| Clone Name | rbaal11e12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234418.1|HVU234418 Hordeum vulgare partial mRNA; clone cMWG0680.uni Length = 302 Score = 561 bits (283), Expect = e-157 Identities = 293/295 (99%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 17 aatattggattcgaccgttacctctttaatttatatttatatttcaggatacaaaagggc 76 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 aatattggattcgaccgttacctctttaatttatatttatatttcaggatacaaaagggc 67 Query: 77 cttcacaaaaagaagaagaaaaattgctgcgatgttcagtcctcgtccacaaagatagtc 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 cttcacaaaaagaagaagaaaaattgctgcgatgttcagtcctcgtccacaaagatagtc 127 Query: 137 tcttgcttgaatagcccgccaaacacgggcctcacctccttcttgggagccggctgcatt 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 tcttgcttgaatagcccgccaaacacgggcctcacctccttcttgggagccggctgcatt 187 Query: 197 gttgcctgcttcaccttctgtgccaccggcttcacgacggccctc-tgcggtgccagctt 255 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 188 gttgcctgcttcaccttctgtgccaccggcttcacgacggccctcttgcggtgccagctt 247 Query: 256 cttggccttggcctggcctctcaccgtggcgatctgagctcttggttcctcctcg 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 248 cttggccttggcctggcctctcaccgtggcgatctgggctcttggttcctcctcg 302
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 113 bits (57), Expect = 5e-22 Identities = 165/201 (82%) Strand = Plus / Plus Query: 112 tcagtcctcgtccacaaagatagtctcttgcttgaatagcccgccaaacacgggcctcac 171 ||||||||| ||||||||||| || ||||||||||| || || ||||||||||||||||| Sbjct: 70519 tcagtcctcatccacaaagattgtttcttgcttgaagagtcccccaaacacgggcctcac 70578 Query: 172 ctccttcttgggagccggctgcattgttgcctgcttcaccttctgtgccaccggcttcac 231 ||| ||||| |||||||| ||| || | | |||||| ||| | |||||||| Sbjct: 70579 atccggcttggattccggctgctttggtgttggtcttgtcttctgcgccgcgggcttcac 70638 Query: 232 gacggccctctgcggtgccagcttcttggccttggcctggcctctcaccgtggcgatctg 291 || || ||||| |||||||||||||| || || |||||||||||||| ||||||||||| Sbjct: 70639 aacagctctctgtggtgccagcttctttgcttttgcctggcctctcacggtggcgatctg 70698 Query: 292 agctcttggttcctcctcgtc 312 ||| |||||||| ||||||| Sbjct: 70699 cgcttttggttccacctcgtc 70719 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 391 ccctttggctctggtcagaaggttctcca 419 ||||||||||||| ||||||||||||||| Sbjct: 70786 ccctttggctctgctcagaaggttctcca 70814
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 5e-22 Identities = 165/201 (82%) Strand = Plus / Plus Query: 112 tcagtcctcgtccacaaagatagtctcttgcttgaatagcccgccaaacacgggcctcac 171 ||||||||| ||||||||||| || ||||||||||| || || ||||||||||||||||| Sbjct: 12700232 tcagtcctcatccacaaagattgtttcttgcttgaagagtcccccaaacacgggcctcac 12700291 Query: 172 ctccttcttgggagccggctgcattgttgcctgcttcaccttctgtgccaccggcttcac 231 ||| ||||| |||||||| ||| || | | |||||| ||| | |||||||| Sbjct: 12700292 atccggcttggattccggctgctttggtgttggtcttgtcttctgcgccgcgggcttcac 12700351 Query: 232 gacggccctctgcggtgccagcttcttggccttggcctggcctctcaccgtggcgatctg 291 || || ||||| |||||||||||||| || || |||||||||||||| ||||||||||| Sbjct: 12700352 aacagctctctgtggtgccagcttctttgcttttgcctggcctctcacggtggcgatctg 12700411 Query: 292 agctcttggttcctcctcgtc 312 ||| |||||||| ||||||| Sbjct: 12700412 cgcttttggttccacctcgtc 12700432 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 391 ccctttggctctggtcagaaggttctcca 419 ||||||||||||| ||||||||||||||| Sbjct: 12700499 ccctttggctctgctcagaaggttctcca 12700527
>dbj|AK073234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024F08, full insert sequence Length = 1715 Score = 91.7 bits (46), Expect = 2e-15 Identities = 88/102 (86%) Strand = Plus / Minus Query: 211 cttctgtgccaccggcttcacgacggccctctgcggtgccagcttcttggccttggcctg 270 |||||| ||| | |||||||| || || ||||| |||||||||||||| || || ||||| Sbjct: 1418 cttctgcgccgcgggcttcacaacagctctctgtggtgccagcttctttgcttttgcctg 1359 Query: 271 gcctctcaccgtggcgatctgagctcttggttcctcctcgtc 312 ||||||||| ||||||||||| ||| |||||||| ||||||| Sbjct: 1358 gcctctcacggtggcgatctgcgcttttggttccacctcgtc 1317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 112 tcagtcctcgtccacaaagatagtctcttgcttgaatagcccgccaaacacgggcctcac 171 ||||||||| ||||||||||| || ||||||||||| || || ||||||||||||||||| Sbjct: 1517 tcagtcctcatccacaaagattgtttcttgcttgaagagtcccccaaacacgggcctcac 1458 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 391 ccctttggctctggtcagaaggttctcca 419 ||||||||||||| ||||||||||||||| Sbjct: 1250 ccctttggctctgctcagaaggttctcca 1222
>dbj|AK099865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111D24, full insert sequence Length = 1619 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 112 tcagtcctcgtccacaaagatagtctcttgcttgaatagcccgccaaacacgggcctcac 171 ||||||||| ||||||||||| || ||||||||||| || || ||||||||||||||||| Sbjct: 1472 tcagtcctcatccacaaagattgtttcttgcttgaagagtcccccaaacacgggcctcac 1413 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 391 ccctttggctctggtcagaaggttctcca 419 ||||||||||||| ||||||||||||||| Sbjct: 1238 ccctttggctctgctcagaaggttctcca 1210
>ref|XM_779212.1| PREDICTED: Strongylocentrotus purpuratus similar to eukaryotic translation initiation factor 4, gamma 2a (LOC579078), partial mRNA Length = 561 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 255 tcttggccttggcctggcctctc 277 ||||||||||||||||||||||| Sbjct: 478 tcttggccttggcctggcctctc 456
>ref|XM_777851.1| PREDICTED: Strongylocentrotus purpuratus similar to eukaryotic translation initiation factor 4 gamma, 2 (LOC577635), mRNA Length = 3644 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 255 tcttggccttggcctggcctctc 277 ||||||||||||||||||||||| Sbjct: 466 tcttggccttggcctggcctctc 444
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatatttca 62 |||||||||||||||||||||| Sbjct: 4029505 tttaatttatatttatatttca 4029484
>ref|XM_740042.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000108.03.0) partial mRNA Length = 2433 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 tctttaatttatatttatattt 60 |||||||||||||||||||||| Sbjct: 2152 tctttaatttatatttatattt 2131
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 cacaaaaagaagaagaaaaatt 101 |||||||||||||||||||||| Sbjct: 394 cacaaaaagaagaagaaaaatt 415
>gb|AC100839.2| Homo sapiens chromosome 15, clone RP11-625H11, complete sequence Length = 161309 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 tttaatttatatttatatttcaggat 66 ||||||||||||||| |||||||||| Sbjct: 48696 tttaatttatatttacatttcaggat 48721
>gb|AC068233.11| Homo sapiens chromosome 15, clone RP11-169M2, complete sequence Length = 177483 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 41 tttaatttatatttatatttcaggat 66 ||||||||||||||| |||||||||| Sbjct: 35985 tttaatttatatttacatttcaggat 35960
>gb|AC005768.17|AC005768 Homo sapiens chromosome 4 clone C0315N08, complete sequence Length = 190544 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 acaaaaagaagaagaaaaattg 102 |||||||||||||||||||||| Sbjct: 163450 acaaaaagaagaagaaaaattg 163471
>gb|AC154113.1| Medicago truncatula chromosome 2 BAC clone mte1-25a23, complete sequence Length = 42983 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 caaaaagaagaagaaaaattg 102 ||||||||||||||||||||| Sbjct: 15315 caaaaagaagaagaaaaattg 15295
>ref|XM_641233.1| Dictyostelium discoideum hypothetical protein (DDB0190597), partial mRNA Length = 1491 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 acaaaaagaagaagaaaaatt 101 ||||||||||||||||||||| Sbjct: 336 acaaaaagaagaagaaaaatt 356
>gb|AY686596.1| Apis mellifera Dscam gene, complete cds, alternatively spliced Length = 116066 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 tatttatatttcaggatacaa 70 ||||||||||||||||||||| Sbjct: 72644 tatttatatttcaggatacaa 72664
>gb|AE002122.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 23 of 59 of the complete genome Length = 20866 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cttcacaaaaagaagaagaaa 97 ||||||||||||||||||||| Sbjct: 9166 cttcacaaaaagaagaagaaa 9186
>gb|AC166829.3| Mus musculus BAC clone RP23-299M19 from chromosome 1, complete sequence Length = 211292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ctcacctccttcttgggagcc 187 ||||||||||||||||||||| Sbjct: 122718 ctcacctccttcttgggagcc 122738
>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence Length = 160339 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 aaaaagaagaagaaaaattgc 103 ||||||||||||||||||||| Sbjct: 106621 aaaaagaagaagaaaaattgc 106641
>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), complete sequence Length = 148875 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 cttggccttggcctggcctct 276 ||||||||||||||||||||| Sbjct: 51412 cttggccttggcctggcctct 51392
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence Length = 174914 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 tggccttggcctggcctctca 278 ||||||||||||||||||||| Sbjct: 124947 tggccttggcctggcctctca 124967
>gb|AY106970.1| Zea mays PCO080628 mRNA sequence Length = 419 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 243 gcggtgccagcttcttggccttggcctggcctctcaccgtggcgatctg 291 |||||||||||||||| || || ||||||||| ||| ||||| ||||| Sbjct: 144 gcggtgccagcttcttcgctttttcctggcctcgcacagtggctatctg 96
>ref|XM_520107.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC464565), mRNA Length = 1779 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 143 aaaagggccttcaaaaaaagaaga 166
>gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7 of 7 of the complete sequence Length = 180450 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 50884 tttaatttatatttatattt 50903
>ref|NM_025988.1| Mus musculus acyl-Coenzyme A binding domain containing 4 (Acbd4), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 759 tcaccttctgtgccaccagcttca 736
>gb|AC007589.8| Drosophila melanogaster clone BACR20D10, complete sequence Length = 164712 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 82263 tttaatttatatttatattt 82282
>gb|AY338208.1| Tarsius bancanus cryopyrin (CIAS1) gene, partial cds Length = 1313 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cagcttcttggccttggcct 269 |||||||||||||||||||| Sbjct: 1171 cagcttcttggccttggcct 1152
>gb|AY495379.1| Erinaceus europaeus cryopyrin (CIAS1) gene, partial cds Length = 1113 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cagcttcttggccttggcct 269 |||||||||||||||||||| Sbjct: 1066 cagcttcttggccttggcct 1047
>ref|XM_593939.2| PREDICTED: Bos taurus similar to acyl-Coenzyme A binding domain containing 4 (LOC515848), mRNA Length = 1702 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 481 tcaccttctgtgccaccagcttca 458
>gb|BC076781.1| Xenopus laevis ectoderm neural cortex related-2, mRNA (cDNA clone MGC:83685 IMAGE:6638045), complete cds Length = 2027 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 tcagtgctaagcttaagccctttg 397 |||||||||||||||||| ||||| Sbjct: 1521 tcagtgctaagcttaagctctttg 1544
>gb|AE017335.3| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence Length = 94830 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttatatttcaggatacaaa 71 |||||||||||||||||||| Sbjct: 72967 tttatatttcaggatacaaa 72986
>gb|AC185247.2| Pan troglodytes BAC clone CH251-7D5 from chromosome 15, complete sequence Length = 175295 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 36942 taatttatatttatatttca 36923
>gb|AC148025.2| Homo sapiens BAC clone RP11-347N4 from UL, complete sequence Length = 198348 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 179517 taatttatatttatatttca 179536
>ref|XM_868267.1| PREDICTED: Bos taurus similar to trinucleotide repeat containing 15, transcript variant 2 (LOC506913), mRNA Length = 5680 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagaagaaaaattgctg 105 |||||||||||||||||||| Sbjct: 3378 aagaagaagaaaaattgctg 3397
>ref|XM_881454.1| PREDICTED: Bos taurus similar to trinucleotide repeat containing 15, transcript variant 3 (LOC506913), mRNA Length = 5670 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagaagaaaaattgctg 105 |||||||||||||||||||| Sbjct: 3368 aagaagaagaaaaattgctg 3387
>ref|XM_583430.2| PREDICTED: Bos taurus similar to trinucleotide repeat containing 15, transcript variant 1 (LOC506913), mRNA Length = 5460 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagaagaaaaattgctg 105 |||||||||||||||||||| Sbjct: 3158 aagaagaagaaaaattgctg 3177
>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome Length = 110907 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cacaaaaagaagaagaaaaa 99 |||||||||||||||||||| Sbjct: 11138 cacaaaaagaagaagaaaaa 11157
>gb|AC146514.4| Pan troglodytes BAC clone CH251-103N3 from Y, complete sequence Length = 194348 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 105761 tttaatttatatttatattt 105742
>gb|AC145889.4| Pan troglodytes BAC clone RP43-8B7 from 7, complete sequence Length = 174930 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 5052 taatttatatttatatttca 5033
>ref|NM_024617.2| Homo sapiens zinc finger, CCHC domain containing 6 (ZCCHC6), mRNA Length = 5648 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 358 aaaagggccttcaaaaaaagaaga 381
>gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence Length = 257109 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 14507 tttaatttatatttatattt 14488
>gb|AC113542.13| Mus musculus chromosome 5, clone RP23-195A18, complete sequence Length = 215127 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 56836 tttaatttatatttatattt 56817
>gb|BC016387.1| Homo sapiens zinc finger, CCHC domain containing 6, mRNA (cDNA clone IMAGE:4721899), partial cds Length = 721 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 46 aaaagggccttcaaaaaaagaaga 69
>gb|AC141283.3| Homo sapiens chromosome 16 clone RP11-347N4, complete sequence Length = 198348 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 179517 taatttatatttatatttca 179536
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete sequence Length = 196531 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tctttaatttatatttatat 58 |||||||||||||||||||| Sbjct: 9665 tctttaatttatatttatat 9684
>gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, complete sequence Length = 186750 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acaaaaagaagaagaaaaat 100 |||||||||||||||||||| Sbjct: 83207 acaaaaagaagaagaaaaat 83188
>gb|AC079456.28| Homo sapiens 12 BAC RP11-206B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177640 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 5504 aaaaagaagaagaaaaattg 5485
>gb|AC114915.3| Mus musculus BAC clone RP23-54K21 from 2, complete sequence Length = 257013 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 122172 tttaatttatatttatattt 122153
>emb|BX890551.14| Zebrafish DNA sequence from clone CH211-232K18, complete sequence Length = 151758 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 10027 tttaatttatatttatattt 10046
>gb|AC098736.4| Mus musculus BAC clone RP23-122B3 from 1, complete sequence Length = 211208 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 39915 tttaatttatatttatattt 39934
>gb|AC104057.4| Homo sapiens BAC clone RP13-157F18 from 7, complete sequence Length = 196523 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 48861 taatttatatttatatttca 48842
>gb|AF188935.1| Bacillus anthracis plasmid pXO2, complete sequence Length = 96231 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttatatttcaggatacaaa 71 |||||||||||||||||||| Sbjct: 73437 tttatatttcaggatacaaa 73456
>gb|AY216792.1| Xenopus laevis ectoderm neural cortex related-2 (Encr-2) mRNA, partial cds Length = 1063 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 tcagtgctaagcttaagccctttg 397 |||||||||||||||||| ||||| Sbjct: 588 tcagtgctaagcttaagctctttg 611
>emb|CR626910.5| Zebrafish DNA sequence from clone DKEY-204E20 in linkage group 14, complete sequence Length = 168298 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 4362 tttaatttatatttatattt 4381
>gb|BC112885.1| Bos taurus similar to acyl-Coenzyme A binding domain containing 4, mRNA (cDNA clone MGC:137561 IMAGE:8180725), complete cds Length = 1736 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 496 tcaccttctgtgccaccagcttca 473
>emb|AL359955.25| Human DNA sequence from clone RP11-460N11 on chromosome 9 Contains a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) a immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a zinc finger pseudogene, a pseudogene similar to tripartite motif-containing protein and two CpG islands, complete sequence Length = 165474 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 109402 taatttatatttatatttca 109383
>emb|AL353678.11| Human DNA sequence from clone RP11-229M1 on chromosome 9 Contains the 5' end of a novel gene (FLJ13409), a ribosomal protein S6 (RPS6) pseudogene and a CpG island, complete sequence Length = 69182 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 37372 aaaagggccttcaaaaaaagaaga 37349
>emb|AL138715.11| Human DNA sequence from clone RP11-77P19 on chromosome 13 Contains a novel zinc finger protein pseudogene, a novel gene, the 5' end of a novel gene and a CpG island, complete sequence Length = 161183 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 64607 taatttatatttatatttca 64626
>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33, complete sequence Length = 102739 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 47922 aaaaagaagaagaaaaattg 47941
>emb|CR936608.1| Homo sapiens mRNA; cDNA DKFZp686I1269 (from clone DKFZp686I1269) Length = 5704 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 315 aaaagggccttcaaaaaaagaaga 338
>emb|CR933644.1| Homo sapiens mRNA; cDNA DKFZp686F119 (from clone DKFZp686F119) Length = 6139 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 318 aaaagggccttcaaaaaaagaaga 341
>emb|CR933643.1| Homo sapiens mRNA; cDNA DKFZp686C11112 (from clone DKFZp686C11112) Length = 5560 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 258 aaaagggccttcaaaaaaagaaga 281
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 atatttcaggatacaaaagg 74 |||||||||||||||||||| Sbjct: 2118102 atatttcaggatacaaaagg 2118083
>emb|BX537106.6| Zebrafish DNA sequence from clone DKEY-98P3 in linkage group 20 Contains the gene for a novel protein similar to vertebrate dermatopontin (DPT), the atp1b1a gene for ATPase, Na+/K+ transporting, beta 1a polypeptide, the gene for a novel protein containing a homocysteine S-methyltransferase domain, the bivm gene for basic, immunoglobulin-like variable motif containing, the 5' end of the gene for a novel zinc finger protein (wu:fc06h02), the ndpkz4 gene for nucleoside diphosphate kinase-Z4 and the gene for a novel protein containing an inosine-uridine preferring nucleoside hydrolase doamin, complete sequence Length = 162005 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 37962 tttaatttatatttatattt 37981
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gccagcttcttggccttggc 267 |||||||||||||||||||| Sbjct: 292589 gccagcttcttggccttggc 292570
>emb|CR352255.9| Zebrafish DNA sequence from clone CH211-118E10 in linkage group 24, complete sequence Length = 161221 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cacaaaaagaagaagaaaaa 99 |||||||||||||||||||| Sbjct: 98714 cacaaaaagaagaagaaaaa 98733
>emb|BX901927.7| Zebrafish DNA sequence from clone CH211-243A20 in linkage group 1, complete sequence Length = 152042 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ttcacaaaaagaagaagaaa 97 |||||||||||||||||||| Sbjct: 101754 ttcacaaaaagaagaagaaa 101773
>emb|CR361560.10| Zebrafish DNA sequence from clone CH211-122G18 in linkage group 24, complete sequence Length = 184660 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cacaaaaagaagaagaaaaa 99 |||||||||||||||||||| Sbjct: 154938 cacaaaaagaagaagaaaaa 154957
>gb|AC183272.3| Pan troglodytes BAC clone CH251-396D11 from chromosome 18, complete sequence Length = 146035 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 128503 taatttatatttatatttca 128522
>emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 in linkage group 13, complete sequence Length = 134841 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 19447 tttaatttatatttatattt 19466
>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence Length = 142102 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 tttatatttatatttcagga 65 |||||||||||||||||||| Sbjct: 61188 tttatatttatatttcagga 61169
>emb|AL832193.1|HSM803500 Homo sapiens mRNA; cDNA DKFZp686C032 (from clone DKFZp686C032) Length = 5856 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 315 aaaagggccttcaaaaaaagaaga 338
>emb|AL832026.1|HSM803333 Homo sapiens mRNA; cDNA DKFZp451K134 (from clone DKFZp451K134) Length = 4956 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 358 aaaagggccttcaaaaaaagaaga 381
>dbj|BS000647.3| Pan troglodytes chromosome Y clone: PTBY-005A21, complete sequence Length = 106685 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 86632 tttaatttatatttatattt 86613
>dbj|BS000629.2| Pan troglodytes chromosome Y clone: PTB-194O02, complete sequence Length = 184689 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 3192 tttaatttatatttatattt 3173
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 18138509 tttaatttatatttatattt 18138528
>gb|AE011191.1| Bacillus anthracis str. A2012 plasmid pXO2, complete sequence Length = 94829 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tttatatttcaggatacaaa 71 |||||||||||||||||||| Sbjct: 72966 tttatatttcaggatacaaa 72985
>gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172105 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccgtgcagccgctcctgcgg 338 |||||||||||||||||||| Sbjct: 47155 ccgtgcagccgctcctgcgg 47136
>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153733 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccgtgcagccgctcctgcgg 338 |||||||||||||||||||| Sbjct: 89649 ccgtgcagccgctcctgcgg 89630
>emb|CR616935.1| full-length cDNA clone CS0DA004YC03 of Neuroblastoma of Homo sapiens (human) Length = 1683 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 302 aaaagggccttcaaaaaaagaaga 325
>gb|AC122174.18| Pan troglodytes clone rp43-98a5, complete sequence Length = 148732 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 51258 taatttatatttatatttca 51277
>gb|AC148778.9| Gasterosteus aculeatus clone uogacrs-8a1-1, complete sequence Length = 34830 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 12768 aaaaagaagaagaaaaattg 12749
>gb|AC148608.6| Gasterosteus aculeatus clone uogacrs-6h10-1, complete sequence Length = 36842 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 13934 aaaaagaagaagaaaaattg 13915
>dbj|AK055546.1| Homo sapiens cDNA FLJ30984 fis, clone HHDPC2000456 Length = 2424 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 316 aaaagggccttcaaaaaaagaaga 339
>ref|NM_132582.1| Drosophila melanogaster CG1824-RA (CG1824), mRNA Length = 2530 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ccgtgcagccgctcctgcgg 338 |||||||||||||||||||| Sbjct: 1472 ccgtgcagccgctcctgcgg 1453
>gb|AC018642.7| Homo sapiens chromosome 7 clone RP11-329I5, complete sequence Length = 194523 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 acaaaaagaagaagaaaaat 100 |||||||||||||||||||| Sbjct: 60356 acaaaaagaagaagaaaaat 60375
>dbj|AK148438.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370148K09 product:acyl-Coenzyme A binding domain containing 4, full insert sequence Length = 3781 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 340 tcaccttctgtgccaccagcttca 317
>gb|AC010867.8| Homo sapiens chromosome 15 clone RP11-390M11 map 15q21.3, complete sequence Length = 221631 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 77159 aaaaagaagaagaaaaattg 77140
>gb|AC123427.5| Rattus norvegicus 2 BAC CH230-523K1 (Children's Hospital Oakland Research Institute) complete sequence Length = 200687 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gtgccagcttcttggccttg 265 |||||||||||||||||||| Sbjct: 64293 gtgccagcttcttggccttg 64312
>gb|AC009212.5| Drosophila melanogaster, chromosome 3R, region 82E-82F, BAC clone BACR01A18, complete sequence Length = 190801 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 49047 tttaatttatatttatattt 49066
>dbj|AK079604.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330066P17 product:RIKEN cDNA 2010015A21 gene, full insert sequence Length = 1950 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 714 tcaccttctgtgccaccagcttca 691
>gb|AC092854.14| Homo sapiens chromosome 22 clone rp11-39n6 map 22q11, complete sequence Length = 163955 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 126341 taatttatatttatatttca 126360
>dbj|AK008243.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010015A21 product:weakly similar to OVARC1001713 PROTEIN [Homo sapiens], full insert sequence Length = 1630 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 394 tcaccttctgtgccaccagcttca 371
>dbj|AK008170.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010009P05 product:RIKEN cDNA 2010009P05 gene, full insert sequence Length = 1062 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 378 tcaccttctgtgccaccagcttca 355
>gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6, complete sequence Length = 194079 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 136186 tttaatttatatttatattt 136167
>gb|AC113191.13| Homo sapiens chromosome 8, clone RP11-598P20, complete sequence Length = 166669 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 103481 tttaatttatatttatattt 103500
>gb|AC082651.6| Homo sapiens BAC clone RP11-521D12 from 2, complete sequence Length = 203770 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 64266 aaaaagaagaagaaaaattg 64247
>gb|AY011261.1| Sorex araneus beta-2 adrenergic receptor (ADRB2) gene, partial cds Length = 663 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgggcctcacctccttcttg 181 |||||||||||||||||||| Sbjct: 299 cgggcctcacctccttcttg 318
>gb|AY011255.1| Chaetophractus villosus beta-2 adrenergic receptor (ADRB2) gene, partial cds Length = 822 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgggcctcacctccttcttg 181 |||||||||||||||||||| Sbjct: 324 cgggcctcacctccttcttg 343
>gb|AY011254.1| Euphractus sexcinctus beta-2 adrenergic receptor (ADRB2) gene, partial cds Length = 827 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cgggcctcacctccttcttg 181 |||||||||||||||||||| Sbjct: 329 cgggcctcacctccttcttg 348
>gb|AC133561.4| Homo sapiens chromosome 16 clone RP11-598D12, complete sequence Length = 169866 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 138025 taatttatatttatatttca 138044
>gb|AC095349.10| Homo sapiens 3 BAC RP11-714D16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182618 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ttaatttatatttatatttc 61 |||||||||||||||||||| Sbjct: 132342 ttaatttatatttatatttc 132361
>gb|AC009783.9|AC009783 Homo sapiens chromosome 7 clone RP11-14M12, complete sequence Length = 169326 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acaaaaagaagaagaaaaat 100 |||||||||||||||||||| Sbjct: 50817 acaaaaagaagaagaaaaat 50798
>gb|AC093787.3| Homo sapiens BAC clone RP11-215P9 from 2, complete sequence Length = 86945 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 70232 taatttatatttatatttca 70213
>gb|AF383679.2| Jaegeria hirta NADH dehydrogenase subunit 6 (ndhG) gene, partial cds; ndhG-ndhI intergenic spacer region, partial sequence; chloroplast gene for chloroplast product Length = 378 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 287 tttaatttatatttatattt 268
>gb|AC129959.6| Bos taurus, clone RP42-518P7, complete sequence Length = 211988 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagaagaagaaaaattgctg 105 |||||||||||||||||||| Sbjct: 161403 aagaagaagaaaaattgctg 161384
>ref|XM_573203.1| PREDICTED: Rattus norvegicus acyl-Coenzyme A binding domain containing 4 (predicted) (Acbd4_predicted), mRNA Length = 1787 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 580 tcaccttctgtgccaccagcttca 557
>gb|AC096650.1| Homo sapiens BAC clone RP11-16H9 from 2, complete sequence Length = 33716 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 21881 tttaatttatatttatattt 21900
>gb|AC006565.4|AC006565 Homo sapiens chromosome Y, clone CTC-484O7, complete sequence Length = 46879 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 16538 tttaatttatatttatattt 16519
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 340841 aaaaagaagaagaaaaattg 340860
>dbj|BS000112.1| Pan troglodytes chromosome 22 clone:RP43-076J24, map 22, complete sequences Length = 169786 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gttgcctgcttcaccttctg 216 |||||||||||||||||||| Sbjct: 77477 gttgcctgcttcaccttctg 77496
>emb|BX641077.1|HSM806874 Homo sapiens mRNA; cDNA DKFZp686E246 (from clone DKFZp686E246) Length = 6419 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 367 aaaagggccttcaaaaaaagaaga 390
>emb|BX469935.5| Zebrafish DNA sequence from clone CH211-244H1 in linkage group 21, complete sequence Length = 171507 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 acaaaaagaagaagaaaaat 100 |||||||||||||||||||| Sbjct: 99285 acaaaaagaagaagaaaaat 99304
>emb|AL929201.6| Zebrafish DNA sequence from clone CH211-66G24 in linkage group 8, complete sequence Length = 186121 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 22577 tttaatttatatttatattt 22558
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 40550 tttaatttatatttatattt 40531
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 acaaaaagaagaagaaaaat 100 |||||||||||||||||||| Sbjct: 576955 acaaaaagaagaagaaaaat 576974
>emb|Z92833.1|CEF38A6 Caenorhabditis elegans Cosmid F38A6, complete sequence Length = 36256 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 19348 tttaatttatatttatattt 19367
>gb|BC048371.1| Mus musculus acyl-Coenzyme A binding domain containing 4, mRNA (cDNA clone MGC:56753 IMAGE:6396076), complete cds Length = 2016 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 759 tcaccttctgtgccaccagcttca 736
>emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 in linkage group 19, complete sequence Length = 143150 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ttacctctttaatttatatt 53 |||||||||||||||||||| Sbjct: 88557 ttacctctttaatttatatt 88576
>emb|AL445643.12| Human DNA sequence from clone RP11-350D23 on chromosome 9, complete sequence Length = 188693 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 62187 taatttatatttatatttca 62168
>gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 of 74 of the complete sequence Length = 291799 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ccgtgcagccgctcctgcgg 338 |||||||||||||||||||| Sbjct: 261712 ccgtgcagccgctcctgcgg 261731
>emb|AL162832.6|CNS01RI3 Human chromosome 14 DNA sequence BAC R-544I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158424 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acaaaaagaagaagaaaaat 100 |||||||||||||||||||| Sbjct: 36457 acaaaaagaagaagaaaaat 36438
>gb|AE003604.4| Drosophila melanogaster chromosome 3R, section 4 of 118 of the complete sequence Length = 303434 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 177244 tttaatttatatttatattt 177263
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gttgcctgcttcaccttctg 216 |||||||||||||||||||| Sbjct: 80771 gttgcctgcttcaccttctg 80790
>dbj|AP005901.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-454P7, complete sequence Length = 194034 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 66861 taatttatatttatatttca 66842
>gb|BC076387.1| Rattus norvegicus acyl-Coenzyme A binding domain containing 4, mRNA (cDNA clone MGC:93783 IMAGE:7109482), complete cds Length = 1816 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 580 tcaccttctgtgccaccagcttca 557
>gb|BC032456.1| Homo sapiens zinc finger, CCHC domain containing 6, mRNA (cDNA clone IMAGE:5172299), complete cds Length = 1614 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aaaagggccttcacaaaaagaaga 92 ||||||||||||| |||||||||| Sbjct: 298 aaaagggccttcaaaaaaagaaga 321
>ref|NM_001012013.1| Rattus norvegicus acyl-Coenzyme A binding domain containing 4 (Acbd4), mRNA Length = 1816 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tcaccttctgtgccaccggcttca 230 ||||||||||||||||| |||||| Sbjct: 580 tcaccttctgtgccaccagcttca 557
>emb|AL929382.9| Mouse DNA sequence from clone RP23-136C24 on chromosome X, complete sequence Length = 201060 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 76484 tttaatttatatttatattt 76465
>emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17, complete sequence Length = 164375 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 31579 tttaatttatatttatattt 31560
>emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in linkage group 3, complete sequence Length = 145564 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ttgcctgcttcaccttctgt 217 |||||||||||||||||||| Sbjct: 36642 ttgcctgcttcaccttctgt 36661
>emb|AL928690.9| Mouse DNA sequence from clone RP23-443L19 on chromosome 2, complete sequence Length = 98535 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 85224 tttaatttatatttatattt 85243
>emb|AL773548.10| Mouse DNA sequence from clone RP23-70D2 on chromosome 4, complete sequence Length = 198991 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aaaaagaagaagaaaaattg 102 |||||||||||||||||||| Sbjct: 35099 aaaaagaagaagaaaaattg 35118
>emb|AL672067.5| Mouse DNA sequence from clone RP23-5P1 on chromosome X, complete sequence Length = 225196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 102902 tttaatttatatttatattt 102883
>emb|Z82252.6|HSN91G8 Human DNA sequence from clone LL22NC03-91G8 on chromosome 22, complete sequence Length = 42528 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 taatttatatttatatttca 62 |||||||||||||||||||| Sbjct: 36493 taatttatatttatatttca 36512
>emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chromosome 4, complete sequence Length = 211998 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 tttaatttatatttatattt 60 |||||||||||||||||||| Sbjct: 64844 tttaatttatatttatattt 64825
>dbj|AB032059.1| Mesembryanthemum crystallinum McMipA gene for PIP aquaporin, promoter region and partial cds Length = 2438 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 ttcacaaaaagaagaagaaaaatt 101 ||||||||||||| |||||||||| Sbjct: 270 ttcacaaaaagaaaaagaaaaatt 247
>dbj|AP000563.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:PQ8P9, D21S226-AML region, complete sequence Length = 68581 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gttgcctgcttcaccttctg 216 |||||||||||||||||||| Sbjct: 2081 gttgcctgcttcaccttctg 2100
>dbj|AP000210.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 8/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gttgcctgcttcaccttctg 216 |||||||||||||||||||| Sbjct: 93759 gttgcctgcttcaccttctg 93778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,881,183 Number of Sequences: 3902068 Number of extensions: 5881183 Number of successful extensions: 210256 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 209569 Number of HSP's gapped (non-prelim): 686 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)