ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11e18 |
|---|---|
| Clone Library Name | barley_pub |
>Y115_ADE02 (P03290) Hypothetical protein E-115| Length = 115 Score = 31.6 bits (70), Expect = 0.87 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 10/56 (17%) Frame = -3 Query: 406 PASTP--ACSRAARPCPWARRSCSSSWTPRR----*PWARTTAP----DTGSPPAP 269 P+STP C+ A R P R SC+ TPRR PW+ T P TGS AP Sbjct: 41 PSSTPLKVCT-APRAAPPPRASCAPRATPRRGWTMTPWSNATWPTRRAKTGSASAP 95
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Frame = -3 Query: 433 RSGGRRWWWPASTPACSRAARP--CP--WARRSCSSSWTPRR*PWARTTAPDTGSPPAPG 266 RSG P C R+AR CP W RRS + P R + P G P APG Sbjct: 506 RSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPG 565 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Frame = -3 Query: 433 RSGGRRWWWPASTPACSRAARP--CP--WARRSCSSSWTPRR*PWARTTAPDTGSPPAPG 266 RSG P C R+AR CP W RRS + P R + P G P APG Sbjct: 381 RSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPG 440 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%) Frame = -3 Query: 433 RSGGRRWWWPASTPACSRAARP--CP--WARRSCSSSWTPRR*PWARTTAPDTGSPPAPG 266 RSG P C R+AR CP W RRS + P R + P G P APG Sbjct: 256 RSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPG 315 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/48 (35%), Positives = 19/48 (39%) Frame = -3 Query: 409 WPASTPACSRAARPCPWARRSCSSSWTPRR*PWARTTAPDTGSPPAPG 266 W A P C R W RRS + P R + P G P APG Sbjct: 148 WSARNPGCPRT-----WRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPG 190
>G6B_RAT (Q6MG59) G6b protein precursor| Length = 232 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 418 RWWWPASTPAC---SRAARPCPWARRSCSSSWTP 326 RW W S PAC S+ RP WA SSS TP Sbjct: 43 RWAWAPSFPACKGLSKGRRPILWA----SSSGTP 72
>G6B_HUMAN (O95866) G6b protein precursor| Length = 241 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = -3 Query: 418 RWWWPASTPAC---SRAARPCPWARRSCSSSWTP 326 RW W S PAC S+ RP WA SSS TP Sbjct: 43 RWVWAPSFPACKGLSKGRRPILWA----SSSGTP 72
>AAEB_ERWCT (Q6DAH4) p-hydroxybenzoic acid efflux pump subunit aaeB (pHBA| efflux pump protein B) Length = 662 Score = 29.3 bits (64), Expect = 4.3 Identities = 31/82 (37%), Positives = 39/82 (47%), Gaps = 2/82 (2%) Frame = +3 Query: 87 TAAFTGSKQIQNPKGAGLNHRGQLAFGIRRTVQTLELSGRRRGEQGELDVQRDLALVDVE 266 T++ TGS PK A L +L+F I V +L L + E V A+V Sbjct: 3 TSSLTGSLFFTTPKFARLRFAFKLSFAI---VLSLFLGFHLQLETPRWSVLT-AAIVAAG 58 Query: 267 PG--AGGEPVSGAVVRAHGHLR 326 P AGGEP SGA +R G LR Sbjct: 59 PAFAAGGEPFSGA-IRHRGMLR 79
>EPN1_HUMAN (Q9Y6I3) Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding| mitotic phosphoprotein) Length = 551 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/49 (36%), Positives = 18/49 (36%) Frame = -3 Query: 415 WWWPASTPACSRAARPCPWARRSCSSSWTPRR*PWARTTAPDTGSPPAP 269 W PA TPA RP A S PW T AP G P P Sbjct: 283 WGGPAPTPASGDPWRPAAPAGPSVD--------PWGGTPAPAAGEGPTP 323
>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)| Length = 963 Score = 28.9 bits (63), Expect = 5.7 Identities = 19/59 (32%), Positives = 28/59 (47%) Frame = +3 Query: 123 PKGAGLNHRGQLAFGIRRTVQTLELSGRRRGEQGELDVQRDLALVDVEPGAGGEPVSGA 299 P G+G R + +RR+V L L GRRR +Q +R + + PGA + A Sbjct: 309 PAGSGGKERSE-NLSLRRSVSELSLQGRRRRQQ-----ERRQQALSMAPGAADAQIGTA 361
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 28.1 bits (61), Expect = 9.7 Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 11/72 (15%) Frame = +3 Query: 102 GSKQIQNPKGAGLNHRGQLA-FGIRRTVQTLELSGRRRGEQ----------GELDVQRDL 248 GS++ P+ AG RG L G R + R RG G D RD Sbjct: 912 GSRERGPPRRAGSQERGPLRRAGSRERIPPRRAGSRERGPPRGPGSRERGLGRSDFGRDR 971 Query: 249 ALVDVEPGAGGE 284 EPG GGE Sbjct: 972 GPFRPEPGDGGE 983
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 6/67 (8%) Frame = +3 Query: 168 IRRTVQTLELSGRRRG------EQGELDVQRDLALVDVEPGAGGEPVSGAVVRAHGHLRG 329 +++ + +L+GR RG + E + AL +V P G +P+S + + HG + Sbjct: 240 VQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAQEHGKAKA 299 Query: 330 VHELEQL 350 H + Q+ Sbjct: 300 AHFMSQI 306
>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)| Length = 961 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 123 PKGAGLNHRGQLAFGIRRTVQTLELSGRRRGEQGELDVQRDLALVDVEPGA 275 P G+G R + +RR+V L L GRRR +Q +R + + PGA Sbjct: 303 PTGSGGKERSE-NLSLRRSVSELSLQGRRRRQQ-----ERRQQALSMAPGA 347 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,329,088 Number of Sequences: 219361 Number of extensions: 1018576 Number of successful extensions: 2916 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2912 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
