| Clone Name | rbaal10n21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precurs... | 209 | 6e-54 | 2 | ATS7_HUMAN (Q9UKP4) ADAMTS-7 precursor (EC 3.4.24.-) (A disinteg... | 34 | 0.48 | 3 | ATP9B_HUMAN (O43861) Probable phospholipid-transporting ATPase I... | 30 | 9.1 |
|---|
>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC| 1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell death 1) (Lethal leaf-spot 1 homolog) (Lls1) Length = 537 Score = 209 bits (532), Expect = 6e-54 Identities = 102/168 (60%), Positives = 129/168 (76%), Gaps = 2/168 (1%) Frame = -3 Query: 688 NLVYDGDMIVLQGQEKVFLSASKES-SADVNQQYTKLTFTPTQADRFVLAFRAWLRKFGN 512 NLVYDGDMIVLQGQEKVFL+ S ES DVN+QYTKLTFTPTQADRFVLAFR WLR+ G Sbjct: 370 NLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGK 429 Query: 511 SQPDWYGS-PTQDALPSTVLSKREMLDRYEQHTLKCSSCRGAHKAFQTLQKVFMGATVVF 335 SQP+W+GS P+ LPSTVL+KR+MLDR++QHT CSSC+GA+ +FQ L+K +GATV + Sbjct: 430 SQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFW 489 Query: 334 GVTSGIPADVQXXXXXXXXXXXXXXXAYVFYDRQKHFVFVDYVHADID 191 T+G+P+DVQ AY ++++K+FVF DYVH++I+ Sbjct: 490 AATAGVPSDVQIRLVLAGLSLISAASAYALHEQEKNFVFRDYVHSEIE 537
>ATS7_HUMAN (Q9UKP4) ADAMTS-7 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 7) (ADAM-TS 7) (ADAM-TS7) Length = 997 Score = 33.9 bits (76), Expect = 0.48 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +2 Query: 206 HVVYKHEMLLAVVEDIGQSSADQSAGAEQYPELNIRRDPGCHAEHHRRP 352 HVVYK + + + G SSA + G + YPEL RR+ + RRP Sbjct: 181 HVVYKRQAPERLAQR-GDSSAPSTCGVQVYPELESRRERWEQRQQWRRP 228
>ATP9B_HUMAN (O43861) Probable phospholipid-transporting ATPase IIB (EC 3.6.3.1)| Length = 1095 Score = 29.6 bits (65), Expect = 9.1 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +3 Query: 366 CRVWKALCAPLQDEHLSVCCSYLSSISRFERTVEGNASWVGLP 494 C WK LC CC +L +I R ++ ++ W+G P Sbjct: 37 CDGWKFLCTS--------CCGWLINICRRKKELKARTVWLGCP 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,421,037 Number of Sequences: 219361 Number of extensions: 1968968 Number of successful extensions: 5676 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5434 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5662 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)