ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11c02 |
|---|---|
| Clone Library Name | barley_pub |
>EXT1_DROME (Q9V730) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein| tout-velu) Length = 760 Score = 59.7 bits (143), Expect = 8e-09 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 2/108 (1%) Frame = -2 Query: 653 RELPYGRTSKNNPLFDISTDHPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVI 474 REL R ++N +D Y +Q + FCL P G S R +EA+ GCIPV+ Sbjct: 302 RELQDNRCDEDNREYD-----RYDYETLLQNSTFCLVPRGRRLGSFRFLEALQAGCIPVL 356 Query: 473 IADDIVLPFADAIPWEEIGIFVEEKDVPKLDTILTSMPIEDI--LRKQ 336 +++ VLPF I W++ I+ +E+ + ++ I+ S+P E I LR+Q Sbjct: 357 LSNAWVLPFESKIDWKQAAIWADERLLLQVPDIVRSIPAERIFALRQQ 404
>EXT1_CAEEL (O01704) Multiple exostoses homolog 1 (Related to mammalian RIB| protein 1) Length = 378 Score = 56.6 bits (135), Expect = 7e-08 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y E + + FCL P G S R +E + GC+PV+I+D +LPF++ I W I V E Sbjct: 258 YDELLANSTFCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAE 317 Query: 401 KDVPKLDTILTS 366 +D + +L S Sbjct: 318 RDALSIPELLMS 329
>EXT2_BOVIN (O77783) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (HS-polymerase) (HS-POL) (Multiple exostoses protein 2 homolog) Length = 718 Score = 56.2 bits (134), Expect = 9e-08 Identities = 29/83 (34%), Positives = 45/83 (54%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y + +Q A FC+ G L + + GC+PVIIAD VLPF++ + W+ + V E Sbjct: 308 YPQVLQEATFCMVLRGARLGQAVLSDVLRAGCVPVIIADSYVLPFSEVLDWKRASVVVPE 367 Query: 401 KDVPKLDTILTSMPIEDILRKQR 333 + + + +IL S+P I QR Sbjct: 368 EKMSDVYSILQSIPRRQIEEMQR 390
>EXT2_HUMAN (Q93063) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT2) (Multiple exostoses protein Length = 718 Score = 55.5 bits (132), Expect = 1e-07 Identities = 27/83 (32%), Positives = 45/83 (54%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y + +Q A FC+ G L + + GC+PV+IAD +LPF++ + W+ + V E Sbjct: 308 YPQVLQEATFCVVLRGARLGQAVLSDVLQAGCVPVVIADSYILPFSEVLDWKRASVVVPE 367 Query: 401 KDVPKLDTILTSMPIEDILRKQR 333 + + + +IL S+P I QR Sbjct: 368 EKMSDVYSILQSIPQRQIEEMQR 390
>EXT2_MOUSE (P70428) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 2 homolog) Length = 718 Score = 50.8 bits (120), Expect = 4e-06 Identities = 25/83 (30%), Positives = 44/83 (53%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y + +Q A FC L + + GC+PV+IAD +LPF++ + W++ + V E Sbjct: 308 YPQVLQEATFCTVLRRARLGQAVLSDVLQAGCVPVVIADSYILPFSEVLDWKKASVVVPE 367 Query: 401 KDVPKLDTILTSMPIEDILRKQR 333 + + + +IL ++P I QR Sbjct: 368 EKMSDVYSILQNIPQRQIEEMQR 390
>EXT1_MOUSE (P97464) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/79 (30%), Positives = 45/79 (56%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y E + A FCL P G S R +EA+ C+PV++++ LPF++ I W + + +E Sbjct: 324 YREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDE 383 Query: 401 KDVPKLDTILTSMPIEDIL 345 + + ++ + + S+ + IL Sbjct: 384 RLLLQIPSTIRSIHQDKIL 402
>EXT1_HUMAN (Q16394) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT1) (Multiple exostoses protein Length = 746 Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/79 (30%), Positives = 45/79 (56%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y E + A FCL P G S R +EA+ C+PV++++ LPF++ I W + + +E Sbjct: 324 YREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDE 383 Query: 401 KDVPKLDTILTSMPIEDIL 345 + + ++ + + S+ + IL Sbjct: 384 RLLLQIPSTIRSIHQDKIL 402
>EXT1_CRIGR (Q9JK82) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Heparan sulfate| copolymerase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 49.3 bits (116), Expect = 1e-05 Identities = 24/79 (30%), Positives = 45/79 (56%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y E + A FCL P G S R +EA+ C+PV++++ LPF++ I W + + +E Sbjct: 324 YREMLHNATFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDE 383 Query: 401 KDVPKLDTILTSMPIEDIL 345 + + ++ + + S+ + IL Sbjct: 384 RLLLQIPSTIRSIHQDKIL 402
>EXT1C_BRARE (Q5IGR6) Exostosin-1c (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1c) (Multiple exostoses protein 1 homolog c) Length = 737 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/79 (29%), Positives = 46/79 (58%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y E + + FCL P G S R +E++ CIPV++++ LPF+D I W + + +E Sbjct: 316 YQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWELPFSDVIQWNQAVVEGDE 375 Query: 401 KDVPKLDTILTSMPIEDIL 345 + + ++ + + ++ I+ +L Sbjct: 376 RLLLQVPSTVRAVGIDRVL 394
>EXT1B_BRARE (Q5IGR7) Exostosin-1b (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1b) (Multiple exostoses protein 1 homolog b) Length = 741 Score = 47.4 bits (111), Expect = 4e-05 Identities = 27/97 (27%), Positives = 50/97 (51%) Frame = -2 Query: 635 RTSKNNPLFDISTDHPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIV 456 R K+N +D Y E + + FCL P G S R +EA+ C+PV++++ Sbjct: 306 RCDKDNAEYD-----KYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWE 360 Query: 455 LPFADAIPWEEIGIFVEEKDVPKLDTILTSMPIEDIL 345 LPF++ I W + +E+ + ++ + + S+ + IL Sbjct: 361 LPFSEVIDWNTAAVIGDERLLLQIPSTVRSIHQDKIL 397
>EXT1A_BRARE (Q5IGR8) Exostosin-1a (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1a) (Multiple exostoses protein 1 homolog a) Length = 730 Score = 46.2 bits (108), Expect = 9e-05 Identities = 23/79 (29%), Positives = 44/79 (55%) Frame = -2 Query: 581 YYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEE 402 Y E + + FCL P G S R +EA+ C+PV++++ LPF++ I W + +E Sbjct: 308 YKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEIIDWRTAAVIGDE 367 Query: 401 KDVPKLDTILTSMPIEDIL 345 + + ++ + + S+ + IL Sbjct: 368 RLLLQIPSTVRSIHQDRIL 386
>EXT2_DROME (Q9Y169) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Protein sister| of tout-velu) Length = 717 Score = 45.4 bits (106), Expect = 2e-04 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Frame = -2 Query: 605 ISTDHPATYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPW 429 +S H + Y + R FCL P LVE + CIPVI D+ VLPF D I W Sbjct: 299 LSQHHKSLEYPRLLSRGKFCLLGRSLRMGQPDLVEIMSQHCIPVIAVDNYVLPFEDVIDW 358 Query: 428 EEIGIFVEEKDVPKLDTILTSMPIEDILRKQR 333 + + E ++ + L ++ I+ Q+ Sbjct: 359 SLASVRIRENELHSVMQKLKAISSVKIVEMQK 390
>EXTL3_HUMAN (O43909) Exostosin-like 3 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXTL3) (Multiple exostosis-like protein 3) (Hereditary multiple exostoses gene isolog) (E Length = 919 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -2 Query: 515 RLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEEKDVPKLDTILTSMPIEDILRKQ 336 RL EA+ G +PV++ + + LP+ D + W E + V + V ++ +L S+ D+L + Sbjct: 450 RLFEALEVGAVPVVLGEQVQLPYQDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMR 509 Query: 335 R 333 R Sbjct: 510 R 510
>EXTL3_MOUSE (Q9WVL6) Exostosin-like 3 (EC 2.4.1.-) (Multiple exostosis-like| protein 3) Length = 918 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -2 Query: 515 RLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEEKDVPKLDTILTSMPIEDILRKQ 336 RL EA+ G +PV++ + + LP+ D + W E + V + V ++ +L S+ D+L + Sbjct: 449 RLFEALEVGAVPVVLGEQVQLPYHDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMR 508 Query: 335 R 333 R Sbjct: 509 R 509
>EXTL1_MOUSE (Q9JKV7) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 669 Score = 41.2 bits (95), Expect = 0.003 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = -2 Query: 575 EDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEEK 399 E + A FCL P G + ++A+ GCIPV+++ LPF++ I W + I +E+ Sbjct: 259 ETLPNATFCLIP-GHRSATSCFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIIADER 316
>EXTL1_HUMAN (Q92935) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 676 Score = 40.4 bits (93), Expect = 0.005 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -2 Query: 575 EDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEEK 399 E + A FCL + R ++A+ GCIPV+++ LPF++ I W + I +E+ Sbjct: 265 ETLPNATFCLISGHRPEAASRFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIVADER 323
>EXT2_CAEEL (O01705) Exostosin-2 (EC 2.4.1.223) (EC 2.4.1.224)| (Glucuronyl-galactosyl-proteoglycan/Glucuronosyl-N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses homolog 2) Length = 814 Score = 40.0 bits (92), Expect = 0.006 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = -2 Query: 509 VEAVVFGCIPVIIADDIVLPFADAIPWEEIGIFVEEKDVPKLDTILTSMPIEDILRKQRL 330 + ++ GCIP+I+++ +LPF D I W + +P+ I+ S I DI+ +R+ Sbjct: 351 LSSLQLGCIPIILSNSQLLPFQDLIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRRV 410
>EXT3_DROME (Q9XZ08) Exostosin-3 (EC 2.4.1.223) (Protein brother of tout-velu)| Length = 972 Score = 38.5 bits (88), Expect = 0.019 Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Frame = -2 Query: 515 RLVEAVVFGCIPVII-ADDIVLPFADAIPWEEIGIFVEEKDVPKLDTILTSMPIEDILRK 339 R+ EA+ G +PVI+ AD++ LP+A+ + W + + + + +L +L ++ D+L Sbjct: 500 RIYEALRSGAVPVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLLL 559 Query: 338 QR 333 +R Sbjct: 560 RR 561
>DHX9_CAEEL (Q22307) Probable ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear| DNA helicase II) (NDH II) Length = 1301 Score = 35.0 bits (79), Expect = 0.21 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%) Frame = -2 Query: 428 EEIGIFVEEKDVPKLDTILTSMPIEDILRKQRLLANP--------SMKQAMLFPQPAQPR 273 + +G ++ L +L MPIE ++ K +L + AM FP P PR Sbjct: 846 QAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFVPR 905 Query: 272 DAFHQILNGLARK 234 + H L+G RK Sbjct: 906 EKHHSRLSGTQRK 918
>Y4BF_RHISN (P55373) Putative transposase y4bF| Length = 457 Score = 34.7 bits (78), Expect = 0.27 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +3 Query: 96 ELFLCGLCGKDDGNSFLPRF 155 +L L G+CG DDGN+FLPRF Sbjct: 265 DLRLEGICGMDDGNAFLPRF 284
>MAML2_HUMAN (Q8IZL2) Mastermind-like protein 2 (Mam-2)| Length = 1153 Score = 33.1 bits (74), Expect = 0.78 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 418 PISSHGIASANGSTISSAMMTGMQPKTTASTNLGLHGAQP 537 P+S+H I + N S +S++ T M +TA N+G++G P Sbjct: 832 PVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLP 871
>ZBT26_HUMAN (Q9HCK0) Zinc finger and BTB domain-containing protein 26 (Zinc| finger protein 481) (Zinc finger protein Bioref) Length = 441 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 36 PWCNLHLRHCVSITSHTRKYELFLCGLCGK 125 P C RH + +H + ++LF+C LCGK Sbjct: 276 PKCTRVFRHLENYANHLKMHKLFMCLLCGK 305
>VM01_VACCV (P14356) Ankyrin repeat protein M1| Length = 421 Score = 31.6 bits (70), Expect = 2.3 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +1 Query: 286 GCGNNMACFIDGFASNLCFLRISSMGIDVRIVSNFGTSFSSTKIPISSHGIA-SANGSTI 462 GCG +AC S F +I S+G + RIV FG K I H ++ + STI Sbjct: 116 GCGPLLACTDP---SERVFKKIMSIGFEARIVDKFG------KNHIHRHLMSDNPKASTI 166 Query: 463 SSAMMTGMQP-KTTASTNLGLH 525 S M G+ P K N LH Sbjct: 167 SWMMKLGISPSKPDHDGNTPLH 188
>VM01_VACCC (P20640) Ankyrin repeat protein M1| Length = 472 Score = 31.6 bits (70), Expect = 2.3 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +1 Query: 286 GCGNNMACFIDGFASNLCFLRISSMGIDVRIVSNFGTSFSSTKIPISSHGIA-SANGSTI 462 GCG +AC S F +I S+G + RIV FG K I H ++ + STI Sbjct: 167 GCGPLLACTDP---SERVFKKIMSIGFEARIVDKFG------KNHIHRHLMSDNPKASTI 217 Query: 463 SSAMMTGMQP-KTTASTNLGLH 525 S M G+ P K N LH Sbjct: 218 SWMMKLGISPSKPDHDGNTPLH 239
>VDAC3_RAT (Q9R1Z0) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +3 Query: 462 IISYDDWNAAKDNSLNQPRAPWCPAQWA*---AEDCTLHVFVVSGRVIGGNVKQRI 620 +++++ W A S + ++ C +A AED LH V G GG++ QR+ Sbjct: 143 VLAFEGWLAGYQMSFDTAKSKLCQNNFALGYKAEDFQLHTHVNDGTEFGGSIYQRV 198
>ADPN_HUMAN (Q9NST1) Adiponutrin (iPLA2-epsilon) (Calcium-independent| phospholipase A2-epsilon) (Patatin-like phospholipase domain-containing protein 3) [Includes: Triacylglycerol lipase (EC 3.1.1.3); Acylglycerol O-acyltransferase (EC 2.3.1.-)] Length = 481 Score = 30.8 bits (68), Expect = 3.9 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 297 VPTASPTARCIPPDLEWPCS*APTPRGCILATRWEAS 187 +P +S A P+ +WPC +P+GC T+ EA+ Sbjct: 409 MPVSSQQASPCTPEQDWPCWTPCSPKGCPAETKAEAT 445
>TBG1_RAT (P83888) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.4 bits (67), Expect = 5.1 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -2 Query: 281 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 171 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG 107
>TBG1_MOUSE (P83887) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.4 bits (67), Expect = 5.1 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -2 Query: 281 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 171 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG 107
>HEM1_DESVH (Q72C23) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 440 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Frame = -2 Query: 410 VEEKDVPKLDTILTSMPIE----DILRKQRLLANPSMKQAM--LFPQPAQPRDAFHQILN 249 + E++ K L S+ ++ D++R+ +A + + + L P + RDA +L+ Sbjct: 324 IVEEETGKFGQWLRSLELQPTIVDLIRRSERIAQDELARTLKRLGPVDDETRDALEAMLS 383 Query: 248 GLARKLPHPEGVYLPPGGKHLNWTAGP 168 + RKL H +L +H AGP Sbjct: 384 SMVRKLNHEPITFLK--RRHSEEDAGP 408
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 30.4 bits (67), Expect = 5.1 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 105 LCGLCGKDDGNSFLPRFQISNRSSSPVQMLPTGWQ 209 LCGLCG DGNS ++ + + L WQ Sbjct: 1287 LCGLCGNYDGNSDNDHLKLDGSPAGDKEELGNSWQ 1321
>TBG2_HUMAN (Q9NRH3) Tubulin gamma-2 chain (Gamma-2 tubulin)| Length = 451 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -2 Query: 281 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 171 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG 107
>TBG1_HUMAN (P23258) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -2 Query: 281 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 171 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG 107
>TBG1_CANFA (Q9GKK5) Tubulin gamma-1 chain (Gamma-1 tubulin) (Gamma-tubulin| complex component 1) (GCP-1) Length = 451 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = -2 Query: 281 QPRDAFHQILNGLARKLPHPEGVYLPP--GGKHLNWTAG 171 +PR H ILN KL +PE +YL GG NW +G Sbjct: 70 EPR-VIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG 107
>NU4M_TETNG (Q4JQH8) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 460 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 183 VQMLPTGWQVYTLWVWELTSKAIQDLVECISRLGWL 290 V ++PT W T W+W T + L+ ++ L WL Sbjct: 9 VMLIPTAWLAPTKWLWPTT--LLHSLLIALASLSWL 42
>ATR_ARATH (Q9FKS4) Serine/threonine-protein kinase ATR (EC 2.7.11.1)| (DNA-repair protein ATR) (AtATR) (Ataxia telangiectasia-mutated and Rad3-related homolog) (Rad3-like protein) (AtRAD3) Length = 2702 Score = 30.0 bits (66), Expect = 6.6 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Frame = -2 Query: 449 FADAIP--WEEIGIFVEEKDVPKLDTILTSMPIEDILRK-QRLLANPSMKQAMLFPQPAQ 279 FA A+P +E+ FV+ D P+ D L +P D ++K ++L N L Sbjct: 1041 FAAALPALLDELVCFVDIADTPETDRRLQRLP--DAIKKISKVLTNAEDLPGFL------ 1092 Query: 278 PRDAFHQILNGLARKLPHPEGVYL 207 ++ F +LN + RK+ H + ++L Sbjct: 1093 -QNHFVGLLNSIDRKMLHADDIFL 1115
>DYHC_FUSSO (P78716) Dynein heavy chain, cytosolic (DYHC)| Length = 4349 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -2 Query: 272 DAFHQI-LNGLARKLPHPEGVYLPPGGKHLNW--TAGPVGDL 156 D FHQ+ L+G+ K P+P YL + L W A PV DL Sbjct: 3541 DWFHQLHLSGIQYKSPNPVTEYLSTADERLGWQENALPVDDL 3582
>ZN646_HUMAN (O15015) Zinc finger protein 646| Length = 1829 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = +3 Query: 42 CNLHLRHCVSITSHTRKYE--LFLCGLCGKDDGN 137 C RH S+ +H R +E LF C CGKD N Sbjct: 53 CGRGYRHPGSLVNHRRTHETGLFPCTTCGKDFSN 86
>ECA3_ARATH (Q9SY55) Calcium-transporting ATPase 3, endoplasmic reticulum-type| (EC 3.6.3.8) Length = 998 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -2 Query: 593 HPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIV 456 H Y +F + PL WA W+ AV++ PVII D+++ Sbjct: 930 HVLILYVHPLAVLFSVTPLSWAEWT-----AVLYLSFPVIIIDELL 970
>KAR1_YEAST (P11927) Cell division control protein KAR1| Length = 433 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/54 (29%), Positives = 31/54 (57%) Frame = +3 Query: 72 ITSHTRKYELFLCGLCGKDDGNSFLPRFQISNRSSSPVQMLPTGWQVYTLWVWE 233 I HT+K + + L KDD +S R ++N +++P QM+ GW+ + +++ Sbjct: 349 IEMHTKKLDTIIELL--KDDTDSKEKRKVVTNDNAAPEQMVNKGWRKNVMMIYK 400 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,662,850 Number of Sequences: 219361 Number of extensions: 2767907 Number of successful extensions: 8236 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 7698 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8236 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
