Clone Information

BLAST Search Result

Clone Name	rbaal11c24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS7_SECCE (Q9XET4) 40S ribosomal protein S7	179	1e-45
2	RS7_HORVU (Q949H0) 40S ribosomal protein S7	171	4e-43
3	RS7_ORYSA (Q8LJU5) 40S ribosomal protein S7	170	9e-43
4	RS7_AVIMR (Q9ZNS1) 40S ribosomal protein S7	144	4e-35
5	RS7_BRAOL (Q9XH45) 40S ribosomal protein S7	143	9e-35
6	RS7_XENLA (P02362) 40S ribosomal protein S7 (S8)	108	3e-24
7	RS7_NEUCR (O43105) 40S ribosomal protein S7	107	5e-24
8	RS7_ICTPU (Q90YR7) 40S ribosomal protein S7	107	9e-24
9	RS7_RAT (P62083) 40S ribosomal protein S7 (S8)	105	3e-23
10	RS7_MOUSE (P62082) 40S ribosomal protein S7	105	3e-23
11	RS7_HUMAN (P62081) 40S ribosomal protein S7	105	3e-23
12	RS7_FELCA (Q5RT64) 40S ribosomal protein S7	105	3e-23
13	RS7_CULQU (Q9NB21) 40S ribosomal protein S7	103	8e-23
14	RS7_FUGRU (P50894) 40S ribosomal protein S7	103	8e-23
15	RS7_DROYA (P62085) 40S ribosomal protein S7	103	8e-23
16	RS7_DROME (Q9VA91) 40S ribosomal protein S7	103	8e-23
17	RS7_BRARE (P62084) 40S ribosomal protein S7	102	2e-22
18	RS7_SCHPO (Q10101) 40S ribosomal protein S7	100	8e-22
19	RS7_SPOFR (Q962S0) 40S ribosomal protein S7	99	2e-21
20	RS7_MANSE (P48155) 40S ribosomal protein S7	99	2e-21
21	RS7_CAEEL (Q23312) 40S ribosomal protein S7	98	4e-21
22	RS7_ANOGA (P33514) 40S ribosomal protein S7	96	2e-20
23	RS7A_YEAST (P26786) 40S ribosomal protein S7-A (RP30)	95	4e-20
24	RS7B_YEAST (P48164) 40S ribosomal protein S7-B	95	5e-20
25	PLOD1_CHICK (P24802) Procollagen-lysine,2-oxoglutarate 5-dioxyge...	30	1.4
26	SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-dete...	29	2.4
27	KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-ass...	29	2.4
28	PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6...	29	2.4
29	KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-as...	29	3.1
30	E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78)	29	3.1
31	YYO1_CAEEL (Q18904) Probable G-protein coupled receptor C56G3.1	29	3.1
32	Y434_RICPR (O05965) Hypothetical protein RP434	29	3.1
33	CLOCK_DROME (O61735) Circadian locomoter output cycles protein k...	28	4.1
34	KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-as...	28	4.1
35	KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-ass...	28	4.1
36	KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-ass...	28	4.1
37	RS7_SALSA (P47839) 40S ribosomal protein S7 (Fragment)	28	5.4
38	ILVD_METCA (Q606D6) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)	28	5.4
39	CB024_PONPY (Q5R4U5) Protein C2orf24 homolog	28	7.0
40	CB024_MOUSE (Q8K158) Protein C2orf24 homolog	28	7.0
41	PARC_STAES (Q8CSN8) DNA topoisomerase 4 subunit A (EC 5.99.1.-) ...	28	7.0
42	PARC_STAEQ (Q5HPI5) DNA topoisomerase 4 subunit A (EC 5.99.1.-) ...	28	7.0
43	SNX4_KLULA (Q6CTQ0) Sorting nexin-4 (Autophagy-related protein 24)	28	7.0
44	KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-as...	28	7.0
45	YRAK_ECOLI (P43319) Hypothetical fimbrial-like protein yraK prec...	28	7.0
46	APE1_SULTO (Q96ZT9) Probable aminopeptidase 1 (EC 3.4.11.-)	28	7.0
47	KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-ass...	28	7.0
48	KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-ass...	28	7.0
49	KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-ass...	27	9.1
50	GASA1_ARATH (P46689) Gibberellin-regulated protein 1 precursor	27	9.1
51	TTRAP_BRARE (Q5XJA0) TRAF and TNF receptor-associated protein ho...	27	9.1
52	RPOC1_ADICA (Q85FM8) DNA-directed RNA polymerase beta' chain (EC...	27	9.1
53	RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (R...	27	9.1

>RS7_SECCE (Q9XET4) 40S ribosomal protein S7|
          Length = 192

 Score =  179 bits (454), Expect = 1e-45
 Identities = 88/92 (95%), Positives = 89/92 (96%)
 Frame = -3

Query: 383 IVRPPKKGSAVVRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKER 204
           IVRPPKKGSAVVRPRTRTLTAVHDGLL DVVYPAEIVGKRVRYRLDGSKIIKIFLDP ER
Sbjct: 101 IVRPPKKGSAVVRPRTRTLTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMER 160

Query: 203 NNXEYKLDTFTSVYRRLCGKDVVYEYPVAETA 108
           NN EYKLDTFT+VYRRLCGKDVVYEYPVAETA
Sbjct: 161 NNTEYKLDTFTAVYRRLCGKDVVYEYPVAETA 192

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>RS7_HORVU (Q949H0) 40S ribosomal protein S7|
          Length = 191

 Score =  171 bits (433), Expect = 4e-43
 Identities = 81/92 (88%), Positives = 89/92 (96%)
 Frame = -3

Query: 383 IVRPPKKGSAVVRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKER 204
           IVRPPKKGSAV RPRTRTLTAVHDG+L DVVYPAEIVGKRVRYRLDG+K+IKI+LDPKER
Sbjct: 100 IVRPPKKGSAVQRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKER 159

Query: 203 NNXEYKLDTFTSVYRRLCGKDVVYEYPVAETA 108
           NN EYKL+TF++VYRRLCGKDVV+EYPVAETA
Sbjct: 160 NNTEYKLETFSAVYRRLCGKDVVFEYPVAETA 191

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>RS7_ORYSA (Q8LJU5) 40S ribosomal protein S7|
          Length = 192

 Score =  170 bits (430), Expect = 9e-43
 Identities = 81/92 (88%), Positives = 87/92 (94%)
 Frame = -3

Query: 383 IVRPPKKGSAVVRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKER 204
           IVRPPKKGSAVVRPRTRTLTAVHDG+L DVVYPAEIVGKRVRY LDG KI+KIFLDPKER
Sbjct: 101 IVRPPKKGSAVVRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKER 160

Query: 203 NNXEYKLDTFTSVYRRLCGKDVVYEYPVAETA 108
           NN EYKLDTF+SVYRRLCGKDVV++YP+ ETA
Sbjct: 161 NNTEYKLDTFSSVYRRLCGKDVVFDYPMTETA 192

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>RS7_AVIMR (Q9ZNS1) 40S ribosomal protein S7|
          Length = 190

 Score =  144 bits (364), Expect = 4e-35
 Identities = 67/90 (74%), Positives = 80/90 (88%)
 Frame = -3

Query: 383 IVRPPKKGSAVVRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKER 204
           I+RPPKKGSAV RPR+RTLTAVHD +L D+VYPAEIVGKRVRYRLDGSKI+K+FLDPK +
Sbjct: 101 ILRPPKKGSAVQRPRSRTLTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAK 160

Query: 203 NNXEYKLDTFTSVYRRLCGKDVVYEYPVAE 114
           N+ E KL+TF  VYR+L GKDVV+E+P+ E
Sbjct: 161 NDTENKLETFAGVYRKLSGKDVVFEFPLTE 190

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>RS7_BRAOL (Q9XH45) 40S ribosomal protein S7|
          Length = 191

 Score =  143 bits (361), Expect = 9e-35
 Identities = 65/90 (72%), Positives = 79/90 (87%)
 Frame = -3

Query: 383 IVRPPKKGSAVVRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKER 204
           I+RPPKKGSAV RPR RTLT+VH+ +L DV YPAEIVGKR RYR+DG+KI+K++L+PKER
Sbjct: 101 IMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKER 160

Query: 203 NNXEYKLDTFTSVYRRLCGKDVVYEYPVAE 114
           NN EYKL+T   VYR+L GKDVV+EYPVA+
Sbjct: 161 NNTEYKLETMVGVYRKLTGKDVVFEYPVAD 190

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>RS7_XENLA (P02362) 40S ribosomal protein S7 (S8)|
          Length = 194

 Score =  108 bits (270), Expect = 3e-24
 Identities = 46/75 (61%), Positives = 66/75 (88%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+VYP+EIVG+R+R +LDGS++IK+ LD  ++NN E+K++TF+ 
Sbjct: 116 RPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDVV+E+P
Sbjct: 176 VYKKLTGKDVVFEFP 190

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>RS7_NEUCR (O43105) 40S ribosomal protein S7|
          Length = 202

 Score =  107 bits (268), Expect = 5e-24
 Identities = 47/76 (61%), Positives = 65/76 (85%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+VYP EIVGKR+R + DGSK +K+ LD KER + +Y+LDT+++
Sbjct: 122 RPRSRTLTAVHDAILTDLVYPVEIVGKRLRVKEDGSKTLKVILDEKERGSVDYRLDTYSA 181

Query: 167 VYRRLCGKDVVYEYPV 120
           VYRRL GK+V++E+P+
Sbjct: 182 VYRRLTGKNVLFEFPL 197

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>RS7_ICTPU (Q90YR7) 40S ribosomal protein S7|
          Length = 194

 Score =  107 bits (266), Expect = 9e-24
 Identities = 46/75 (61%), Positives = 64/75 (85%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+VYP+EIVGKR+R +LD S++IK+ LD  ++NN E+K++TF  
Sbjct: 116 RPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDVV+E+P
Sbjct: 176 VYKKLTGKDVVFEFP 190

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>RS7_RAT (P62083) 40S ribosomal protein S7 (S8)|
          Length = 194

 Score =  105 bits (262), Expect = 3e-23
 Identities = 45/75 (60%), Positives = 65/75 (86%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K++TF+ 
Sbjct: 116 RPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDV +E+P
Sbjct: 176 VYKKLTGKDVNFEFP 190

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>RS7_MOUSE (P62082) 40S ribosomal protein S7|
          Length = 194

 Score =  105 bits (262), Expect = 3e-23
 Identities = 45/75 (60%), Positives = 65/75 (86%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K++TF+ 
Sbjct: 116 RPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDV +E+P
Sbjct: 176 VYKKLTGKDVNFEFP 190

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>RS7_HUMAN (P62081) 40S ribosomal protein S7|
          Length = 194

 Score =  105 bits (262), Expect = 3e-23
 Identities = 45/75 (60%), Positives = 65/75 (86%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K++TF+ 
Sbjct: 116 RPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDV +E+P
Sbjct: 176 VYKKLTGKDVNFEFP 190

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>RS7_FELCA (Q5RT64) 40S ribosomal protein S7|
          Length = 194

 Score =  105 bits (262), Expect = 3e-23
 Identities = 45/75 (60%), Positives = 65/75 (86%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAVHD +L D+V+P+EIVGKR+R +LDGS++IK+ LD  ++NN E+K++TF+ 
Sbjct: 116 RPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDV +E+P
Sbjct: 176 VYKKLTGKDVNFEFP 190

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>RS7_CULQU (Q9NB21) 40S ribosomal protein S7|
          Length = 192

 Score =  103 bits (258), Expect = 8e-23
 Identities = 44/75 (58%), Positives = 64/75 (85%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAV+D +L D+V+PAE+VGKR+R +LDGS++IK+ LD  ++   E+K+DTFTS
Sbjct: 114 RPRSRTLTAVYDAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFTS 173

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L G+DV +E+P
Sbjct: 174 VYKKLTGRDVTFEFP 188

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>RS7_FUGRU (P50894) 40S ribosomal protein S7|
          Length = 194

 Score =  103 bits (258), Expect = 8e-23
 Identities = 43/75 (57%), Positives = 65/75 (86%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLT+VHD +L D+V+P+EIVGKR+R ++D S++IK+ LD  ++NN E+K++TF+ 
Sbjct: 116 RPRSRTLTSVHDAILEDLVFPSEIVGKRIRVKMDSSRLIKVHLDKAQQNNVEHKVETFSG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDVV+E+P
Sbjct: 176 VYKKLTGKDVVFEFP 190

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>RS7_DROYA (P62085) 40S ribosomal protein S7|
          Length = 194

 Score =  103 bits (258), Expect = 8e-23
 Identities = 44/75 (58%), Positives = 64/75 (85%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAV+D +L D+V+PAEIVGKR+R +LDGS+++K+ LD  ++   E+K+DTFTS
Sbjct: 114 RPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTS 173

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L G+DV +E+P
Sbjct: 174 VYKKLTGRDVTFEFP 188

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>RS7_DROME (Q9VA91) 40S ribosomal protein S7|
          Length = 194

 Score =  103 bits (258), Expect = 8e-23
 Identities = 44/75 (58%), Positives = 64/75 (85%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLTAV+D +L D+V+PAEIVGKR+R +LDGS+++K+ LD  ++   E+K+DTFTS
Sbjct: 114 RPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTS 173

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L G+DV +E+P
Sbjct: 174 VYKKLTGRDVTFEFP 188

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>RS7_BRARE (P62084) 40S ribosomal protein S7|
          Length = 194

 Score =  102 bits (255), Expect = 2e-22
 Identities = 43/75 (57%), Positives = 63/75 (84%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLT VHD +L D+V+P+EIVGKR+R +LD S++IK+ LD  ++NN E+K++TF  
Sbjct: 116 RPRSRTLTNVHDAILEDLVFPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAG 175

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L GKDV++E+P
Sbjct: 176 VYKKLTGKDVIFEFP 190

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>RS7_SCHPO (Q10101) 40S ribosomal protein S7|
          Length = 195

 Score =  100 bits (249), Expect = 8e-22
 Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
 Frame = -3

Query: 383 IVRPPKKGSAVV--RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPK 210
           I+  P + S V   RPR+RTLTAVH+ +L D+V+P EI+GKR R   DG K IK+FLD +
Sbjct: 100 ILPKPGRKSRVTQKRPRSRTLTAVHNAILEDIVFPTEIIGKRTRQATDGRKTIKVFLDNR 159

Query: 209 ERNNXEYKLDTFTSVYRRLCGKDVVYEYPVA 117
           + N  +YKL +F+SVY +L GK+V +E+PVA
Sbjct: 160 DANTVDYKLGSFSSVYHKLTGKNVTFEFPVA 190

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>RS7_SPOFR (Q962S0) 40S ribosomal protein S7|
          Length = 190

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 42/75 (56%), Positives = 63/75 (84%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLT+V+D +L D+V+PAEIVGKR+R +LDGS++IK+ LD  ++   E+K+DTF S
Sbjct: 112 RPRSRTLTSVYDAILEDLVFPAEIVGKRIRIKLDGSQLIKVHLDKNQQTTIEHKVDTFQS 171

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L G++V +E+P
Sbjct: 172 VYKKLTGREVTFEFP 186

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>RS7_MANSE (P48155) 40S ribosomal protein S7|
          Length = 190

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 42/75 (56%), Positives = 63/75 (84%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+RTLT+V+D +L D+V+PAEIVGKR+R +LDGS++IK+ LD  ++   E+K+DTF S
Sbjct: 112 RPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQS 171

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L G++V +E+P
Sbjct: 172 VYKKLTGREVTFEFP 186

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>RS7_CAEEL (Q23312) 40S ribosomal protein S7|
          Length = 194

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
 Frame = -3

Query: 383 IVRPPKKGSAV-----VRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFL 219
           I+  P++GS        RPR+RTLTAVHD  L ++VYPAE+VG+R+R +LDG K+ K+ L
Sbjct: 99  ILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVKLDGKKVYKVHL 158

Query: 218 DPKERNNXEYKLDTFTSVYRRLCGKDVVYEYP 123
           D   + N  +K+  F SVYR+L GKDV +E+P
Sbjct: 159 DKSHQTNVGHKIGVFASVYRKLTGKDVTFEFP 190

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>RS7_ANOGA (P33514) 40S ribosomal protein S7|
          Length = 192

 Score = 96.3 bits (238), Expect = 2e-20
 Identities = 40/75 (53%), Positives = 61/75 (81%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKLDTFTS 168
           RPR+  +TAV+D +L D+V+PAE+VGKR+R +LDGS++IK+ LD  ++   E+K+DTF S
Sbjct: 114 RPRSPNVTAVYDAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFAS 173

Query: 167 VYRRLCGKDVVYEYP 123
           VY++L G+DV +E+P
Sbjct: 174 VYKKLTGRDVTFEFP 188

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>RS7A_YEAST (P26786) 40S ribosomal protein S7-A (RP30)|
          Length = 189

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query: 383 IVRPPKKGSAVV--RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPK 210
           I+  P + S  V  RPR+RTLTAVHD +L D+V+P EIVGKRVRY + G+KI K+ LD K
Sbjct: 97  ILPKPSRTSRQVQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSK 156

Query: 209 ERNNXEYKLDTFTSVYRRLCGKDVVYEYP 123
           +    +YKL++F +VY +L GK +V+E P
Sbjct: 157 DVQQIDYKLESFQAVYNKLTGKQIVFEIP 185

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>RS7B_YEAST (P48164) 40S ribosomal protein S7-B|
          Length = 190

 Score = 94.7 bits (234), Expect = 5e-20
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = -3

Query: 383 IVRPPKKGSAVV--RPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPK 210
           I+  P + S  V  RPR+RTLTAVHD +L D+V+P EIVGKRVRY + G+KI K+ LD K
Sbjct: 98  ILPKPSRTSRQVQKRPRSRTLTAVHDKVLEDMVFPTEIVGKRVRYLVGGNKIQKVLLDSK 157

Query: 209 ERNNXEYKLDTFTSVYRRLCGKDVVYEYP 123
           +    +YKL++F +VY +L GK +V+E P
Sbjct: 158 DVQQIDYKLESFQAVYNKLTGKQIVFEIP 186

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>PLOD1_CHICK (P24802) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1|
           precursor (EC 1.14.11.4) (Lysyl hydroxylase 1) (LH1)
          Length = 730

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -3

Query: 230 KIFLDPKERNNXEYKLDTFTSVYRRLCG--KDVVYEYPVAETA*RSFL 93
           KIFLDP++R N    LD  + +++ L G   +VV ++  A    R+ L
Sbjct: 188 KIFLDPEKRENINISLDHRSRIFQNLNGALDEVVLKFENARVRARNLL 235

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>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 395

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 263 HVSPQSQLGKQHPXKDHHEQQSKFLYEGEQQQ 358
           H+  Q Q  +Q    +HH+QQ +F    +QQQ
Sbjct: 142 HLQQQQQQQQQQQFHNHHQQQQQFYDHHQQQQ 173



 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 263 HVSPQSQLGKQHPXKDHHEQQSKFLYEGEQQQNLF 367
           H   Q Q  +Q    DHH+Q+ +F ++  QQQ  F
Sbjct: 169 HQQQQQQQQQQQQFHDHHQQKQQF-HDHHQQQQQF 202

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>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein|
           4.5) (Ultrahigh sulfur keratin-associated protein 4.5)
          Length = 186

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETC 262
           CE++  R CCC PS     CC       CC  +  C   C
Sbjct: 71  CESSCCRPCCCRPSCCQTTCCR----TTCCRTTCCCPSCC 106

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>PCSK6_RAT (Q63415) Proprotein convertase subtilisin/kexin type 6 precursor|
           (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme
           4) (Subtilisin/kexin-like protease PACE4)
           (Subtilisin-like proprotein convertase 4) (SPC4)
          Length = 937

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/61 (27%), Positives = 23/61 (37%)
 Frame = +2

Query: 20  PNNKELKQAVAYSIHEQESQPICKSRRIFKQFQQRGTRIPHPCHKACGTLK*RYPTCTLX 199
           P+  +    V +S+   ++   C S      F     R    CHK C T   R PT  L 
Sbjct: 675 PSADQCLNCVHFSLGNSKTNRKCVSECPLGYFGDTAARRCRRCHKGCETCTGRSPTQCLS 734

Query: 200 C 202
           C
Sbjct: 735 C 735

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>KR415_HUMAN (Q9BYQ5) Keratin-associated protein 4-15 (Keratin-associated|
           protein 4.15) (Ultrahigh sulfur keratin-associated
           protein 4.15) (Fragment)
          Length = 193

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/44 (34%), Positives = 17/44 (38%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETCQISS 250
           C+ T  R  CC PS     CC        C     C  +C ISS
Sbjct: 58  CQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCSISS 101

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>E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78)|
          Length = 866

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 266 VSPQSQLGKQHPXKDHHEQQSKFLYEGEQQQNL 364
           +SPQ Q  +QH  +   +QQ +  + G+QQ  L
Sbjct: 179 LSPQQQQQRQHTHQQQQQQQQQQQHPGQQQHQL 211

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>YYO1_CAEEL (Q18904) Probable G-protein coupled receptor C56G3.1|
          Length = 490

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 235 SSRSSWTQRNATTQSTSWIPSLQ-CTAGFVARMWYTSTPLLKLLE 104
           S RSS T+RN T Q T+   SL    AG  A +W+  T +  L++
Sbjct: 309 SIRSSITERNKTNQRTNRTTSLLIAMAGSYAALWFPFTLITFLID 353

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>Y434_RICPR (O05965) Hypothetical protein RP434|
          Length = 212

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/85 (24%), Positives = 37/85 (43%)
 Frame = -3

Query: 362 GSAVVRPRTRTLTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNXEYKL 183
           GS     + +  +   + ++ DV Y      K+V   +  ++ IK+F D    NN    +
Sbjct: 27  GSTSEEEQIKNKSYFGEPVIKDVTYSTVKDHKKVERNVSRTQDIKVFKDIIVENNINAVV 86

Query: 182 DTFTSVYRRLCGKDVVYEYPVAETA 108
           D    +++RL   D V     A+TA
Sbjct: 87  DGIEQIHKRLYSFDPVKFINNAKTA 111

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>CLOCK_DROME (O61735) Circadian locomoter output cycles protein kaput (dCLOCK)|
           (dPAS1)
          Length = 1027

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +2

Query: 239 SSHQDDI*HVSPQSQL----GKQHPXKDHHEQQSKFLYEGEQQQN 361
           +S Q  + HVS QSQ      ++H  ++HH Q    + + +Q QN
Sbjct: 515 TSRQSMMTHVSSQSQRQRSHHREHHRENHHNQSHHHMQQQQQHQN 559

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>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated|
           protein 5.11) (Ultrahigh sulfur keratin-associated
           protein 5.11)
          Length = 156

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETC 262
           C+++  +  CC P      CC    F  CC  S  C   C
Sbjct: 112 CQSSCCQSSCCKPCCCQSSCCQSSCFKPCCCQSSCCVPVC 151



 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETC 262
           C+++  + CCC  S     CC       CC  S  C  +C
Sbjct: 102 CQSSCSKPCCCQSSCCQSSCCK-----PCCCQSSCCQSSC 136

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>KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-associated protein|
           4.4) (Ultrahigh sulfur keratin-associated protein 4.4)
          Length = 166

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETC 262
           C+ T  R  CC PS     CC       CC P+  C   C
Sbjct: 91  CQTTCCRTTCCRPSCCRPQCCQ----SVCCQPTCCCPSYC 126

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>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS-*WSFXGCCLP---S*DCGETCQISS 250
           C ++  +  CC PS     CC    S   CC P   S  CG +C  SS
Sbjct: 141 CGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSS 188

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>RS7_SALSA (P47839) 40S ribosomal protein S7 (Fragment)|
          Length = 44

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -3

Query: 347 RPRTRTLTAVHDGL 306
           RPR+RTLTAVHD +
Sbjct: 31  RPRSRTLTAVHDAI 44

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>ILVD_METCA (Q606D6) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 562

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 329 LTAVHDGLLXDVVYPAEIVGKRVRYRLDGSKI 234
           L   HDG   DVV   E VG R  +R+D +++
Sbjct: 153 LPGCHDGKKLDVVSVFEAVGARANHRIDDAEL 184

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>CB024_PONPY (Q5R4U5) Protein C2orf24 homolog|
          Length = 410

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -1

Query: 187 SWIPSLQCTAGFVARMWYTSTPLLKLLEDPS*FAYWLALLFMY*ICNRLLEL 32
           SW+ S         R WYT T L  LLE P+    W   L    +C RL++L
Sbjct: 186 SWLESCVAEQQGRRRGWYTYTDLCVLLEQPT----WQLALGS--LCQRLVKL 231

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>CB024_MOUSE (Q8K158) Protein C2orf24 homolog|
          Length = 407

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -1

Query: 187 SWIPSLQCTAGFVARMWYTSTPLLKLLEDPS*FAYWLALLFMY*ICNRLLEL 32
           SW+ S         R WYT T L  LLE P+    W   L    +C RL++L
Sbjct: 186 SWLESCVAEQQGRRRGWYTYTDLCVLLEQPT----WQLALGS--LCQRLVKL 231

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>PARC_STAES (Q8CSN8) DNA topoisomerase 4 subunit A (EC 5.99.1.-) (Topoisomerase|
           IV subunit A)
          Length = 800

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 148 PQSLRYTEVKVSNLYSXLLRSFGSKKILMI 237
           P ++RYTE K+S L   LLR    + +  I
Sbjct: 114 PAAMRYTEAKLSQLSEELLRDINKETVSFI 143

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>PARC_STAEQ (Q5HPI5) DNA topoisomerase 4 subunit A (EC 5.99.1.-) (Topoisomerase|
           IV subunit A)
          Length = 800

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 148 PQSLRYTEVKVSNLYSXLLRSFGSKKILMI 237
           P ++RYTE K+S L   LLR    + +  I
Sbjct: 114 PAAMRYTEAKLSQLSEELLRDINKETVSFI 143

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>SNX4_KLULA (Q6CTQ0) Sorting nexin-4 (Autophagy-related protein 24)|
          Length = 400

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 204 AFLWVQEDLDDFRAIKTISDTFPHNLSWVNNILQKTI 314
           AF  V    D+F  IK  S+   HNLS ++ +  K++
Sbjct: 155 AFKHVNRQRDEFVEIKEKSEKLDHNLSHLDKLFHKSV 191

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>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated|
           protein 4.12) (Ultrahigh sulfur keratin-associated
           protein 4.12)
          Length = 201

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/44 (34%), Positives = 17/44 (38%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETCQISS 250
           C+ T  R  CC PS     CC        C     C  +C ISS
Sbjct: 106 CQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISS 149

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>YRAK_ECOLI (P43319) Hypothetical fimbrial-like protein yraK precursor|
          Length = 363

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = -1

Query: 274 WGNVSDIVLMARKSSRSSWTQRNATTQSTSWIPSLQCTAGFVARMWYTSTPLL 116
           + +V D V + +  + +     +AT  ST+W  +  C+AG   ++ Y  +P+L
Sbjct: 36  YSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVL 88

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>APE1_SULTO (Q96ZT9) Probable aminopeptidase 1 (EC 3.4.11.-)|
          Length = 786

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 25/92 (27%), Positives = 40/92 (43%)
 Frame = +3

Query: 105 SSSFSNGVLVYHILATKPAVH*SEGIQLVLXVVAFLWVQEDLDDFRAIKTISDTFPHNLS 284
           SSS S  + V  ++A + A H   G  + L     LW+ E    F A K++ + FP   S
Sbjct: 255 SSSVSQKLSVSAVIAHELA-HQWFGDMVTLKWWDDLWLNESFATFMAYKSLKEIFPQWES 313

Query: 285 WVNNILQKTIMNSSQSSCTRANNSRTFFGWPH 380
             + I  +T+   ++ S    +   T    PH
Sbjct: 314 EGHFIYDETLSALTEDSLLNTHPIETHVKDPH 345

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>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein|
           5.7) (Ultrahigh sulfur keratin-associated protein 5.7)
           (Keratin-associated protein 5-3) (Keratin-associated
           protein 5.3)
          Length = 165

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -2

Query: 381 CEATQKRFCCCSPSYKNFDCCS*WSFXGCCLPS*DCGETCQISS 250
           C+++  + CCC  S     CCS      CC  S  C   C  SS
Sbjct: 112 CQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQSS-CCNPCCSQSS 154

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>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = -2

Query: 354 CCSPSYKNFDCCS*WSFXGCCLP---S*DCGETCQISS 250
           CCS S +   CC       CC P   S  CG +C  SS
Sbjct: 115 CCSSSGRGSSCCQ----SSCCKPCCSSSGCGSSCCQSS 148

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>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = -2

Query: 354 CCSPSYKNFDCCS*WSFXGCCLPS*DCGETCQISS 250
           CC PS  +  CC        C     CG +C  SS
Sbjct: 75  CCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQSS 109

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>GASA1_ARATH (P46689) Gibberellin-regulated protein 1 precursor|
          Length = 98

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 122 RGTRIPHPCHKACGTLK*RYPTCTLXC-CVPLG 217
           R +R P  CH+ACG       TC   C CVP G
Sbjct: 49  RLSRRPRLCHRACG-------TCCYRCNCVPPG 74

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>TTRAP_BRARE (Q5XJA0) TRAF and TNF receptor-associated protein homolog|
          Length = 369

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 51  HIQYMNKRASQYANQEGSSSSFSNGVLV 134
           ++QY+ KRA  Y   EGS   +  G+++
Sbjct: 166 YVQYLKKRAVSYLFFEGSDDGYFTGIML 193

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>RPOC1_ADICA (Q85FM8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 694

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 82  NMQIKKDLQAVSATGYSYTTS 144
           N Q+K+ +Q VS   +SYTTS
Sbjct: 655 NQQLKEAMQGVSKNSFSYTTS 675

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>RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
           replicase) (Protein A)
          Length = 981

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 248 QDDI*HVSPQSQLGKQHPXKDHHEQQSKFLYEGEQQQNLF 367
           +D + H+ P++ LG+ +P     EQQSK L       N +
Sbjct: 464 RDFVRHLVPEAGLGRPYPLTYVEEQQSKPLQRARNDANRY 503


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,345,939
Number of Sequences: 219361
Number of extensions: 1146420
Number of successful extensions: 3971
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3938
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result