>MYCS_MOUSE (Q9Z304) Protein S-myc|
          Length = 431

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 349 TTPRKGCSNTSIQSELLAPLSFSQKEKMGLCKHN---PGE*MWKAFEM 483
           T P   C N+ ++ +LL P  + +++ +    HN   PGE +WK FE+
Sbjct: 8   TMPGMICKNSDLEFDLLKPCFYPEEDDIYFGGHNSTPPGEDIWKKFEL 55

>GLI3_MOUSE (Q61602) Zinc finger protein GLI3|
          Length = 1596

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 212  SFPAQRLPYPRKNQSQRSPYHGHPEEGHRSADSSHDCPCKR 334
            S  + RL  PR +     P HGH + G+R  +   D PC+R
Sbjct: 1534 SHSSSRLTTPRASLPFPIPIHGHHQHGYRGYEFFADLPCRR 1574

>YCF55_PORPU (P51203) Hypothetical 37.8 kDa protein ycf55 (ORF320)|
          Length = 320

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -3

Query: 664 LSTRELQKQRNEVAINGWLHQYFESVISMYEDRFELYV 551
           LS R+L+K +N +  N  +  Y E   ++YE R++++V
Sbjct: 197 LSDRKLEKLKNNLVWNTLIQNYIERPRAIYESRYKVWV 234

>KLH21_HUMAN (Q9UJP4) Kelch-like protein 21|
          Length = 539

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 331 KALQYQTTPRKGCSNTSIQSELLAPLSFSQKEKMGLCKHNPGE*MW 468
           +ALQ  T P   CS T+ +  L A  S + KE M +  ++P   +W
Sbjct: 403 EALQPMTYPMDNCSTTACRGRLYAIGSLAGKETMVMQCYDPDTDLW 448

>YC55L_SYNY3 (P74126) Ycf55-like protein|
          Length = 562

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 20/87 (22%), Positives = 33/87 (37%)
 Frame = -3

Query: 481 FRKPSTSTHLDYVCISPFSLSVRRTKELRALTGWRYYYSLFLELSDIAMPXXXXXXXXXX 302
           F    T  +L    I    +   R +EL  L    ++ ++ LE  D   P          
Sbjct: 462 FESQHTLLYLTPAGIVTTQVYAPRQQELTQLRAVPWFVTIVLECRDALSPRVRSVIEFVG 521

Query: 301 XXXXXXXXSMIGRSLGLIFSGIRQSLG 221
                    ++GR++GL+  GI Q +G
Sbjct: 522 NGLVFLLTQVVGRAIGLVGKGIIQGIG 548

>MYC2_SPEBE (Q64210) N-myc 2 proto-oncogene protein|
          Length = 454

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +1

Query: 349 TTPRKGCSNTSIQSELLAPLSFSQKEKMGLCKHN---PGE*MWKAFEM 483
           T PR  C N  ++ + L P  +  ++       N   PGE +WK FE+
Sbjct: 8   TMPRMICRNADLEFDWLQPCFYPDEDDFYFSGPNSTPPGEDIWKKFEL 55

>MYC2_MARMO (P20389) N-myc 2 proto-oncogene protein|
          Length = 454

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +1

Query: 349 TTPRKGCSNTSIQSELLAPLSFSQKEKMGLCKHN---PGE*MWKAFEM 483
           T PR  C N  ++ + L P  +  ++       N   PGE +WK FE+
Sbjct: 8   TMPRMICRNADLEFDWLQPCFYPDEDDFYFSGPNSTPPGEDIWKKFEL 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,991,445
Number of Sequences: 219361
Number of extensions: 1721623
Number of successful extensions: 4362
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4358
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)