No.
Definition
Score (bits)
E Value
1 ref|NM_197476.1| Oryza sativa (japonica cultivar-group) putative...
66
2e-07
2 gb|AF309379.1| Oryza sativa (japonica cultivar-group) clone S214...
66
2e-07
3 gb|AY271620.1| Oryza sativa (indica cultivar-group) tau class GS...
66
2e-07
4 gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno...
66
2e-07
5 gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno...
66
2e-07
6 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
66
2e-07
7 dbj|AK073944.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
2e-07
8 dbj|AK061304.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
2e-07
9 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
66
2e-07
10 ref|NM_197498.1| Oryza sativa (japonica cultivar-group) putative...
64
6e-07
11 dbj|AK109314.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
12 gb|AF244707.1|AF244707 Zea mays glutathione S-transferase GST 42...
60
1e-05
13 gb|AY107788.1| Zea mays PCO100973 mRNA sequence
60
1e-05
14 ref|NM_197485.1| Oryza sativa (japonica cultivar-group) putative...
58
4e-05
15 ref|NM_197474.1| Oryza sativa (japonica cultivar-group) putative...
58
4e-05
16 gb|AF402796.1| Oryza sativa (japonica cultivar-group) clone C110...
58
4e-05
17 ref|NM_197489.1| Oryza sativa (japonica cultivar-group) putative...
56
2e-04
18 gb|AF309380.1| Oryza sativa (japonica cultivar-group) clone C242...
56
2e-04
19 gb|AF244704.1|AF244704 Zea mays glutathione S-transferase GST 39...
56
2e-04
20 gb|AF244697.1|AF244697 Zea mays glutathione S-transferase GST 32...
56
2e-04
21 gb|AF244691.1|AF244691 Zea mays glutathione S-transferase GST 26...
56
2e-04
22 gb|AY104418.1| Zea mays PCO115418 mRNA sequence
56
2e-04
23 ref|NM_197475.1| Oryza sativa (japonica cultivar-group) putative...
54
6e-04
24 ref|NM_197462.1| Oryza sativa (japonica cultivar-group) putative...
54
6e-04
25 gb|AF402799.1| Oryza sativa (japonica cultivar-group) clone RICS...
54
6e-04
26 gb|AF309378.1| Oryza sativa (japonica cultivar-group) clone C121...
54
6e-04
27 gb|AY271619.1| Oryza sativa (indica cultivar-group) tau class GS...
54
6e-04
28 gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...
54
6e-04
29 dbj|AK103453.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
6e-04
30 dbj|AK063773.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
6e-04
31 ref|NM_197492.1| Oryza sativa (japonica cultivar-group) putative...
50
0.010
32 ref|NM_197484.1| Oryza sativa (japonica cultivar-group) putative...
50
0.010
33 ref|NM_197473.1| Oryza sativa (japonica cultivar-group) putative...
50
0.010
34 gb|AY389775.1| Hyacinthus orientalis glutathione-S transferase m...
50
0.010
35 gb|AF402805.1| Oryza sativa (japonica cultivar-group) clone RICS...
50
0.010
36 gb|AF402794.1| Oryza sativa (japonica cultivar-group) clone RICS...
50
0.010
37 dbj|AK108376.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
38 dbj|AK106212.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
39 dbj|AK103309.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
40 dbj|AK102196.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
41 dbj|AK060931.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
42 dbj|AK059882.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
43 ref|NM_197460.1| Oryza sativa (japonica cultivar-group) putative...
48
0.038
44 dbj|AK107435.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.038
45 ref|NM_197499.1| Oryza sativa (japonica cultivar-group) putative...
46
0.15
46 ref|NM_197497.1| Oryza sativa (japonica cultivar-group) putative...
46
0.15
47 ref|NM_197496.1| Oryza sativa (japonica cultivar-group) putative...
46
0.15
48 gb|AF402800.1| Oryza sativa (japonica cultivar-group) clone RICS...
46
0.15
49 dbj|AK105926.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
50 dbj|AK104213.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
51 dbj|AK098972.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
52 dbj|AK067361.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
53 ref|NM_197486.1| Oryza sativa (japonica cultivar-group) putative...
44
0.59
54 ref|NM_197443.1| Oryza sativa (japonica cultivar-group) putative...
44
0.59
55 gb|AF402802.1| Oryza sativa (japonica cultivar-group) clone S140...
44
0.59
56 gb|BT009350.1| Triticum aestivum clone wlm96.pk0012.f5:fis, full...
44
0.59
57 emb|AJ414701.1|TAE414701 Triticum aestivum mRNA for glutathione ...
44
0.59
58 gb|AF244701.1|AF244701 Zea mays glutathione S-transferase GST 36...
44
0.59
59 dbj|AK104795.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.59
60 dbj|AK104194.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.59
61 dbj|AK067309.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.59
62 ref|NM_197490.1| Oryza sativa (japonica cultivar-group) putative...
42
2.3
63 ref|NM_197480.1| Oryza sativa (japonica cultivar-group) putative...
42
2.3
64 ref|NM_197445.1| Oryza sativa (japonica cultivar-group) putative...
42
2.3
65 gb|AF402801.1| Oryza sativa (japonica cultivar-group) clone S140...
42
2.3
66 ref|XM_752924.1| Ustilago maydis 521 hypothetical protein (UM018...
42
2.3
67 emb|Z84486.1|HS528L19 Human DNA sequence from clone RP3-528L19 o...
42
2.3
68 emb|AJ010449.1|AMY010449 Alopecurus myosuroides mRNA for glutath...
42
2.3
69 emb|AJ010448.1|AMY010448 Alopecurus myosuroides mRNA for glutath...
42
2.3
70 emb|AL732511.6| Zebrafish DNA sequence from clone CH211-140G4 in...
42
2.3
71 gb|AC124043.2| Homo sapiens chromosome 3 clone RP11-143A18, comp...
42
2.3
72 gb|AF244692.1|AF244692 Zea mays glutathione S-transferase GST 27...
42
2.3
73 dbj|AK059726.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.3
74 gb|AY105389.1| Zea mays PCO061770 mRNA sequence
42
2.3
75 ref|XM_510687.1| PREDICTED: Pan troglodytes similar to high-mobi...
40
9.3
76 ref|XM_450661.1| Oryza sativa (japonica cultivar-group), mRNA
40
9.3
77 ref|XM_506655.1| PREDICTED Oryza sativa (japonica cultivar-group...
40
9.3
78 ref|NM_197493.1| Oryza sativa (japonica cultivar-group) putative...
40
9.3
79 ref|NM_192151.1| Oryza sativa (japonica cultivar-group), predic...
40
9.3
80 gb|AC102523.9| Mus musculus chromosome 15, clone RP24-184F9, com...
40
9.3
81 gb|BC021959.1| Homo sapiens high-mobility group 20A, mRNA (cDNA ...
40
9.3
82 gb|AF309377.1| Oryza sativa (japonica cultivar-group) clone C621...
40
9.3
83 ref|XM_803419.1| Trypanosoma cruzi strain CL Brener dispersed ge...
40
9.3
84 emb|CR714599.2|CNS0GEC3 Tetraodon nigroviridis full-length cDNA
40
9.3
85 ref|NM_018200.2| Homo sapiens high-mobility group 20A (HMG20A), ...
40
9.3
86 gb|BT009217.1| Triticum aestivum clone wle1n.pk0060.a11:fis, ful...
40
9.3
87 gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
40
9.3
88 emb|AL355737.1|IRO548013 Homo sapiens mRNA full length insert cD...
40
9.3
89 gb|BT007980.1| Synthetic construct Homo sapiens high-mobility gr...
40
9.3
90 gb|BT006716.1| Homo sapiens high-mobility group 20A mRNA, comple...
40
9.3
91 emb|CR769774.8| Zebrafish DNA sequence from clone DKEY-149I17 in...
40
9.3
92 emb|BX511108.6| Zebrafish DNA sequence from clone DKEY-18F15 in ...
40
9.3
93 gb|AF146222.1| Homo sapiens HMG domain protein HMGX1 (HMGX1) mRN...
40
9.3
94 dbj|AK001601.1| Homo sapiens cDNA FLJ10739 fis, clone NT2RP30014...
40
9.3
95 gb|DQ393784.1| Pseudomonas aeruginosa strain N2-1 class I integr...
40
9.3
96 gb|AC090984.5| Homo sapiens chromosome 15, clone RP11-500C12, co...
40
9.3
97 gb|AF312365.1|AF312365 Blattella germanica putative BSC1 sodium ...
40
9.3
98 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
99 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
100 dbj|AK223100.1| Homo sapiens mRNA for high-mobility group 20A va...
40
9.3
101 gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple...
40
9.3
102 gb|AF244705.1|AF244705 Zea mays glutathione S-transferase GST 40...
40
9.3
103 gb|AF244698.1|AF244698 Zea mays glutathione S-transferase GST 33...
40
9.3
104 dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
105 dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
106 dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
107 gb|AY891624.1| Synthetic construct Homo sapiens clone FLH110896....
40
9.3
108 gb|AY891623.1| Synthetic construct Homo sapiens clone FLH110895....
40
9.3
109 gb|AY889043.1| Synthetic construct Homo sapiens clone FLH110899....
40
9.3
110 gb|AY889042.1| Synthetic construct Homo sapiens clone FLH110898....
40
9.3
111 dbj|AK107032.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.3
112 dbj|AK103316.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.3
113 gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
40
9.3
114 emb|AL831714.14| Mouse DNA sequence from clone RP23-311D24 on ch...
40
9.3
>gb|AC091680.7 | Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
sequence
Length = 148611
Score = 65.9 bits (33), Expect = 2e-07
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 67392 atgtaggcggcccagaagcgagcgacggcacggtcgtaggggtcg 67436
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 73340 atgtaggcggcccagaagcgagcgacggcgcgctcgtaggggtcg 73384
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 34401 atgtaggcggcccagaagcgagcgacggcgcggtcgtaggggtcg 34445
Score = 56.0 bits (28), Expect = 2e-04
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
|||||||||||||||||||| |||||||||||
Sbjct: 26067 tcaatgtaggcggcccagaagcgagcgacggc 26098
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 534 gcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||||||| ||||||||||| |||| || ||||||| | |||||||||
Sbjct: 128963 gcggcccagaagcgagcgacggcgcgttcgtgggggtcggcggggagcagg 129013
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||| ||||||| ||||||||||| || | |||||||||| | |||||||||
Sbjct: 70569 gtaggcgacccagaagcgagcgacggcgcgctcgtaggggtcggcggggagcagg 70623
Score = 50.1 bits (25), Expect = 0.010
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 532 aggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||| ||||||||||| |||| || |||||||
Sbjct: 75767 aggcggcccagaagcgagcgacggcgcgttcgtgggggtcg 75807
Score = 50.1 bits (25), Expect = 0.010
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||||||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 73419 cctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 73478
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 73479 gcacgggcacctt 73491
Score = 50.1 bits (25), Expect = 0.010
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||||||||
Sbjct: 37210 atgtaggcggcccagaagcgagcgacggc 37238
Score = 50.1 bits (25), Expect = 0.010
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| | ||||||| ||||||||||| |||| ||||||||||
Sbjct: 19563 atgtaggagacccagaagcgagcgacggcgcgttcgtaggggtcg 19607
Score = 48.1 bits (24), Expect = 0.038
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
||||||||||| |||||||| |||||||||||
Sbjct: 138255 tcaatgtaggcagcccagaagcgagcgacggc 138286
Score = 48.1 bits (24), Expect = 0.038
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 636 gactcgcaaattggcacgccattgtggatgagaacgggcacctt 679
|||||||| | |||| ||||||||||||||| |||||||||||
Sbjct: 129065 gactcgcagactggcttgccattgtggatgaggacgggcacctt 129108
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 7261 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 7219
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 4217 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 4175
Score = 44.1 bits (22), Expect = 0.59
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 606 acctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatg 665
|||||||||||||||| || |||| | | |||||||| || ||| ||| |||||||||
Sbjct: 138336 acctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgcctttgtggatg 138395
Query: 666 agaacgggcacctt 679
|| ||||| |||||
Sbjct: 138396 agcacggggacctt 138409
Score = 44.1 bits (22), Expect = 0.59
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 531 taggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| |||||| ||||||||||| |||| || |||||||
Sbjct: 31940 taggcggtccagaagcgagcgacggcgcgttcgtgggggtcg 31981
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| ||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 52202 cctcgtcgaggtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 52261
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 52262 gcacgggcacctt 52274
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| |||||||| |||| | |||||||| || ||| ||| ||||||||||
Sbjct: 37289 cctcgtcgacgtactccacgatgatctgcgactcgcagatgggcttgccgttgtggatga 37348
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 37349 gcacgggcacctt 37361
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||| ||||
Sbjct: 23288 atgtaggcggcccagaagcgagcggcggc 23316
Score = 40.1 bits (20), Expect = 9.3
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 167 ctgagcacgtttcatcttggcaaactcaacca 198
|||| |||| ||||||||||||||||| ||||
Sbjct: 25635 ctgaacacgcttcatcttggcaaactcgacca 25666
>gb|AC113948.5 | Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
sequence
Length = 132900
Score = 65.9 bits (33), Expect = 2e-07
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 125693 atgtaggcggcccagaagcgagcgacggcacggtcgtaggggtcg 125737
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 532 aggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcag 583
||||||||||||| ||||||||||| || |||||||||||| | ||||||||
Sbjct: 56224 aggcggcccagaagcgagcgacggcgcggtggtaggggtcggcggggagcag 56275
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 131641 atgtaggcggcccagaagcgagcgacggcgcgctcgtaggggtcg 131685
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 92702 atgtaggcggcccagaagcgagcgacggcgcggtcgtaggggtcg 92746
Score = 56.0 bits (28), Expect = 2e-04
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
|||||||||||||||||||| |||||||||||
Sbjct: 84368 tcaatgtaggcggcccagaagcgagcgacggc 84399
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||| ||||||| ||||||||||| || | |||||||||| | |||||||||
Sbjct: 128870 gtaggcgacccagaagcgagcgacggcgcgctcgtaggggtcggcggggagcagg 128924
Score = 50.1 bits (25), Expect = 0.010
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||||||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 131720 cctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 131779
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 131780 gcacgggcacctt 131792
Score = 50.1 bits (25), Expect = 0.010
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||||||||
Sbjct: 95511 atgtaggcggcccagaagcgagcgacggc 95539
Score = 50.1 bits (25), Expect = 0.010
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| | ||||||| ||||||||||| |||| ||||||||||
Sbjct: 77864 atgtaggagacccagaagcgagcgacggcgcgttcgtaggggtcg 77908
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 65562 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 65520
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 62518 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 62476
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 54179 gtaggcggcccagaagcgggcgacggcgcgctcgtaggggtcg 54221
Score = 44.1 bits (22), Expect = 0.59
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 531 taggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| |||||| ||||||||||| |||| || |||||||
Sbjct: 90241 taggcggtccagaagcgagcgacggcgcgttcgtgggggtcg 90282
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| ||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 110503 cctcgtcgaggtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 110562
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 110563 gcacgggcacctt 110575
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| |||||||| |||| | |||||||| || ||| ||| ||||||||||
Sbjct: 95590 cctcgtcgacgtactccacgatgatctgcgactcgcagatgggcttgccgttgtggatga 95649
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 95650 gcacgggcacctt 95662
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||| ||||
Sbjct: 81589 atgtaggcggcccagaagcgagcggcggc 81617
Score = 40.1 bits (20), Expect = 9.3
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 167 ctgagcacgtttcatcttggcaaactcaacca 198
|||| |||| ||||||||||||||||| ||||
Sbjct: 83936 ctgaacacgcttcatcttggcaaactcgacca 83967
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 65.9 bits (33), Expect = 2e-07
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 20040798 atgtaggcggcccagaagcgagcgacggcacggtcgtaggggtcg 20040754
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 532 aggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcag 583
||||||||||||| ||||||||||| || |||||||||||| | ||||||||
Sbjct: 20110267 aggcggcccagaagcgagcgacggcgcggtggtaggggtcggcggggagcag 20110216
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 20073789 atgtaggcggcccagaagcgagcgacggcgcggtcgtaggggtcg 20073745
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 20034850 atgtaggcggcccagaagcgagcgacggcgcgctcgtaggggtcg 20034806
Score = 56.0 bits (28), Expect = 2e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
|||||||||||||||||||| |||||||||||
Sbjct: 20082123 tcaatgtaggcggcccagaagcgagcgacggc 20082092
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||| ||||||| ||||||||||| || | |||||||||| | |||||||||
Sbjct: 20037621 gtaggcgacccagaagcgagcgacggcgcgctcgtaggggtcggcggggagcagg 20037567
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 534 gcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||||||| ||||||||||| |||| || ||||||| | |||||||||
Sbjct: 19979227 gcggcccagaagcgagcgacggcgcgttcgtgggggtcggcggggagcagg 19979177
Score = 50.1 bits (25), Expect = 0.010
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| | ||||||| ||||||||||| |||| ||||||||||
Sbjct: 20088627 atgtaggagacccagaagcgagcgacggcgcgttcgtaggggtcg 20088583
Score = 50.1 bits (25), Expect = 0.010
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||||||||
Sbjct: 20070980 atgtaggcggcccagaagcgagcgacggc 20070952
Score = 50.1 bits (25), Expect = 0.010
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||||||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 20034771 cctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 20034712
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 20034711 gcacgggcacctt 20034699
Score = 50.1 bits (25), Expect = 0.010
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 532 aggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||| ||||||||||| |||| || |||||||
Sbjct: 20032423 aggcggcccagaagcgagcgacggcgcgttcgtgggggtcg 20032383
Score = 48.1 bits (24), Expect = 0.038
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 636 gactcgcaaattggcacgccattgtggatgagaacgggcacctt 679
|||||||| | |||| ||||||||||||||| |||||||||||
Sbjct: 19979125 gactcgcagactggcttgccattgtggatgaggacgggcacctt 19979082
Score = 48.1 bits (24), Expect = 0.038
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
||||||||||| |||||||| |||||||||||
Sbjct: 19969935 tcaatgtaggcagcccagaagcgagcgacggc 19969904
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 20112312 gtaggcggcccagaagcgggcgacggcgcgctcgtaggggtcg 20112270
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 20103973 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 20104015
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 20100929 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 20100971
Score = 44.1 bits (22), Expect = 0.59
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 531 taggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| |||||| ||||||||||| |||| || |||||||
Sbjct: 20076250 taggcggtccagaagcgagcgacggcgcgttcgtgggggtcg 20076209
Score = 44.1 bits (22), Expect = 0.59
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 606 acctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatg 665
|||||||||||||||| || |||| | | |||||||| || ||| ||| |||||||||
Sbjct: 19969854 acctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgcctttgtggatg 19969795
Query: 666 agaacgggcacctt 679
|| ||||| |||||
Sbjct: 19969794 agcacggggacctt 19969781
Score = 44.1 bits (22), Expect = 0.59
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 604 agacctcgtcgatgtactccaagatggcgagtgactcg 641
||||||||||||||||||| | |||| |||| ||||||
Sbjct: 19913680 agacctcgtcgatgtactcgacgatgacgagagactcg 19913717
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||| ||||
Sbjct: 20084902 atgtaggcggcccagaagcgagcggcggc 20084874
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| |||||||| |||| | |||||||| || ||| ||| ||||||||||
Sbjct: 20070901 cctcgtcgacgtactccacgatgatctgcgactcgcagatgggcttgccgttgtggatga 20070842
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 20070841 gcacgggcacctt 20070829
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| ||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 20055988 cctcgtcgaggtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 20055929
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 20055928 gcacgggcacctt 20055916
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||| ||||||||| |||||||||||
Sbjct: 19919062 atgtaggaggcccagaagcgagcgacggc 19919034
Score = 40.1 bits (20), Expect = 9.3
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 167 ctgagcacgtttcatcttggcaaactcaacca 198
|||| |||| ||||||||||||||||| ||||
Sbjct: 20082555 ctgaacacgcttcatcttggcaaactcgacca 20082524
>gb|AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 65.9 bits (33), Expect = 2e-07
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct: 20052074 atgtaggcggcccagaagcgagcgacggcacggtcgtaggggtcg 20052030
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 532 aggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcag 583
||||||||||||| ||||||||||| || |||||||||||| | ||||||||
Sbjct: 20121543 aggcggcccagaagcgagcgacggcgcggtggtaggggtcggcggggagcag 20121492
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 20085065 atgtaggcggcccagaagcgagcgacggcgcggtcgtaggggtcg 20085021
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||||| ||||||||||| || | ||||||||||
Sbjct: 20046126 atgtaggcggcccagaagcgagcgacggcgcgctcgtaggggtcg 20046082
Score = 56.0 bits (28), Expect = 2e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
|||||||||||||||||||| |||||||||||
Sbjct: 20093399 tcaatgtaggcggcccagaagcgagcgacggc 20093368
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||| ||||||| ||||||||||| || | |||||||||| | |||||||||
Sbjct: 20048897 gtaggcgacccagaagcgagcgacggcgcgctcgtaggggtcggcggggagcagg 20048843
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 534 gcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||||||| ||||||||||| |||| || ||||||| | |||||||||
Sbjct: 19990503 gcggcccagaagcgagcgacggcgcgttcgtgggggtcggcggggagcagg 19990453
Score = 50.1 bits (25), Expect = 0.010
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| | ||||||| ||||||||||| |||| ||||||||||
Sbjct: 20099903 atgtaggagacccagaagcgagcgacggcgcgttcgtaggggtcg 20099859
Score = 50.1 bits (25), Expect = 0.010
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||||||||
Sbjct: 20082256 atgtaggcggcccagaagcgagcgacggc 20082228
Score = 50.1 bits (25), Expect = 0.010
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||||||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 20046047 cctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 20045988
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 20045987 gcacgggcacctt 20045975
Score = 50.1 bits (25), Expect = 0.010
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 532 aggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||| ||||||||||| |||| || |||||||
Sbjct: 20043699 aggcggcccagaagcgagcgacggcgcgttcgtgggggtcg 20043659
Score = 48.1 bits (24), Expect = 0.038
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 636 gactcgcaaattggcacgccattgtggatgagaacgggcacctt 679
|||||||| | |||| ||||||||||||||| |||||||||||
Sbjct: 19990401 gactcgcagactggcttgccattgtggatgaggacgggcacctt 19990358
Score = 48.1 bits (24), Expect = 0.038
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
||||||||||| |||||||| |||||||||||
Sbjct: 19981211 tcaatgtaggcagcccagaagcgagcgacggc 19981180
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 20123588 gtaggcggcccagaagcgggcgacggcgcgctcgtaggggtcg 20123546
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 20115249 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 20115291
Score = 46.1 bits (23), Expect = 0.15
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 530 gtaggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||||||||||| || |||||||| || | ||||||||||
Sbjct: 20112205 gtaggcggcccagaagcgggcgacggcgcggtcgtaggggtcg 20112247
Score = 44.1 bits (22), Expect = 0.59
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 531 taggcggcccagaaccgagcgacggcacgttggtaggggtcg 572
||||||| |||||| ||||||||||| |||| || |||||||
Sbjct: 20087526 taggcggtccagaagcgagcgacggcgcgttcgtgggggtcg 20087485
Score = 44.1 bits (22), Expect = 0.59
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 606 acctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatg 665
|||||||||||||||| || |||| | | |||||||| || ||| ||| |||||||||
Sbjct: 19981130 acctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgcctttgtggatg 19981071
Query: 666 agaacgggcacctt 679
|| ||||| |||||
Sbjct: 19981070 agcacggggacctt 19981057
Score = 44.1 bits (22), Expect = 0.59
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 604 agacctcgtcgatgtactccaagatggcgagtgactcg 641
||||||||||||||||||| | |||| |||| ||||||
Sbjct: 19924956 agacctcgtcgatgtactcgacgatgacgagagactcg 19924993
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||||||||||||| |||||| ||||
Sbjct: 20096178 atgtaggcggcccagaagcgagcggcggc 20096150
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| |||||||| |||| | |||||||| || ||| ||| ||||||||||
Sbjct: 20082177 cctcgtcgacgtactccacgatgatctgcgactcgcagatgggcttgccgttgtggatga 20082118
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 20082117 gcacgggcacctt 20082105
Score = 42.1 bits (21), Expect = 2.3
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 607 cctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatga 666
||||||||| ||||| || |||| | | |||||||| || ||| ||| ||||||||||
Sbjct: 20067264 cctcgtcgaggtactgcacgatgacctgcgactcgcagatgggcttgccgttgtggatga 20067205
Query: 667 gaacgggcacctt 679
| |||||||||||
Sbjct: 20067204 gcacgggcacctt 20067192
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||| ||||||||| |||||||||||
Sbjct: 19930338 atgtaggaggcccagaagcgagcgacggc 19930310
Score = 40.1 bits (20), Expect = 9.3
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 167 ctgagcacgtttcatcttggcaaactcaacca 198
|||| |||| ||||||||||||||||| ||||
Sbjct: 20093831 ctgaacacgcttcatcttggcaaactcgacca 20093800
>gb|AC074232.11 | Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence,
complete sequence
Length = 116932
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 534 gcggcccagaaccgagcgacggcacgttggtaggggtcgccagggagcagg 584
||||||||||| ||||||||||| |||| || ||||||| | |||||||||
Sbjct: 6816 gcggcccagaagcgagcgacggcgcgttcgtgggggtcggcggggagcagg 6866
Score = 48.1 bits (24), Expect = 0.038
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 525 tcaatgtaggcggcccagaaccgagcgacggc 556
||||||||||| |||||||| |||||||||||
Sbjct: 16108 tcaatgtaggcagcccagaagcgagcgacggc 16139
Score = 48.1 bits (24), Expect = 0.038
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 636 gactcgcaaattggcacgccattgtggatgagaacgggcacctt 679
|||||||| | |||| ||||||||||||||| |||||||||||
Sbjct: 6918 gactcgcagactggcttgccattgtggatgaggacgggcacctt 6961
Score = 44.1 bits (22), Expect = 0.59
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 604 agacctcgtcgatgtactccaagatggcgagtgactcg 641
||||||||||||||||||| | |||| |||| ||||||
Sbjct: 72363 agacctcgtcgatgtactcgacgatgacgagagactcg 72326
Score = 44.1 bits (22), Expect = 0.59
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 606 acctcgtcgatgtactccaagatggcgagtgactcgcaaattggcacgccattgtggatg 665
|||||||||||||||| || |||| | | |||||||| || ||| ||| |||||||||
Sbjct: 16189 acctcgtcgatgtactgcacgatgacctgcgactcgcagatgggcttgcctttgtggatg 16248
Query: 666 agaacgggcacctt 679
|| ||||| |||||
Sbjct: 16249 agcacggggacctt 16262
Score = 42.1 bits (21), Expect = 2.3
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 528 atgtaggcggcccagaaccgagcgacggc 556
||||||| ||||||||| |||||||||||
Sbjct: 66981 atgtaggaggcccagaagcgagcgacggc 67009
>emb|AL831714.14 | Mouse DNA sequence from clone RP23-311D24 on chromosome 4, complete
sequence
Length = 120815
Score = 40.1 bits (20), Expect = 9.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tttgacatctttcatggcgc 68
||||||||||||||||||||
Sbjct: 30894 tttgacatctttcatggcgc 30913
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,091,323
Number of Sequences: 3902068
Number of extensions: 5091323
Number of successful extensions: 99885
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 99279
Number of HSP's gapped (non-prelim): 591
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)