatggcttggatggagattgaagagacactgtgctgctgctaagcatgacattca 114490 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||||||| || |||| |||||||||||||| || || ||||| | Sbjct: 114489 ctgttgacatcataggtctatctgctgggttatcttgaacacacagtagcccaatgtgaa 114430 Query: 375 cgcacttcagcatctggtctccaggagaatggctagtcatagatgaatccatgatcccta 434 ||||| ||||||||||||| ||||| |||||| || | ||| | |||||| ||| | | Sbjct: 114429 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 114370 Query: 435 caattgttcccatcgtccagtgctccca 462 |||||||||||| |||||||||||||| Sbjct: 114369 aaattgttcccatggtccagtgctccca 114342 Score = 103 bits (52), Expect = 7e-19 Identities = 169/208 (81%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 122102 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 122043 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||| ||| || |||| |||||||||||||| || || ||||| | Sbjct: 122042 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 121983 Query: 375 cgcacttcagcatctggtctccaggagaatggctagtcatagatgaatccatgatcccta 434 ||||| ||||||||||||| ||||| |||||| || | ||| | |||||| ||| | | Sbjct: 121982 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 121923 Query: 435 caattgttcccatcgtccagtgctccca 462 |||||||||||| |||||||||||||| Sbjct: 121922 aaattgttcccatggtccagtgctccca 121895 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Minus Query: 487 ttgctcggagtcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagac 546 |||||||||||| || | |||| ||||| | |||| |||||||| |||||||||| || Sbjct: 98985 ttgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaatcagaac 98926 Query: 547 gccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggggga 606 ||| |||||||| || || || ||||| ||||||| ||| |||||||| ||||| |||| Sbjct: 98925 gccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactcaggggc 98866 Query: 607 catgtatcca 616 |||||||||| Sbjct: 98865 catgtatcca 98856 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 127 ttatctcggctcaagctcagtaatcgaaacttcgtttggtgacataggtgatct 180 |||||| |||||||||||||| |||||||| || |||||||||||||| ||||| Sbjct: 100053 ttatcttggctcaagctcagtgatcgaaacctcatttggtgacataggcgatct 100000 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggg 603 ||||||||||||||||||||| ||||||| ||||| || || ||||| ||||| || || Sbjct: 123656 gacgccgaagctgaacacgtcggacttgagggagtagttgcctcgcatcgcatattccgg 123715 Query: 604 ggacatgta 612 |||||||| Sbjct: 123716 tgacatgta 123724 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 145782 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 145829 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||| ||||||| Sbjct: 38877 acgccgaagctgaacacgtcggacttga 38850
>ref|NM_185884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2088 Score = 135 bits (68), Expect = 2e-28 Identities = 173/208 (83%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||||| ||| |||||||| ||||||||||| ||||||||| ||| Sbjct: 1951 aaaatgatggcttggatggagattgaagagacactgtgctgctgctaagcatgacattca 1892 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||||||| || |||| |||||||||||||| || || ||||| | Sbjct: 1891 ctgttgacatcataggtctatctgctgggttatcttgaacacacagtagcccaatgtgaa 1832 Query: 375 cgcacttcagcatctggtctccaggagaatggctagtcatagatgaatccatgatcccta 434 ||||| ||||||||||||| ||||| |||||| || | ||| | |||||| ||| | | Sbjct: 1831 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 1772 Query: 435 caattgttcccatcgtccagtgctccca 462 |||||||||||| |||||||||||||| Sbjct: 1771 aaattgttcccatggtccagtgctccca 1744
>ref|NM_185885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 103 bits (52), Expect = 7e-19 Identities = 169/208 (81%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 1894 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 1835 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||| ||| || |||| |||||||||||||| || || ||||| | Sbjct: 1834 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 1775 Query: 375 cgcacttcagcatctggtctccaggagaatggctagtcatagatgaatccatgatcccta 434 ||||| ||||||||||||| ||||| |||||| || | ||| | |||||| ||| | | Sbjct: 1774 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 1715 Query: 435 caattgttcccatcgtccagtgctccca 462 |||||||||||| |||||||||||||| Sbjct: 1714 aaattgttcccatggtccagtgctccca 1687
>ref|XM_478592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2109 Score = 97.6 bits (49), Expect = 4e-17 Identities = 109/129 (84%) Strand = Plus / Minus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | || |||||||| |||| |||| |||||||| | ||| |||||||||||| Sbjct: 1727 tcatatgagccagtgtttcttcttccggtgataatctctaataccaaaacgccgaagctg 1668 Query: 557 aacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||||||||||| ||||| || ||||| ||||||||||| || || || | |||||||||| Sbjct: 1667 aacacgtccgatttgattgaataattaccacgcatagcgtattctggtgccatgtatcca 1608 Query: 617 taggttccg 625 || |||||| Sbjct: 1607 tatgttccg 1599
>dbj|AK111650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130K01, full insert sequence Length = 2340 Score = 97.6 bits (49), Expect = 4e-17 Identities = 109/129 (84%) Strand = Plus / Minus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | || |||||||| |||| |||| |||||||| | ||| |||||||||||| Sbjct: 1747 tcatatgagccagtgtttcttcttccggtgataatctctaataccaaaacgccgaagctg 1688 Query: 557 aacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||||||||||| ||||| || ||||| ||||||||||| || || || | |||||||||| Sbjct: 1687 aacacgtccgatttgattgaataattaccacgcatagcgtattctggtgccatgtatcca 1628 Query: 617 taggttccg 625 || |||||| Sbjct: 1627 tatgttccg 1619
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | || |||||||| |||| |||| |||||||| | ||| |||||||||||| Sbjct: 47140 tcatatgagccagtgtttcttcttccggtgataatctctaataccaaaacgccgaagctg 47081 Query: 557 aacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||||||||||| ||||| || ||||| ||||||||||| || || || | |||||||||| Sbjct: 47080 aacacgtccgatttgattgaataattaccacgcatagcgtattctggtgccatgtatcca 47021 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| | || |||| ||||||||||| || ||| || ||||| |||||||| ||||| Sbjct: 62698 gtttcttctccctgtgatgatctctaaaaccaggacaccaaagctaaacacgtctgactt 62757 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||| || || | |||||||| |||||||| || |||||||||||| Sbjct: 62758 gattgaatattgtccacgcattgcatactctggtgacatgtatcca 62803 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | |||| |||||| |||||||||||||||||| | ||| |||||||| || Sbjct: 20088 tcatatgagccactatttcttcttccagtgacgatctctagtaccaaaacgccgaaacta 20147 Query: 557 aacacgtccgacttga 572 || |||||| |||||| Sbjct: 20148 aatacgtccaacttga 20163 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Plus Query: 509 ctgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgac 568 |||||||| |||| ||||| ||||||| |||| || ||||| |||||| |||||||| Sbjct: 35478 ctgtttctccttcccgtgacaatctctaggatcataactccgaaactgaacgcgtccgac 35537 Query: 569 ttgatagagtaattcccacgcatagcatactcgggggacatgtatcc 615 |||| || || | ||||||||| || ||||| || | ||||||||| Sbjct: 35538 ttgactgaatactgcccacgcatggcgtactccggcgccatgtatcc 35584 Score = 44.1 bits (22), Expect = 0.55 Identities = 85/106 (80%) Strand = Plus / Plus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| |||| |||| ||||||||||| || ||| ||||| || ||||||| |||| Sbjct: 52084 gtttcttcttcctgtgatgatctctaaaaccaggacaccgaaactatacacgtctaactt 52143 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 || || || | || ||||| |||||||| || |||||||||||| Sbjct: 52144 cattgaatattgtccgcgcatcgcatactctggagacatgtatcca 52189
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Minus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | || |||||||| |||| |||| |||||||| | ||| |||||||||||| Sbjct: 113257 tcatatgagccagtgtttcttcttccggtgataatctctaataccaaaacgccgaagctg 113198 Query: 557 aacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||||||||||| ||||| || ||||| ||||||||||| || || || | |||||||||| Sbjct: 113197 aacacgtccgatttgattgaataattaccacgcatagcgtattctggtgccatgtatcca 113138 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| | || |||| ||||||||||| || ||| || ||||| |||||||| ||||| Sbjct: 128815 gtttcttctccctgtgatgatctctaaaaccaggacaccaaagctaaacacgtctgactt 128874 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 ||| || || | |||||||| |||||||| || |||||||||||| Sbjct: 128875 gattgaatattgtccacgcattgcatactctggtgacatgtatcca 128920 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 524 gtgacgatctctaaaatcaagacgccgaagctgaacacgtccgacttgatagagtaattc 583 ||||||||||| | | || ||||||||||||||||||||| ||||| | ||||| | | Sbjct: 28679 gtgacgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgc 28738 Query: 584 ccacgcatagcatactcgggggacatgtatcca 616 |||||||| || ||||| || | |||||||||| Sbjct: 28739 ccacgcatcgcgtactctggcgccatgtatcca 28771 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | |||| |||||| |||||||||||||||||| | ||| |||||||| || Sbjct: 86205 tcatatgagccactatttcttcttccagtgacgatctctagtaccaaaacgccgaaacta 86264 Query: 557 aacacgtccgacttga 572 || |||||| |||||| Sbjct: 86265 aatacgtccaacttga 86280 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Plus Query: 509 ctgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgac 568 |||||||| |||| ||||| ||||||| |||| || ||||| |||||| |||||||| Sbjct: 101595 ctgtttctccttcccgtgacaatctctaggatcataactccgaaactgaacgcgtccgac 101654 Query: 569 ttgatagagtaattcccacgcatagcatactcgggggacatgtatcc 615 |||| || || | ||||||||| || ||||| || | ||||||||| Sbjct: 101655 ttgactgaatactgcccacgcatggcgtactccggcgccatgtatcc 101701 Score = 44.1 bits (22), Expect = 0.55 Identities = 85/106 (80%) Strand = Plus / Plus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| |||| |||| ||||||||||| || ||| ||||| || ||||||| |||| Sbjct: 118201 gtttcttcttcctgtgatgatctctaaaaccaggacaccgaaactatacacgtctaactt 118260 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 || || || | || ||||| |||||||| || |||||||||||| Sbjct: 118261 cattgaatattgtccgcgcatcgcatactctggagacatgtatcca 118306
>dbj|D21298.1|RICSS258 Oryza sativa SS258 mRNA for receptor protein kinase, partial sequence Length = 403 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 348 cttgaacacacagaagtccgatgtgcacgcacttcagcatctggtctccaggagaatggc 407 ||||||||||||| || || ||||| | ||||| ||||||||||||| ||||| ||||| Sbjct: 304 cttgaacacacagtagcccaatgtgaatacacttgagcatctggtctcgaggagcatggc 245 Query: 408 tagtcatagatgaatccatgatccctacaattgttcccatcgtccagtgctccca 462 | || | ||| | |||||| ||| | | |||||||||||| |||||||||||||| Sbjct: 244 ttgtaagagagggatccatcatctccaaaattgttcccatggtccagtgctccca 190
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 75.8 bits (38), Expect = 2e-10 Identities = 125/154 (81%) Strand = Plus / Minus Query: 255 aaaatgctggcctagatggagcttggagagacacagtgctgctgcttagcatgacagtca 314 |||||| |||| | ||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 164 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 105 Query: 315 caactgacatcatcggtctatccgcggggtcttcttgaacacacagaagtccgatgtgca 374 | ||||||||| |||| ||| || |||| |||||||||||||| || || ||||| | Sbjct: 104 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 45 Query: 375 cgcacttcagcatctggtctccaggagaatggct 408 ||||| ||||||||||||| ||||| |||||| Sbjct: 44 tacacttgagcatctggtctcgaggagcatggct 11 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 524 gtgacgatctctaaaatcaagacgccgaagctgaacacgtccgacttgatagagtaattc 583 ||||||||||| | | || ||||||||||||||||||||| ||||| | ||||| | | Sbjct: 163755 gtgacgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgc 163814 Query: 584 ccacgcatagcatactcgggggacatgtatcca 616 |||||||| || ||||| || | |||||||||| Sbjct: 163815 ccacgcatcgcgtactctggcgccatgtatcca 163847 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacg 588 ||||||||||||||| ||||| ||||||| |||||| |||||||| Sbjct: 37714 gacgccgaagctgaatacgtctgacttgacagagtagttcccacg 37670 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggg 603 ||||||||||||||||||||| ||||||| ||||| || || ||||| ||||| || || Sbjct: 1718 gacgccgaagctgaacacgtcggacttgagggagtagttgcctcgcatcgcatattccgg 1777 Query: 604 ggacatgta 612 |||||||| Sbjct: 1778 tgacatgta 1786 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 23844 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 23891
>ref|XM_478596.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| | || |||| ||||||||||| || ||| || ||||| |||||||| ||||| Sbjct: 1605 gtttcttctccctgtgatgatctctaaaaccaggacaccaaagctaaacacgtctgactt 1546 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatccata 618 ||| || || | |||||||| |||||||| || |||||||||||||| Sbjct: 1545 gattgaatattgtccacgcattgcatactctggtgacatgtatccata 1498
>ref|XM_478577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2439 Score = 63.9 bits (32), Expect = 6e-07 Identities = 86/104 (82%) Strand = Plus / Minus Query: 524 gtgacgatctctaaaatcaagacgccgaagctgaacacgtccgacttgatagagtaattc 583 ||||||||||| | | || ||||||||||||||||||||| ||||| | ||||| | | Sbjct: 1768 gtgacgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgc 1709 Query: 584 ccacgcatagcatactcgggggacatgtatccataggttccgac 627 |||||||| || ||||| || | |||||||||||| || ||||| Sbjct: 1708 ccacgcatcgcgtactctggcgccatgtatccatatgtcccgac 1665
>dbj|AK101714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060N20, full insert sequence Length = 2438 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggg 603 ||||||||||||||||||||| ||||| | ||||| | ||||||||| || ||||| || Sbjct: 1747 gacgccgaagctgaacacgtctgacttaacggagtagtgcccacgcatcgcgtactctgg 1688 Query: 604 ggacatgtatccataggttccgac 627 | |||||||||||| || ||||| Sbjct: 1687 cgccatgtatccatatgtcccgac 1664
>ref|NM_185886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggg 603 ||||||||||||||||||||| ||||||| ||||| || || ||||| ||||| || || Sbjct: 1491 gacgccgaagctgaacacgtcggacttgagggagtagttgcctcgcatcgcatattccgg 1432 Query: 604 ggacatgtatccata 618 |||||||| ||||| Sbjct: 1431 tgacatgtacccata 1417
>dbj|AK111734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041L05, full insert sequence Length = 2148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcatagcatactcggg 603 ||||||||||||||||||||| ||||||| ||||| || || ||||| ||||| || || Sbjct: 1643 gacgccgaagctgaacacgtcggacttgagggagtagttgcctcgcatcgcatattccgg 1584 Query: 604 ggacatgtatccata 618 |||||||| ||||| Sbjct: 1583 tgacatgtacccata 1569
>ref|XM_478587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Minus Query: 497 tcatatgcgacactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctg 556 ||||||| | |||| |||||| |||||||||||||||||| | ||| |||||||| || Sbjct: 1712 tcatatgagccactatttcttcttccagtgacgatctctagtaccaaaacgccgaaacta 1653 Query: 557 aacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgtatcca 616 || |||||| |||||| || |||| ||| |||| || || || || | |||||||||| Sbjct: 1652 aatacgtccaacttgactgaataatgaccatgcatggcgtattcaggcgccatgtatcca 1593 Query: 617 taggttccg 625 || |||||| Sbjct: 1592 tatgttccg 1584
>ref|XM_478556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1917 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacg 588 ||||||||||||||| ||||| ||||||| |||||| |||||||| Sbjct: 1548 gacgccgaagctgaatacgtctgacttgacagagtagttcccacg 1504
>ref|XM_463825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1914 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 1423 acgccgaagctgaacacgtccgacttga 1396
>ref|XM_463826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2277 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 1696 acgccgaagctgaacacgtccgacttga 1669
>ref|XM_463824.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 1360 acgccgaagctgaacacgtccgacttga 1333
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 566670 acgccgaagctgaacacgtccgacttga 566697 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 29538894 cgccgaagccgaacacgtccgact 29538917 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 29534926 cgccgaagccgaacacgtccgact 29534949
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 44723 acgccgaagctgaacacgtccgacttga 44750
>dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A22, full insert sequence Length = 2277 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 1696 acgccgaagctgaacacgtccgacttga 1669
>dbj|AK069727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K11, full insert sequence Length = 1940 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 1360 acgccgaagctgaacacgtccgacttga 1333
>dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E02, full insert sequence Length = 1914 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||||||||||| Sbjct: 1423 acgccgaagctgaacacgtccgacttga 1396
>ref|NM_116561.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar binding AT4G03230 mRNA, complete cds Length = 2559 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 592 agcatactcgggggacatgtatccataggttcc 624 ||||||||| || |||||||||||||||||||| Sbjct: 2118 agcatactctggagacatgtatccataggttcc 2086
>ref|NM_101014.2| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> AT1G11410 mRNA, complete cds Length = 2671 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttccgacga 629 |||||||| || |||||||||||||| |||||||||| Sbjct: 2075 gcatactctggtgacatgtatccatatgttccgacga 2039
>dbj|AK112096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H06, full insert sequence Length = 1304 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacg 588 ||||||||||||||| ||||| ||||||| ||||| |||||||| Sbjct: 661 gacgccgaagctgaatacgtctgacttgacggagtagttcccacg 617
>dbj|AK105128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-E07, full insert sequence Length = 866 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| | || |||| ||||||||||| || ||| || ||||| |||||||| ||||| Sbjct: 381 gtttcttctccctgtgatgatctctaaaaccaggacaccaaagctaaacacgtctgactt 322 Query: 571 gatagagtaattcccacgcatagcatact 599 ||| || || | |||||||| ||||||| Sbjct: 321 gattgaatattgtccacgcattgcatact 293
>ref|NM_118456.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G23270 mRNA, complete cds Length = 2099 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||||||||| |||||||||||||| ||||| Sbjct: 1529 gcatactcgggagacatgtatccataagttcc 1498
>ref|NM_118460.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G23310 mRNA, complete cds Length = 2493 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 589 catagcatactcgggggacatgtatccataggttcc 624 ||||||||||||||| | |||||| ||||||||||| Sbjct: 2049 catagcatactcgggagccatgtaaccataggttcc 2014
>ref|NM_179094.1| Arabidopsis thaliana CRK5 (CYSTEINE-RICH RLK5) AT4G23130 (CRK5) transcript variant AT4G23130.2 mRNA, complete cds Length = 2023 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||||||||| |||||||| ||||||||||| Sbjct: 1553 gcatactcgggagacatgtaaccataggttcc 1522
>ref|NM_118442.3| Arabidopsis thaliana CRK5 (CYSTEINE-RICH RLK5); kinase AT4G23130 (CRK5) transcript variant AT4G23130.1 mRNA, complete cds Length = 2127 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||||||||| |||||||| ||||||||||| Sbjct: 1541 gcatactcgggagacatgtaaccataggttcc 1510
>ref|XM_478594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1932 Score = 48.1 bits (24), Expect = 0.035 Identities = 87/108 (80%) Strand = Plus / Minus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| |||| |||| ||||||||||| || ||| ||||| || ||||||| |||| Sbjct: 1641 gtttcttcttcctgtgatgatctctaaaaccaggacaccgaaactatacacgtctaactt 1582 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatccata 618 || || || | || ||||| |||||||| || |||||||||||||| Sbjct: 1581 cattgaatattgtccgcgcatcgcatactctggagacatgtatccata 1534
>ref|XM_478590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 48.1 bits (24), Expect = 0.035 Identities = 93/116 (80%) Strand = Plus / Minus Query: 509 ctgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgac 568 |||||||| |||| ||||| ||||||| |||| || ||||| |||||| |||||||| Sbjct: 1715 ctgtttctccttcccgtgacaatctctaggatcataactccgaaactgaacgcgtccgac 1656 Query: 569 ttgatagagtaattcccacgcatagcatactcgggggacatgtatccataggttcc 624 |||| || || | ||||||||| || ||||| || | ||||||||| || ||||| Sbjct: 1655 ttgactgaatactgcccacgcatggcgtactccggcgccatgtatccgtatgttcc 1600 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 gtccagtgctcccagaccaaacttaagaggtc 480 ||||||||||||||||| | ||| |||||||| Sbjct: 1775 gtccagtgctcccagacaagactcaagaggtc 1744
>ref|XM_478554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2253 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 1760 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 1713
>ref|XM_506393.1| PREDICTED Oryza sativa (japonica cultivar-group), P0696F12.4 mRNA Length = 2383 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 1890 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 1843
>gb|AY142496.1| Arabidopsis thaliana putative protein kinase (At4g23130) mRNA, complete cds Length = 2023 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||||||||| |||||||| ||||||||||| Sbjct: 1553 gcatactcgggagacatgtaaccataggttcc 1522
>gb|AF224707.1|AF224707 Arabidopsis thaliana receptor-like protein kinase 6 (RLK6) mRNA, complete cds Length = 2146 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||||||||| |||||||| ||||||||||| Sbjct: 1541 gcatactcgggagacatgtaaccataggttcc 1510
>dbj|AK118799.1| Arabidopsis thaliana At4g23270 mRNA for putative serine/threonine kinase, complete cds, clone: RAFL21-13-G14 Length = 2117 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||||||||| |||||||||||||| ||||| Sbjct: 1547 gcatactcgggagacatgtatccataagttcc 1516
>dbj|AK111550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058C07, full insert sequence Length = 2305 Score = 48.1 bits (24), Expect = 0.035 Identities = 87/108 (80%) Strand = Plus / Minus Query: 511 gtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgactt 570 ||||||| |||| |||| ||||||||||| || ||| ||||| || ||||||| |||| Sbjct: 1689 gtttcttcttcctgtgatgatctctaaaaccaggacaccgaaactatacacgtctaactt 1630 Query: 571 gatagagtaattcccacgcatagcatactcgggggacatgtatccata 618 || || || | || ||||| |||||||| || |||||||||||||| Sbjct: 1629 cattgaatattgtccgcgcatcgcatactctggagacatgtatccata 1582
>dbj|AK110461.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F11, full insert sequence Length = 2096 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgacttga 572 |||||||||||||||||||| ||||||| Sbjct: 1856 acgccgaagctgaacacgtcggacttga 1829
>dbj|AK103518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131H17, full insert sequence Length = 2383 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 1890 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 1843
>dbj|AK102249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088G15, full insert sequence Length = 2253 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgacttgatagagtaattcccacgcat 591 |||||||||||||||| |||| ||||||| ||||| || |||||||| Sbjct: 1760 gacgccgaagctgaacgcgtctgacttgacggagtagttgccacgcat 1713
>gb|AY104842.1| Zea mays PCO145111 mRNA sequence Length = 877 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 552 agctgaacacgtccgacttgatagagtaattcccacgcatagcatactcgggggacatgt 611 ||||||||||||||||||||| |||| | ||||| ||| || ||||| || ||||||| Sbjct: 591 agctgaacacgtccgacttgacagagaagatcccatccattgcgtactccggagacatgt 532 Query: 612 atccata 618 | ||||| Sbjct: 531 aaccata 525
>ref|NM_118447.2| Arabidopsis thaliana CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G23180 (CRK10) mRNA, complete cds Length = 2185 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 588 gcatagcatactcgggggacatgtatccataggt 621 |||| ||||||||||| |||||||| |||||||| Sbjct: 1604 gcattgcatactcgggagacatgtaaccataggt 1571
>ref|NM_191518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2571 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttccga 626 |||||||| ||||||||||| ||||| ||||||| Sbjct: 2147 gcatactccggggacatgtagccatatgttccga 2114
>ref|XM_463461.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2091 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 1650 gacgccgaagctgtacacgtccgact 1625
>ref|XM_479226.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2013 Score = 44.1 bits (22), Expect = 0.55 Identities = 94/118 (79%) Strand = Plus / Minus Query: 507 cactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccg 566 |||||||| || |||| |||| |||||| |||| ||| || ||||||||| | ||||| | Sbjct: 1621 cactgttttttcttcctgtgatgatctccaaaagcaacacaccgaagctgtatacgtcag 1562 Query: 567 acttgatagagtaattcccacgcatagcatactcgggggacatgtatccataggttcc 624 |||| || || || | |||||| | ||| || || || | |||||||||||| ||||| Sbjct: 1561 actttattgaatattgcccacgtaaagcgtattctggtgccatgtatccataagttcc 1504
>ref|XM_478647.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2583 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 2180 acgccgaagctgaacacgtcggactt 2155
>gb|AF083790.1| Arabidopsis thaliana clone sps866 unknown mRNA Length = 2197 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 588 gcatagcatactcgggggacatgtatccataggt 621 |||| ||||||||||| |||||||| |||||||| Sbjct: 1554 gcattgcatactcgggagacatgtaaccataggt 1521
>gb|AF224705.1|AF224705 Arabidopsis thaliana receptor-like protein kinase 4 (RLK4) mRNA, complete cds Length = 2070 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 588 gcatagcatactcgggggacatgtatccataggt 621 |||| ||||||||||| |||||||| |||||||| Sbjct: 1540 gcattgcatactcgggagacatgtaaccataggt 1507
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 25629516 gacgccgaagctgtacacgtccgact 25629491
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 17162160 acgccgaagctgaacacgtcagactt 17162135
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 32991755 gacgccgaagctgtacacgtccgact 32991730 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtc 564 ||||||||||||||||||||| Sbjct: 9191929 gacgccgaagctgaacacgtc 9191909
>gb|BT005954.1| Arabidopsis thaliana At4g23180 gene, complete cds Length = 2010 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 588 gcatagcatactcgggggacatgtatccataggt 621 |||| ||||||||||| |||||||| |||||||| Sbjct: 1570 gcattgcatactcgggagacatgtaaccataggt 1537
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 110594 acgccgaagctgaacacgtcggactt 110619
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 57983 gacgccgaagctgtacacgtccgact 57958
>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036C11 Length = 137995 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 10887 acgccgaagctgaacacgtcagactt 10862
>dbj|AK117765.1| Arabidopsis thaliana At4g23180 mRNA for putative receptor-like protein kinase 4 (RLK4), complete cds, clone: RAFL17-45-D12 Length = 2117 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 588 gcatagcatactcgggggacatgtatccataggt 621 |||| ||||||||||| |||||||| |||||||| Sbjct: 1604 gcattgcatactcgggagacatgtaaccataggt 1571
>dbj|AK121676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068N04, full insert sequence Length = 2415 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 1737 gacgccgaagctgtacacgtccgact 1712
>dbj|AK111594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C19, full insert sequence Length = 2366 Score = 44.1 bits (22), Expect = 0.55 Identities = 94/118 (79%) Strand = Plus / Minus Query: 507 cactgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccg 566 |||||||| || |||| |||| |||||| |||| ||| || ||||||||| | ||||| | Sbjct: 1743 cactgttttttcttcctgtgatgatctccaaaagcaacacaccgaagctgtatacgtcag 1684 Query: 567 acttgatagagtaattcccacgcatagcatactcgggggacatgtatccataggttcc 624 |||| || || || | |||||| | ||| || || || | |||||||||||| ||||| Sbjct: 1683 actttattgaatattgcccacgtaaagcgtattctggtgccatgtatccataagttcc 1626
>dbj|AK105608.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B02, full insert sequence Length = 1743 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 1045 acgccgaagctgaacacgtcagactt 1020
>dbj|AK069969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038O14, full insert sequence Length = 1691 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 987 acgccgaagctgaacacgtcagactt 962
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 acgccgaagctgaacacgtccgactt 570 |||||||||||||||||||| ||||| Sbjct: 7087 acgccgaagctgaacacgtcggactt 7112
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 25557692 gacgccgaagctgtacacgtccgact 25557667
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 gacgccgaagctgaacacgtccgact 569 ||||||||||||| |||||||||||| Sbjct: 44202 gacgccgaagctgtacacgtccgact 44227
>ref|NM_105253.1| Arabidopsis thaliana ARK2; kinase AT1G65800 (ARK2) mRNA, complete cds Length = 2781 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 510 tgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgact 569 |||||||||||||| | | ||||||| || |||||| || |||||||| || ||||||| Sbjct: 2218 tgtttctttttccacttataatctctagaagcaagaccccaaagctgaaaacatccgact 2159 Query: 570 t 570 | Sbjct: 2158 t 2158
>ref|NM_105252.1| Arabidopsis thaliana ARK1 (A. THALIANA RECEPTOR KINASE I); kinase AT1G65790 (ARK1) mRNA, complete cds Length = 2532 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 510 tgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgact 569 |||||||||||||| | | ||||||| || |||||| || |||||||| || ||||||| Sbjct: 2161 tgtttctttttccacttataatctctagaagcaagaccccaaagctgaaaacatccgact 2102 Query: 570 t 570 | Sbjct: 2101 t 2101
>ref|NM_188024.1| Oryza sativa (japonica cultivar-group), Ozsa8444 predicted mRNA Length = 1152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtc 564 ||||||||||||||||||||| Sbjct: 681 gacgccgaagctgaacacgtc 661
>ref|XM_477200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 ||||||||| || ||||| |||||||||||||| Sbjct: 1518 caagacgccaaaactgaagacgtccgacttgat 1486
>gb|AY045777.1| Arabidopsis thaliana At1g65800 mRNA sequence Length = 2796 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 510 tgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgact 569 |||||||||||||| | | ||||||| || |||||| || |||||||| || ||||||| Sbjct: 2218 tgtttctttttccacttataatctctagaagcaagaccccaaagctgaaaacatccgact 2159 Query: 570 t 570 | Sbjct: 2158 t 2158
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgact 569 |||||||||||| |||||||||||| Sbjct: 10357664 acgccgaagctgtacacgtccgact 10357640
>gb|AC007234.3|AC007234 Genomic sequence for Arabidopsis thaliana BAC F1E22, complete sequence Length = 92356 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 510 tgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgact 569 |||||||||||||| | | ||||||| || |||||| || |||||||| || ||||||| Sbjct: 73581 tgtttctttttccacttataatctctagaagcaagaccccaaagctgaaaacatccgact 73522 Query: 570 t 570 | Sbjct: 73521 t 73521 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 510 tgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgact 569 |||||||||||||| | | ||||||| || |||||| || |||||||| || ||||||| Sbjct: 69387 tgtttctttttccacttataatctctagaagcaagaccccaaagctgaaaacatccgact 69328 Query: 570 t 570 | Sbjct: 69327 t 69327
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gacgccgaagctgaacacgtc 564 ||||||||||||||||||||| Sbjct: 92311 gacgccgaagctgaacacgtc 92291
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 |||||||||||| ||||| ||||| |||||||| Sbjct: 118770 caagacgccgaaactgaagacgtctgacttgat 118738
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtccgact 569 |||||||||||| |||||||||||| Sbjct: 65369 acgccgaagctgtacacgtccgact 65345
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 ||||||||| || ||||| |||||||||||||| Sbjct: 128405 caagacgccaaaactgaagacgtccgacttgat 128373
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 |||||||||||| ||||| ||||| |||||||| Sbjct: 35895 caagacgccgaaactgaagacgtctgacttgat 35863
>emb|AJ234710.1|HVU234710 Hordeum vulgare genomic DNA fragment; clone MWG2021.rev Length = 461 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 547 gccgaagctgaacacgtccgacttg 571 |||||| |||||||||||||||||| Sbjct: 253 gccgaaactgaacacgtccgacttg 277
>dbj|AK072564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134B04, full insert sequence Length = 2077 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 541 caagacgccgaagctgaacacgtccgacttgat 573 |||||||||||| ||||| ||||| |||||||| Sbjct: 1499 caagacgccgaaactgaagacgtctgacttgat 1467
>dbj|AP006663.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT48G05, TM0358, complete sequence Length = 111995 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 356 cacagaagtccgatgtgcacgcacttcag 384 ||||||||||| |||||||||||| |||| Sbjct: 11368 cacagaagtccaatgtgcacgcacctcag 11396
>gb|M80238.1|ATHDNA Arabidopsis thaliana receptor kinase (Ark1) gene, exons 1-7 Length = 4312 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 510 tgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgact 569 |||||||||||||| | | ||||||| || |||||| || |||||||| || ||||||| Sbjct: 3605 tgtttctttttccacttataatctctagaagcaagaccccaaagctgaaaacatccgact 3546 Query: 570 t 570 | Sbjct: 3545 t 3545
>ref|NM_104817.2| Arabidopsis thaliana ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar bi> AT1G61360 mRNA, complete cds Length = 2647 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 agcatactcgggggacatgtatcc 615 |||||||||||| ||||||||||| Sbjct: 2058 agcatactcgggagacatgtatcc 2035
>ref|NM_118457.1| Arabidopsis thaliana kinase AT4G23280 mRNA, complete cds Length = 1971 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 589 catagcatactcgggggacatgtatccataggttcc 624 ||||||||||||||| | ||| || ||||||||||| Sbjct: 1527 catagcatactcgggagccatataaccataggttcc 1492
>gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182995 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tggatctgtgtgcatgcctg 227 |||||||||||||||||||| Sbjct: 19724 tggatctgtgtgcatgcctg 19705
>ref|XM_467441.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2211 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 1726 cgccgaagccgaacacgtccgact 1703
>ref|XM_467440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2475 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 1769 cgccgaagccgaacacgtccgact 1746
>ref|NM_191517.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2424 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 589 catagcatactcgggggacatgtatccataggttcc 624 |||||||||||| || | |||||||||||| ||||| Sbjct: 2001 catagcatactccggagccatgtatccatatgttcc 1966
>ref|XM_478588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2356 Score = 40.1 bits (20), Expect = 8.6 Identities = 92/116 (79%) Strand = Plus / Minus Query: 509 ctgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgac 568 |||||||| |||| ||||| ||||||| |||| || || || |||||| |||||||| Sbjct: 1788 ctgtttctccttcccgtgacaatctctatgatcagaacaccaaaactgaacgcgtccgac 1729 Query: 569 ttgatagagtaattcccacgcatagcatactcgggggacatgtatccataggttcc 624 |||| || || | ||||||||| || || || || | |||||||||||| ||||| Sbjct: 1728 ttgactgaatactgcccacgcatggcgtattccggtgccatgtatccatatgttcc 1673
>gb|BT018756.1| Zea mays clone EL01N0523E10.d mRNA sequence Length = 1432 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 acgccgaagctgaacacgtc 564 |||||||||||||||||||| Sbjct: 714 acgccgaagctgaacacgtc 695
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057F07 map near 50283S, complete sequence Length = 139827 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 548 ccgaagctgaacacgtccgacttg 571 ||||||||||||||||| |||||| Sbjct: 85462 ccgaagctgaacacgtcggacttg 85485
>gb|AC158164.3| Mus musculus BAC clone RP23-457E24 from chromosome 13, complete sequence Length = 137550 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tggatctgtgtgcatgcctg 227 |||||||||||||||||||| Sbjct: 43946 tggatctgtgtgcatgcctg 43927
>ref|XM_416910.1| PREDICTED: Gallus gallus similar to C2orf29 protein (LOC418711), mRNA Length = 1735 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccgcggggtcttcttgaaca 355 |||||||||||||||||||| Sbjct: 663 ccgcggggtcttcttgaaca 644
>gb|AY663848.1| Oryza sativa (japonica cultivar-group) lectin receptor kinase 1 (lrk1) mRNA, complete cds Length = 2701 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 1833 cgccgaagccgaacacgtccgact 1810
>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence Length = 201286 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tggatctgtgtgcatgcctg 227 |||||||||||||||||||| Sbjct: 172085 tggatctgtgtgcatgcctg 172104
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tgcatcaatataggttattt 83 |||||||||||||||||||| Sbjct: 588059 tgcatcaatataggttattt 588078
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tggatgcaaaatgctggcct 267 |||||||||||||||||||| Sbjct: 4320246 tggatgcaaaatgctggcct 4320265
>gb|AC102675.9| Mus musculus, clone RP23-232O16, complete sequence Length = 208734 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tggatctgtgtgcatgcctg 227 |||||||||||||||||||| Sbjct: 155786 tggatctgtgtgcatgcctg 155767
>gb|AC152056.17| Glycine max clone gmp1-98f7, complete sequence Length = 122930 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 589 catagcatactcgggggacatgtatcca 616 |||||||||||| || |||||||||||| Sbjct: 83159 catagcatactctggagacatgtatcca 83132
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatcca 616 ||||||||||| |||||||||||| Sbjct: 26850 gcatactcgggagacatgtatcca 26827
>emb|AL022347.1|ATF21P8 Arabidopsis thaliana DNA chromosome 4, BAC clone F21P8 (ESSA project) Length = 85785 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatcca 616 ||||||||||| |||||||||||| Sbjct: 61204 gcatactcgggagacatgtatcca 61181
>gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence Length = 113397 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 589 catagcatactcgggggacatgtatcca 616 |||||||||||| || |||||||||||| Sbjct: 53513 catagcatactctggagacatgtatcca 53486
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 catctggtctccaggagaat 404 |||||||||||||||||||| Sbjct: 133487 catctggtctccaggagaat 133506
>gb|AC154371.2| Mus musculus BAC clone RP23-102A13 from chromosome 14, complete sequence Length = 206234 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atggatctgtgtgcatgcct 226 |||||||||||||||||||| Sbjct: 74918 atggatctgtgtgcatgcct 74899
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 ccgaagctgaacacgtccgacttg 571 ||||||||||||||||| |||||| Sbjct: 14160832 ccgaagctgaacacgtcggacttg 14160809
>gb|AC004255.1|AC004255 Arabidopsis thaliana BAC T1F9 chromosome 1, complete sequence Length = 97789 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 agcatactcgggggacatgtatcc 615 |||||||||||| ||||||||||| Sbjct: 54052 agcatactcgggagacatgtatcc 54029
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 catctggtctccaggagaat 404 |||||||||||||||||||| Sbjct: 25868 catctggtctccaggagaat 25849
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 133924 cgccgaagccgaacacgtccgact 133947 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 129956 cgccgaagccgaacacgtccgact 129979
>dbj|AK107391.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C12, full insert sequence Length = 2475 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 546 cgccgaagctgaacacgtccgact 569 ||||||||| |||||||||||||| Sbjct: 1769 cgccgaagccgaacacgtccgact 1746
>dbj|AK100722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116H24, full insert sequence Length = 2354 Score = 40.1 bits (20), Expect = 8.6 Identities = 92/116 (79%) Strand = Plus / Minus Query: 509 ctgtttctttttccagtgacgatctctaaaatcaagacgccgaagctgaacacgtccgac 568 |||||||| |||| ||||| ||||||| |||| || || || |||||| |||||||| Sbjct: 1786 ctgtttctccttcccgtgacaatctctatgatcagaacaccaaaactgaacgcgtccgac 1727 Query: 569 ttgatagagtaattcccacgcatagcatactcgggggacatgtatccataggttcc 624 |||| || || | ||||||||| || || || || | |||||||||||| ||||| Sbjct: 1726 ttgactgaatactgcccacgcatggcgtattccggtgccatgtatccatatgttcc 1671
>dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C19, full insert sequence Length = 2846 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 ccgaagctgaacacgtccgacttg 571 ||||||||||||||||| |||||| Sbjct: 1160 ccgaagctgaacacgtcggacttg 1137
>emb|AL929033.7| Mouse DNA sequence from clone RP23-427N17 on chromosome 2, complete sequence Length = 164571 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 tcttcttgaacacacagaag 363 |||||||||||||||||||| Sbjct: 53819 tcttcttgaacacacagaag 53800
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 catctggtctccaggagaat 404 |||||||||||||||||||| Sbjct: 133305 catctggtctccaggagaat 133324
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 ccgaagctgaacacgtccgacttg 571 ||||||||||||||||| |||||| Sbjct: 14242834 ccgaagctgaacacgtcggacttg 14242811
>gb|U20948.1|ITU20948 Ipomoea trifida receptor protein kinase (IRK1) mRNA, complete cds Length = 3249 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 593 gcatactcgggggacatgtatccataggttcc 624 ||||| ||||||||||| |||||||| ||||| Sbjct: 2568 gcatattcgggggacatatatccatatgttcc 2537
>gb|AC170913.2| Mus musculus BAC clone RP23-197F6 from chromosome 13, complete sequence Length = 199317 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tggatctgtgtgcatgcctg 227 |||||||||||||||||||| Sbjct: 65694 tggatctgtgtgcatgcctg 65713
>gb|AC095023.2| Sus scrofa clone RP44-405I2, complete sequence Length = 51739 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 atgctggcctagatggagct 277 |||||||||||||||||||| Sbjct: 12679 atgctggcctagatggagct 12698
>emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on chromosome 11, complete sequence Length = 162556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cacagtgctgctgcttagca 305 |||||||||||||||||||| Sbjct: 133964 cacagtgctgctgcttagca 133983 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,425,338 Number of Sequences: 3902068 Number of extensions: 5425338 Number of successful extensions: 84152 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 83561 Number of HSP's gapped (non-prelim): 593 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
