ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11c22 |
|---|---|
| Clone Library Name | barley_pub |
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 45.8 bits (107), Expect = 1e-04 Identities = 26/74 (35%), Positives = 37/74 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+++ F G+VT + L + G R F F+ + +A +AVK K ID +EV Sbjct: 17 KLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARIEVEF 76 Query: 499 AKPLSDKKPDHSFK 458 AK SD SFK Sbjct: 77 AKTFSDPTVPLSFK 90
>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +KD F GEV + V K GH + FGFV F E + +K + S+++ IDG+ + + Sbjct: 120 LKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM--SQRHMIDGRWCDCKL 177 Query: 499 AKPLSDKKPDHSFK 458 P S + PD + Sbjct: 178 --PNSKQSPDEPLR 189
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/45 (37%), Positives = 30/45 (66%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKKPD 470 +D+ FVHF +R +A+KA+ EI+G+ +E+ +AKP K+ + Sbjct: 374 KDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKE 418
>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 595 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPL 488 RD+ FVHF+ R A++A+K +DG +EV++AKP+ Sbjct: 266 RDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 304
>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPL 488 RD+ FVHF+ R A++A+K +DG +EV++AKP+ Sbjct: 266 RDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 304
>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPL 488 RD+ FVHF+ R A++A+K +DG +EV++AKP+ Sbjct: 266 RDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 304
>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 587 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPL 488 RD+ FVHF+ R A++A+K +DG +EV++AKP+ Sbjct: 266 RDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPV 304
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 39.7 bits (91), Expect = 0.009 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 17/90 (18%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K +F +G V ++ +P G R F FV F A KA+KG+ EI G+ + V A Sbjct: 129 LKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTVAVDWA 188 Query: 496 -----------------KPLSDKKPDHSFK 458 K SD+KP S K Sbjct: 189 VAKDKYKDAQHASAPGVKKSSDRKPKESGK 218
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 39.7 bits (91), Expect = 0.009 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKKPD 470 +D+ F+HF ER A+KA++ +++G+ +E+ AKP K+ + Sbjct: 281 KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE 325
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 39.7 bits (91), Expect = 0.009 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKKPD 470 +D+ F+HF ER A+KA++ +++G+ +E+ AKP K+ + Sbjct: 371 KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE 415
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 39.7 bits (91), Expect = 0.009 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKKPD 470 +D+ F+HF ER A+KA++ +++G+ +E+ AKP K+ + Sbjct: 371 KDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE 415
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKA-GHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++LF G +++I L K G + F F+ F R A +A+ G + D +L V Sbjct: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 314 Query: 499 AKP 491 AKP Sbjct: 315 AKP 317
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKA-GHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++LF G +++I L K G + F F+ F R A +A+ G + D +L V Sbjct: 255 LQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 314 Query: 499 AKP 491 AKP Sbjct: 315 AKP 317
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 39.3 bits (90), Expect = 0.011 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K +F G V ++ +P G R FGFV F A KA+KG EI G+ + V A Sbjct: 129 LKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWA 188
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 39.3 bits (90), Expect = 0.011 Identities = 20/70 (28%), Positives = 38/70 (54%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K F +G+++ V+ ++G+ R FGFV+F +A AV+ + VL V Sbjct: 240 ELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGR 299 Query: 499 AKPLSDKKPD 470 A+ SD++ + Sbjct: 300 AQKKSDREEE 309
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 39.3 bits (90), Expect = 0.011 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = -1 Query: 670 DLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 D F V G++ + + G + FGFVHF E +A +A+ ++GQ E+ +A Sbjct: 143 DTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQ--EIYVAPH 200 Query: 490 LSDKKPD 470 LS K+ D Sbjct: 201 LSRKERD 207 Score = 35.8 bits (81), Expect = 0.12 Identities = 18/65 (27%), Positives = 34/65 (52%) Frame = -1 Query: 673 KDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 ++LF G + L G + FGFV++ + A+KAV+ E++G+ L V A+ Sbjct: 235 QELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQ 294 Query: 493 PLSDK 479 +++ Sbjct: 295 KKNER 299 Score = 33.1 bits (74), Expect = 0.80 Identities = 17/62 (27%), Positives = 33/62 (53%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+++ F +G +T + + G + FGFV F+ A KA+ + + G+ L V++ Sbjct: 336 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAI 395 Query: 499 AK 494 A+ Sbjct: 396 AQ 397
>MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing protein 1| Length = 769 Score = 38.1 bits (87), Expect = 0.025 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = -1 Query: 625 PAKAGHKRD--FGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 P + G K +GFV F + +A KA+K E +EIDG+ LEV A+ Sbjct: 572 PKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQ 617 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = -1 Query: 670 DLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVL 512 DLF HG++T+++LPPA G V F A +A K + VL Sbjct: 435 DLFAPHGKLTRVLLPPAGT-----LGVVEFENHMDAGRAFKALAYRRLGNAVL 482
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 37.7 bits (86), Expect = 0.032 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K++F G + + +G R FGFV++ A KAV E++G+++ V Sbjct: 206 RLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGR 265 Query: 499 AK 494 A+ Sbjct: 266 AQ 267 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ F +G +T + + GH + FGFV F+ A KAV + + L V++ Sbjct: 309 RLRKEFSPYGTITSTKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVAL 367 Query: 499 AKPLSDKK 476 A+ ++K Sbjct: 368 AQRKEERK 375
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 37.7 bits (86), Expect = 0.032 Identities = 19/69 (27%), Positives = 35/69 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +V+D+F +G + + + K+G F FV F + A AV+ + YE DG+ + V Sbjct: 24 EVEDIFHKYGRIKYVDI---KSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80 Query: 499 AKPLSDKKP 473 + + + P Sbjct: 81 TRGVGPRGP 89
>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) Length = 981 Score = 37.7 bits (86), Expect = 0.032 Identities = 26/74 (35%), Positives = 40/74 (54%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K++ LFE GEV +I + G R + +V F E SAL+A++ K ++G+ + VS Sbjct: 739 KLRPLFEACGEVVQIRPIFSNRGDFRGYRYVEFKEEKSALQALEMDRK-SVEGRPMFVS- 796 Query: 499 AKPLSDKKPDHSFK 458 P DK + FK Sbjct: 797 --PCVDKSKNPDFK 808 Score = 34.3 bits (77), Expect = 0.36 Identities = 17/70 (24%), Positives = 36/70 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++++ + HG V + L +AG + +V + S A +AV + I V++V++ Sbjct: 834 ELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIKVAI 893 Query: 499 AKPLSDKKPD 470 + P K P+ Sbjct: 894 SNPPQRKVPE 903
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 37.4 bits (85), Expect = 0.042 Identities = 22/67 (32%), Positives = 33/67 (49%) Frame = -1 Query: 670 DLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 DLF GE+T + L + R FGFV++A A KAV E G+ L V A+ Sbjct: 279 DLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQK 338 Query: 490 LSDKKPD 470 +++ + Sbjct: 339 KHEREEE 345 Score = 30.8 bits (68), Expect = 4.0 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 7/129 (5%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K F G +T + + G + FGFV + A KAV + + G+ L V++ Sbjct: 379 RLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVAL 438 Query: 499 AKPLSDKKPDHSFKXXXXXXXXXXXXXXXXXXXXXXXXXXXGFNQPMIYGRG--PAPA-- 332 A+ K+ S G P+IYG G P PA Sbjct: 439 AQ---RKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAVQYGATGPLIYGPGGYPIPAAV 495 Query: 331 ---GMRMVP 314 GM MVP Sbjct: 496 NGRGMPMVP 504
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 37.4 bits (85), Expect = 0.042 Identities = 16/70 (22%), Positives = 36/70 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++++F G + + +G R FGFV++ A KAV E++G+++ V Sbjct: 206 RLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKRIERQSE 275 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ F +G +T + + GH + FGFV F+ A KAV + + L V++ Sbjct: 309 RLRKEFLPYGTITSAKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVAL 367 Query: 499 AKPLSDKK 476 A+ ++K Sbjct: 368 AQRKEERK 375
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 37.4 bits (85), Expect = 0.042 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K+LF +G + + +G + FGFV + +A KAV IDG+VL V Sbjct: 214 KLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGR 273 Query: 499 AK 494 A+ Sbjct: 274 AQ 275
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 37.4 bits (85), Expect = 0.042 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K+LF +G + + +G + FGFV + +A KAV IDG+VL V Sbjct: 214 KLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGR 273 Query: 499 AK 494 A+ Sbjct: 274 AQ 275
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 37.4 bits (85), Expect = 0.042 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K+LF +G + + +G + FGFV + +A KAV IDG+VL V Sbjct: 214 KLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGR 273 Query: 499 AK 494 A+ Sbjct: 274 AQ 275
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 37.4 bits (85), Expect = 0.042 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K+LF +G + + +G + FGFV + +A KAV IDG+VL V Sbjct: 214 KLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGR 273 Query: 499 AK 494 A+ Sbjct: 274 AQ 275
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 37.4 bits (85), Expect = 0.042 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K+LF +G + + +G + FGFV + +A KAV IDG+VL V Sbjct: 214 KLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGR 273 Query: 499 AK 494 A+ Sbjct: 274 AQ 275
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 37.4 bits (85), Expect = 0.042 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K+LF +G + + +G + FGFV + +A KAV IDG+VL V Sbjct: 214 KLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGR 273 Query: 499 AK 494 A+ Sbjct: 274 AQ 275
>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110) Length = 963 Score = 37.4 bits (85), Expect = 0.042 Identities = 26/74 (35%), Positives = 40/74 (54%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K++ LFE GEV +I + G R + +V F E SAL+A++ K ++G+ + VS Sbjct: 721 KLRPLFEACGEVVQIRPIFSNRGDFRGYCYVEFKEEKSALQALEMDRK-SVEGRPMFVS- 778 Query: 499 AKPLSDKKPDHSFK 458 P DK + FK Sbjct: 779 --PCVDKSKNPDFK 790 Score = 33.9 bits (76), Expect = 0.47 Identities = 16/70 (22%), Positives = 36/70 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++++ + HG V + L +AG + +V + S A +AV + I +++V++ Sbjct: 816 ELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAI 875 Query: 499 AKPLSDKKPD 470 + P K P+ Sbjct: 876 SNPPQRKVPE 885
>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)| Length = 414 Score = 37.4 bits (85), Expect = 0.042 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQ 518 +K+ F GEV + V K GH + FGFV F E + +K + S+++ IDG+ Sbjct: 120 LKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM--SQRHMIDGR 171
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 37.4 bits (85), Expect = 0.042 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = -1 Query: 670 DLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 +LFE G V + V+ G R FGFV + + A + YE+DG+ L V+ Sbjct: 105 ELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGP 164 Query: 493 PLSDKKPDHSFK 458 P +K+ + SF+ Sbjct: 165 P-PEKRENSSFR 175
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 37.4 bits (85), Expect = 0.042 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = -1 Query: 670 DLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 +LFE G V + V+ G R FGFV + + A + YE+DG+ L V+ Sbjct: 105 ELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGP 164 Query: 493 PLSDKKPDHSFK 458 P +K+ + SF+ Sbjct: 165 P-PEKRENSSFR 175
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 37.0 bits (84), Expect = 0.055 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ F +GE+ V+ + G R FGFV F+ +S L A++ E+DG+ + V+ Sbjct: 24 LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQ 83 Query: 499 AK 494 A+ Sbjct: 84 AQ 85
>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1| Length = 827 Score = 37.0 bits (84), Expect = 0.055 Identities = 22/61 (36%), Positives = 31/61 (50%) Frame = -1 Query: 649 EVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKKPD 470 +VT + L PA R GFV + A +AVK + I + V +AKP++D KP Sbjct: 31 QVTDVKLIPA-----RHIGFVGYKSAEDAARAVKYFNRSFIRMSRISVDIAKPIADSKPQ 85 Query: 469 H 467 H Sbjct: 86 H 86
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 37.0 bits (84), Expect = 0.055 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ F+ G V ++ G + FGFV F+ A A + E EIDG + + A Sbjct: 518 LKEAFD--GSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFA 575 Query: 496 KPLSDKK 476 KP D + Sbjct: 576 KPKGDSQ 582
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 37.0 bits (84), Expect = 0.055 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Frame = -1 Query: 667 LFEVHGEVTKIVLPPAK-AGHKRDFGFVHF---AERSSALKAVKGSEKYEIDGQVLEVSM 500 +F +G V ++ LP + G R FGFV AE ++A++A+ G+E G+ L+V+ Sbjct: 20 VFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWM---GRDLKVNK 76 Query: 499 AKPLSDKKPDHSF 461 AKP ++ SF Sbjct: 77 AKPRENRSGGGSF 89
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 36.6 bits (83), Expect = 0.072 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = -1 Query: 664 FEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 FE +G++ + +P K + + FGFV F ER A A+ ++ +DG+ L V++AK Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 36.6 bits (83), Expect = 0.072 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++++F G + + G R FGFV++ A KAV E++G+++ V Sbjct: 206 RLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGR 265 Query: 499 AK 494 A+ Sbjct: 266 AQ 267 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ F +G +T + + GH + FGFV F+ A KAV + + L V++ Sbjct: 309 RLRKEFSPYGTITSAKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVAL 367 Query: 499 AKPLSDKK 476 A+ ++K Sbjct: 368 AQRKEERK 375
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 36.6 bits (83), Expect = 0.072 Identities = 19/70 (27%), Positives = 35/70 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++KDLF G + + ++G + FGFV F A KAV E++G+ + V Sbjct: 206 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 36.6 bits (83), Expect = 0.072 Identities = 19/70 (27%), Positives = 35/70 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++KDLF G + + ++G + FGFV F A KAV E++G+ + V Sbjct: 206 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 36.6 bits (83), Expect = 0.072 Identities = 19/70 (27%), Positives = 35/70 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++KDLF G + + ++G + FGFV F A KAV E++G+ + V Sbjct: 206 RLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (mSART-3) (Tumor-rejection antigen SART3) Length = 962 Score = 36.2 bits (82), Expect = 0.094 Identities = 26/74 (35%), Positives = 40/74 (54%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K++ LFEV GEV +I + G R + +V F E SA +A++ K ++G+ + VS Sbjct: 721 KLRPLFEVCGEVVQIRPIFSNRGDFRGYCYVEFGEEKSAQQALELDRKI-VEGRPMFVS- 778 Query: 499 AKPLSDKKPDHSFK 458 P DK + FK Sbjct: 779 --PCVDKSKNPDFK 790 Score = 35.4 bits (80), Expect = 0.16 Identities = 18/70 (25%), Positives = 36/70 (51%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++D+ + HG V + L +AG + +V + S A +AV + I V++V++ Sbjct: 816 ELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKVAI 875 Query: 499 AKPLSDKKPD 470 + P K P+ Sbjct: 876 SNPPQRKVPE 885
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 36.2 bits (82), Expect = 0.094 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 +++ LF HG+V V+ + G R FGFV + S A+ + +DG+ + V+ Sbjct: 164 RLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVN 223 Query: 502 MAKPLSDKKPDHSF 461 +A +++P +F Sbjct: 224 VA----EERPRRAF 233 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = -1 Query: 679 KVKDLFEVHG--EVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEV 506 K+ +F+ G E+ +++ + R FGFV + A KAV+ Y++DG+ L V Sbjct: 70 KLAGIFDAAGVVEIAEVIYN-RETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTV 128 Query: 505 SMAKP 491 + A P Sbjct: 129 NKAAP 133
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 36.2 bits (82), Expect = 0.094 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 +++ LF HG+V V+ + G R FGFV A + A+ + +DG+ + V+ Sbjct: 245 RLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVN 304 Query: 502 MAKPLS 485 +A+ S Sbjct: 305 VAEDRS 310 Score = 30.8 bits (68), Expect = 4.0 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Frame = -1 Query: 667 LFEVHG--EVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 LFE G E+ +++ R FGFV + A KAV+ +Y+++G++L V+ A Sbjct: 155 LFEQAGVVEIAEVIYN-RDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAA 213 Query: 493 PLSDK--KPDHSFK 458 ++ +P +F+ Sbjct: 214 RRGERPERPPRTFE 227
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 35.8 bits (81), Expect = 0.12 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ FE G V ++ + G + FGFV F A A + E EIDG + + A Sbjct: 590 LKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 647 Query: 496 KP 491 KP Sbjct: 648 KP 649
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 35.8 bits (81), Expect = 0.12 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ FE G V ++ + G + FGFV F A A + E EIDG + + A Sbjct: 584 LKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 641 Query: 496 KP 491 KP Sbjct: 642 KP 643
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 35.8 bits (81), Expect = 0.12 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ FE G V ++ + G + FGFV F A A + E EIDG + + A Sbjct: 587 LKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 644 Query: 496 KP 491 KP Sbjct: 645 KP 646
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 35.4 bits (80), Expect = 0.16 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ F G++T ++ + G R FGFV F + S A++G E+DG+ + V+ Sbjct: 22 LEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNE 81 Query: 499 AK 494 A+ Sbjct: 82 AQ 83
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 35.4 bits (80), Expect = 0.16 Identities = 16/62 (25%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LF +G++++ + ++FGFVH +S A +A++ Y ++G + V M Sbjct: 17 EIRSLFSQYGKISECDIV-------KNFGFVHMDSKSEADEAIQNLHHYMLNGMAMNVEM 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/69 (26%), Positives = 35/69 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+LF G+ + + G + FGFV + + A KAV+ EI G+++ V A Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266 Query: 496 KPLSDKKPD 470 + +++ + Sbjct: 267 QKKVERQAE 275
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 35.0 bits (79), Expect = 0.21 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +++ FE G ++ ++ G + FGFV F+ A A + E EIDG + + A Sbjct: 569 LRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFA 626 Query: 496 KP 491 KP Sbjct: 627 KP 628
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 35.0 bits (79), Expect = 0.21 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 +++ LF GEV L K AGH +GFV++ A +A+ + + ++VS Sbjct: 35 ELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVS 94 Query: 502 MAKPLSD 482 A+P S+ Sbjct: 95 YARPSSE 101
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 35.0 bits (79), Expect = 0.21 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 +++ LF GEV L K AGH +GFV++ A +A+ + + ++VS Sbjct: 35 ELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVS 94 Query: 502 MAKPLSD 482 A+P S+ Sbjct: 95 YARPSSE 101
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K+LF G + + ++G + FGFV F A KAV E++G+ + V Sbjct: 206 RLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K+LF G + + ++G + FGFV F A KAV E++G+ + V Sbjct: 206 RLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ F+ G V ++ + G + FGFV F A A + E EIDG + + A Sbjct: 589 LKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 646 Query: 496 KP 491 KP Sbjct: 647 KP 648
>REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2| Length = 218 Score = 34.7 bits (78), Expect = 0.27 Identities = 16/59 (27%), Positives = 32/59 (54%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++LF G + K + ++G VHF R+ ALKA+K + +DG+ +++ + Sbjct: 91 IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQL 149
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ F+ G V ++ + G + FGFV F A A + E EIDG + + A Sbjct: 588 LKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 645 Query: 496 KP 491 KP Sbjct: 646 KP 647
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K+ F+ G V ++ + G + FGFV F A A + E EIDG + + A Sbjct: 587 LKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 644 Query: 496 KP 491 KP Sbjct: 645 KP 646
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 34.7 bits (78), Expect = 0.27 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K +F HG +++++L + R F F+ F + A A K + G+ ++V A Sbjct: 24 LKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQA 83 Query: 496 K 494 K Sbjct: 84 K 84
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 34.7 bits (78), Expect = 0.27 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = -1 Query: 667 LFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 LFE G V + V+ G R FGFV + + A + YEIDG+ + V+ A P Sbjct: 106 LFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGP 164 Query: 490 LSDKKPDHSF 461 K+ + SF Sbjct: 165 APAKRENSSF 174 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +K+LF G V V+ +G R FGFV ++ A+ ++DG+ + VS Sbjct: 223 LKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSA 282 Query: 499 AK 494 A+ Sbjct: 283 AE 284
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 34.7 bits (78), Expect = 0.27 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -1 Query: 634 VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 V+ + G R FGFV F+ S L A++ E+DG+ + V+ A+ Sbjct: 39 VITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 34.7 bits (78), Expect = 0.27 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 664 FEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 F +GEV ++ + G R FGFV F + S A++G ++DG+ + V+ A+ Sbjct: 28 FSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 34.3 bits (77), Expect = 0.36 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Frame = -1 Query: 667 LFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 LFE G V + V+ +G R FGFV + + A + YEIDG+ + V+ A P Sbjct: 107 LFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN-AGP 165 Query: 490 LSDKKPDHSF 461 K+ + SF Sbjct: 166 APAKRENSSF 175 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +K+LF G V V+ +G R FGFV ++ A+ ++DG+ + VS Sbjct: 224 LKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSA 283 Query: 499 AK 494 A+ Sbjct: 284 AE 285
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 33.9 bits (76), Expect = 0.47 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -1 Query: 652 GEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKK 476 G++T I +P K R F FV F A A+ + E+ G+ + V++AKP+ K+ Sbjct: 30 GDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKE 89
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 33.9 bits (76), Expect = 0.47 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -1 Query: 652 GEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKK 476 G++T I +P K R F FV F A A+ + E+ G+ + V++AKP+ K+ Sbjct: 30 GDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKE 89
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 33.5 bits (75), Expect = 0.61 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 ++ LFE G V + V+ G R FGFV + S A + YE+DG+ L V+ Sbjct: 106 QLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165 Query: 502 MAKP 491 P Sbjct: 166 AGPP 169 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ LF G+V + V+ +G + FGFV + A+K + ++DG+ + VS Sbjct: 220 LESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSE 279 Query: 499 AK 494 A+ Sbjct: 280 AE 281
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 33.5 bits (75), Expect = 0.61 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -1 Query: 676 VKDLF-EVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEV 506 +KDL E GEVT + L G R G V F + KA++ KY++ G+ L + Sbjct: 107 IKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNI 164
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 33.5 bits (75), Expect = 0.61 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -1 Query: 664 FEVHGE-VTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 F GE V ++ + G R FGFV F + S A++G ++DG+ + V+ A+ Sbjct: 28 FSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 33.5 bits (75), Expect = 0.61 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = -1 Query: 664 FEVHGEV--TKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 F +GEV +KI+L + R FGFV F+ + A++G E+DG+ + V+ A+ Sbjct: 7 FSTYGEVLESKIILD-RETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 33.5 bits (75), Expect = 0.61 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -1 Query: 670 DLFEVHGEVTKIVLPP-AKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 +LF HGEV + +P + + FG+V F+ A KA+ + ID + + + + Sbjct: 285 ELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 344 Query: 493 P 491 P Sbjct: 345 P 345 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -1 Query: 673 KDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVL--EVSM 500 K+ + G + V+ R +G+V F +S A KA++ + EIDG+ + ++S Sbjct: 186 KEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMST 245 Query: 499 AKP 491 +KP Sbjct: 246 SKP 248
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 33.5 bits (75), Expect = 0.61 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -1 Query: 676 VKDLF-EVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEV 506 +KDL E GEVT + L G R G V F + KA++ KY++ G+ L + Sbjct: 116 IKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNI 173
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 33.1 bits (74), Expect = 0.80 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = -1 Query: 649 EVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKK 476 ++T + + K+G+ R F F+ + A A++ ID +EV+MAK +D + Sbjct: 36 QITDVKIVKDKSGNSRRFAFIGYRSEQDAFDAIEYFNGSFIDTARIEVAMAKSFADPR 93
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 33.1 bits (74), Expect = 0.80 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTK-IVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++D F GE+ + +V+ R FGFV FA+ +S K V G +E+D + ++ + Sbjct: 37 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK-VLGQPHHELDSKTIDPKV 95 Query: 499 AKP 491 A P Sbjct: 96 AFP 98
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 33.1 bits (74), Expect = 0.80 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTK-IVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++D F GE+ + +V+ R FGFV FA+ +S K V G +E+D + ++ + Sbjct: 37 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK-VLGQPHHELDSKTIDPKV 95 Query: 499 AKP 491 A P Sbjct: 96 AFP 98
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 33.1 bits (74), Expect = 0.80 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 +++ +F HG+V V+ ++G R FGFV + + +A+ + +DG+ + V+ Sbjct: 206 RLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVN 265 Query: 502 MAK 494 A+ Sbjct: 266 AAE 268 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 R FGFV + A KAV+ +Y+++G++L V+ A P Sbjct: 138 RGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAP 175
>GAG_SRV1 (P04022) Gag polyprotein (Core polyprotein) [Contains: Core protein| p10; Core phosphoprotein pp18; Core protein p12; Core protein p27; Core protein p14; Core protein p4] Length = 657 Score = 33.1 bits (74), Expect = 0.80 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 76 IKKKSYRAKQNTLLNALHQS*QIHHLQKMQ-GKGKTSRADNAGGFLRHRHPAGHHVEEG 249 +K+K + ++ L LHQ+ I LQK++ G + + AGGF R H G H+ +G Sbjct: 225 LKEKIAQLEEQIKLEELHQA-LISKLQKLKTGNETVTSPETAGGFSRTPHWPGQHIPKG 282
>IF34_SCHPO (P78795) Probable eukaryotic translation initiation factor 3| RNA-binding subunit (eIF-3 RNA-binding subunit) (eIF3 p33) (Translation initiation factor eIF3, p33 subunit) Length = 282 Score = 33.1 bits (74), Expect = 0.80 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 +++DLF G + ++ L K G + F FV + +R A+KA + Y + +L Sbjct: 217 ELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILRCE 276 Query: 502 MAKP 491 +KP Sbjct: 277 FSKP 280
>GAG_MPMV (P07567) Gag polyprotein (Core polyprotein) [Contains: Core protein| p10; Core phosphoprotein pp24; Core protein p12; Core protein p27; Core protein p14; Core protein p4] Length = 656 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +1 Query: 76 IKKKSYRAKQNTLLNALHQS*QIHHLQKMQ-GKGKTSRADNAGGFLRHRHPAGHHVEEG 249 +K+K + ++ L LHQ+ I LQK++ G + D AGG R H G H+ +G Sbjct: 224 LKEKIAQLEEQIKLEELHQA-LISKLQKLKTGNETVTHPDTAGGLSRTPHWPGQHIPKG 281
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/70 (24%), Positives = 33/70 (47%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K+ F +G + + G R FGFV F A KAV +++G+ + V Sbjct: 206 RLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 ++ LFE +G++T++++PP+ V FA A KA KG ++ +L + A Sbjct: 500 LRKLFEPYGQITRLLMPPSGT-----IAIVEFARPDEAQKAFKGLAYRKVGDSILFLEKA 554
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 + + F G++ I +P + R F F+ + + A A+ E+ G+ + V++ Sbjct: 22 LNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSELCGRTIRVNL 81 Query: 499 AKPLSDKKPDHSFK 458 AKP+ K + SFK Sbjct: 82 AKPVRVK--EDSFK 93
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 32.7 bits (73), Expect = 1.0 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +FE +G V + +P + R F FV F ++ A A+ + +DG+ L V M Sbjct: 30 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 89 Query: 499 AK 494 A+ Sbjct: 90 AR 91
>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2| Length = 1484 Score = 32.7 bits (73), Expect = 1.0 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 14/77 (18%) Frame = +1 Query: 148 HLQKMQGKGKTSRADNAGGFLRHRHPAG-------------HHVEEGVEAAFHQVVAEHS 288 H Q +G S ++GGF R+R P G HH + A Q ++ Sbjct: 1174 HPQHFPPRGFQSNHPHSGGFPRYRPPQGMRYSYHPPPQPSYHHYQRTPYYACPQSFSDWQ 1233 Query: 289 QGGH-QGAPSEPSSSQP 336 + H QG+PS P +SQP Sbjct: 1234 RPLHPQGSPSGPPASQP 1250
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 32.7 bits (73), Expect = 1.0 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +FE +G V + +P + R F FV F ++ A A+ + +DG+ L V M Sbjct: 29 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88 Query: 499 AK 494 A+ Sbjct: 89 AR 90
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 32.7 bits (73), Expect = 1.0 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +FE +G V + +P + R F FV F ++ A A+ + +DG+ L V M Sbjct: 29 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88 Query: 499 AK 494 A+ Sbjct: 89 AR 90
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 32.7 bits (73), Expect = 1.0 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +FE +G V + +P + R F FV F ++ A A+ + +DG+ L V M Sbjct: 29 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88 Query: 499 AK 494 A+ Sbjct: 89 AR 90
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 32.7 bits (73), Expect = 1.0 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +FE +G V + +P + R F FV F ++ A A+ + +DG+ L V M Sbjct: 29 LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88 Query: 499 AK 494 A+ Sbjct: 89 AR 90
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 32.7 bits (73), Expect = 1.0 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = -1 Query: 664 FEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 FE +G + V+ ++G + +G+V F +A AV + EIDG+++ + ++ P Sbjct: 283 FEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNP 341
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -1 Query: 664 FEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLS 485 F G +T L + G + FGFV F+ A+ AVK G+ L V++A+ Sbjct: 324 FSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKE 383 Query: 484 DKK 476 D+K Sbjct: 384 DRK 386
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -1 Query: 664 FEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPL 488 F G V K ++ ++G KR FGFV+F +A KA + + I G +EV A P Sbjct: 118 FSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAV-VKFHPIQGHRVEVKKAVPK 176 Query: 487 SD 482 D Sbjct: 177 ED 178
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K LF+ GE+ + +PP K GFV F R SA A+ + Y + + +S Sbjct: 318 ELKYLFQNFGEIVYVKIPPGKG-----CGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSW 372 Query: 499 AK 494 + Sbjct: 373 GR 374
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -1 Query: 667 LFEVHGEV-TKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 LF G + T ++ K G+ +GFV F + AL+A+ + + ++VS A+P Sbjct: 97 LFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARP 156 Query: 490 LSDKKPD 470 ++ D Sbjct: 157 GGEQLRD 163
>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) Length = 273 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPL 488 R F FV F E A+ A+ + EI G+ + V++A+P+ Sbjct: 11 RGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRVNVARPV 49
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = -1 Query: 646 VTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDKKPDH 467 +T + + + G R FGF+ + A AV+ I+ +EVSMAK +D + Sbjct: 43 ITDVKILRDRNGESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQ 102 Query: 466 SFK 458 K Sbjct: 103 PMK 105
>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1| Length = 833 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 +K L ++ E+T + + K G R F F+ F A KA++ K ++ +EV A Sbjct: 22 LKSLPQLDAEITDVSVAKTKEGVSRRFAFIGFKNEEDADKAIRYLNKSYVETSRIEVHRA 81 Score = 31.2 bits (69), Expect = 3.0 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -1 Query: 598 FGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 FGFV F +++SA+ A+ + +DG LE+ ++ Sbjct: 667 FGFVEFKDKASAVAAMHAMNGFVLDGHKLEIKLS 700
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/67 (29%), Positives = 30/67 (44%) Frame = -1 Query: 658 VHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSDK 479 V G +T + + + G R F F+ + AL AV + I +EV MAK +D Sbjct: 35 VDGLITDLRILKNREGKSRRFAFIGYKNEQDALDAVNYFDGSFIYTSKIEVDMAKSFADP 94 Query: 478 KPDHSFK 458 + S K Sbjct: 95 RVPKSMK 101
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = -1 Query: 634 VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 ++ ++G R FGFV F + + A++ E+DG+V+ V+ A+ Sbjct: 37 IINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 32.0 bits (71), Expect = 1.8 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 664 FEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 F +G+V ++ + G R FGFV F + + A++G ++DG+ + V+ A+ Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)| (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) Length = 256 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++LF G + K + ++G VHF ++ ALKA+K +DG+ + + + Sbjct: 121 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 179
>RBM4_RABIT (Q9BDY9) RNA-binding protein 4 (RNA-binding motif protein 4) (Lark| homolog) Length = 359 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>RBM4B_HUMAN (Q9BQ04) RNA-binding protein 4B (RNA-binding motif protein 4B)| (RNA-binding protein 30) (RNA-binding motif protein 30) Length = 359 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++LF G + K + ++G VHF ++ ALKA+K +DG+ + + + Sbjct: 120 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL 178
>RBM4B_RAT (Q64LC9) RNA-binding protein 4B (RNA-binding motif protein 4B)| (RNA-binding protein 30) (RNA-binding motif protein 30) (Zinc-responsive protein ZD7) Length = 357 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>RBM4B_MOUSE (Q8VE92) RNA-binding protein 4B (RNA-binding motif protein 4B)| (RNA-binding protein 30) (RNA-binding motif protein 30) Length = 357 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>RBM4_MOUSE (Q8C7Q4) RNA-binding protein 4 (RNA-binding motif protein 4)| (RNA-binding motif protein 4a) (Lark homolog) (mLark) Length = 361 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>RBM4_BOVIN (Q3MHX3) RNA-binding protein 4 (RNA-binding motif protein 4)| (RNA-binding motif protein 4a) Length = 362 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +F +G+++++V+ + + R FGFV F A A+ +DG+ + V Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 Query: 499 AKPLSDKK 476 A SD + Sbjct: 82 AGKSSDNR 89
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +F +G+++++V+ + + R FGFV F A A+ +DG+ + V Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 Query: 499 AKPLSDKK 476 A SD + Sbjct: 82 AGKSSDNR 89
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +F +G+++++V+ + + R FGFV F A A+ +DG+ + V Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 Query: 499 AKPLSDKK 476 A SD + Sbjct: 82 AGKSSDNR 89
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +F +G+++++V+ + + R FGFV F A A+ +DG+ + V Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 Query: 499 AKPLSDKK 476 A SD + Sbjct: 82 AGKSSDNR 89
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ +F +G+++++V+ + + R FGFV F A A+ +DG+ + V Sbjct: 22 LEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 Query: 499 AKPLSDKK 476 A SD + Sbjct: 82 AGKSSDNR 89
>RBM4_HUMAN (Q9BWF3) RNA-binding protein 4 (RNA-binding motif protein 4)| (RNA-binding motif protein 4a) (Lark homolog) (hLark) Length = 364 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/62 (24%), Positives = 35/62 (56%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++ LFE +G+V + + +++GFVH ++++A A++ Y++ G + V Sbjct: 17 EIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69 Query: 499 AK 494 +K Sbjct: 70 SK 71
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/61 (27%), Positives = 32/61 (52%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 K+K +F +G V + +P + G F FV + S+ A++ ++ +IDG+ + V Sbjct: 163 KLKKIFGRYGTVVEATIPRKRDGKLCGFAFVTMKKISNCRIALENTKDLKIDGRKVAVDF 222 Query: 499 A 497 A Sbjct: 223 A 223 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++ D F + V+ R FGFV FA +A+ + K + +G +L V + Sbjct: 41 QLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKARKTKFNGHILRVDI 100 Query: 499 AK 494 AK Sbjct: 101 AK 102
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -1 Query: 661 EVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSD 482 +V ++ + L + G R F F+ F + A V +D +EVSMAK +D Sbjct: 34 DVQSYLSDVKLMKNRDGESRRFAFIGFRDEEDAFDCVNYFNGTFVDTSKIEVSMAKSFAD 93 Query: 481 KK 476 + Sbjct: 94 PR 95
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/70 (22%), Positives = 34/70 (48%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 ++K++F +G + + G + FGFV F A KAV +++G+ + V Sbjct: 206 RLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGR 265 Query: 499 AKPLSDKKPD 470 A+ +++ + Sbjct: 266 AQKKVERQTE 275
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSM 500 +++LF G+V + V+ +G + FGFV + KA+ ++DG+ + VS Sbjct: 273 LENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSE 332 Query: 499 AK 494 A+ Sbjct: 333 AE 334 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 ++ LFE G V + V+ G R FGFV + + A + YE +G+ L V+ Sbjct: 114 QLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN 173 Query: 502 MAKP 491 P Sbjct: 174 AGPP 177
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/77 (28%), Positives = 27/77 (35%), Gaps = 6/77 (7%) Frame = +1 Query: 214 HRHPAGHHVEEGVEAAFHQVVAEHSQGGHQGA------PSEPSSSQPVLVLYHIS*AG*I 375 H HP HH E E H EH + H+ P P +H+ Sbjct: 63 HHHPEEHH-EPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHL------ 115 Query: 376 QGHHHRHHMGLPCSHHK 426 GHHH HH HH+ Sbjct: 116 -GHHHHHHHAAHHHHHE 131 Score = 31.2 bits (69), Expect = 3.0 Identities = 20/74 (27%), Positives = 23/74 (31%) Frame = +1 Query: 202 GFLRHRHPAGHHVEEGVEAAFHQVVAEHSQGGHQGAPSEPSSSQPVLVLYHIS*AG*IQG 381 G H H A HH E H A H + P +H+ Sbjct: 116 GHHHHHHHAAHH-HHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAP 174 Query: 382 HHHRHHMGLPCSHH 423 HHH HH P HH Sbjct: 175 HHHHHHHHAPHHHH 188 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/70 (30%), Positives = 23/70 (32%) Frame = +1 Query: 214 HRHPAGHHVEEGVEAAFHQVVAEHSQGGHQGAPSEPSSSQPVLVLYHIS*AG*IQGHHHR 393 H HP HH G +H A H H AP +H HHH Sbjct: 156 HHHPWFHHHHLG----YHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHA---PHHHH 208 Query: 394 HHMGLPCSHH 423 HH P HH Sbjct: 209 HHHHAPHHHH 218
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFA---ERSSALKAVK 548 ++DLF G++ + LP R FGFV ++ E SA++A+K Sbjct: 735 IRDLFSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEALK 780
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -1 Query: 664 FEVHGEVTKI-VLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 F GEV ++ + G R FGFV F + S A+ E+DG+ + V+ A+ Sbjct: 26 FSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 31.2 bits (69), Expect = 3.0 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEI-DGQVLEVSMAKP 491 + F FVH E + AL+A++ +E+ G+ L V M++P Sbjct: 35 KQFAFVHMRENAGALRAIEALHGHELRPGRALVVEMSRP 73
>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)| (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein) Length = 669 Score = 31.2 bits (69), Expect = 3.0 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEI-DGQVLEVSMAKP 491 + F FVH E + AL+A++ +E+ G+ L V M++P Sbjct: 35 KQFAFVHMRENAGALRAIEALHGHELRPGRALVVEMSRP 73
>HM8_XENLA (P14837) Homeobox protein 8 (XlHbox-8)| Length = 271 Score = 30.8 bits (68), Expect = 4.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 319 PSSSQPVLVLYHIS*AG*IQGHHHRHHMGLPCSHHKV 429 P S +P++ H HHH HH G+P HH++ Sbjct: 68 PISEEPIVPHLHHH-----HYHHHHHHPGIPHPHHQM 99
>OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)| Length = 338 Score = 30.8 bits (68), Expect = 4.0 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 355 IS*AG*IQGHHHRHHMGLPCSHH 423 +S A + GHHH HH+G HH Sbjct: 262 LSTAAAVSGHHHPHHIGQSSGHH 284
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 ++K LF GE+ L K G +GFV++ + A KA+ + + ++VS Sbjct: 54 ELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS 113 Query: 502 MAKPLS 485 A+P S Sbjct: 114 YARPSS 119
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 ++K LF GE+ L K G +GFV++ + A KA+ + + ++VS Sbjct: 54 ELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS 113 Query: 502 MAKPLS 485 A+P S Sbjct: 114 YARPSS 119
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 ++K LF GE+ L K G +GFV++ + A KA+ + + ++VS Sbjct: 54 ELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS 113 Query: 502 MAKPLS 485 A+P S Sbjct: 114 YARPSS 119
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVS 503 ++K LF GE+ L K G +GFV++ + A KA+ + + ++VS Sbjct: 54 ELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS 113 Query: 502 MAKPLS 485 A+P S Sbjct: 114 YARPSS 119
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 30.8 bits (68), Expect = 4.0 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHK-RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEV 506 +K +FE G + L + H + +GF+ +A + + +A+ +++ GQ+L V Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRV 300
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 30.8 bits (68), Expect = 4.0 Identities = 15/60 (25%), Positives = 30/60 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 ++ F +G V ++ + +AG + +GFV F + A K ++ +EK + L + A Sbjct: 49 LRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPA 108
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 30.8 bits (68), Expect = 4.0 Identities = 15/60 (25%), Positives = 30/60 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 ++ F +G V ++ + +AG + +GFV F + A K ++ +EK + L + A Sbjct: 49 LRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPA 108
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -1 Query: 613 GHKRDFGFVHFAERSSALKAVKGSEKYEID-GQVLEVSMAK 494 G R +GFV F A KA+ ++ Y++ QVL VS A+ Sbjct: 597 GSSRGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQ 637
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/60 (23%), Positives = 30/60 (50%) Frame = -1 Query: 676 VKDLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 ++ F +G V ++ + +AG + +GF+ F + A K ++ +EK + L + A Sbjct: 49 LRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPA 108
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPP--AKAGHKRDFGFVHFAERSSALKA 554 ++++LF GE+ + LP G R FGFV F + A KA Sbjct: 839 EIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 882 Score = 29.6 bits (65), Expect = 8.8 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -1 Query: 598 FGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAK 494 FGFV + + A KA+K + + +DG LEV +++ Sbjct: 768 FGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 802
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 30.4 bits (67), Expect = 5.2 Identities = 29/107 (27%), Positives = 35/107 (32%), Gaps = 5/107 (4%) Frame = +1 Query: 121 ALHQS*QIHHLQKMQGKGKTSRADNAGGFLRHRHPAG-----HHVEEGVEAAFHQVVAEH 285 A H S HH G + + PAG HH G + H Sbjct: 224 AHHGSDLSHHSASESTSGHRGQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEA-DHH 282 Query: 286 SQGGHQGAPSEPSSSQPVLVLYHIS*AG*IQGHHHRHHMGLPCSHHK 426 S H PS P P +H Q HHH H + LP HH+ Sbjct: 283 STTEHHAPPSHPQQQHP----HH-------QQHHHPHLL-LPQQHHQ 317
>HNRPC_XENLA (P19600) Heterogeneous nuclear ribonucleoprotein C (hnRNP core| protein C) Length = 282 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 + F FV F+ +A AV G + I GQVL++++A Sbjct: 51 KGFAFVQFSNERTARTAVAGEDGRMIAGQVLDINLA 86
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = -1 Query: 679 KVKDLFEVHGEVTKIVLPPAK--AGH--KRDFGFVHFAERSSALKAVKGSEKYEIDGQVL 512 K+K++F G V + K AG FGFV + + A KA+K + + +DG L Sbjct: 745 KLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKL 804 Query: 511 EVSMAK 494 EV +++ Sbjct: 805 EVRISE 810
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 30.0 bits (66), Expect = 6.7 Identities = 19/78 (24%), Positives = 30/78 (38%) Frame = +1 Query: 226 AGHHVEEGVEAAFHQVVAEHSQGGHQGAPSEPSSSQPVLVLYHIS*AG*IQGHHHRHHMG 405 AG AA +A S GG +G+P++ Q + + HHH H Sbjct: 66 AGAAAASAAAAAAAAALAAASSGGGRGSPTDSEREQSL-----------VAQHHHHHQQQ 114 Query: 406 LPCSHHKVEEDS*ELLQA 459 HH+ ++ + QA Sbjct: 115 QQHHHHQQQQQQQQHQQA 132
>RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 265 Score = 30.0 bits (66), Expect = 6.7 Identities = 18/69 (26%), Positives = 30/69 (43%) Frame = -1 Query: 670 DLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 +LF G V K+ +P K G + F FV+F S A+ ++ G+ +++ Sbjct: 28 ELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNLLNGIKLFGRPIKIQFRSG 87 Query: 490 LSDKKPDHS 464 S D S Sbjct: 88 SSHASQDAS 96
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 30.0 bits (66), Expect = 6.7 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = -1 Query: 673 KDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 K LF G++ L K G +GFV++++ + A KA+ ++ + ++VS A Sbjct: 56 KSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115 Query: 496 KPLS 485 +P S Sbjct: 116 RPSS 119
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 30.0 bits (66), Expect = 6.7 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = -1 Query: 673 KDLFEVHGEVTKIVLPPAK-AGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMA 497 K LF G++ L K G +GFV++++ + A KA+ ++ + ++VS A Sbjct: 56 KSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115 Query: 496 KPLS 485 +P S Sbjct: 116 RPSS 119
>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 30.0 bits (66), Expect = 6.7 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEI-DGQVLEVSMAKP 491 + F FVH E + A++A++ +E+ G+ L V M++P Sbjct: 35 KQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEMSRP 73
>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 30.0 bits (66), Expect = 6.7 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -1 Query: 604 RDFGFVHFAERSSALKAVKGSEKYEI-DGQVLEVSMAKP 491 + F FVH E + A++A++ +E+ G+ L V M++P Sbjct: 35 KQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEMSRP 73
>DSX_DROME (P23023) Protein doublesex| Length = 549 Score = 29.6 bits (65), Expect = 8.8 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 21/78 (26%) Frame = +1 Query: 232 HHVEEGVEAAFHQVVAEHSQGGHQ-----------------GAPSEPSSSQPVLVLYHI- 357 HHV H V A H+ GGH APS P+S H+ Sbjct: 121 HHVAAPAHVHAHHVHAHHAHGGHHSHHGHVLHHQQAAAAAAAAPSAPAS--------HLG 172 Query: 358 ---S*AG*IQGHHHRHHM 402 + A I GH H HH+ Sbjct: 173 GSSTAASSIHGHAHAHHV 190
>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 266 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/69 (26%), Positives = 30/69 (43%) Frame = -1 Query: 670 DLFEVHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKP 491 +LF G V K+ +P K G + F FV+F S A+ ++ G+ +++ Sbjct: 28 ELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQFRSG 87 Query: 490 LSDKKPDHS 464 S D S Sbjct: 88 SSHAPQDVS 96
>MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specific homeobox)| Length = 303 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%) Frame = +1 Query: 232 HHVEEGVEAAFHQVVAEHSQGGHQGAPSEPSSSQPVLVLYHIS*AG*IQGHHHR-HHMGL 408 H +G+ +A H + H P +SS ++ + + G HHR HH Sbjct: 13 HATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMFASQHHRGHHHHH 72 Query: 409 PCSHHKVEEDS*ELLQA 459 HH ++ + LQ+ Sbjct: 73 HHHHHHHQQQQHQALQS 89
>MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)| Length = 303 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%) Frame = +1 Query: 232 HHVEEGVEAAFHQVVAEHSQGGHQGAPSEPSSSQPVLVLYHIS*AG*IQGHHHR-HHMGL 408 H +G+ +A H + H P +SS ++ + + G HHR HH Sbjct: 13 HATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEEGMFASQHHRGHHHHH 72 Query: 409 PCSHHKVEEDS*ELLQA 459 HH ++ + LQ+ Sbjct: 73 HHHHHHHQQQQHQALQS 89
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 29.6 bits (65), Expect = 8.8 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -1 Query: 649 EVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSEKYEIDGQVLEVSMAKPLSD 482 ++T + + A+ G R FGFV F +A AVK + I+ + V++A +D Sbjct: 37 DITDVKVVRARDGKTRRFGFVGFRSDETAEAAVKYFDTSFINSTKISVAVAMTFTD 92
>PSBB_EUGGR (P14813) Photosystem II P680 chlorophyll A apoprotein (CP-47| protein) Length = 508 Score = 29.6 bits (65), Expect = 8.8 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 299 WPPWLCSATTWWNAASTPSSTW*PAGWRW 213 W ++ S T W+ +ASTP + P ++W Sbjct: 247 WSAFVVSGTMWYGSASTPIELFGPTRYQW 275 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,630,045 Number of Sequences: 219361 Number of extensions: 1963180 Number of successful extensions: 6816 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 6228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6705 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
