| Clone Name | rbaal10n03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SAS6_XENLA (Q6NRG6) Spindle assembly abnormal protein 6 homolog | 30 | 8.0 | 2 | TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containin... | 30 | 8.0 |
|---|
>SAS6_XENLA (Q6NRG6) Spindle assembly abnormal protein 6 homolog| Length = 668 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = -3 Query: 421 DEYRKVKE----LMRTGSLVEDEAHANERGANNIQDKTAGGEQATGDK 290 +EY + K+ L R + ++ E H E+ N ++ KTA EQ DK Sbjct: 291 EEYHRAKQEVTSLRRENATLDSECHEKEKLINQLKTKTAVLEQEVKDK 338
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +2 Query: 284 FALVACCLFSSRGFVLDVVCTSLIRMGLVFNQGSSAHQFLNLAVFIVVI 430 + +ACC R F D++ ++ + L F G+ + + N AV I +I Sbjct: 146 YLTLACCQGPRRRFPWDIILLTIFTLALGFVTGTISSMYENKAVIIAMI 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,659,875 Number of Sequences: 219361 Number of extensions: 1297387 Number of successful extensions: 3014 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2931 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3014 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)