ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11f16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465976.1| Oryza sativa (japonica cultivar-group), mRNA 149 1e-32
2dbj|AK066257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3dbj|AK065046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7gb|AY107431.1| Zea mays PCO114292 mRNA sequence 86 2e-13
8emb|Z99288.1|CEZK262 Caenorhabditis elegans Cosmid ZK262, comple... 46 0.15
9emb|CR936360.14| Human DNA sequence from clone RP13-440N7 on chr... 44 0.59
10gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, comp... 42 2.3
11gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequ... 42 2.3
12emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chro... 42 2.3
13gb|AC113132.3| Homo sapiens chromosome 18, clone RP11-433F3, com... 42 2.3
14gb|AC090393.9| Homo sapiens chromosome 18, clone RP11-738B2, com... 42 2.3
15gb|AC107423.7| Homo sapiens 3 BAC RP11-372M20 (Roswell Park Canc... 42 2.3
16dbj|AK142022.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 42 2.3
17gb|AC117421.6| Homo sapiens 3 BAC RP11-147F23 (Roswell Park Canc... 42 2.3
18gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, comple... 42 2.3
19gb|L07508.1|MUSGOLLIB Mouse Golli-mpb mRNA, complete cds (altern... 42 2.3
20gb|L07506.1|MUSGOLLI4 Mouse Golli-mpb gene, exon 5C and 3' flank 42 2.3
21gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 9.1
22gb|AC139884.8| Mus musculus chromosome 6, clone RP23-343E20, com... 40 9.1
23gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, co... 40 9.1
24gb|AC004028.2| Homo sapiens PAC clone RP4-800B9 from 7, complete... 40 9.1
25gb|AY390763.1| Mus musculus strain 129/SvJ mu opioid receptor MO... 40 9.1
26gb|AF167567.1| Mus musculus mu opioid receptor variant BII mRNA,... 40 9.1
27gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete se... 40 9.1
28emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on ch... 40 9.1
29emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.1
30gb|AC164171.5| Mus musculus 10 BAC RP24-574G7 (Roswell Park Canc... 40 9.1
31gb|AC011029.7| Homo sapiens chromosome 8, clone RP11-202L1, comp... 40 9.1
32gb|AC093015.5| Homo sapiens 12q BAC RP11-534K23 (Roswell Park Ca... 40 9.1
33gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell ... 40 9.1
34gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell ... 40 9.1
35ref|XM_687303.1| PREDICTED: Danio rerio similar to erythrocyte m... 40 9.1
36gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, compl... 40 9.1
37gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 9.1
38gb|AC025782.7|AC025782 Arabidopsis thaliana chromosome 1 BAC T15... 40 9.1
39gb|AC073643.3| Homo sapiens BAC clone RP11-448J8 from 2, complet... 40 9.1
40gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, ... 40 9.1
41dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 40 9.1
42gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Can... 40 9.1
43emb|BX649464.6| Mouse DNA sequence from clone RP23-51N4 on chrom... 40 9.1
44gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 ... 40 9.1
45gb|AE015927.1| Clostridium tetani E88, complete genome 40 9.1
46emb|AL732467.8| Mouse DNA sequence from clone RP23-147L14 on chr... 40 9.1
47gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 9.1
48emb|CT030654.8| Mouse DNA sequence from clone RP23-332G16 on chr... 40 9.1 
>ref|XM_465976.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2023

 Score =  149 bits (75), Expect = 1e-32
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                        
Query: 541  ttctgcatagaacatataactcaaacctgtcctcgtacattgaaataactgactcgaaat 600
            ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 1441 ttctggataaaacatataactcaaacctgtcctcgtacattgagacaactgactcaaaat 1382

                                                                   
Query: 601  actggtgcagccacccattaattgccacctcattacgctgcttttgaagttctct 655
            ||||||||||||||||||||||||||||||| ||||||    |||||||||||||
Sbjct: 1381 actggtgcagccacccattaattgccacctcgttacgcattctttgaagttctct 1327



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 228  gattgccttatcccagaaaaaatcagtcccagagatctccctatcatggacacccagaag 287
            |||||||||||||| || ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 1754 gattgccttatccctgagaaaatcaatcccagagaccttcctatcatggacacccagaag 1695

                                                                        
Query: 288  aaggacaccgcagcgctgactctagccacgactgcccgtgcaaaaggcattgcaatatca 347
             | ||||| ||||| || ||| | |  || || |||| |   |||||||| |||||||| 
Sbjct: 1694 tacgacactgcagcactaactttggtgacaacagcccttatgaaaggcatggcaatatct 1635

                                                                        
Query: 348  gacaactccaagaaaaggctgtagtaatacctccatccagtcagagctcttagctccttt 407
            ||||  || || || |||||| | |||||||||||||||| ||||||||| |  || || 
Sbjct: 1634 gacatttctaataataggctgaaataatacctccatccagccagagctctcaattctttc 1575

                                             
Query: 408  gtccttctcacagaaagagaaaatgggcttatg 440
            ||||||||||| | ||||||||||| |||||||
Sbjct: 1574 gtccttctcaccggaagagaaaatgagcttatg 1542
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>dbj|AK066257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059E11, full
            insert sequence
          Length = 2024

 Score =  149 bits (75), Expect = 1e-32
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                        
Query: 541  ttctgcatagaacatataactcaaacctgtcctcgtacattgaaataactgactcgaaat 600
            ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 1442 ttctggataaaacatataactcaaacctgtcctcgtacattgagacaactgactcaaaat 1383

                                                                   
Query: 601  actggtgcagccacccattaattgccacctcattacgctgcttttgaagttctct 655
            ||||||||||||||||||||||||||||||| ||||||    |||||||||||||
Sbjct: 1382 actggtgcagccacccattaattgccacctcgttacgcattctttgaagttctct 1328



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 228  gattgccttatcccagaaaaaatcagtcccagagatctccctatcatggacacccagaag 287
            |||||||||||||| || ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 1755 gattgccttatccctgagaaaatcaatcccagagaccttcctatcatggacacccagaag 1696

                                                                        
Query: 288  aaggacaccgcagcgctgactctagccacgactgcccgtgcaaaaggcattgcaatatca 347
             | ||||| ||||| || ||| | |  || || |||| |   |||||||| |||||||| 
Sbjct: 1695 tacgacactgcagcactaactttggtgacaacagcccttatgaaaggcatggcaatatct 1636

                                                                        
Query: 348  gacaactccaagaaaaggctgtagtaatacctccatccagtcagagctcttagctccttt 407
            ||||  || || || |||||| | |||||||||||||||| ||||||||| |  || || 
Sbjct: 1635 gacatttctaataataggctgaaataatacctccatccagccagagctctcaattctttc 1576

                                             
Query: 408  gtccttctcacagaaagagaaaatgggcttatg 440
            ||||||||||| | ||||||||||| |||||||
Sbjct: 1575 gtccttctcaccggaagagaaaatgagcttatg 1543
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>dbj|AK065046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I05, full
            insert sequence
          Length = 2166

 Score =  149 bits (75), Expect = 1e-32
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                        
Query: 541  ttctgcatagaacatataactcaaacctgtcctcgtacattgaaataactgactcgaaat 600
            ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 1567 ttctggataaaacatataactcaaacctgtcctcgtacattgagacaactgactcaaaat 1508

                                                                   
Query: 601  actggtgcagccacccattaattgccacctcattacgctgcttttgaagttctct 655
            ||||||||||||||||||||||||||||||| ||||||    |||||||||||||
Sbjct: 1507 actggtgcagccacccattaattgccacctcgttacgcattctttgaagttctct 1453



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 228  gattgccttatcccagaaaaaatcagtcccagagatctccctatcatggacacccagaag 287
            |||||||||||||| || ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 1880 gattgccttatccctgagaaaatcaatcccagagaccttcctatcatggacacccagaag 1821

                                                                        
Query: 288  aaggacaccgcagcgctgactctagccacgactgcccgtgcaaaaggcattgcaatatca 347
             | ||||| ||||| || ||| | |  || || |||| |   |||||||| |||||||| 
Sbjct: 1820 tacgacactgcagcactaactttggtgacaacagcccttatgaaaggcatggcaatatct 1761

                                                                        
Query: 348  gacaactccaagaaaaggctgtagtaatacctccatccagtcagagctcttagctccttt 407
            ||||  || || || |||||| | |||||||||||||||| ||||||||| |  || || 
Sbjct: 1760 gacatttctaataataggctgaaataatacctccatccagccagagctctcaattctttc 1701

                                             
Query: 408  gtccttctcacagaaagagaaaatgggcttatg 440
            ||||||||||| | ||||||||||| |||||||
Sbjct: 1700 gtccttctcaccggaagagaaaatgagcttatg 1668
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                            
Query: 541      ttctgcatagaacatataactcaaacctgtcctcgtacattgaaataactgactcgaaat 600
                ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 18667619 ttctggataaaacatataactcaaacctgtcctcgtacattgagacaactgactcaaaat 18667560

                                              
Query: 601      actggtgcagccacccattaattgccacct 630
                ||||||||||||||||||||||||||||||
Sbjct: 18667559 actggtgcagccacccattaattgccacct 18667530



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                            
Query: 228      gattgccttatcccagaaaaaatcagtcccagagatctccctatcatggacacccagaag 287
                |||||||||||||| || ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 18668038 gattgccttatccctgagaaaatcaatcccagagaccttcctatcatggacacccagaag 18667979

                              
Query: 288      aaggacaccgcagc 301
                 | ||||| |||||
Sbjct: 18667978 tacgacactgcagc 18667965



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 380      ccatccagtcagagctcttagctcctttgtccttctcacagaaagagaaaatgggcttat 439
                |||||||| ||||||||| |  || || ||||||||||| | ||||||||||| ||||||
Sbjct: 18667780 ccatccagccagagctctcaattctttcgtccttctcaccggaagagaaaatgagcttat 18667721

                 
Query: 440      g 440
                |
Sbjct: 18667720 g 18667720
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>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0071O21
          Length = 158410

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                         
Query: 541   ttctgcatagaacatataactcaaacctgtcctcgtacattgaaataactgactcgaaat 600
             ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 10261 ttctggataaaacatataactcaaacctgtcctcgtacattgagacaactgactcaaaat 10202

                                           
Query: 601   actggtgcagccacccattaattgccacct 630
             ||||||||||||||||||||||||||||||
Sbjct: 10201 actggtgcagccacccattaattgccacct 10172



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 228   gattgccttatcccagaaaaaatcagtcccagagatctccctatcatggacacccagaag 287
             |||||||||||||| || ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 10680 gattgccttatccctgagaaaatcaatcccagagaccttcctatcatggacacccagaag 10621

                           
Query: 288   aaggacaccgcagc 301
              | ||||| |||||
Sbjct: 10620 tacgacactgcagc 10607



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 380   ccatccagtcagagctcttagctcctttgtccttctcacagaaagagaaaatgggcttat 439
             |||||||| ||||||||| |  || || ||||||||||| | ||||||||||| ||||||
Sbjct: 10422 ccatccagccagagctctcaattctttcgtccttctcaccggaagagaaaatgagcttat 10363

              
Query: 440   g 440
             |
Sbjct: 10362 g 10362
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>dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1471_E11
          Length = 103912

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                         
Query: 541   ttctgcatagaacatataactcaaacctgtcctcgtacattgaaataactgactcgaaat 600
             ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 93975 ttctggataaaacatataactcaaacctgtcctcgtacattgagacaactgactcaaaat 93916

                                           
Query: 601   actggtgcagccacccattaattgccacct 630
             ||||||||||||||||||||||||||||||
Sbjct: 93915 actggtgcagccacccattaattgccacct 93886



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 228   gattgccttatcccagaaaaaatcagtcccagagatctccctatcatggacacccagaag 287
             |||||||||||||| || ||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 94394 gattgccttatccctgagaaaatcaatcccagagaccttcctatcatggacacccagaag 94335

                           
Query: 288   aaggacaccgcagc 301
              | ||||| |||||
Sbjct: 94334 tacgacactgcagc 94321



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 380   ccatccagtcagagctcttagctcctttgtccttctcacagaaagagaaaatgggcttat 439
             |||||||| ||||||||| |  || || ||||||||||| | ||||||||||| ||||||
Sbjct: 94136 ccatccagccagagctctcaattctttcgtccttctcaccggaagagaaaatgagcttat 94077

              
Query: 440   g 440
             |
Sbjct: 94076 g 94076
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>gb|AY107431.1| Zea mays PCO114292 mRNA sequence
          Length = 531

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 333 ggcattgcaatatcagacaactccaagaaaaggctgtagtaatacctccatccagtcaga 392
           ||||| |||||||| |||||||| ||||| | |||| ||||||||||||||||| ||| |
Sbjct: 349 ggcatggcaatatctgacaactctaagaataagctgaagtaatacctccatccaatcaaa 408

                                  
Query: 393 gctcttagctcctttgtccttct 415
           |||||||  ||||||||||||||
Sbjct: 409 gctcttaattcctttgtccttct 431



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                       
Query: 214 atttccagcccagcgattgccttatcccagaaaaaatcagtcccagagatctccctatca 273
           |||||||||| || ||||| || ||||| || |||||||| || ||||| || || ||||
Sbjct: 230 atttccagcctagtgattgtctaatccctgagaaaatcagcccaagagaccttccaatca 289

                                      
Query: 274 tggacacccagaagaaggacaccgcag 300
           | |||||||||||| ||||||||||||
Sbjct: 290 ttgacacccagaagtaggacaccgcag 316
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>emb|Z99288.1|CEZK262 Caenorhabditis elegans Cosmid ZK262, complete sequence
          Length = 39555

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 401   ctcctttgtccttctcacagaaa 423
             |||||||||||||||||||||||
Sbjct: 35556 ctcctttgtccttctcacagaaa 35534
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>emb|CR936360.14| Human DNA sequence from clone RP13-440N7 on chromosome X, complete
             sequence
          Length = 154563

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 182   tctcaaaaagaaagctaaagaa 203
             ||||||||||||||||||||||
Sbjct: 84829 tctcaaaaagaaagctaaagaa 84808
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>gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, complete sequence
          Length = 216914

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   aaagctaaagaaacacttctt 212
             |||||||||||||||||||||
Sbjct: 20293 aaagctaaagaaacacttctt 20273
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>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence
          Length = 95814

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 541   ttctgcatagaacatataactcaaa 565
             ||||||||||||||||||| |||||
Sbjct: 35399 ttctgcatagaacatataaatcaaa 35423
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>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains  a
             SEC61 gamma subunit (Sec61g) pseudogene, a limb expression
             1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene,
             the 5' end of the gene for an ortholog of human Ras
             association (RalGDS/AF-6) and pleckstrin homology domains
             1 RAPH1 and a CpG island, complete sequence
          Length = 198631

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   aaagctaaagaaacacttctt 212
             |||||||||||||||||||||
Sbjct: 54028 aaagctaaagaaacacttctt 54048
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>gb|AC113132.3| Homo sapiens chromosome 18, clone RP11-433F3, complete sequence
          Length = 170609

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 186    aaaaagaaagctaaagaaacacttc 210
              ||||||||||| |||||||||||||
Sbjct: 135191 aaaaagaaagcaaaagaaacacttc 135167
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>gb|AC090393.9| Homo sapiens chromosome 18, clone RP11-738B2, complete sequence
          Length = 184486

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 186    aaaaagaaagctaaagaaacacttc 210
              ||||||||||| |||||||||||||
Sbjct: 152516 aaaaagaaagcaaaagaaacacttc 152540
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>gb|AC107423.7| Homo sapiens 3 BAC RP11-372M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 32788

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 20    tctcttttggaaaataagtagcaat 44
             |||||||||||||||||||| ||||
Sbjct: 25703 tctcttttggaaaataagtaacaat 25679
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>dbj|AK142022.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230005H13 product:unclassifiable, full
            insert sequence
          Length = 1778

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 192  aaagctaaagaaacacttctt 212
            |||||||||||||||||||||
Sbjct: 1277 aaagctaaagaaacacttctt 1257
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>gb|AC117421.6| Homo sapiens 3 BAC RP11-147F23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 113840

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 20   tctcttttggaaaataagtagcaat 44
            |||||||||||||||||||| ||||
Sbjct: 7086 tctcttttggaaaataagtaacaat 7110
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>gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, complete sequence
          Length = 198268

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 192  aaagctaaagaaacacttctt 212
            |||||||||||||||||||||
Sbjct: 5970 aaagctaaagaaacacttctt 5950
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>gb|L07508.1|MUSGOLLIB Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone
            BG21)
          Length = 1407

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 400  gctcctttgtccttctcacag 420
            |||||||||||||||||||||
Sbjct: 1047 gctcctttgtccttctcacag 1067
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>gb|L07506.1|MUSGOLLI4 Mouse Golli-mpb gene, exon 5C and 3' flank
          Length = 1154

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 400 gctcctttgtccttctcacag 420
           |||||||||||||||||||||
Sbjct: 203 gctcctttgtccttctcacag 223
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     acaactccaagaaaaggctg 368
               ||||||||||||||||||||
Sbjct: 2641867 acaactccaagaaaaggctg 2641886
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>gb|AC139884.8| Mus musculus chromosome 6, clone RP23-343E20, complete sequence
          Length = 227769

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 638    ctgcttttgaagttctcttg 657
              ||||||||||||||||||||
Sbjct: 142805 ctgcttttgaagttctcttg 142824
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>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence
          Length = 235544

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 636   cgctgcttttgaagttctct 655
             ||||||||||||||||||||
Sbjct: 97956 cgctgcttttgaagttctct 97975
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>gb|AC004028.2| Homo sapiens PAC clone RP4-800B9 from 7, complete sequence
          Length = 112392

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   tctcaaaaagaaagctaaagaaac 205
             |||||||||| |||||||||||||
Sbjct: 67993 tctcaaaaagtaagctaaagaaac 68016
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>gb|AY390763.1| Mus musculus strain 129/SvJ mu opioid receptor MOR-1 variants (Oprm)
            gene, exons 5a through 5e and partial cds; alternatively
            spliced
          Length = 3372

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   gaaaataagtagcaatgtct 48
            ||||||||||||||||||||
Sbjct: 2901 gaaaataagtagcaatgtct 2920
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>gb|AF167567.1| Mus musculus mu opioid receptor variant BII mRNA, complete cds
          Length = 2045

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   gaaaataagtagcaatgtct 48
            ||||||||||||||||||||
Sbjct: 1572 gaaaataagtagcaatgtct 1591
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>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence
          Length = 124526

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    atgatcttctgcatagaaca 554
              ||||||||||||||||||||
Sbjct: 121847 atgatcttctgcatagaaca 121828
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>emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on chromosome 10 Contains the
             5' end of the gene for a protein related to the N terminus
             of tre (RNTRE) (KIAA0019) and a CpG island, complete
             sequence
          Length = 142863

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   aaaagaaagctaaagaaaca 206
             ||||||||||||||||||||
Sbjct: 73471 aaaagaaagctaaagaaaca 73452
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>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24
          Length = 105306

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   atcagacaactccaagaaaa 363
             ||||||||||||||||||||
Sbjct: 71148 atcagacaactccaagaaaa 71129
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>gb|AC164171.5| Mus musculus 10 BAC RP24-574G7 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 147660

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   gaaaataagtagcaatgtct 48
            ||||||||||||||||||||
Sbjct: 2411 gaaaataagtagcaatgtct 2430
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>gb|AC011029.7| Homo sapiens chromosome 8, clone RP11-202L1, complete sequence
          Length = 161123

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   ctgtgttcttgcatgatctt 542
             ||||||||||||||||||||
Sbjct: 66353 ctgtgttcttgcatgatctt 66372
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>gb|AC093015.5| Homo sapiens 12q BAC RP11-534K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 115294

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    tgtatttatctcttttggaaaata 35
             |||||||||||||||||| |||||
Sbjct: 43632 tgtatttatctcttttggtaaata 43609
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>gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 172105

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tatctcttttggaaaataag 37
             ||||||||||||||||||||
Sbjct: 43920 tatctcttttggaaaataag 43901
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>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 153733

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tatctcttttggaaaataag 37
             ||||||||||||||||||||
Sbjct: 86414 tatctcttttggaaaataag 86395
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>ref|XM_687303.1| PREDICTED: Danio rerio similar to erythrocyte membrane-associated
           giant protein antigen 332 (LOC563943), mRNA
          Length = 1910

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 ctgctgtgttcttgcatgat 539
           ||||||||||||||||||||
Sbjct: 841 ctgctgtgttcttgcatgat 822
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>gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   ctcacagaaagagaaaatgg 433
             ||||||||||||||||||||
Sbjct: 62327 ctcacagaaagagaaaatgg 62346
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     atattctcaaaaagaaagct 197
               ||||||||||||||||||||
Sbjct: 1732303 atattctcaaaaagaaagct 1732322
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>gb|AC025782.7|AC025782 Arabidopsis thaliana chromosome 1 BAC T15P17 genomic sequence, complete
             sequence
          Length = 97899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   gtgcaaaaggcattgcaata 344
             ||||||||||||||||||||
Sbjct: 80251 gtgcaaaaggcattgcaata 80232
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>gb|AC073643.3| Homo sapiens BAC clone RP11-448J8 from 2, complete sequence
          Length = 44171

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   ttctcacagaaagagaaaat 431
             ||||||||||||||||||||
Sbjct: 36660 ttctcacagaaagagaaaat 36641
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>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence
          Length = 93590

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tatctcttttggaaaataag 37
             ||||||||||||||||||||
Sbjct: 21387 tatctcttttggaaaataag 21406
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>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     aaacacttcttcatttccag 221
               ||||||||||||||||||||
Sbjct: 2266500 aaacacttcttcatttccag 2266519
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>gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177129

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     gaaaataagtagcaatgtct 48
              ||||||||||||||||||||
Sbjct: 137673 gaaaataagtagcaatgtct 137692
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>emb|BX649464.6| Mouse DNA sequence from clone RP23-51N4 on chromosome 2, complete
             sequence
          Length = 33259

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 181   ttctcaaaaagaaagctaaagaaa 204
             |||||||||| |||||||||||||
Sbjct: 28596 ttctcaaaaataaagctaaagaaa 28573
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>gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 of 74 of the complete
              sequence
          Length = 291799

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tatctcttttggaaaataag 37
              ||||||||||||||||||||
Sbjct: 264947 tatctcttttggaaaataag 264966
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     tagagatattctcaaaaaga 192
               ||||||||||||||||||||
Sbjct: 2347407 tagagatattctcaaaaaga 2347388
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>emb|AL732467.8| Mouse DNA sequence from clone RP23-147L14 on chromosome 2, complete
              sequence
          Length = 229048

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     tggaaaataagtagcaatgt 46
              ||||||||||||||||||||
Sbjct: 214796 tggaaaataagtagcaatgt 214777
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 178     atattctcaaaaagaaagct 197
               ||||||||||||||||||||
Sbjct: 2497878 atattctcaaaaagaaagct 2497859
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>emb|CT030654.8| Mouse DNA sequence from clone RP23-332G16 on chromosome 17, complete
              sequence
          Length = 194694

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    cagaaagagaaaatgggctt 437
              ||||||||||||||||||||
Sbjct: 153059 cagaaagagaaaatgggctt 153078


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,810,349
Number of Sequences: 3902068
Number of extensions: 6810349
Number of successful extensions: 141692
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141406
Number of HSP's gapped (non-prelim): 286
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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