ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11c15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475399.1| Oryza sativa (japonica cultivar-group), predic... 220 3e-54
2dbj|AK061873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
3dbj|AK098945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
4ref|NM_190451.1| Oryza sativa (japonica cultivar-group), predic... 176 4e-41
5dbj|AK120744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
6dbj|AK060017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
7dbj|AK068980.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
8gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
9gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome... 159 1e-35
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
11gb|AY596588.1| Saccharum officinarum clone SCUTLR2030F03, comple... 143 6e-31
12gb|AY106423.1| Zea mays PCO101267 mRNA sequence 131 2e-27
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
14dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
15dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
16gb|BT016302.1| Zea mays clone Contig135 mRNA sequence 88 3e-14
17gb|AY109230.1| Zea mays PCO070603 mRNA sequence 88 3e-14
18ref|NM_114598.2| Arabidopsis thaliana unknown protein AT3G47300 ... 50 0.007
19gb|BT010507.1| Arabidopsis thaliana At3g47300 gene, complete cds 50 0.007
20emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BA... 50 0.007
21dbj|AK176362.1| Arabidopsis thaliana mRNA for putative protein, ... 50 0.007
22dbj|AK176038.1| Arabidopsis thaliana mRNA for putative protein, ... 50 0.007
23dbj|AK175455.1| Arabidopsis thaliana mRNA for putative protein, ... 50 0.007
24emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chro... 42 1.7
25gb|AY122161.1| Drosophila melanogaster LD22376 full insert cDNA 42 1.7
26ref|NM_131970.1| Drosophila melanogaster CG6903-RA (CG6903), mRNA 42 1.7
27emb|BX825283.1|CNS0A6EY Arabidopsis thaliana Full-length cDNA Co... 42 1.7
28gb|AC023701.4| Drosophila melanogaster X BAC RP98-29B16 (Roswell... 42 1.7
29gb|AC023695.4| Drosophila melanogaster X BAC RP98-25I9 (Roswell ... 42 1.7
30gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 ... 42 1.7
31gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosom... 40 6.6
32emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chro... 40 6.6
33gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete s... 40 6.6
34gb|DQ241776.1| Exidia uvapsassa isolate AFTOL-ID 461 internal tr... 40 6.6 
>ref|XM_475399.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score =  220 bits (111), Expect = 3e-54
 Identities = 191/218 (87%)
 Strand = Plus / Minus

                                                                       
Query: 274 ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 333
           |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 774 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 715

                                                                       
Query: 334 gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaaccaa 393
           |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||||
Sbjct: 714 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaaccaa 655

                                                                       
Query: 394 atctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaatt 453
           ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 654 atctccattgcagtaaacttcaaaggcaccagaactttgtaggaaagattgcgcaaaatt 595

                                                 
Query: 454 gccaaatagccaaattgtcgccatcgttccaaatctat 491
           |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 594 gccaaatagccagattgttgccatggttccaaatctat 557
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>dbj|AK061873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A06, full
           insert sequence
          Length = 1123

 Score =  220 bits (111), Expect = 3e-54
 Identities = 191/218 (87%)
 Strand = Plus / Minus

                                                                       
Query: 274 ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 333
           |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 853 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 794

                                                                       
Query: 334 gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaaccaa 393
           |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||||
Sbjct: 793 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaaccaa 734

                                                                       
Query: 394 atctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaatt 453
           ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 733 atctccattgcagtaaacttcaaaggcaccagaactttgtaggaaagattgcgcaaaatt 674

                                                 
Query: 454 gccaaatagccaaattgtcgccatcgttccaaatctat 491
           |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 673 gccaaatagccagattgttgccatggttccaaatctat 636
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>dbj|AK098945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050H09, full
           insert sequence
          Length = 1093

 Score =  220 bits (111), Expect = 3e-54
 Identities = 191/218 (87%)
 Strand = Plus / Minus

                                                                       
Query: 274 ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 333
           |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 865 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 806

                                                                       
Query: 334 gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaaccaa 393
           |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||||
Sbjct: 805 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaaccaa 746

                                                                       
Query: 394 atctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaatt 453
           ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 745 atctccattgcagtaaacttcaaaggcaccagaactttgtaggaaagattgcgcaaaatt 686

                                                 
Query: 454 gccaaatagccaaattgtcgccatcgttccaaatctat 491
           |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 685 gccaaatagccagattgttgccatggttccaaatctat 648
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>ref|NM_190451.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 699

 Score =  176 bits (89), Expect = 4e-41
 Identities = 169/196 (86%)
 Strand = Plus / Minus

                                                                       
Query: 296 tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
           |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 677 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 618

                                                                       
Query: 356 ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 415
           || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 617 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 558

                                                                       
Query: 416 aaggcaccanaactttgtaggaaagactgggcaaaattgccaaatagccaaattgtcgcc 475
           ||||||||| |||||||||| || |||||||| ||||||||||| ||||| ||||| |||
Sbjct: 557 aaggcaccagaactttgtagaaatgactgggcgaaattgccaaacagccagattgttgcc 498

                           
Query: 476 atcgttccaaatctat 491
           || |||||||||||||
Sbjct: 497 attgttccaaatctat 482
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>dbj|AK120744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G13, full
            insert sequence
          Length = 1951

 Score =  176 bits (89), Expect = 4e-41
 Identities = 169/196 (86%)
 Strand = Plus / Minus

                                                                        
Query: 296  tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
            |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 1775 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 1716

                                                                        
Query: 356  ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 415
            || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 1715 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 1656

                                                                        
Query: 416  aaggcaccanaactttgtaggaaagactgggcaaaattgccaaatagccaaattgtcgcc 475
            ||||||||| |||||||||| || |||||||| ||||||||||| ||||| ||||| |||
Sbjct: 1655 aaggcaccagaactttgtagaaatgactgggcgaaattgccaaacagccagattgttgcc 1596

                            
Query: 476  atcgttccaaatctat 491
            || |||||||||||||
Sbjct: 1595 attgttccaaatctat 1580
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>dbj|AK060017.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G02, full
           insert sequence
          Length = 1076

 Score =  176 bits (89), Expect = 4e-41
 Identities = 169/196 (86%)
 Strand = Plus / Minus

                                                                       
Query: 296 tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
           |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 760 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 701

                                                                       
Query: 356 ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 415
           || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 700 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 641

                                                                       
Query: 416 aaggcaccanaactttgtaggaaagactgggcaaaattgccaaatagccaaattgtcgcc 475
           ||||||||| |||||||||| || |||||||| ||||||||||| ||||| ||||| |||
Sbjct: 640 aaggcaccagaactttgtagaaatgactgggcgaaattgccaaacagccagattgttgcc 581

                           
Query: 476 atcgttccaaatctat 491
           || |||||||||||||
Sbjct: 580 attgttccaaatctat 565
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>dbj|AK068980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002I10, full
           insert sequence
          Length = 952

 Score =  168 bits (85), Expect = 1e-38
 Identities = 168/196 (85%)
 Strand = Plus / Minus

                                                                       
Query: 296 tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
           |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 636 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 577

                                                                       
Query: 356 ctagggaacctctgttcggctaacttcgagaaaaccaaatctccattgcagtaaacttca 415
           || || || |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 576 ctgggaaatctctgttcggataattttgagaaaaccaattgtccattgcagtaaacttca 517

                                                                       
Query: 416 aaggcaccanaactttgtaggaaagactgggcaaaattgccaaatagccaaattgtcgcc 475
           ||| ||||| |||||||||| || |||||||| ||||||||||| ||||| ||||| |||
Sbjct: 516 aagacaccagaactttgtagaaatgactgggcgaaattgccaaacagccagattgttgcc 457

                           
Query: 476 atcgttccaaatctat 491
           || |||||||||||||
Sbjct: 456 attgttccaaatctat 441
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>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21,
              complete sequence
          Length = 153214

 Score =  159 bits (80), Expect = 1e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                          
Query: 389    accaaatctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggca 448
              |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||
Sbjct: 145116 accaaatctccattgcagtaaacttcaaaggcaccagaactttgtaggaaagattgcgca 145057

                                                         
Query: 449    aaattgccaaatagccaaattgtcgccatcgttccaaatctat 491
              ||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 145056 aaattgccaaatagccagattgttgccatggttccaaatctat 145014



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                          
Query: 274    ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 333
              |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 145522 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 145463

                                                                        
Query: 334    gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaacc 391
              |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 145462 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaacc 145405
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>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08,
             complete sequence
          Length = 141535

 Score =  159 bits (80), Expect = 1e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                         
Query: 389   accaaatctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggca 448
             |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||
Sbjct: 99367 accaaatctccattgcagtaaacttcaaaggcaccagaactttgtaggaaagattgcgca 99308

                                                        
Query: 449   aaattgccaaatagccaaattgtcgccatcgttccaaatctat 491
             ||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 99307 aaattgccaaatagccagattgttgccatggttccaaatctat 99265



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                         
Query: 274   ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 333
             |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 99773 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 99714

                                                                       
Query: 334   gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaacc 391
             |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 99713 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaacc 99656
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  159 bits (80), Expect = 1e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                            
Query: 389      accaaatctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggca 448
                |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||
Sbjct: 22789917 accaaatctccattgcagtaaacttcaaaggcaccagaactttgtaggaaagattgcgca 22789858

                                                           
Query: 449      aaattgccaaatagccaaattgtcgccatcgttccaaatctat 491
                ||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 22789857 aaattgccaaatagccagattgttgccatggttccaaatctat 22789815



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                            
Query: 274      ctaagacaaggcgtttcccatgtttttcccgaatggagaagatggcagtctgctgccgat 333
                |||||||||||  |||||||  |||||||| |   |||||  ||| | |||||||  |||
Sbjct: 22790323 ctaagacaaggattttcccacatttttcccaaccagagaatctggtaatctgctgttgat 22790264

                                                                          
Query: 334      gagatcacgcagctcaaactcgctagggaacctctgttcggctaacttcgagaaaacc 391
                |||||| ||||| |||||||| |||||||||||||| || ||||| || |||||||||
Sbjct: 22790263 gagatcccgcagttcaaactcactagggaacctctgctcagctaattttgagaaaacc 22790206
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>gb|AY596588.1| Saccharum officinarum clone SCUTLR2030F03, complete sequence
          Length = 1185

 Score =  143 bits (72), Expect = 6e-31
 Identities = 149/175 (85%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggcagtctgctgccgatgagatcacgcagctcaaactcgctagggaacctctgttcggct 376
           |||| ||||||||| || || || | || ||| ||||| |||||||||||||| || || 
Sbjct: 371 ggcaatctgctgccaataaggtccctcaactcgaactcactagggaacctctgctcagca 430

                                                                       
Query: 377 aacttcgagaaaaccaaatctccattgcagtaaacttcaaaggcaccanaactttgtagg 436
           |  || ||||| |||||||||||||||||||||||||||||||||||| | |||||||| 
Sbjct: 431 agttttgagaataccaaatctccattgcagtaaacttcaaaggcaccagagctttgtaga 490

                                                                  
Query: 437 aaagactgggcaaaattgccaaatagccaaattgtcgccatcgttccaaatctat 491
           || ||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 491 aaggactgagcaaagttgccaaatagccagattgttgccatggttccgaatctat 545
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>gb|AY106423.1| Zea mays PCO101267 mRNA sequence
          Length = 791

 Score =  131 bits (66), Expect = 2e-27
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                       
Query: 383 gagaaaaccaaatctccattgcagtaaacttcaaaggcaccanaactttgtaggaaagac 442
           ||||| |||||||||||||||||||||||||||||||||||| | |||||||| || |||
Sbjct: 768 gagaataccaaatctccattgcagtaaacttcaaaggcaccagagctttgtagaaaggac 709

                                                            
Query: 443 tgggcaaaattgccaaatagccaaattgtcgccatcgttccaaatctat 491
           || ||||| |||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 708 tgagcaaagttgccaaatagccagattgttgccatggttccgaatctat 660
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                            
Query: 397      tccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaattgcc 456
                |||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||
Sbjct: 35604280 tccattgcagtaaacttcaaaggcaccagaactttgtagaaatgactgggcgaaattgcc 35604339

                                                   
Query: 457      aaatagccaaattgtcgccatcgttccaaatctat 491
                ||| ||||| ||||| ||||| |||||||||||||
Sbjct: 35604340 aaacagccagattgttgccattgttccaaatctat 35604374



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                            
Query: 296      tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
                |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 35603196 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 35603255

                                                    
Query: 356      ctagggaacctctgttcggctaacttcgagaaaacc 391
                || || || |||||||||| ||| || |||||||||
Sbjct: 35603256 ctgggaaatctctgttcggataattttgagaaaacc 35603291
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>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0446G04
          Length = 143515

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                          
Query: 397    tccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaattgcc 456
              |||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||
Sbjct: 134467 tccattgcagtaaacttcaaaggcaccagaactttgtagaaatgactgggcgaaattgcc 134526

                                                 
Query: 457    aaatagccaaattgtcgccatcgttccaaatctat 491
              ||| ||||| ||||| ||||| |||||||||||||
Sbjct: 134527 aaacagccagattgttgccattgttccaaatctat 134561



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                          
Query: 296    tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
              |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 133383 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 133442

                                                  
Query: 356    ctagggaacctctgttcggctaacttcgagaaaacc 391
              || || || |||||||||| ||| || |||||||||
Sbjct: 133443 ctgggaaatctctgttcggataattttgagaaaacc 133478
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>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0460C04
          Length = 189043

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                        
Query: 397  tccattgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaattgcc 456
            |||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||
Sbjct: 7617 tccattgcagtaaacttcaaaggcaccagaactttgtagaaatgactgggcgaaattgcc 7676

                                               
Query: 457  aaatagccaaattgtcgccatcgttccaaatctat 491
            ||| ||||| ||||| ||||| |||||||||||||
Sbjct: 7677 aaacagccagattgttgccattgttccaaatctat 7711



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                        
Query: 296  tttttcccgaatggagaagatggcagtctgctgccgatgagatcacgcagctcaaactcg 355
            |||||||||||| |||||  ||| |  ||| |||| ||||| || || ||||||||||||
Sbjct: 6533 tttttcccgaattgagaatctggtaacctgttgccaatgagctcccgtagctcaaactcg 6592

                                                
Query: 356  ctagggaacctctgttcggctaacttcgagaaaacc 391
            || || || |||||||||| ||| || |||||||||
Sbjct: 6593 ctgggaaatctctgttcggataattttgagaaaacc 6628
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>gb|BT016302.1| Zea mays clone Contig135 mRNA sequence
          Length = 902

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 401 ttgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaattgccaaat 460
           ||||| |||||||||||||||||| |||| ||||| || || ||||| ||||||||||| 
Sbjct: 538 ttgcaataaacttcaaaggcaccagaactctgtagaaatgaatgggcgaaattgccaaac 479

                                          
Query: 461 agccaaattgtcgccatcgttccaaatctat 491
           ||||| |||| |||||| || ||||||||||
Sbjct: 478 agccagattgacgccatggtcccaaatctat 448
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>gb|AY109230.1| Zea mays PCO070603 mRNA sequence
          Length = 1134

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 401 ttgcagtaaacttcaaaggcaccanaactttgtaggaaagactgggcaaaattgccaaat 460
           ||||| |||||||||||||||||| |||| ||||| || || ||||| ||||||||||| 
Sbjct: 722 ttgcaataaacttcaaaggcaccagaactctgtagaaatgaatgggcgaaattgccaaac 663

                                          
Query: 461 agccaaattgtcgccatcgttccaaatctat 491
           ||||| |||| |||||| || ||||||||||
Sbjct: 662 agccagattgacgccatggtcccaaatctat 632
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>ref|NM_114598.2| Arabidopsis thaliana unknown protein AT3G47300 mRNA, complete cds
          Length = 804

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 389 accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
           ||||| ||||||||||||  ||||||||| |||||| |||||||
Sbjct: 530 accaattctccattgcagctaacttcaaaagcaccagaactttg 487
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>gb|BT010507.1| Arabidopsis thaliana At3g47300 gene, complete cds
          Length = 630

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 389 accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
           ||||| ||||||||||||  ||||||||| |||||| |||||||
Sbjct: 530 accaattctccattgcagctaacttcaaaagcaccagaactttg 487
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>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8
          Length = 87224

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 389   accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
             ||||| ||||||||||||  ||||||||| |||||| |||||||
Sbjct: 28294 accaattctccattgcagctaacttcaaaagcaccagaactttg 28337
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>dbj|AK176362.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL24-06-L15
          Length = 945

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 389 accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
           ||||| ||||||||||||  ||||||||| |||||| |||||||
Sbjct: 593 accaattctccattgcagctaacttcaaaagcaccagaactttg 550
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>dbj|AK176038.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL22-76-I04
          Length = 884

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 389 accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
           ||||| ||||||||||||  ||||||||| |||||| |||||||
Sbjct: 598 accaattctccattgcagctaacttcaaaagcaccagaactttg 555
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>dbj|AK175455.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL21-88-D05
          Length = 836

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 389 accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
           ||||| ||||||||||||  ||||||||| |||||| |||||||
Sbjct: 567 accaattctccattgcagctaacttcaaaagcaccagaactttg 524
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>emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chromosome 1 Contains part
             of the FMN2 gene for formin 2, complete sequence
          Length = 127208

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   atggagaagatggcagtctgc 326
             |||||||||||||||||||||
Sbjct: 32329 atggagaagatggcagtctgc 32309
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>gb|AY122161.1| Drosophila melanogaster LD22376 full insert cDNA
          Length = 2104

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 450 aattgccaaatagccaaattg 470
           |||||||||||||||||||||
Sbjct: 208 aattgccaaatagccaaattg 188
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>ref|NM_131970.1| Drosophila melanogaster CG6903-RA (CG6903), mRNA
          Length = 2313

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 450 aattgccaaatagccaaattg 470
           |||||||||||||||||||||
Sbjct: 399 aattgccaaatagccaaattg 379
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>emb|BX825283.1|CNS0A6EY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL26ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 759

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 389 accaaatctccattgcagtaaacttcaaaggcaccanaactttg 432
           ||||| ||||||||||||   |||||||| |||||| |||||||
Sbjct: 499 accaattctccattgcagctcacttcaaaagcaccagaactttg 456
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>gb|AC023701.4| Drosophila melanogaster X BAC RP98-29B16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 198245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 450    aattgccaaatagccaaattg 470
              |||||||||||||||||||||
Sbjct: 142874 aattgccaaatagccaaattg 142894
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>gb|AC023695.4| Drosophila melanogaster X BAC RP98-25I9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 164761

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 450    aattgccaaatagccaaattg 470
              |||||||||||||||||||||
Sbjct: 151354 aattgccaaatagccaaattg 151334
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>gb|AE003432.5| Drosophila melanogaster chromosome X, section 16 of 74 of the complete
              sequence
          Length = 319328

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 450    aattgccaaatagccaaattg 470
              |||||||||||||||||||||
Sbjct: 218722 aattgccaaatagccaaattg 218702
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>gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosome 6, complete sequence
          Length = 143926

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   atctccattgcagtaaactt 413
             ||||||||||||||||||||
Sbjct: 49789 atctccattgcagtaaactt 49808
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>emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chromosome 17, complete
             sequence
          Length = 197841

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   aaattgccaaatagccaaat 468
             ||||||||||||||||||||
Sbjct: 49429 aaattgccaaatagccaaat 49410
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>gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete sequence
          Length = 191954

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   aaaattgccaaatagccaaa 467
             ||||||||||||||||||||
Sbjct: 53961 aaaattgccaaatagccaaa 53942
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>gb|DQ241776.1| Exidia uvapsassa isolate AFTOL-ID 461 internal transcribed spacer
          1, 5.8S ribosomal RNA gene, and internal transcribed
          spacer 2, complete sequence
          Length = 506

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 71 acaggtgtgaggtgttcatacagc 94
          ||||||||||||||||||| ||||
Sbjct: 72 acaggtgtgaggtgttcatgcagc 49


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,768,648
Number of Sequences: 3902068
Number of extensions: 4768648
Number of successful extensions: 63205
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63102
Number of HSP's gapped (non-prelim): 103
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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