| Clone Name | rbaal11e03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR762485.16| Zebrafish DNA sequence from clone DKEY-269K12 in linkage group 19, complete sequence Length = 171225 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 505 acaaacataaaaaacaaggtaa 526 |||||||||||||||||||||| Sbjct: 44404 acaaacataaaaaacaaggtaa 44383
>gb|AC073943.5|AC073943 Arabidopsis thaliana chromosome 1 BAC F16M22 genomic sequence, complete sequence Length = 61919 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 gaacaagaaaaatcaatttaacaaag 558 ||||||||||||| |||||||||||| Sbjct: 2702 gaacaagaaaaataaatttaacaaag 2727
>gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18I24 genomic sequence, complete sequence Length = 85961 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 533 gaacaagaaaaatcaatttaacaaag 558 ||||||||||||| |||||||||||| Sbjct: 39481 gaacaagaaaaataaatttaacaaag 39506
>emb|CR933784.6| Zebrafish DNA sequence from clone CH211-10D14 in linkage group 19, complete sequence Length = 3994 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 505 acaaacataaaaaacaaggtaa 526 |||||||||||||||||||||| Sbjct: 1252 acaaacataaaaaacaaggtaa 1273
>emb|BX649545.14| Zebrafish DNA sequence from clone CH211-9N13 in linkage group 19, complete sequence Length = 169802 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 505 acaaacataaaaaacaaggtaa 526 |||||||||||||||||||||| Sbjct: 749 acaaacataaaaaacaaggtaa 728
>ref|NM_105343.2| Arabidopsis thaliana ATP binding / DNA ligase (ATP) AT1G66730 mRNA, complete cds Length = 4337 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 536 caagaaaaatcaatttaacaaaggg 560 |||||||||| |||||||||||||| Sbjct: 1759 caagaaaaatgaatttaacaaaggg 1783
>gb|AC134460.4| Mus musculus BAC clone RP23-373D18 from chromosome 10, complete sequence Length = 174545 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 tttaacaaagggaacattaca 569 ||||||||||||||||||||| Sbjct: 60261 tttaacaaagggaacattaca 60241
>gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete sequence Length = 99811 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 aagaaaaatcaatttaacaaa 557 ||||||||||||||||||||| Sbjct: 87586 aagaaaaatcaatttaacaaa 87606
>gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, complete sequence Length = 208939 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ggacactgaaatctcttgaga 131 ||||||||||||||||||||| Sbjct: 138902 ggacactgaaatctcttgaga 138922
>gb|AC013288.7|AC013288 Arabidopsis thaliana chromosome 1 BAC F4N21 genomic sequence, complete sequence Length = 96899 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 536 caagaaaaatcaatttaacaaaggg 560 |||||||||| |||||||||||||| Sbjct: 70224 caagaaaaatgaatttaacaaaggg 70200
>gb|AC153533.4| Mus musculus 10 BAC RP23-474K10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 tttaacaaagggaacattaca 569 ||||||||||||||||||||| Sbjct: 182603 tttaacaaagggaacattaca 182623
>gb|AC169505.1| Mus musculus BAC clone RP24-257J8 from chromosome 16, complete sequence Length = 138498 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 caaaatattttcaaaaaagt 596 |||||||||||||||||||| Sbjct: 10343 caaaatattttcaaaaaagt 10362
>gb|AC108393.10| Mus musculus chromosome 3, clone RP23-388A19, complete sequence Length = 178878 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 96077 aaatattttcaaaaaagtta 96096
>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence Length = 268516 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 ctgcacaaacataaaaaaca 520 |||||||||||||||||||| Sbjct: 94250 ctgcacaaacataaaaaaca 94269
>gb|AC160473.4| Mus musculus BAC clone RP23-123N21 from chromosome 12, complete sequence Length = 198634 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 aaacataaaaaacaaggtaa 526 |||||||||||||||||||| Sbjct: 111065 aaacataaaaaacaaggtaa 111084
>gb|AC108318.8| Rattus norvegicus 2 BAC CH230-256E18 (Children's Hospital Oakland Research Institute) complete sequence Length = 210322 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 atatagaccaaaatattttc 588 |||||||||||||||||||| Sbjct: 173017 atatagaccaaaatattttc 172998
>gb|AC146084.2| Pan troglodytes BAC clone RP43-56L21 from 7, complete sequence Length = 152170 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ttgtttgaatagttccaaac 336 |||||||||||||||||||| Sbjct: 25183 ttgtttgaatagttccaaac 25164
>gb|U13642.1| Caenorhabditis elegans cosmid ZC395, complete sequence Length = 28883 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 aaaatattttcaaaaaagtt 597 |||||||||||||||||||| Sbjct: 15706 aaaatattttcaaaaaagtt 15687
>gb|AC005026.2| Homo sapiens BAC clone GS1-489L14 from 7, complete sequence Length = 123526 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 ctgcaaaacagaaaggagta 633 |||||||||||||||||||| Sbjct: 89867 ctgcaaaacagaaaggagta 89886
>emb|CR478208.13| Zebrafish DNA sequence from clone CH211-149M3 in linkage group 16, complete sequence Length = 195111 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gttttgaagtttcagtggct 304 |||||||||||||||||||| Sbjct: 159278 gttttgaagtttcagtggct 159259
>emb|Z82272.1|CEF55G11 Caenorhabditis elegans Cosmid F55G11, complete sequence Length = 28923 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 aaaatattttcaaaaaagtt 597 |||||||||||||||||||| Sbjct: 12111 aaaatattttcaaaaaagtt 12092
>emb|Z81568.1|CEK08E3 Caenorhabditis elegans Cosmid K08E3, complete sequence Length = 39565 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 12927 accaaaatattttcaaaaaa 12908
>emb|Z81534.1|CEF37H8 Caenorhabditis elegans Cosmid F37H8, complete sequence Length = 38908 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 18907 aaatattttcaaaaaagtta 18926 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 18508 aaatattttcaaaaaagtta 18527 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 18308 aaatattttcaaaaaagtta 18327 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 17708 aaatattttcaaaaaagtta 17727 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 17508 aaatattttcaaaaaagtta 17527 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 17108 aaatattttcaaaaaagtta 17127
>emb|CR774185.17| Zebrafish DNA sequence from clone CH211-237H18 in linkage group 13, complete sequence Length = 154017 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gttttgaagtttcagtggct 304 |||||||||||||||||||| Sbjct: 47902 gttttgaagtttcagtggct 47883
>gb|AC124573.4| Mus musculus BAC clone RP23-159F13 from 10, complete sequence Length = 191206 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 ctgcacaaacataaaaaaca 520 |||||||||||||||||||| Sbjct: 149704 ctgcacaaacataaaaaaca 149723
>gb|AC115825.11| Mus musculus chromosome 9, clone RP23-444E13, complete sequence Length = 192100 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 53138 aaatattttcaaaaaagtta 53119
>ref|XM_719025.1| Plasmodium yoelii yoelii str. 17XNL ATP-dependent RNA helicase mitochondrial precursor (PY03896) partial mRNA Length = 1686 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 atatagaccaaaatattttc 588 |||||||||||||||||||| Sbjct: 915 atatagaccaaaatattttc 934
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence Length = 215747 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ttccaaacctctcttctgct 348 |||||||||||||||||||| Sbjct: 46165 ttccaaacctctcttctgct 46184
>gb|AC004879.2| Homo sapiens PAC clone RP4-755G17 from 7, complete sequence Length = 134904 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ttgtttgaatagttccaaac 336 |||||||||||||||||||| Sbjct: 129119 ttgtttgaatagttccaaac 129138
>gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-182g1, complete sequence Length = 47909 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 cagaacaagaaaaatcaatt 550 |||||||||||||||||||| Sbjct: 35823 cagaacaagaaaaatcaatt 35842
>gb|AC159100.2| Mus musculus BAC clone RP24-248F9 from chromosome 9, complete sequence Length = 161485 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atcttcacagatcttgcttt 150 |||||||||||||||||||| Sbjct: 147868 atcttcacagatcttgcttt 147887
>emb|AL604028.15| Human DNA sequence from clone RP11-767N6 on chromosome 1 Contains the gene for a novel protein (SP192) (DKFZp434H1428, FLJ21319), a ribosomal protein S15a (RPS15A) pseudogene, a ribosomal protein L7a (RPL7A) pseudogene, the gene for a novel protein (FLJ21029) and one CpG island, complete sequence Length = 82964 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 cataaaaaacaaggtaacac 529 |||||||||||||||||||| Sbjct: 77517 cataaaaaacaaggtaacac 77536
>emb|AL160056.16| Human DNA sequence from clone RP11-239F3 on chromosome 1, complete sequence Length = 169491 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 aaaaaagttagcacctggtt 608 |||||||||||||||||||| Sbjct: 103988 aaaaaagttagcacctggtt 103969
>gb|AC124653.5| Homo sapiens chromosome 11, clone RP11-100H14, complete sequence Length = 151313 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 agaaaaatcaatttaacaaa 557 |||||||||||||||||||| Sbjct: 135347 agaaaaatcaatttaacaaa 135366
>emb|CR394547.7| Zebrafish DNA sequence from clone CH211-127P22 in linkage group 16, complete sequence Length = 151129 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gttttgaagtttcagtggct 304 |||||||||||||||||||| Sbjct: 119593 gttttgaagtttcagtggct 119574
>gb|AC011478.3| Homo sapiens chromosome 19 clone CTC-565M22, complete sequence Length = 100147 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 26349 cctctcttctgctgatgatt 26330
>emb|BX530015.9| Zebrafish DNA sequence from clone DKEY-262K23 in linkage group 11, complete sequence Length = 101327 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tttgaagtttcagtggcttc 306 |||||||||||||||||||| Sbjct: 87382 tttgaagtttcagtggcttc 87363
>gb|AC023693.4| Drosophila melanogaster X BAC RP98-17B23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164969 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 attttcaaaaaagttagcac 602 |||||||||||||||||||| Sbjct: 103443 attttcaaaaaagttagcac 103424
>gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, complete sequence Length = 168473 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 agaaaaatcaatttaacaaa 557 |||||||||||||||||||| Sbjct: 95216 agaaaaatcaatttaacaaa 95197
>gb|AC084881.19| Homo sapiens 12 BAC RP11-768F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194598 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 577 caaaatattttcaaaaaagttagc 600 |||||||||||||||||| ||||| Sbjct: 100778 caaaatattttcaaaaaacttagc 100755
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 tcttcacagatcttgctttggatc 155 ||||||||||||||||||| |||| Sbjct: 184326 tcttcacagatcttgctttcgatc 184349
>gb|AC036101.6| Homo sapiens chromosome 10 clone RP11-71J2, complete sequence Length = 175492 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 attttcaaaaaagttagcac 602 |||||||||||||||||||| Sbjct: 64939 attttcaaaaaagttagcac 64958
>gb|AC090970.3| Homo sapiens chromosome 15 clone CTD-2650P22 map 15q21, complete sequence Length = 187399 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 578 aaaatattttcaaaaaagttagca 601 |||||||||| ||||||||||||| Sbjct: 105206 aaaatattttaaaaaaagttagca 105229
>gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-45n16, complete sequence Length = 107886 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 cagaacaagaaaaatcaatt 550 |||||||||||||||||||| Sbjct: 6981 cagaacaagaaaaatcaatt 7000
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 aggatttcaatgatcttcca 451 |||||||||||||||||||| Sbjct: 3661952 aggatttcaatgatcttcca 3661971
>ref|NM_065727.2| Caenorhabditis elegans CLocK (biological timing) abnormality family member (clk-1) (clk-1) mRNA, complete cds Length = 729 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 aaaatattttcaaaaaagtt 597 |||||||||||||||||||| Sbjct: 690 aaaatattttcaaaaaagtt 671
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 8958153 accaaaatattttcaaaaaa 8958134
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tcagaacaagaaaaatcaat 549 |||||||||||||||||||| Sbjct: 25489313 tcagaacaagaaaaatcaat 25489294
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 10396236 accaaaatattttcaaaaaa 10396255
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 575 accaaaatattttcaaaaaagtta 598 ||||||||| |||||||||||||| Sbjct: 1205678 accaaaatagtttcaaaaaagtta 1205701
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence Length = 186281 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ttccaaacctctcttctgct 348 |||||||||||||||||||| Sbjct: 43656 ttccaaacctctcttctgct 43637
>gb|AC104981.9| Homo sapiens chromosome 17, clone RP11-316M20, complete sequence Length = 193181 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ggacactgaaatctcttgag 130 |||||||||||||||||||| Sbjct: 83197 ggacactgaaatctcttgag 83178
>gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, complete sequence Length = 179540 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 agaaaaatcaatttaacaaa 557 |||||||||||||||||||| Sbjct: 135343 agaaaaatcaatttaacaaa 135362
>emb|BX005044.9| Zebrafish DNA sequence from clone DKEY-7L6 in linkage group 2, complete sequence Length = 174623 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 ctgcacaaacataaaaaaca 520 |||||||||||||||||||| Sbjct: 43701 ctgcacaaacataaaaaaca 43682
>dbj|AP005801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0045M11 Length = 159148 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 118460 accaaaatattttcaaaaaa 118441
>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0051H02 Length = 136520 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 1749 accaaaatattttcaaaaaa 1730
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 38658 accaaaatattttcaaaaaa 38677
>dbj|BS000245.1| Pan troglodytes chromosome 22 clone:PTB-059I14, map 22, complete sequences Length = 201304 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccaaaatattttcaaaaaag 595 |||||||||||||||||||| Sbjct: 8825 ccaaaatattttcaaaaaag 8844
>dbj|BS000244.1| Pan troglodytes chromosome 22 clone:PTB-070F15, map 22, complete sequences Length = 155086 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccaaaatattttcaaaaaag 595 |||||||||||||||||||| Sbjct: 55464 ccaaaatattttcaaaaaag 55483
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 tcagaacaagaaaaatcaat 549 |||||||||||||||||||| Sbjct: 120629 tcagaacaagaaaaatcaat 120610
>dbj|AP006622.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1276E07, complete sequence Length = 114001 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 agaaaaatcaatttaacaaa 557 |||||||||||||||||||| Sbjct: 30779 agaaaaatcaatttaacaaa 30798
>emb|AJ340779.1|HSA340779 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DJ13C Length = 565 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>emb|AJ339232.1|HSA339232 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AH13C Length = 687 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>emb|AJ339173.1|HSA339173 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GC14C Length = 665 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>emb|AJ341090.1|HSA341090 Homo sapiens genomic sequence surrounding NotI site, clone NR3-BA7C Length = 616 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>emb|AJ340308.1|HSA340308 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QM22C Length = 687 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>emb|AJ326354.1|HSA326354 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GM16C Length = 656 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 221 cctctcttctgctgatgatt 240
>emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in linkage group 12, complete sequence Length = 143674 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 aaaatattttcaaaaaagtt 597 |||||||||||||||||||| Sbjct: 130887 aaaatattttcaaaaaagtt 130868
>emb|CR788243.8| Zebrafish DNA sequence from clone DKEY-194O9 in linkage group 7, complete sequence Length = 113842 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 caaaatattttcaaaaaagt 596 |||||||||||||||||||| Sbjct: 90181 caaaatattttcaaaaaagt 90200
>emb|AL117195.1|CEY57A10A Caenorhabditis elegans YAC Y57A10A, complete sequence Length = 165339 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 accaaaatattttcaaaaaa 594 |||||||||||||||||||| Sbjct: 31625 accaaaatattttcaaaaaa 31644
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 aaacataaaaaacaaggtaa 526 |||||||||||||||||||| Sbjct: 282396 aaacataaaaaacaaggtaa 282377
>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete sequence Length = 147533 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 aaaaaacaaggtaacactca 532 |||||||||||||||||||| Sbjct: 8366 aaaaaacaaggtaacactca 8385
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 attttcaaaaaagttagcac 602 |||||||||||||||||||| Sbjct: 253840 attttcaaaaaagttagcac 253821
>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccaaaatattttcaaaaaag 595 |||||||||||||||||||| Sbjct: 164038 ccaaaatattttcaaaaaag 164057
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 aaaatattttcaaaaaagtt 597 |||||||||||||||||||| Sbjct: 64101 aaaatattttcaaaaaagtt 64120
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atcttcacagatcttgcttt 150 |||||||||||||||||||| Sbjct: 92562 atcttcacagatcttgcttt 92581
>emb|CT476831.7| Mouse DNA sequence from clone RP23-414J18 on chromosome 16, complete sequence Length = 193062 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 caaaatattttcaaaaaagt 596 |||||||||||||||||||| Sbjct: 178344 caaaatattttcaaaaaagt 178363
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 cactcagaacaagaaaaatc 546 |||||||||||||||||||| Sbjct: 1397301 cactcagaacaagaaaaatc 1397282
>gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, complete sequence Length = 218071 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atcttgctttggatcacaga 160 |||||||||||||||||||| Sbjct: 194920 atcttgctttggatcacaga 194939
>gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, complete sequence Length = 211648 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 atcttgctttggatcacaga 160 |||||||||||||||||||| Sbjct: 132312 atcttgctttggatcacaga 132293
>gb|AC170917.2| Mus musculus BAC clone RP23-160F6 from chromosome 1, complete sequence Length = 195784 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 aagaaaaatcaatttaacaa 556 |||||||||||||||||||| Sbjct: 8275 aagaaaaatcaatttaacaa 8294
>gb|AC169084.3| Mus musculus BAC clone RP24-427O13 from chromosome 9, complete sequence Length = 170491 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 aaatattttcaaaaaagtta 598 |||||||||||||||||||| Sbjct: 128871 aaatattttcaaaaaagtta 128852
>emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chromosome X, complete sequence Length = 200875 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 aaaatattttcaaaaaagtt 597 |||||||||||||||||||| Sbjct: 105873 aaaatattttcaaaaaagtt 105854
>emb|AL606755.7| Mouse DNA sequence from clone RP23-112E4 on chromosome 3, complete sequence Length = 201990 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tgatttctgttgtggacaat 370 |||||||||||||||||||| Sbjct: 155376 tgatttctgttgtggacaat 155357
>emb|AL732613.10| Mouse DNA sequence from clone RP23-193A21 on chromosome 4, complete sequence Length = 204012 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 577 caaaatattttcaaaaaagt 596 |||||||||||||||||||| Sbjct: 181745 caaaatattttcaaaaaagt 181764
>emb|AJ342292.1|HSA342292 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NP6R Length = 675 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>emb|AJ343515.1|HSA343515 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FN3C Length = 684 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cctctcttctgctgatgatt 355 |||||||||||||||||||| Sbjct: 227 cctctcttctgctgatgatt 246
>dbj|AP000337.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone:T1957, complete sequence Length = 53553 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccaaaatattttcaaaaaag 595 |||||||||||||||||||| Sbjct: 42309 ccaaaatattttcaaaaaag 42328
>dbj|AP000216.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone f27E1-T1136, segment 2/4, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ccaaaatattttcaaaaaag 595 |||||||||||||||||||| Sbjct: 4579 ccaaaatattttcaaaaaag 4598 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,713,290 Number of Sequences: 3902068 Number of extensions: 7713290 Number of successful extensions: 162810 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 162337 Number of HSP's gapped (non-prelim): 473 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)