ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11d02 |
|---|---|
| Clone Library Name | barley_pub |
>EXT1_DROME (Q9V730) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein| tout-velu) Length = 760 Score = 60.1 bits (144), Expect = 6e-09 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 3/104 (2%) Frame = -1 Query: 617 WENFKNNPLFDISTDHPATYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 441 W ++N + + ++ YE + Q + FCL P G S R +EA+ GCIPV++++ Sbjct: 301 WRELQDNRCDEDNREYDRYDYETLLQNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNA 360 Query: 440 IVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDI--LRKQ 315 VLPF I W + I+ +E+ + ++ I+ S+P E I LR+Q Sbjct: 361 WVLPFESKIDWKQAAIWADERLLLQVPDIVRSIPAERIFALRQQ 404
>EXT1_CAEEL (O01704) Multiple exostoses homolog 1 (Related to mammalian RIB| protein 1) Length = 378 Score = 56.2 bits (134), Expect = 8e-08 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -1 Query: 560 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEE 381 Y E + + FCL P G S R +E + GC+PV+I+D +LPF++ I W I V E Sbjct: 258 YDELLANSTFCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAE 317 Query: 380 KDVPKLDTILTS 345 +D + +L S Sbjct: 318 RDALSIPELLMS 329
>EXT2_BOVIN (O77783) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (HS-polymerase) (HS-POL) (Multiple exostoses protein 2 homolog) Length = 718 Score = 55.5 bits (132), Expect = 1e-07 Identities = 29/83 (34%), Positives = 44/83 (53%) Frame = -1 Query: 560 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEE 381 Y + +Q A FC+ G L + + GC+PVIIAD VLPF++ + W + V E Sbjct: 308 YPQVLQEATFCMVLRGARLGQAVLSDVLRAGCVPVIIADSYVLPFSEVLDWKRASVVVPE 367 Query: 380 KDVPKLDTILTSMPIEDILRKQR 312 + + + +IL S+P I QR Sbjct: 368 EKMSDVYSILQSIPRRQIEEMQR 390
>EXT2_HUMAN (Q93063) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT2) (Multiple exostoses protein Length = 718 Score = 54.7 bits (130), Expect = 2e-07 Identities = 27/83 (32%), Positives = 44/83 (53%) Frame = -1 Query: 560 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEE 381 Y + +Q A FC+ G L + + GC+PV+IAD +LPF++ + W + V E Sbjct: 308 YPQVLQEATFCVVLRGARLGQAVLSDVLQAGCVPVVIADSYILPFSEVLDWKRASVVVPE 367 Query: 380 KDVPKLDTILTSMPIEDILRKQR 312 + + + +IL S+P I QR Sbjct: 368 EKMSDVYSILQSIPQRQIEEMQR 390
>EXT1_MOUSE (P97464) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = -1 Query: 617 WENFKNNPLFDISTDHPATYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 441 W+ K++ +T++ Y +M A FCL P G S R +EA+ C+PV++++ Sbjct: 304 WQKHKDSRCDRDNTEYEKYDYREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNG 363 Query: 440 IVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDIL 324 LPF++ I W + + +E+ + ++ + + S+ + IL Sbjct: 364 WELPFSEVINWNQAAVIGDERLLLQIPSTIRSIHQDKIL 402
>EXT1_HUMAN (Q16394) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT1) (Multiple exostoses protein Length = 746 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = -1 Query: 617 WENFKNNPLFDISTDHPATYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 441 W+ K++ +T++ Y +M A FCL P G S R +EA+ C+PV++++ Sbjct: 304 WQKHKDSRCDRDNTEYEKYDYREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNG 363 Query: 440 IVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDIL 324 LPF++ I W + + +E+ + ++ + + S+ + IL Sbjct: 364 WELPFSEVINWNQAAVIGDERLLLQIPSTIRSIHQDKIL 402
>EXT1_CRIGR (Q9JK82) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Heparan sulfate| copolymerase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Frame = -1 Query: 617 WENFKNNPLFDISTDHPATYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 441 W+ K++ +T++ Y +M A FCL P G S R +EA+ C+PV++++ Sbjct: 304 WQKHKDSRCDRDNTEYEKYDYREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNG 363 Query: 440 IVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDIL 324 LPF++ I W + + +E+ + ++ + + S+ + IL Sbjct: 364 WELPFSEVINWNQAAVIGDERLLLQIPSTIRSIHQDKIL 402
>EXT2_MOUSE (P70428) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 2 homolog) Length = 718 Score = 50.1 bits (118), Expect = 6e-06 Identities = 25/83 (30%), Positives = 43/83 (51%) Frame = -1 Query: 560 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEE 381 Y + +Q A FC L + + GC+PV+IAD +LPF++ + W + + V E Sbjct: 308 YPQVLQEATFCTVLRRARLGQAVLSDVLQAGCVPVVIADSYILPFSEVLDWKKASVVVPE 367 Query: 380 KDVPKLDTILTSMPIEDILRKQR 312 + + + +IL ++P I QR Sbjct: 368 EKMSDVYSILQNIPQRQIEEMQR 390
>EXT1C_BRARE (Q5IGR6) Exostosin-1c (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1c) (Multiple exostoses protein 1 homolog c) Length = 737 Score = 47.4 bits (111), Expect = 4e-05 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%) Frame = -1 Query: 617 WENFKNNPLFDISTDHPATYYED------MQRAVFCLCPLGWAPWSPRLVEAVVFGCIPV 456 WE K D DH YE + + FCL P G S R +E++ CIPV Sbjct: 296 WEKHK-----DARCDHDNQEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPV 350 Query: 455 IIADDIVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDIL 324 ++++ LPF+D I W + + +E+ + ++ + + ++ I+ +L Sbjct: 351 LLSNGWELPFSDVIQWNQAVVEGDERLLLQVPSTVRAVGIDRVL 394
>EXT1B_BRARE (Q5IGR7) Exostosin-1b (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1b) (Multiple exostoses protein 1 homolog b) Length = 741 Score = 46.6 bits (109), Expect = 6e-05 Identities = 23/79 (29%), Positives = 44/79 (55%) Frame = -1 Query: 560 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEE 381 Y E + + FCL P G S R +EA+ C+PV++++ LPF++ I W + +E Sbjct: 319 YREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVIDWNTAAVIGDE 378 Query: 380 KDVPKLDTILTSMPIEDIL 324 + + ++ + + S+ + IL Sbjct: 379 RLLLQIPSTVRSIHQDKIL 397
>EXT1A_BRARE (Q5IGR8) Exostosin-1a (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1a) (Multiple exostoses protein 1 homolog a) Length = 730 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/79 (29%), Positives = 44/79 (55%) Frame = -1 Query: 560 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEE 381 Y E + + FCL P G S R +EA+ C+PV++++ LPF++ I W + +E Sbjct: 308 YKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEIIDWRTAAVIGDE 367 Query: 380 KDVPKLDTILTSMPIEDIL 324 + + ++ + + S+ + IL Sbjct: 368 RLLLQIPSTVRSIHQDRIL 386
>EXT2_DROME (Q9Y169) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Protein sister| of tout-velu) Length = 717 Score = 45.4 bits (106), Expect = 1e-04 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Frame = -1 Query: 584 ISTDHPATYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPW 408 +S H + Y + R FCL P LVE + CIPVI D+ VLPF D I W Sbjct: 299 LSQHHKSLEYPRLLSRGKFCLLGRSLRMGQPDLVEIMSQHCIPVIAVDNYVLPFEDVIDW 358 Query: 407 XEIGIFVEEKDVPKLDTILTSMPIEDILRKQR 312 + + E ++ + L ++ I+ Q+ Sbjct: 359 SLASVRIRENELHSVMQKLKAISSVKIVEMQK 390
>EXTL3_HUMAN (O43909) Exostosin-like 3 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXTL3) (Multiple exostosis-like protein 3) (Hereditary multiple exostoses gene isolog) (E Length = 919 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -1 Query: 494 RLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDILRKQ 315 RL EA+ G +PV++ + + LP+ D + W E + V + V ++ +L S+ D+L + Sbjct: 450 RLFEALEVGAVPVVLGEQVQLPYQDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMR 509 Query: 314 R 312 R Sbjct: 510 R 510
>EXTL3_MOUSE (Q9WVL6) Exostosin-like 3 (EC 2.4.1.-) (Multiple exostosis-like| protein 3) Length = 918 Score = 43.9 bits (102), Expect = 4e-04 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -1 Query: 494 RLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDILRKQ 315 RL EA+ G +PV++ + + LP+ D + W E + V + V ++ +L S+ D+L + Sbjct: 449 RLFEALEVGAVPVVLGEQVQLPYHDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMR 508 Query: 314 R 312 R Sbjct: 509 R 509
>EXTL1_MOUSE (Q9JKV7) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 669 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -1 Query: 554 EDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEEK 378 E + A FCL P G + ++A+ GCIPV+++ LPF++ I W + I +E+ Sbjct: 259 ETLPNATFCLIP-GHRSATSCFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIIADER 316
>EXTL1_HUMAN (Q92935) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 676 Score = 40.8 bits (94), Expect = 0.004 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -1 Query: 554 EDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEEK 378 E + A FCL + R ++A+ GCIPV+++ LPF++ I W + I +E+ Sbjct: 265 ETLPNATFCLISGHRPEAASRFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIVADER 323
>EXT2_CAEEL (O01705) Exostosin-2 (EC 2.4.1.223) (EC 2.4.1.224)| (Glucuronyl-galactosyl-proteoglycan/Glucuronosyl-N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses homolog 2) Length = 814 Score = 39.7 bits (91), Expect = 0.008 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = -1 Query: 488 VEAVVFGCIPVIIADDIVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDILRKQRL 309 + ++ GCIP+I+++ +LPF D I W + +P+ I+ S I DI+ +R+ Sbjct: 351 LSSLQLGCIPIILSNSQLLPFQDLIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRRV 410
>EXT3_DROME (Q9XZ08) Exostosin-3 (EC 2.4.1.223) (Protein brother of tout-velu)| Length = 972 Score = 38.1 bits (87), Expect = 0.023 Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Frame = -1 Query: 494 RLVEAVVFGCIPVII-ADDIVLPFADAIPWXEIGIFVEEKDVPKLDTILTSMPIEDILRK 318 R+ EA+ G +PVI+ AD++ LP+A+ + W + + + + +L +L ++ D+L Sbjct: 500 RIYEALRSGAVPVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLLL 559 Query: 317 QR 312 +R Sbjct: 560 RR 561
>Y4BF_RHISN (P55373) Putative transposase y4bF| Length = 457 Score = 34.7 bits (78), Expect = 0.25 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +3 Query: 75 ELFLCGLCGKDDGNSFLPRF 134 +L L G+CG DDGN+FLPRF Sbjct: 265 DLRLEGICGMDDGNAFLPRF 284
>DHX9_CAEEL (Q22307) Probable ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear| DNA helicase II) (NDH II) Length = 1301 Score = 34.7 bits (78), Expect = 0.25 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = -1 Query: 401 IGIFVEEKDVPKLDTILTSMPIEDILRKQRLLANP--------SMKQAMLFPQPAQPRDA 246 +G ++ L +L MPIE ++ K +L + AM FP P PR+ Sbjct: 848 MGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFVPREK 907 Query: 245 FHQILNGLARK 213 H L+G RK Sbjct: 908 HHSRLSGTQRK 918
>MAML2_HUMAN (Q8IZL2) Mastermind-like protein 2 (Mam-2)| Length = 1153 Score = 32.7 bits (73), Expect = 0.96 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +1 Query: 397 PISXHGIASANGSTISSAMMTGMQPKTTASTNLGLHGAQP 516 P+S H I + N S +S++ T M +TA N+G++G P Sbjct: 832 PVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 871
>OR94B_DROME (Q9VCS8) Putative odorant receptor 94b| Length = 383 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -1 Query: 647 YYARGARASLWENFKNNPLFDISTDHPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFG 468 +Y R ASL +++P F++ +++ QR + W W V V G Sbjct: 91 WYRRHEAASLIHELQHDPAFNLRNSEEIKFWQQNQRNFKRI--FYWYIWGSLFV--AVMG 146 Query: 467 CIPVIIADDIVLPFADAIPW 408 I V +D LPF +P+ Sbjct: 147 YISVFFQEDYELPFGYYVPF 166
>VM01_VACCC (P20640) Ankyrin repeat protein M1| Length = 472 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +1 Query: 265 GCGNNMACFIDGFASNLCFLRISSMGIDVRIVSNFGTSFSSTKIPISXHGIA-SANGSTI 441 GCG +AC S F +I S+G + RIV FG K I H ++ + STI Sbjct: 167 GCGPLLACTDP---SERVFKKIMSIGFEARIVDKFG------KNHIHRHLMSDNPKASTI 217 Query: 442 SSAMMTGMQP-KTTASTNLGLH 504 S M G+ P K N LH Sbjct: 218 SWMMKLGISPSKPDHDGNTPLH 239
>VM01_VACCV (P14356) Ankyrin repeat protein M1| Length = 421 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +1 Query: 265 GCGNNMACFIDGFASNLCFLRISSMGIDVRIVSNFGTSFSSTKIPISXHGIA-SANGSTI 441 GCG +AC S F +I S+G + RIV FG K I H ++ + STI Sbjct: 116 GCGPLLACTDP---SERVFKKIMSIGFEARIVDKFG------KNHIHRHLMSDNPKASTI 166 Query: 442 SSAMMTGMQP-KTTASTNLGLH 504 S M G+ P K N LH Sbjct: 167 SWMMKLGISPSKPDHDGNTPLH 188
>ADPN_HUMAN (Q9NST1) Adiponutrin (iPLA2-epsilon) (Calcium-independent| phospholipase A2-epsilon) (Patatin-like phospholipase domain-containing protein 3) [Includes: Triacylglycerol lipase (EC 3.1.1.3); Acylglycerol O-acyltransferase (EC 2.3.1.-)] Length = 481 Score = 30.8 bits (68), Expect = 3.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 276 VPTASPTARCIPPDLEWPCS*APTPRGCILATRWEAS 166 +P +S A P+ +WPC +P+GC T+ EA+ Sbjct: 409 MPVSSQQASPCTPEQDWPCWTPCSPKGCPAETKAEAT 445
>VDAC3_RAT (Q9R1Z0) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +3 Query: 441 IISYDDWNAAKDNSLNQPRAPWCPAQWA*---AEDCTLHVFVVSGRVIGGNVKQRI 599 +++++ W A S + ++ C +A AED LH V G GG++ QR+ Sbjct: 143 VLAFEGWLAGYQMSFDTAKSKLCQNNFALGYKAEDFQLHTHVNDGTEFGGSIYQRV 198
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 84 LCGLCGKDDGNSFLPRFQISNRSSSPVQMLPTGWQ 188 LCGLCG DGNS ++ + + L WQ Sbjct: 1287 LCGLCGNYDGNSDNDHLKLDGSPAGDKEELGNSWQ 1321
>TBG1_RAT (P83888) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.4 bits (67), Expect = 4.8 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 260 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 150 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG 107
>TBG1_MOUSE (P83887) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.4 bits (67), Expect = 4.8 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 260 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 150 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG 107
>HEM1_DESVH (Q72C23) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 440 Score = 30.4 bits (67), Expect = 4.8 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Frame = -1 Query: 389 VEEKDVPKLDTILTSMPIE----DILRKQRLLANPSMKQAM--LFPQPAQPRDAFHQILN 228 + E++ K L S+ ++ D++R+ +A + + + L P + RDA +L+ Sbjct: 324 IVEEETGKFGQWLRSLELQPTIVDLIRRSERIAQDELARTLKRLGPVDDETRDALEAMLS 383 Query: 227 GLARKLPHPEGVYLPPGGKHLNWTAGP 147 + RKL H +L +H AGP Sbjct: 384 SMVRKLNHEPITFLK--RRHSEEDAGP 408
>TBG2_HUMAN (Q9NRH3) Tubulin gamma-2 chain (Gamma-2 tubulin)| Length = 451 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 260 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 150 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG 107
>TBG1_HUMAN (P23258) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 260 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 150 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG 107
>TBG1_CANFA (Q9GKK5) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -1 Query: 260 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 150 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG 107
>NU4M_TETNG (Q4JQH8) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 460 Score = 30.0 bits (66), Expect = 6.2 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 162 VQMLPTGWQVYTLWVWELTSKAIQDLVECISRLGWL 269 V ++PT W T W+W T + L+ ++ L WL Sbjct: 9 VMLIPTAWLAPTKWLWPTT--LLHSLLIALASLSWL 42
>ECA3_ARATH (Q9SY55) Calcium-transporting ATPase 3, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 998 Score = 29.6 bits (65), Expect = 8.1 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 572 HPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIV 435 H Y +F + PL WA W+ AV++ PVII D+++ Sbjct: 930 HVLILYVHPLAVLFSVTPLSWAEWT-----AVLYLSFPVIIIDELL 970
>DYHC_FUSSO (P78716) Dynein heavy chain, cytosolic (DYHC)| Length = 4349 Score = 29.6 bits (65), Expect = 8.1 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -1 Query: 251 DAFHQI-LNGLARKLPHPEGVYLPPGGKHLNW--TAGPVGDL 135 D FHQ+ L+G+ K P+P YL + L W A PV DL Sbjct: 3541 DWFHQLHLSGIQYKSPNPVTEYLSTADERLGWQENALPVDDL 3582 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,237,392 Number of Sequences: 219361 Number of extensions: 2483166 Number of successful extensions: 7259 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 6839 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7259 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
