>gb|BT009602.1| Triticum aestivum clone wre1n.pk0080.f8:fis, full insert mRNA
           sequence
          Length = 899

 Score =  412 bits (208), Expect = e-112
 Identities = 290/320 (90%), Gaps = 5/320 (1%)
 Strand = Plus / Minus

                                                                       
Query: 19  tgcattcgggcatgcatgtggacaggtncacaagaactcaaaacaatgagctcccattcc 78
           |||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| 
Sbjct: 745 tgcattcgggcatgtatgcggacaggtacacaagaactcaaaacagtgagctcccattct 686

                                                                       
Query: 79  attctgtcgcacgttctactggctatggncacttgtttncatcagacatgactgagagct 138
           ||||||||||||| |||| ||||||||| ||||||||| || | ||||     |||||||
Sbjct: 685 attctgtcgcacgctctattggctatggacacttgttttcagctgaca-----gagagct 631

                                                                       
Query: 139 tgctgcatcctcatctgctgaaatctgcattctcccttcactagtcgatgggcacttcca 198
           |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 630 tgctgcatccccatctgctgaaatctgcatccgcccttcactagtcgatgggcacttcca 571

                                                                       
Query: 199 cctncattttcaggccagggtggtcgatgatcgnnacaaaatnttctaatgatagagtgg 258
           ||| ||| |||||||||| |||| |||||||||  ||||||| |||||||||||||||||
Sbjct: 570 cctccatcttcaggccagtgtggccgatgatcgtcacaaaatcttctaatgatagagtgg 511

                                                                       
Query: 259 aatcccgtgtgtacccagcttctttcaacacctttgttagtacttgctctctttgttgct 318
           |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 510 aatcccgtgtatacccagcttcttccaacacctttgttagtacttgctctctttgtttct 451

                               
Query: 319 ntgacatggatgagcccgtt 338
            |||||||||||||||||||
Sbjct: 450 ctgacatggatgagcccgtt 431

>dbj|AK106976.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H02, full
            insert sequence
          Length = 2604

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 111/139 (79%)
 Strand = Plus / Minus

                                                                        
Query: 177  cactagtcgatgggcacttccacctncattttcaggccagggtggtcgatgatcgnnaca 236
            |||||||| || ||||||||||||| ||| || |||||||| || || || |||     |
Sbjct: 2359 cactagtcaataggcacttccacctccatctttaggccaggatgatctataatcctggta 2300

                                                                        
Query: 237  aaatnttctaatgatagagtggaatcccgtgtgtacccagcttctttcaacacctttgtt 296
            |||| ||| || || || ||| |||||| |||||| |||||||||| ||  || ||||||
Sbjct: 2299 aaatcttccaaagaaagcgtgcaatcccttgtgtatccagcttcttccagtacatttgtt 2240

                               
Query: 297  agtacttgctctctttgtt 315
            | |||| ||||||||||||
Sbjct: 2239 attactcgctctctttgtt 2221

>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence
          Length = 201182

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 63     aatgagctcccattccattctg 84
              ||||||||||||||||||||||
Sbjct: 182679 aatgagctcccattccattctg 182658

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 177      cactagtcgatgggcacttccacctncattttcaggccagg 217
                |||||||| || ||||||||||||| ||| || ||||||||
Sbjct: 34225791 cactagtcaataggcacttccacctccatctttaggccagg 34225831

>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0032L17
          Length = 165808

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 177    cactagtcgatgggcacttccacctncattttcaggccagg 217
              |||||||| || ||||||||||||| ||| || ||||||||
Sbjct: 153305 cactagtcaataggcacttccacctccatctttaggccagg 153345

>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689B12
          Length = 154745

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 177   cactagtcgatgggcacttccacctncattttcaggccagg 217
             |||||||| || ||||||||||||| ||| || ||||||||
Sbjct: 61064 cactagtcaataggcacttccacctccatctttaggccagg 61104

>ref|XM_533013.2| PREDICTED: Canis familiaris similar to Transcription intermediary
            factor 1-gamma (TIF1-gamma) (RET-fused gene 7 protein)
            (Rfg7 protein) (Tripartite motif protein 33) (LOC475804),
            mRNA
          Length = 3750

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 138  ttgctgcatcctcatctgctg 158
            |||||||||||||||||||||
Sbjct: 1632 ttgctgcatcctcatctgctg 1612

>emb|AL662907.11| Human DNA sequence from clone RP11-131M11 on chromosome 1 Contains
            the gene for a novel protein (FLJ10759, FLJ16558) and a
            CpG island, complete sequence
          Length = 64693

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 282  ttcaacacctttgttagtact 302
            |||||||||||||||||||||
Sbjct: 2606 ttcaacacctttgttagtact 2626

>dbj|AK091566.1| Homo sapiens cDNA FLJ34247 fis, clone FCBBF4000192
          Length = 1360

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 282  ttcaacacctttgttagtact 302
            |||||||||||||||||||||
Sbjct: 1148 ttcaacacctttgttagtact 1128

>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185251

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 161   atctgcattctcccttcacta 181
             |||||||||||||||||||||
Sbjct: 35132 atctgcattctcccttcacta 35112

>gb|AC148053.3| Carollia perspicillata clone 594J14, complete sequence
          Length = 125844

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    acaagaactcaaaacaatgag 68
             |||||||||||||||||||||
Sbjct: 86880 acaagaactcaaaacaatgag 86860

>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 48      acaagaactcaaaacaatgag 68
               |||||||||||||||||||||
Sbjct: 1139098 acaagaactcaaaacaatgag 1139078

>ref|XM_612660.2| PREDICTED: Bos taurus similar to Transcription intermediary factor
            1-gamma (TIF1-gamma) (RET-fused gene 7 protein) (Rfg7
            protein) (Tripartite motif protein 33) (LOC533296), mRNA
          Length = 4076

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  tgctgcatcctcatctgctg 158
            ||||||||||||||||||||
Sbjct: 1982 tgctgcatcctcatctgctg 1963

>gb|AC011353.5| Homo sapiens chromosome 5 clone CTC-328A6, complete sequence
          Length = 143527

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acaatgagctcccattccat 80
             ||||||||||||||||||||
Sbjct: 13626 acaatgagctcccattccat 13645

>gb|AC083813.29| Homo sapiens 12q BAC RP11-304C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 216123

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 153    ctgctgaaatctgcattctcccttcact 180
              |||||||||| |||||||||||| ||||
Sbjct: 116416 ctgctgaaatttgcattctccctccact 116443

>gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, complete sequence
          Length = 195510

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     acaagaactcaaaacaatga 67
              ||||||||||||||||||||
Sbjct: 149106 acaagaactcaaaacaatga 149087

>gb|AC016748.3| Homo sapiens BAC clone RP11-494M7 from 2, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 153   ctgctgaaatctgcattctcccttcact 180
             |||||||||| |||||||||||| ||||
Sbjct: 38141 ctgctgaaatttgcattctccctccact 38168

>gb|AC004615.1|AC004615 Homo sapiens BAC clone GS1-405L21 from 5p15.2, complete sequence
          Length = 235141

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    acaagaactcaaaacaatga 67
             ||||||||||||||||||||
Sbjct: 19357 acaagaactcaaaacaatga 19376

>gb|AC156638.2| Mus musculus BAC clone RP24-255L24 from chromosome 9, complete sequence
          Length = 162792

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    tgcatgcattcgggcatgcatgtg 38
             |||||||||||| |||||||||||
Sbjct: 39160 tgcatgcattcgtgcatgcatgtg 39183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,416,744
Number of Sequences: 3902068
Number of extensions: 2416744
Number of successful extensions: 41837
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41793
Number of HSP's gapped (non-prelim): 44
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)