ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193168.1| Oryza sativa (japonica cultivar-group), predic... 313 4e-82
2dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 4e-82
3dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 4e-82
4gb|AY106077.1| Zea mays PCO149989 mRNA sequence 159 1e-35
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7gb|AY911855.1| Nicotiana tabacum cinnamyl alcohol dehydrogenase ... 54 6e-04
8gb|AC113378.2| Homo sapiens chromosome 5 clone RP11-278A18, comp... 46 0.14
9emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chro... 46 0.14
10emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chr... 46 0.14
11gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, comp... 46 0.14
12gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, comp... 46 0.14
13ref|XM_457552.1| Debaryomyces hansenii CBS767 hypothetical prote... 44 0.57
14gb|AY362455.1| Quercus suber NADPH-dependent cinnamyl alcohol de... 44 0.57
15emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS... 44 0.57
16emb|AM160602.1| Quercus ilex mRNA for cinnamyl alcohol dehydroge... 44 0.57
17emb|AM160601.1| Quercus suber mRNA for cinnamyl alcohol dehydrog... 44 0.57
18gb|BT013872.1| Lycopersicon esculentum clone 132852F, mRNA sequence 42 2.2
19gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23... 42 2.2
20gb|AC164250.4| Mus musculus BAC RP24-327O15 (Roswell Park Cance... 42 2.2
21gb|AC011124.9| Homo sapiens chromosome 8, clone RP11-45K10, comp... 42 2.2
22dbj|AB218718.1| Prunus mume Pm15 mRNA for Cinnamyl alcohol dehyd... 42 2.2
23gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, co... 42 2.2
24gb|AC155279.5| Mus musculus 6 BAC RP24-85A3 (Roswell Park Cancer... 42 2.2
25gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 40 8.8
26gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.8
27gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL ... 40 8.8
28gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.8
29ref|XM_448474.1| Candida glabrata CBS138, CAGL0K05709g partial mRNA 40 8.8
30gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p... 40 8.8
31gb|AC126683.4| Mus musculus BAC clone RP23-62G15 from 6, complet... 40 8.8
32emb|AL683871.15| Human DNA sequence from clone RP13-76L22 on chr... 40 8.8
33emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 8.8
34emb|AJ537555.1|UNK537555 Uncultured bacterium lip1 gene 40 8.8
35gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp... 40 8.8
36dbj|AK138546.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 8.8
37ref|XM_689809.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 8.8
38gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 8.8
39gb|BC085572.1| Danio rerio hypothetical protein LOC553276, mRNA ... 40 8.8
40gb|AC018492.6|AC018492 Homo sapiens chromosome 3 clone RP11-135E... 40 8.8
41gb|AC134775.8| Homo sapiens chromosome 11, clone CTD-2609K8, com... 40 8.8
42emb|X88797.1|EGRNACAD1 E.gunnii mRNA for cinnamyl alcohol dehydr... 40 8.8
43emb|CR769777.13| Zebrafish DNA sequence from clone DKEY-189D19 i... 40 8.8
44gb|AC002082.1|AC002082 Homo sapiens cosmid clone U9B8 from Xp22.... 40 8.8
45emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 i... 40 8.8
46gb|AC002554.1|AC002554 Human Chromosome 11p11.2 PAC clone pDJ404... 40 8.8
47emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in ... 40 8.8
48emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chrom... 40 8.8
49emb|BX000366.6| Zebrafish DNA sequence from clone CH211-204I4, c... 40 8.8 
>ref|NM_193168.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score =  313 bits (158), Expect = 4e-82
 Identities = 416/502 (82%)
 Strand = Plus / Minus

                                                                        
Query: 94   tcagttccatacccaagcttcttatcttgtccttggatacttggtaggttggaaaaagtg 153
            |||||||||  ||||||||| ||||||| ||||| ||||| |||||| |||| |    ||
Sbjct: 1276 tcagttccaggcccaagctttttatcttttcctttgatacctggtagattggcactgatg 1217

                                                                        
Query: 154  gttcatcatctgcacacttatctgggagtggaatgttcggatacatcttgcatatgatct 213
            | |  |||||||||||||| ||||| || ||||| || ||||||||||  |  ||||| |
Sbjct: 1216 gcttgtcatctgcacacttgtctggcagaggaatattgggatacatctcacgaatgattt 1157

                                                                        
Query: 214  tgacaagctccgagtagtgagcaactctttcaacaatgcaatatcttccatttgctgaag 273
             ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1156 ggacgagctctgagtagtgcgcaactctttcaaccatgcaatatcttccatttgctgaag 1097

                                                                        
Query: 274  gaacttcatatgcaaggatatgtgccagggccacatctctgacatttacccagccatggg 333
            ||||||||||||||||||||||||||||||| |||||  | || |||| |||||||  | 
Sbjct: 1096 gaacttcatatgcaaggatatgtgccagggcaacatccttaacgtttatccagccaaagc 1037

                                                                        
Query: 334  cataattagggcatgtaggagatgatccattgattaggtttaagactgcttcaacactag 393
               |||||||  |||| |  ||||||||||||||||| || |  | ||||||| ||||||
Sbjct: 1036 tgaaattaggatatgtcgaggatgatccattgattagcttcagaattgcttcagcactag 977

                                                                        
Query: 394  cgttaagtgtaggctgcagcagaggaccaatgaccattgtggggttcattacaattattt 453
              || |||| |||||||||||| ||||||||||||||||  |||||||    || |||||
Sbjct: 976  tattcagtgaaggctgcagcaggggaccaatgaccattgctgggttcaccgtaactattt 917

                                                                        
Query: 454  cttgttcgttatctttagagaacttccaagcagcctcctctgcaagggtcttagacaagg 513
            |   | | |||||||| || ||||||||||||||||||||||| |||||||| ||||   
Sbjct: 916  caaatccattatcttttgaaaacttccaagcagcctcctctgctagggtcttggacagaa 857

                                                                        
Query: 514  tataccattgctgattctttttacaaagctctggtagtgaaaaccatgtttcatcaacaa 573
             |||||||||||||| ||||| ||||| |||||| | |||||||||||| ||||||||||
Sbjct: 856  cataccattgctgatgcttttcacaaatctctggaactgaaaaccatgtctcatcaacaa 797

                                  
Query: 574  ttacatcaggggttcttggttt 595
             ||||||||| |||||||||||
Sbjct: 796  ctacatcaggagttcttggttt 775
to top
>dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A03, full
            insert sequence
          Length = 1334

 Score =  313 bits (158), Expect = 4e-82
 Identities = 416/502 (82%)
 Strand = Plus / Minus

                                                                        
Query: 94   tcagttccatacccaagcttcttatcttgtccttggatacttggtaggttggaaaaagtg 153
            |||||||||  ||||||||| ||||||| ||||| ||||| |||||| |||| |    ||
Sbjct: 1089 tcagttccaggcccaagctttttatcttttcctttgatacctggtagattggcactgatg 1030

                                                                        
Query: 154  gttcatcatctgcacacttatctgggagtggaatgttcggatacatcttgcatatgatct 213
            | |  |||||||||||||| ||||| || ||||| || ||||||||||  |  ||||| |
Sbjct: 1029 gcttgtcatctgcacacttgtctggcagaggaatattgggatacatctcacgaatgattt 970

                                                                        
Query: 214  tgacaagctccgagtagtgagcaactctttcaacaatgcaatatcttccatttgctgaag 273
             ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 969  ggacgagctctgagtagtgcgcaactctttcaaccatgcaatatcttccatttgctgaag 910

                                                                        
Query: 274  gaacttcatatgcaaggatatgtgccagggccacatctctgacatttacccagccatggg 333
            ||||||||||||||||||||||||||||||| |||||  | || |||| |||||||  | 
Sbjct: 909  gaacttcatatgcaaggatatgtgccagggcaacatccttaacgtttatccagccaaagc 850

                                                                        
Query: 334  cataattagggcatgtaggagatgatccattgattaggtttaagactgcttcaacactag 393
               |||||||  |||| |  ||||||||||||||||| || |  | ||||||| ||||||
Sbjct: 849  tgaaattaggatatgtcgaggatgatccattgattagcttcagaattgcttcagcactag 790

                                                                        
Query: 394  cgttaagtgtaggctgcagcagaggaccaatgaccattgtggggttcattacaattattt 453
              || |||| |||||||||||| ||||||||||||||||  |||||||    || |||||
Sbjct: 789  tattcagtgaaggctgcagcaggggaccaatgaccattgctgggttcaccgtaactattt 730

                                                                        
Query: 454  cttgttcgttatctttagagaacttccaagcagcctcctctgcaagggtcttagacaagg 513
            |   | | |||||||| || ||||||||||||||||||||||| |||||||| ||||   
Sbjct: 729  caaatccattatcttttgaaaacttccaagcagcctcctctgctagggtcttggacagaa 670

                                                                        
Query: 514  tataccattgctgattctttttacaaagctctggtagtgaaaaccatgtttcatcaacaa 573
             |||||||||||||| ||||| ||||| |||||| | |||||||||||| ||||||||||
Sbjct: 669  cataccattgctgatgcttttcacaaatctctggaactgaaaaccatgtctcatcaacaa 610

                                  
Query: 574  ttacatcaggggttcttggttt 595
             ||||||||| |||||||||||
Sbjct: 609  ctacatcaggagttcttggttt 588
to top
>dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F12, full
            insert sequence
          Length = 1322

 Score =  313 bits (158), Expect = 4e-82
 Identities = 416/502 (82%)
 Strand = Plus / Minus

                                                                        
Query: 94   tcagttccatacccaagcttcttatcttgtccttggatacttggtaggttggaaaaagtg 153
            |||||||||  ||||||||| ||||||| ||||| ||||| |||||| |||| |    ||
Sbjct: 1101 tcagttccaggcccaagctttttatcttttcctttgatacctggtagattggcactgatg 1042

                                                                        
Query: 154  gttcatcatctgcacacttatctgggagtggaatgttcggatacatcttgcatatgatct 213
            | |  |||||||||||||| ||||| || ||||| || ||||||||||  |  ||||| |
Sbjct: 1041 gcttgtcatctgcacacttgtctggcagaggaatattgggatacatctcacgaatgattt 982

                                                                        
Query: 214  tgacaagctccgagtagtgagcaactctttcaacaatgcaatatcttccatttgctgaag 273
             ||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 981  ggacgagctctgagtagtgcgcaactctttcaaccatgcaatatcttccatttgctgaag 922

                                                                        
Query: 274  gaacttcatatgcaaggatatgtgccagggccacatctctgacatttacccagccatggg 333
            ||||||||||||||||||||||||||||||| |||||  | || |||| |||||||  | 
Sbjct: 921  gaacttcatatgcaaggatatgtgccagggcaacatccttaacgtttatccagccaaagc 862

                                                                        
Query: 334  cataattagggcatgtaggagatgatccattgattaggtttaagactgcttcaacactag 393
               |||||||  |||| |  ||||||||||||||||| || |  | ||||||| ||||||
Sbjct: 861  tgaaattaggatatgtcgaggatgatccattgattagcttcagaattgcttcagcactag 802

                                                                        
Query: 394  cgttaagtgtaggctgcagcagaggaccaatgaccattgtggggttcattacaattattt 453
              || |||| |||||||||||| ||||||||||||||||  |||||||    || |||||
Sbjct: 801  tattcagtgaaggctgcagcaggggaccaatgaccattgctgggttcaccgtaactattt 742

                                                                        
Query: 454  cttgttcgttatctttagagaacttccaagcagcctcctctgcaagggtcttagacaagg 513
            |   | | |||||||| || ||||||||||||||||||||||| |||||||| ||||   
Sbjct: 741  caaatccattatcttttgaaaacttccaagcagcctcctctgctagggtcttggacagaa 682

                                                                        
Query: 514  tataccattgctgattctttttacaaagctctggtagtgaaaaccatgtttcatcaacaa 573
             |||||||||||||| ||||| ||||| |||||| | |||||||||||| ||||||||||
Sbjct: 681  cataccattgctgatgcttttcacaaatctctggaactgaaaaccatgtctcatcaacaa 622

                                  
Query: 574  ttacatcaggggttcttggttt 595
             ||||||||| |||||||||||
Sbjct: 621  ctacatcaggagttcttggttt 600
to top
>gb|AY106077.1| Zea mays PCO149989 mRNA sequence
          Length = 1282

 Score =  159 bits (80), Expect = 1e-35
 Identities = 386/488 (79%)
 Strand = Plus / Minus

                                                                        
Query: 42   cccttttctttgaagctttctatagtctctttaatgctagtctctagaggaatcagttcc 101
            ||||| ||||| |||||||| || ||||| || | ||| ||||| || |||||||  || 
Sbjct: 1090 cccttctctttcaagctttcgatggtctccttgacgctcgtctccagtggaatcaactcg 1031

                                                                        
Query: 102  atacccaagcttcttatcttgtccttggatacttggtaggttggaaaaagtggttcatca 161
            || || | |||| ||||||| ||||| ||||||||||||| ||| | ||  || |  |||
Sbjct: 1030 atgcctatgctttttatcttctcctttgatacttggtagggtgggacaaacggcttgtca 971

                                                                        
Query: 162  tctgcacacttatctgggagtggaatgttcggatacatcttgcatatgatcttgacaagc 221
            ||||||||||| || || || |||| | | |||||||| ||||  || || || || || 
Sbjct: 970  tctgcacacttgtccggaagaggaagggtaggatacatgttgcggataatgttcaccagt 911

                                                                        
Query: 222  tccgagtagtgagcaactctttcaacaatgcaatatcttccatttgctgaaggaacttca 281
            || ||||||||| |||||||||| || ||||| || |||||||||| ||| ||||| || 
Sbjct: 910  tctgagtagtgaacaactctttccaccatgcagtaccttccatttgatgagggaacctcg 851

                                                                        
Query: 282  tatgcaaggatatgtgccagggccacatctctgacatttacccagccatgggcataatta 341
            |||||||||||||| |||||||| |||||  ||||||| ||||| |||  |  | |||| 
Sbjct: 850  tatgcaaggatatgggccagggcaacatccttgacattaacccatccaaagcaaaaattg 791

                                                                        
Query: 342  gggcatgtaggagatgatccattgattaggtttaagactgcttcaacactagcgttaagt 401
            ||  ||||||  ||||| ||||||||||  || | || ||||||| |||| |  || |||
Sbjct: 790  ggatatgtagacgatgacccattgattaacttcaggattgcttcagcactggtatttagt 731

                                                                        
Query: 402  gtaggctgcagcagaggaccaatgaccattgtggggttcattacaattatttcttgttcg 461
            |||||||||||||| |||||||| ||||| |  ||||| ||   ||  |||||  || | 
Sbjct: 730  gtaggctgcagcaggggaccaataaccatcgctgggtttatagtaacgatttcaagtcca 671

                                                                        
Query: 462  ttatctttagagaacttccaagcagcctcctctgcaagggtcttagacaaggtataccat 521
            |||||  | |||||||||||||||||||||||||| || ||||| |||||  ||||||||
Sbjct: 670  ttatcccttgagaacttccaagcagcctcctctgccagcgtcttggacaaaatataccat 611

                    
Query: 522  tgctgatt 529
            ||||||||
Sbjct: 610  tgctgatt 603
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                            
Query: 169      acttatctgggagtggaatgttcggatacatcttgcatatgatcttgacaagctccgagt 228
                |||| ||||| || ||||| || ||||||||||  |  ||||| | ||| ||||| ||||
Sbjct: 19009717 acttgtctggcagaggaatattgggatacatctcacgaatgatttggacgagctctgagt 19009658

                                                                            
Query: 229      agtgagcaactctttcaacaatgcaatatcttccatttgctgaaggaacttcatatgcaa 288
                |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 19009657 agtgcgcaactctttcaaccatgcaatatcttccatttgctgaaggaacttcatatgcaa 19009598

                                      
Query: 289      ggatatgtgccagggccacatc 310
                |||||||||||||||| |||||
Sbjct: 19009597 ggatatgtgccagggcaacatc 19009576



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 122/148 (82%)
 Strand = Plus / Minus

                                                                            
Query: 380      tgcttcaacactagcgttaagtgtaggctgcagcagaggaccaatgaccattgtggggtt 439
                ||||||| ||||||  || |||| |||||||||||| ||||||||||||||||  |||||
Sbjct: 19008746 tgcttcagcactagtattcagtgaaggctgcagcaggggaccaatgaccattgctgggtt 19008687

                                                                            
Query: 440      cattacaattatttcttgttcgttatctttagagaacttccaagcagcctcctctgcaag 499
                ||    || ||||||   | | |||||||| || ||||||||||||||||||||||| ||
Sbjct: 19008686 caccgtaactatttcaaatccattatcttttgaaaacttccaagcagcctcctctgctag 19008627

                                            
Query: 500      ggtcttagacaaggtataccattgctga 527
                |||||| ||||    |||||||||||||
Sbjct: 19008626 ggtcttggacagaacataccattgctga 19008599



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                            
Query: 524      ctgattctttttacaaagctctggtagtgaaaaccatgtttcatcaacaattacatcagg 583
                ||||| ||||| ||||| |||||| | |||||||||||| |||||||||| |||||||||
Sbjct: 19007596 ctgatgcttttcacaaatctctggaactgaaaaccatgtctcatcaacaactacatcagg 19007537

                            
Query: 584      ggttcttggttt 595
                 |||||||||||
Sbjct: 19007536 agttcttggttt 19007525
to top
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1129H01
          Length = 101104

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                         
Query: 169   acttatctgggagtggaatgttcggatacatcttgcatatgatcttgacaagctccgagt 228
             |||| ||||| || ||||| || ||||||||||  |  ||||| | ||| ||||| ||||
Sbjct: 66760 acttgtctggcagaggaatattgggatacatctcacgaatgatttggacgagctctgagt 66701

                                                                         
Query: 229   agtgagcaactctttcaacaatgcaatatcttccatttgctgaaggaacttcatatgcaa 288
             |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 66700 agtgcgcaactctttcaaccatgcaatatcttccatttgctgaaggaacttcatatgcaa 66641

                                   
Query: 289   ggatatgtgccagggccacatc 310
             |||||||||||||||| |||||
Sbjct: 66640 ggatatgtgccagggcaacatc 66619



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 122/148 (82%)
 Strand = Plus / Minus

                                                                         
Query: 380   tgcttcaacactagcgttaagtgtaggctgcagcagaggaccaatgaccattgtggggtt 439
             ||||||| ||||||  || |||| |||||||||||| ||||||||||||||||  |||||
Sbjct: 65789 tgcttcagcactagtattcagtgaaggctgcagcaggggaccaatgaccattgctgggtt 65730

                                                                         
Query: 440   cattacaattatttcttgttcgttatctttagagaacttccaagcagcctcctctgcaag 499
             ||    || ||||||   | | |||||||| || ||||||||||||||||||||||| ||
Sbjct: 65729 caccgtaactatttcaaatccattatcttttgaaaacttccaagcagcctcctctgctag 65670

                                         
Query: 500   ggtcttagacaaggtataccattgctga 527
             |||||| ||||    |||||||||||||
Sbjct: 65669 ggtcttggacagaacataccattgctga 65642



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Minus

                                                                         
Query: 524   ctgattctttttacaaagctctggtagtgaaaaccatgtttcatcaacaattacatcagg 583
             ||||| ||||| ||||| |||||| | |||||||||||| |||||||||| |||||||||
Sbjct: 64639 ctgatgcttttcacaaatctctggaactgaaaaccatgtctcatcaacaactacatcagg 64580

                         
Query: 584   ggttcttggttt 595
              |||||||||||
Sbjct: 64579 agttcttggttt 64568
to top
>gb|AY911855.1| Nicotiana tabacum cinnamyl alcohol dehydrogenase 1 (CAD1-7) mRNA,
           complete cds
          Length = 984

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 225 gagtagtgagcaactctttcaacaatgcaatatcttccatttgctgaagga 275
           |||||||| |||||||| ||||| ||  ||||||||||||| |||||||||
Sbjct: 773 gagtagtgggcaactctctcaaccattaaatatcttccattagctgaagga 723
to top
>gb|AC113378.2| Homo sapiens chromosome 5 clone RP11-278A18, complete sequence
          Length = 93225

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 35   aacaaaacccttttctttgaagc 57
            |||||||||||||||||||||||
Sbjct: 3872 aacaaaacccttttctttgaagc 3850
to top
>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
             sequence
          Length = 158069

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 480   caagcagcctcctctgcaagggt 502
             |||||||||||||||||||||||
Sbjct: 52849 caagcagcctcctctgcaagggt 52871
to top
>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
             sequence
          Length = 152296

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 480   caagcagcctcctctgcaagggt 502
             |||||||||||||||||||||||
Sbjct: 48035 caagcagcctcctctgcaagggt 48013
to top
>gb|AC010345.6| Homo sapiens chromosome 5 clone CTD-2017K17, complete sequence
          Length = 102001

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 35    aacaaaacccttttctttgaagc 57
             |||||||||||||||||||||||
Sbjct: 83963 aacaaaacccttttctttgaagc 83941
to top
>gb|AC092353.2| Homo sapiens chromosome 5 clone RP11-305P14, complete sequence
          Length = 208660

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 35     aacaaaacccttttctttgaagc 57
              |||||||||||||||||||||||
Sbjct: 201075 aacaaaacccttttctttgaagc 201053
to top
>ref|XM_457552.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B14036g)
           partial mRNA
          Length = 1548

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 243 tcaacaatgcaatatcttccat 264
           ||||||||||||||||||||||
Sbjct: 202 tcaacaatgcaatatcttccat 181
to top
>gb|AY362455.1| Quercus suber NADPH-dependent cinnamyl alcohol dehydrogenase (CAD1)
           mRNA, complete cds
          Length = 1378

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 252 caatatcttccatttgctgaaggaacttcatatgcaaggatatgtgccagggccacatct 311
           |||||||||||| | |||| ||||| |||||||||  | ||||||||   ||| ||||||
Sbjct: 809 caatatcttccactagctgtaggaatttcatatgcttgaatatgtgcattggcaacatct 750

                         
Query: 312 ctgacatttaccca 325
            ||||||| |||||
Sbjct: 749 ttgacattaaccca 736
to top
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
               hansenii
          Length = 1349926

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 243     tcaacaatgcaatatcttccat 264
               ||||||||||||||||||||||
Sbjct: 1087704 tcaacaatgcaatatcttccat 1087683
to top
>emb|AM160602.1| Quercus ilex mRNA for cinnamyl alcohol dehydrogenase (cad gene)
          Length = 1225

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 252 caatatcttccatttgctgaaggaacttcatatgcaaggatatgtgccagggccacatct 311
           |||||||||||| | |||| ||||| |||||||||  | ||||||||   ||| ||||||
Sbjct: 781 caatatcttccactagctgtaggaatttcatatgcttgaatatgtgcattggcaacatct 722

                         
Query: 312 ctgacatttaccca 325
            ||||||| |||||
Sbjct: 721 ttgacattaaccca 708
to top
>emb|AM160601.1| Quercus suber mRNA for cinnamyl alcohol dehydrogenase (cad gene)
          Length = 1378

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 252 caatatcttccatttgctgaaggaacttcatatgcaaggatatgtgccagggccacatct 311
           |||||||||||| | |||| ||||| |||||||||  | ||||||||   ||| ||||||
Sbjct: 809 caatatcttccactagctgtaggaatttcatatgcttgaatatgtgcattggcaacatct 750

                         
Query: 312 ctgacatttaccca 325
            ||||||| |||||
Sbjct: 749 ttgacattaaccca 736
to top
>gb|BT013872.1| Lycopersicon esculentum clone 132852F, mRNA sequence
          Length = 1147

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 556 accatgtttcatcaacaattacatcaggggttcttgg 592
           |||||||||||||||| |  || ||||||||||||||
Sbjct: 476 accatgtttcatcaaccaccacttcaggggttcttgg 440
to top
>gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence
          Length = 310003

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 50     tttgaagctttctatagtctcttta 74
              |||||||||||| ||||||||||||
Sbjct: 183799 tttgaagctttcaatagtctcttta 183823
to top
>gb|AC164250.4| Mus musculus  BAC RP24-327O15 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 221612

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   gcaaggatatgtgccagggcc 305
             |||||||||||||||||||||
Sbjct: 89270 gcaaggatatgtgccagggcc 89290
to top
>gb|AC011124.9| Homo sapiens chromosome 8, clone RP11-45K10, complete sequence
          Length = 185237

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     cttttctttgaagctttctat 64
              |||||||||||||||||||||
Sbjct: 150457 cttttctttgaagctttctat 150477
to top
>dbj|AB218718.1| Prunus mume Pm15 mRNA for Cinnamyl alcohol dehydrogenase, complete
           cds
          Length = 1321

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 396 ttaagtgtaggctgcagcagaggaccaatgaccattg 432
           |||||||| ||||| | |||||||||||| |||||||
Sbjct: 654 ttaagtgttggctgtaacagaggaccaatcaccattg 618
to top
>gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, complete sequence
          Length = 182712

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 44   cttttctttgaagctttctat 64
            |||||||||||||||||||||
Sbjct: 9442 cttttctttgaagctttctat 9462
to top
>gb|AC155279.5| Mus musculus 6 BAC RP24-85A3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 201663

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    gcaaggatatgtgccagggcc 305
              |||||||||||||||||||||
Sbjct: 172925 gcaaggatatgtgccagggcc 172945
to top
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 63     atagtctctttaatgctagtctct 86
              ||||||||||||||| ||||||||
Sbjct: 234920 atagtctctttaatgatagtctct 234943
to top
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    gaccaatgaccattgtgggg 437
              ||||||||||||||||||||
Sbjct: 690708 gaccaatgaccattgtgggg 690727
to top
>gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete
             sequence
          Length = 107190

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     tttctatatttgccaaatat 20
             ||||||||||||||||||||
Sbjct: 97776 tttctatatttgccaaatat 97757
to top
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 437     gttcattacaattatttctt 456
               ||||||||||||||||||||
Sbjct: 1532355 gttcattacaattatttctt 1532336
to top
>ref|XM_448474.1| Candida glabrata CBS138, CAGL0K05709g partial mRNA
          Length = 3312

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 438 ttcattacaattatttcttgttcg 461
           ||||||| ||||||||||||||||
Sbjct: 251 ttcattataattatttcttgttcg 228
to top
>gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p, complete sequence
          Length = 162042

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   ggttcattacaattatttct 455
             ||||||||||||||||||||
Sbjct: 13543 ggttcattacaattatttct 13524
to top
>gb|AC126683.4| Mus musculus BAC clone RP23-62G15 from 6, complete sequence
          Length = 167297

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    aacaaaacccttttctttgaagct 58
             |||||||||||||||||| |||||
Sbjct: 34524 aacaaaacccttttcttttaagct 34501
to top
>emb|AL683871.15| Human DNA sequence from clone RP13-76L22 on chromosome X, complete
             sequence
          Length = 175765

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   atctttagagaacttccaag 483
             ||||||||||||||||||||
Sbjct: 96019 atctttagagaacttccaag 96000
to top
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 438    ttcattacaattatttcttgttcg 461
              ||||||| ||||||||||||||||
Sbjct: 558964 ttcattataattatttcttgttcg 558987
to top
>emb|AJ537555.1|UNK537555 Uncultured bacterium lip1 gene
          Length = 2285

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 555  aaccatgtttcatcaacaat 574
            ||||||||||||||||||||
Sbjct: 2149 aaccatgtttcatcaacaat 2130
to top
>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence
          Length = 192282

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      tttctatatttgccaaatat 20
              ||||||||||||||||||||
Sbjct: 158143 tttctatatttgccaaatat 158124
to top
>dbj|AK138546.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330054L18 product:unclassifiable, full
            insert sequence
          Length = 5426

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 35   aacaaaacccttttctttgaagct 58
            |||||||||||||||||| |||||
Sbjct: 5161 aacaaaacccttttcttttaagct 5184
to top
>ref|XM_689809.1| PREDICTED: Danio rerio hypothetical protein LOC553276 (LOC553276),
            partial mRNA
          Length = 9785

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 267  gctgaaggaacttcatatgcaagg 290
            |||||||||||||||||| |||||
Sbjct: 9596 gctgaaggaacttcatattcaagg 9619
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    tgcaaggatatgtgccaggg 303
              ||||||||||||||||||||
Sbjct: 984683 tgcaaggatatgtgccaggg 984664
to top
>gb|BC085572.1| Danio rerio hypothetical protein LOC553276, mRNA (cDNA clone
           IMAGE:7255723), partial cds
          Length = 918

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 267 gctgaaggaacttcatatgcaagg 290
           |||||||||||||||||| |||||
Sbjct: 672 gctgaaggaacttcatattcaagg 695
to top
>gb|AC018492.6|AC018492 Homo sapiens chromosome 3 clone RP11-135E16 map 3p, complete sequence
          Length = 169084

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   ggttcattacaattatttct 455
             ||||||||||||||||||||
Sbjct: 96793 ggttcattacaattatttct 96774
to top
>gb|AC134775.8| Homo sapiens chromosome 11, clone CTD-2609K8, complete sequence
          Length = 172231

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    aatgcaacaaaacccttttctttg 53
             |||| |||||||||||||||||||
Sbjct: 85031 aatgaaacaaaacccttttctttg 85008
to top
>emb|X88797.1|EGRNACAD1 E.gunnii mRNA for cinnamyl alcohol dehydrogenase
          Length = 1225

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 395 gttaagtgtaggctgcagcagaggaccaatgaccat 430
           ||||||||| |||||||  ||||||||||| |||||
Sbjct: 687 gttaagtgttggctgcaaaagaggaccaatcaccat 652
to top
>emb|CR769777.13| Zebrafish DNA sequence from clone DKEY-189D19 in linkage group 18,
              complete sequence
          Length = 124874

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    gggttcattacaattatttc 454
              ||||||||||||||||||||
Sbjct: 111695 gggttcattacaattatttc 111714
to top
>gb|AC002082.1|AC002082 Homo sapiens cosmid clone U9B8 from Xp22.1-22.2, complete sequence
          Length = 39238

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  atctttagagaacttccaag 483
            ||||||||||||||||||||
Sbjct: 8492 atctttagagaacttccaag 8511
to top
>emb|AL935160.11| Zebrafish DNA sequence from clone CH211-184C7 in linkage group 12,
              complete sequence
          Length = 140401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    gctgattctttttacaaagc 542
              ||||||||||||||||||||
Sbjct: 115098 gctgattctttttacaaagc 115079
to top
>gb|AC002554.1|AC002554 Human Chromosome 11p11.2 PAC clone pDJ404m15, complete sequence
          Length = 127590

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    aatgcaacaaaacccttttctttg 53
             |||| |||||||||||||||||||
Sbjct: 80492 aatgaaacaaaacccttttctttg 80515
to top
>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12, complete
              sequence
          Length = 262809

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    gctgattctttttacaaagc 542
              ||||||||||||||||||||
Sbjct: 120248 gctgattctttttacaaagc 120267
to top
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete
              sequence
          Length = 246587

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    tgaaaaccatgtttcatcaa 570
              ||||||||||||||||||||
Sbjct: 221170 tgaaaaccatgtttcatcaa 221151
to top
>emb|BX000366.6| Zebrafish DNA sequence from clone CH211-204I4, complete sequence
          Length = 169542

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 267   gctgaaggaacttcatatgcaagg 290
             |||||||||||||||||| |||||
Sbjct: 30538 gctgaaggaacttcatattcaagg 30515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,102,204
Number of Sequences: 3902068
Number of extensions: 6102204
Number of successful extensions: 116962
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116725
Number of HSP's gapped (non-prelim): 232
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top