>DAPB_ANASP (Q8YU19) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)|
          Length = 278

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
 Frame = +3

Query: 15  NLLSTEEDAITRCNMLRNYIYGMI-----------YYFKVQLLEMHKNRICGFALAAGAE 161
           NL    E A T C ++ N+  GM+           Y+  V+++E+H N+          +
Sbjct: 122 NLADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAIQ 181

Query: 162 TEHVFAE 182
           T  + AE
Sbjct: 182 TAELLAE 188

>SCFD1_HUMAN (Q8WVM8) Sec1 family domain-containing protein 1 (Syntaxin-binding|
           protein 1-like 2) (Sly1p)
          Length = 641

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 12  YNLLSTEEDAITRCNMLRNYIYGMIYYFKVQLLEMHK-NRICGFALAAGAETE--HVFAE 182
           Y ++ TEE+    C  LRN +Y   Y   +  +   K   I   ALAA A T+   VF +
Sbjct: 89  YFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQ 148

Query: 183 NVN 191
            +N
Sbjct: 149 YLN 151

>SCFD1_MOUSE (Q8BRF7) Sec1 family domain-containing protein 1 (Syntaxin-binding|
           protein 1-like 2)
          Length = 639

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 12  YNLLSTEEDAITRCNMLRNYIYGMIYYFKVQLLEMHK-NRICGFALAAGAETE--HVFAE 182
           Y ++ TEE+    C  LRN +Y   Y   +  +   K   I   ALAA A T+   VF +
Sbjct: 87  YFVMPTEENIDRLCQDLRNQLYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQ 146

Query: 183 NVN 191
            +N
Sbjct: 147 YLN 149

>Z3H7A_HUMAN (Q8IWR0) Zinc finger CCCH-type domain-containing protein 7A|
          Length = 971

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 226 LSSQLCPRLLVDAVIFVCGQCLYNGLI 306
           L +Q+ P  L   + FVC QCL NG +
Sbjct: 695 LGNQIMPGFLNMKIKFVCAQCLRNGQV 721

>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 193  LLTFSANTCSVSAPAAKAKP 134
            ++ ++ANTCS   PA KAKP
Sbjct: 1286 VMKWNANTCSCECPADKAKP 1305

>FLID_AQUAE (O67805) Flagellar hook-associated protein 2 (HAP2) (Filament cap|
           protein) (Flagellar cap protein)
          Length = 441

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
 Frame = +3

Query: 12  YNLLSTEEDAITRCNMLRNYIYGMIYY----FKVQLLEMHKNR--------ICGFALAAG 155
           Y+L+ T +D + + N  ++Y+   IYY    +K+ L E  +          +   A+   
Sbjct: 147 YSLIDTLKDIVNKINETQDYVKASIYYDGNKYKLMLAETSEENSTVETAPDLSTKAIHLL 206

Query: 156 AETEHVFAENVNRQDTRRSKIR 221
               H F  NV  Q  + ++I+
Sbjct: 207 GTLPHQFGNNVLIQQAKNARIQ 228

>SCFD1_RAT (Q62991) Sec1 family domain-containing protein 1 (Syntaxin-binding|
           protein 1-like 2) (Vesicle transport-related protein
           Ra410) (Sly1p)
          Length = 637

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 12  YNLLSTEEDAITRCNMLRNYIYGMIYYFKVQLLEMHK-NRICGFALAAGAETE--HVFAE 182
           Y ++ TEE+    C  LRN +Y   Y   +  +   K   I   ALAA A T+   VF +
Sbjct: 85  YFVMPTEENIDRLCQDLRNQLYESYYLNFISAISRSKLEDIANAALAANAVTQVAKVFDQ 144

Query: 183 NVN 191
            +N
Sbjct: 145 YLN 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,586,221
Number of Sequences: 219361
Number of extensions: 875911
Number of successful extensions: 2115
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2115
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)