| Clone Name | rbaal10p14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | JI23_HORVU (P32024) 23 kDa jasmonate-induced protein | 212 | 5e-55 | 2 | MTMR9_HUMAN (Q96QG7) Myotubularin-related protein 9 | 30 | 4.6 | 3 | MTMR9_MOUSE (Q9Z2D0) Myotubularin-related protein 9 | 30 | 4.6 | 4 | AQP6_MOUSE (Q8C4A0) Aquaporin-6 (AQP-6) | 30 | 4.6 | 5 | AQP6_RAT (Q9WTY0) Aquaporin-6 (AQP-6) | 30 | 6.0 | 6 | PIPNB_PONPY (Q5R6F0) Phosphatidylinositol transfer protein beta ... | 30 | 6.0 |
|---|
>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein| Length = 210 Score = 212 bits (540), Expect = 5e-55 Identities = 100/117 (85%), Positives = 100/117 (85%) Frame = -2 Query: 557 PSDIQNGQWGAFLHVHPXXXXXXXXXAVVYRSKIPXXXXSCDWLFSWTVPYIGGNGVYTX 378 PSDIQNGQWGAFLHVHP AVVYRSKIP SCDWLFSWTVPYIGGNGVYT Sbjct: 94 PSDIQNGQWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSWTVPYIGGNGVYTE 153 Query: 377 IREEGHYPSVXSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNAPXVFEFPY 207 IREEGHYPSV SWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNA VFEFPY Sbjct: 154 IREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFEFPY 210
>MTMR9_HUMAN (Q96QG7) Myotubularin-related protein 9| Length = 549 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = +3 Query: 129 KLHKRTWTPHKYLKTTITTRCLQRDLVGKLENSRCVHGSAFTDVSLGNVSIVAI 290 KL W H +K +TT CL + + S +HG+ TD +L S+ I Sbjct: 298 KLEASNWLTH--IKEILTTACLAAQCIDREGASILIHGTEGTDSTLQVTSLAQI 349
>MTMR9_MOUSE (Q9Z2D0) Myotubularin-related protein 9| Length = 545 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = +3 Query: 129 KLHKRTWTPHKYLKTTITTRCLQRDLVGKLENSRCVHGSAFTDVSLGNVSIVAI 290 KL W H +K +TT CL + + S +HG+ TD +L S+ I Sbjct: 298 KLEASNWLTH--IKEILTTACLAAQCIDREGASVLIHGTEGTDSTLQVTSLAQI 349
>AQP6_MOUSE (Q8C4A0) Aquaporin-6 (AQP-6)| Length = 293 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 11/67 (16%) Frame = -3 Query: 535 NGVHSSTST----QVELPXVQLVPLCIVAR-------SPPAAAPAIGCSLGPSXTLVATG 389 N VH+STST VEL + LC+ A + PAA +LG + TG Sbjct: 130 NVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAMIGTSVALGHLIGIYFTG 189 Query: 388 CTLKSAR 368 C++ AR Sbjct: 190 CSMNPAR 196
>AQP6_RAT (Q9WTY0) Aquaporin-6 (AQP-6)| Length = 276 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 11/67 (16%) Frame = -3 Query: 535 NGVHSSTST----QVELPXVQLVPLCIVAR-------SPPAAAPAIGCSLGPSXTLVATG 389 N VH+STST VEL + LC+ A PAA +LG + TG Sbjct: 130 NVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAMIGTSVALGHLIGIYFTG 189 Query: 388 CTLKSAR 368 C++ AR Sbjct: 190 CSMNPAR 196
>PIPNB_PONPY (Q5R6F0) Phosphatidylinositol transfer protein beta isoform (PtdIns| transfer protein beta) (PtdInsTP) (PI-TP-beta) Length = 271 Score = 29.6 bits (65), Expect = 6.0 Identities = 9/29 (31%), Positives = 17/29 (58%) Frame = +3 Query: 135 HKRTWTPHKYLKTTITTRCLQRDLVGKLE 221 H++ W + Y +T +T C++ D K+E Sbjct: 83 HEKAWNAYPYCRTIVTNECMKDDFFIKIE 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,540,978 Number of Sequences: 219361 Number of extensions: 1550839 Number of successful extensions: 3729 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3728 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)