>VG50_SHV21 (Q01012) Probable transcription activator EDRF1|
          Length = 535

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +1

Query: 379 PRGTPS**KFSPLNSCLPALYSRTTI---IYNVSCPTETPTMLSSLLCFSTN 525
           PRG P   K     +C PAL+  + I     +V CP   PT+  +  C S+N
Sbjct: 406 PRGRPKGSKTKKRPTCSPALFQSSDIPTDSLHVKCPEMLPTVPQNEFCDSSN 457

>PRKDC_XENLA (Q9DEI1) DNA-dependent protein kinase catalytic subunit (EC|
           2.7.11.1) (DNA-PK catalytic subunit) (DNA-PKcs)
          Length = 4146

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 23/74 (31%), Positives = 36/74 (48%)
 Frame = +1

Query: 415 LNSCLPALYSRTTIIYNVSCPTETPTMLSSLLCFSTNTDLTFLRLRAK*SIPCLRFWYFR 594
           + + +PAL  +T     +SCP      L++L  +STN     L+   K  IP L  +   
Sbjct: 766 IKAYIPAL--QTAFKLGLSCPPLADVGLNALQYWSTNIPSDILKPYYKDIIPLLDGYLTN 823

Query: 595 VYSMSASASTLPIV 636
           + S + S STL +V
Sbjct: 824 LSSTNESLSTLDMV 837


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,571,761
Number of Sequences: 219361
Number of extensions: 1984938
Number of successful extensions: 3527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3526
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)