ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10p14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1JI23_HORVU (P32024) 23 kDa jasmonate-induced protein 212 5e-55
2MTMR9_HUMAN (Q96QG7) Myotubularin-related protein 9 30 4.6
3MTMR9_MOUSE (Q9Z2D0) Myotubularin-related protein 9 30 4.6
4AQP6_MOUSE (Q8C4A0) Aquaporin-6 (AQP-6) 30 4.6
5AQP6_RAT (Q9WTY0) Aquaporin-6 (AQP-6) 30 6.0
6PIPNB_PONPY (Q5R6F0) Phosphatidylinositol transfer protein beta ... 30 6.0

>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein|
          Length = 210

 Score =  212 bits (540), Expect = 5e-55
 Identities = 100/117 (85%), Positives = 100/117 (85%)
 Frame = -2

Query: 557 PSDIQNGQWGAFLHVHPXXXXXXXXXAVVYRSKIPXXXXSCDWLFSWTVPYIGGNGVYTX 378
           PSDIQNGQWGAFLHVHP         AVVYRSKIP    SCDWLFSWTVPYIGGNGVYT 
Sbjct: 94  PSDIQNGQWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSWTVPYIGGNGVYTE 153

Query: 377 IREEGHYPSVXSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNAPXVFEFPY 207
           IREEGHYPSV SWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNA  VFEFPY
Sbjct: 154 IREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFEFPY 210



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>MTMR9_HUMAN (Q96QG7) Myotubularin-related protein 9|
          Length = 549

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 129 KLHKRTWTPHKYLKTTITTRCLQRDLVGKLENSRCVHGSAFTDVSLGNVSIVAI 290
           KL    W  H  +K  +TT CL    + +   S  +HG+  TD +L   S+  I
Sbjct: 298 KLEASNWLTH--IKEILTTACLAAQCIDREGASILIHGTEGTDSTLQVTSLAQI 349



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>MTMR9_MOUSE (Q9Z2D0) Myotubularin-related protein 9|
          Length = 545

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 129 KLHKRTWTPHKYLKTTITTRCLQRDLVGKLENSRCVHGSAFTDVSLGNVSIVAI 290
           KL    W  H  +K  +TT CL    + +   S  +HG+  TD +L   S+  I
Sbjct: 298 KLEASNWLTH--IKEILTTACLAAQCIDREGASVLIHGTEGTDSTLQVTSLAQI 349



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>AQP6_MOUSE (Q8C4A0) Aquaporin-6 (AQP-6)|
          Length = 293

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 11/67 (16%)
 Frame = -3

Query: 535 NGVHSSTST----QVELPXVQLVPLCIVAR-------SPPAAAPAIGCSLGPSXTLVATG 389
           N VH+STST     VEL     + LC+ A        + PAA      +LG    +  TG
Sbjct: 130 NVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAMIGTSVALGHLIGIYFTG 189

Query: 388 CTLKSAR 368
           C++  AR
Sbjct: 190 CSMNPAR 196



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>AQP6_RAT (Q9WTY0) Aquaporin-6 (AQP-6)|
          Length = 276

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
 Frame = -3

Query: 535 NGVHSSTST----QVELPXVQLVPLCIVAR-------SPPAAAPAIGCSLGPSXTLVATG 389
           N VH+STST     VEL     + LC+ A          PAA      +LG    +  TG
Sbjct: 130 NVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGSPAAMIGTSVALGHLIGIYFTG 189

Query: 388 CTLKSAR 368
           C++  AR
Sbjct: 190 CSMNPAR 196



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>PIPNB_PONPY (Q5R6F0) Phosphatidylinositol transfer protein beta isoform (PtdIns|
           transfer protein beta) (PtdInsTP) (PI-TP-beta)
          Length = 271

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 135 HKRTWTPHKYLKTTITTRCLQRDLVGKLE 221
           H++ W  + Y +T +T  C++ D   K+E
Sbjct: 83  HEKAWNAYPYCRTIVTNECMKDDFFIKIE 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,540,978
Number of Sequences: 219361
Number of extensions: 1550839
Number of successful extensions: 3729
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3728
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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