>PSBR_HORVU (Q40070) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVYVGGKTGLFLWAVT
Sbjct: 103 DVYVGGKTGLFLWAVT 118

>PSBR_SOLTU (P06183) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (Light-inducible tissue-specific ST-LS1 protein)
          Length = 138

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVYVGG TGL +WAVT
Sbjct: 103 DVYVGGTTGLAIWAVT 118

>PSBR_LYCES (Q40163) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 138

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVYVGG TGL +WAVT
Sbjct: 103 DVYVGGTTGLAIWAVT 118

>PSBR_TOBAC (Q40519) Photosystem II 10 kDa polypeptide, chloroplast precursor|
           (PII10)
          Length = 136

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVYVGG TGL +WAVT
Sbjct: 101 DVYVGGTTGLAIWAVT 116

>PSBR_SPIOL (P10690) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVY GG TGL +WAVT
Sbjct: 105 DVYAGGTTGLLIWAVT 120

>PSBR_ARATH (P27202) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 140

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVY GG TGL +WAVT
Sbjct: 105 DVYKGGVTGLAIWAVT 120

>PSBR_BRACM (P49108) Photosystem II 10 kDa polypeptide, chloroplast precursor|
          Length = 141

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 165 DVYVGGKTGLFLWAVT 118
           DVY GG TGL +WAVT
Sbjct: 106 DVYKGGVTGLAIWAVT 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,321,995
Number of Sequences: 219361
Number of extensions: 329914
Number of successful extensions: 930
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 80,573,946
effective HSP length: 30
effective length of database: 73,993,116
effective search space used: 1775834784
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)