>ref|XM_467671.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2168

 Score =  188 bits (95), Expect = 6e-45
 Identities = 139/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 116  gggcgagcagggagaacttgacgtgcagcgagatcttgcccttgtcgacgtcgagcctgg 175
            |||| ||||| ||||||||||| ||||||  |||||| |||||||||||||| ||||| |
Sbjct: 1934 gggctagcagtgagaacttgacatgcagcatgatcttccccttgtcgacgtccagccttg 1875

                                                                        
Query: 176  cgccggtggcnagccagtatccggggctgtcgtgcggtcccatggtcacctgcgaggtgt 235
            |||||||| | |||||||| |||||||| || ||||||||||||||||||||||| ||||
Sbjct: 1874 cgccggtgacgagccagtaaccggggctatcctgcggtcccatggtcacctgcgacgtgt 1815

                                              
Query: 236  ccacgaacttgagcagcttctgcgcgcccacggg 269
            |||||||||||||||||||||||||||| |||||
Sbjct: 1814 ccacgaacttgagcagcttctgcgcgccgacggg 1781

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  188 bits (95), Expect = 6e-45
 Identities = 139/154 (90%)
 Strand = Plus / Plus

                                                                            
Query: 116      gggcgagcagggagaacttgacgtgcagcgagatcttgcccttgtcgacgtcgagcctgg 175
                |||| ||||| ||||||||||| ||||||  |||||| |||||||||||||| ||||| |
Sbjct: 30755417 gggctagcagtgagaacttgacatgcagcatgatcttccccttgtcgacgtccagccttg 30755476

                                                                            
Query: 176      cgccggtggcnagccagtatccggggctgtcgtgcggtcccatggtcacctgcgaggtgt 235
                |||||||| | |||||||| |||||||| || ||||||||||||||||||||||| ||||
Sbjct: 30755477 cgccggtgacgagccagtaaccggggctatcctgcggtcccatggtcacctgcgacgtgt 30755536

                                                  
Query: 236      ccacgaacttgagcagcttctgcgcgcccacggg 269
                |||||||||||||||||||||||||||| |||||
Sbjct: 30755537 ccacgaacttgagcagcttctgcgcgccgacggg 30755570

>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0487D09
          Length = 161531

 Score =  188 bits (95), Expect = 6e-45
 Identities = 139/154 (90%)
 Strand = Plus / Plus

                                                                         
Query: 116   gggcgagcagggagaacttgacgtgcagcgagatcttgcccttgtcgacgtcgagcctgg 175
             |||| ||||| ||||||||||| ||||||  |||||| |||||||||||||| ||||| |
Sbjct: 95564 gggctagcagtgagaacttgacatgcagcatgatcttccccttgtcgacgtccagccttg 95623

                                                                         
Query: 176   cgccggtggcnagccagtatccggggctgtcgtgcggtcccatggtcacctgcgaggtgt 235
             |||||||| | |||||||| |||||||| || ||||||||||||||||||||||| ||||
Sbjct: 95624 cgccggtgacgagccagtaaccggggctatcctgcggtcccatggtcacctgcgacgtgt 95683

                                               
Query: 236   ccacgaacttgagcagcttctgcgcgcccacggg 269
             |||||||||||||||||||||||||||| |||||
Sbjct: 95684 ccacgaacttgagcagcttctgcgcgccgacggg 95717

>dbj|AK099700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C24, full
            insert sequence
          Length = 2167

 Score =  188 bits (95), Expect = 6e-45
 Identities = 139/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 116  gggcgagcagggagaacttgacgtgcagcgagatcttgcccttgtcgacgtcgagcctgg 175
            |||| ||||| ||||||||||| ||||||  |||||| |||||||||||||| ||||| |
Sbjct: 1934 gggctagcagtgagaacttgacatgcagcatgatcttccccttgtcgacgtccagccttg 1875

                                                                        
Query: 176  cgccggtggcnagccagtatccggggctgtcgtgcggtcccatggtcacctgcgaggtgt 235
            |||||||| | |||||||| |||||||| || ||||||||||||||||||||||| ||||
Sbjct: 1874 cgccggtgacgagccagtaaccggggctatcctgcggtcccatggtcacctgcgacgtgt 1815

                                              
Query: 236  ccacgaacttgagcagcttctgcgcgcccacggg 269
            |||||||||||||||||||||||||||| |||||
Sbjct: 1814 ccacgaacttgagcagcttctgcgcgccgacggg 1781

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  157 bits (79), Expect = 2e-35
 Identities = 129/146 (88%)
 Strand = Plus / Minus

                                                                           
Query: 121     agcagggagaacttgacgtgcagcgagatcttgcccttgtcgacgtcgagcctggcgccg 180
               |||||||||||||||||||||||||||||| | |||||||||||||||||| | || |||
Sbjct: 7851746 agcagggagaacttgacgtgcagcgagatcctccccttgtcgacgtcgagctttgctccg 7851687

                                                                           
Query: 181     gtggcnagccagtatccggggctgtcgtgcggtcccatggtcacctgcgaggtgtccacg 240
               ||| | |||||||| ||||| | ||| ||||| ||||||||||||||||| || ||||||
Sbjct: 7851686 gtgaccagccagtagccgggacagtcctgcggccccatggtcacctgcgacgtctccacg 7851627

                                         
Query: 241     aacttgagcagcttctgcgcgcccac 266
               ||||||||||||  |||||| |||||
Sbjct: 7851626 aacttgagcagccgctgcgcccccac 7851601

>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0431E05
          Length = 146091

 Score =  157 bits (79), Expect = 2e-35
 Identities = 129/146 (88%)
 Strand = Plus / Minus

                                                                         
Query: 121   agcagggagaacttgacgtgcagcgagatcttgcccttgtcgacgtcgagcctggcgccg 180
             |||||||||||||||||||||||||||||| | |||||||||||||||||| | || |||
Sbjct: 66128 agcagggagaacttgacgtgcagcgagatcctccccttgtcgacgtcgagctttgctccg 66069

                                                                         
Query: 181   gtggcnagccagtatccggggctgtcgtgcggtcccatggtcacctgcgaggtgtccacg 240
             ||| | |||||||| ||||| | ||| ||||| ||||||||||||||||| || ||||||
Sbjct: 66068 gtgaccagccagtagccgggacagtcctgcggccccatggtcacctgcgacgtctccacg 66009

                                       
Query: 241   aacttgagcagcttctgcgcgcccac 266
             ||||||||||||  |||||| |||||
Sbjct: 66008 aacttgagcagccgctgcgcccccac 65983

>emb|BX004837.9| Zebrafish DNA sequence from clone CH211-134F7 in linkage group 19,
              complete sequence
          Length = 188325

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 81     actgtacagactctggaactgt 102
              ||||||||||||||||||||||
Sbjct: 126208 actgtacagactctggaactgt 126229

>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19,
             complete sequence
          Length = 175656

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 81    actgtacagactctggaactgt 102
             ||||||||||||||||||||||
Sbjct: 73474 actgtacagactctggaactgt 73453

>gb|AC078786.22| Homo sapiens 3 BAC RP11-474F17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87072

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     tccaaacaaatncaaaatccaaaa 32
             ||||||||||| ||||||||||||
Sbjct: 35662 tccaaacaaatccaaaatccaaaa 35685

>gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197893

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     tccaaacaaatncaaaatccaaaa 32
             ||||||||||| ||||||||||||
Sbjct: 64615 tccaaacaaatccaaaatccaaaa 64592

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 64       catttggcatcaggagaactg 84
                |||||||||||||||||||||
Sbjct: 35877031 catttggcatcaggagaactg 35877051

>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     catttggcatcaggagaactg 84
              |||||||||||||||||||||
Sbjct: 141489 catttggcatcaggagaactg 141509

>emb|CR407703.23| Zebrafish DNA sequence from clone CH211-141H12 in linkage group 9,
             complete sequence
          Length = 150766

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    gggtcagttagcatttggcat 73
             |||||||||||||||||||||
Sbjct: 18945 gggtcagttagcatttggcat 18965

>gb|AC149528.2| Xenopus tropicalis clone ISB-292P1, complete sequence
          Length = 87806

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    gagaactgtacagactctgg 96
             ||||||||||||||||||||
Sbjct: 16405 gagaactgtacagactctgg 16386

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    gcccttgtcgacgtcgagcc 172
              ||||||||||||||||||||
Sbjct: 567748 gcccttgtcgacgtcgagcc 567729

>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172540

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 15    caaatncaaaatccaaaaggagc 37
             ||||| |||||||||||||||||
Sbjct: 17818 caaatccaaaatccaaaaggagc 17840

>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the
            complete sequence
          Length = 271869

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 15   caaatncaaaatccaaaaggagc 37
            ||||| |||||||||||||||||
Sbjct: 3465 caaatccaaaatccaaaaggagc 3443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,710,133
Number of Sequences: 3902068
Number of extensions: 1710133
Number of successful extensions: 31021
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30941
Number of HSP's gapped (non-prelim): 80
length of query: 269
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 247
effective length of database: 17,147,199,772
effective search space: 4235358343684
effective search space used: 4235358343684
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)