ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal10p16 |
|---|---|
| Clone Library Name | barley_pub |
>SYI_PSEAE (Q9HVM4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 36.2 bits (82), Expect = 0.061 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +1 Query: 373 TEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 +E G++++ V ++ GRCW+++ D A P L G C+ SG+V Sbjct: 889 SEVAGLKLKVVKSTHAKCGRCWHHREDVGQHAAHPDLCGRCIENIEGSGEV 939
>SYI_PSESM (Q889E4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 33.9 bits (76), Expect = 0.30 Identities = 13/52 (25%), Positives = 28/52 (53%) Frame = +1 Query: 370 LTEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 +TE G++++ V ++ RCW+++ D + P + G C+ +G+V Sbjct: 888 VTEVAGLKLKVVKSGHAKCARCWHHREDVGVNPEHPEICGRCIDNISGAGEV 939
>SYI_PSEU2 (Q4ZYJ4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 33.1 bits (74), Expect = 0.52 Identities = 12/52 (23%), Positives = 29/52 (55%) Frame = +1 Query: 370 LTEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 +TE G++++ + + ++ RCW+++ D + P + G C+ +G+V Sbjct: 888 VTEVAGLKLKVLKSSHAKCARCWHHREDVGVNPEHPEICGRCVDNISGAGEV 939
>SYI_PSE14 (Q48NK6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 33.1 bits (74), Expect = 0.52 Identities = 12/52 (23%), Positives = 29/52 (55%) Frame = +1 Query: 370 LTEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 +TE G++++ + + ++ RCW+++ D + P + G C+ +G+V Sbjct: 888 VTEVAGLKLKVLKSSHAKCARCWHHREDVGVNPEHPEICGRCVDNISGAGEV 939
>SYI1_PSEFL (P18330) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA| ligase 1) (IleRS 1) (IleRS-R1) Length = 943 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = +1 Query: 373 TEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 TE G++++ V A + RCW+ + D + P + G C+ G+V Sbjct: 889 TEVPGLKLKVVKSAFPKCARCWHCREDVGVNPEHPEICGRCVDNISGEGEV 939
>SYI_PSEF5 (Q4K5U4) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 31.6 bits (70), Expect = 1.5 Identities = 14/51 (27%), Positives = 26/51 (50%) Frame = +1 Query: 373 TEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 TE G++++ V A + RCW+ + D + P + G C+ +G+V Sbjct: 889 TEVPGLKLKVVKSAFPKCARCWHCREDVGVHPEHPEICGRCVDNISGAGEV 939
>AFF2_HUMAN (P51816) AF4/FMR2 family member 2 (Fragile X mental retardation 2| protein) (Protein FMR-2) (FMR2P) (Ox19 protein) (Fragile X E mental retardation syndrome protein) Length = 1311 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = -3 Query: 530 RATSPELWSLYMQAPAR--YGSATPMSSSGLLYQQRPPWLAAPVTVRTSIPVCSVRPNAA 357 ++ SPE +QAP S+ SSGL Q PP L ++ P VRP Sbjct: 235 QSNSPEESEFAVQAPGSPLVASSLLAPSSGLSVQNFPPGLYCKTSMGQQKPTAYVRPMDG 294 Query: 356 SNSSPG*XXRARPAVQ 309 + +P +P+++ Sbjct: 295 QDQAPDISPTLKPSIE 310
>AFF2_PONPY (Q7YQM1) AF4/FMR2 family member 2 (Fragile X mental retardation| protein 2 homolog) (Protein FMR-2) Length = 1272 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = -3 Query: 530 RATSPELWSLYMQAPAR--YGSATPMSSSGLLYQQRPPWLAAPVTVRTSIPVCSVRPNAA 357 ++ SPE +QAP S+ SSGL Q PP L ++ P VRP Sbjct: 231 QSNSPEESEFAVQAPGSPLVASSLLAPSSGLSVQNFPPGLYCKTSMGQQKPTAYVRPMDG 290 Query: 356 SNSSPG*XXRARPAVQ 309 + +P +P+++ Sbjct: 291 QDQAPDISPTLKPSIE 306
>AFF2_PANTR (Q7YQM2) AF4/FMR2 family member 2 (Fragile X mental retardation| protein 2 homolog) (Protein FMR-2) Length = 1272 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = -3 Query: 530 RATSPELWSLYMQAPAR--YGSATPMSSSGLLYQQRPPWLAAPVTVRTSIPVCSVRPNAA 357 ++ SPE +QAP S+ SSGL Q PP L ++ P VRP Sbjct: 231 QSNSPEESEFAVQAPGSPLVASSLLAPSSGLSVQNFPPGLYCKTSMGQQKPTAYVRPMDG 290 Query: 356 SNSSPG*XXRARPAVQ 309 + +P +P+++ Sbjct: 291 QDQAPDISPTLKPSIE 306
>SYI_PSEPK (Q88Q92) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 943 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +1 Query: 373 TEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 TE G++++ V ++ GRCW+ + D P + G C+ SG+V Sbjct: 889 TEVEGLKLQVVKSGHTKCGRCWHFRADVGSHPEHPEICGRCVDNLTGSGEV 939
>SYI_ACIAD (Q6FG02) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 945 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = +1 Query: 373 TEHTGIEVRTVTGAASQGGRCWYNKPDELIGVADPYLAGACMYKDHNSGDV 525 TE G+ V+ + RCW+ PD P L G C+ SG+V Sbjct: 891 TEMDGLRVQISAAEGEKCVRCWHVLPDVNTHADHPGLCGRCIINVTGSGEV 941
>ATS15_HUMAN (Q8TE58) ADAMTS-15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 15) (ADAM-TS 15) (ADAM-TS15) Length = 950 Score = 30.0 bits (66), Expect = 4.4 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Frame = +1 Query: 340 PGLEFDAAFGLTEHTGIEVRTVTGAASQGGRCWYN-----KPDELIGVA 471 P +F A TEH G+ ++ +TG +S RC+Y+ +PD V+ Sbjct: 70 PDAQFLAPAFSTEHLGVPLQGLTGGSSDLRRCFYSGDVNAEPDSFAAVS 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,580,683 Number of Sequences: 219361 Number of extensions: 1147878 Number of successful extensions: 2800 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2797 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
