ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6h14 |
|---|---|
| Clone Library Name | barley_pub |
>RL18_ARATH (P42791) 60S ribosomal protein L18| Length = 187 Score = 261 bits (667), Expect = 1e-69 Identities = 130/159 (81%), Positives = 143/159 (89%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDD 466 VKLYRFLVRRT SKFN VILKRLFMSK N+ PLS+ RL FM GKE+K IAV+VGTITDD Sbjct: 30 VKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDK-IAVLVGTITDD 88 Query: 465 MRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAV 286 +R+ EIPAMKVTALRFTE ARARI AGGECLTFDQLALRAP G+NT+LLRGPKN+REAV Sbjct: 89 LRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAV 148 Query: 285 RHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 169 +HFG APGVPHSH+KPYVR+KGRKFEKARG+R SRGFKV Sbjct: 149 KHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187
>RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)| Length = 183 Score = 248 bits (632), Expect = 1e-65 Identities = 125/159 (78%), Positives = 139/159 (87%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDD 466 VKLYRFLVRRT S FNAVILKRLFMSK NRPPLS+ RL +M+GKE K I VVVG +TDD Sbjct: 27 VKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGK-IGVVVGAVTDD 85 Query: 465 MRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREAV 286 +R+ ++P +KVTAL+FTETARARI AGGECLTFDQLALR P + T+LLRGPKNAREAV Sbjct: 86 IRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPLTD-TVLLRGPKNAREAV 144 Query: 285 RHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 169 +HFG APGVPHSHTKPYVRSKGRKFEKARGRR SRGF+V Sbjct: 145 KHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFRV 183
>RL18_HUMAN (Q07020) 60S ribosomal protein L18| Length = 187 Score = 221 bits (563), Expect = 1e-57 Identities = 112/160 (70%), Positives = 129/160 (80%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RRT S FN V+LKRLFMS+TNRPPLS+ R+ MK G+E K AVVVGTIT Sbjct: 28 VKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVVGTIT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+R+QE+P +KV ALR T AR+RI+ AGG+ LTFDQLAL +P G T+LL GP+ RE Sbjct: 87 DDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGRE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR SRG+K Sbjct: 147 VYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 186
>RL18_RAT (P12001) 60S ribosomal protein L18| Length = 187 Score = 219 bits (559), Expect = 4e-57 Identities = 111/160 (69%), Positives = 128/160 (80%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RRT S FN V+LKRLFMS+TNRPPLS+ R+ MK G+E K AVVVGTIT Sbjct: 28 VKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVVGTIT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+RI E+P +KV ALR + AR+RI+ AGG+ LTFDQLAL +P G T+LL GP+ RE Sbjct: 87 DDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGRE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR SRG+K Sbjct: 147 VYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 186
>RL18_MOUSE (P35980) 60S ribosomal protein L18| Length = 187 Score = 219 bits (558), Expect = 5e-57 Identities = 110/160 (68%), Positives = 128/160 (80%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RRT S FN V+LKRLFMS+TNRPPLS+ R+ MK G+E K AVVVGT+T Sbjct: 28 VKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKT-AVVVGTVT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+RI E+P +KV ALR + AR+RI+ AGG+ LTFDQLAL +P G T+LL GP+ RE Sbjct: 87 DDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGRE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR SRG+K Sbjct: 147 VYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 186
>RL18_ICTPU (Q90YV0) 60S ribosomal protein L18| Length = 187 Score = 217 bits (552), Expect = 3e-56 Identities = 110/160 (68%), Positives = 128/160 (80%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RR+ + FN V+LKRLFMSKTNRPPL++ RL MK G+E K IAVVVGTIT Sbjct: 28 VKLYRFLARRSDAPFNKVVLKRLFMSKTNRPPLALSRLIRKMKLQGRENK-IAVVVGTIT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+RI IP +KV ALR T AR RI+ AGG+ +TFDQLA+ P G+ T+LL GP+ ARE Sbjct: 87 DDVRILNIPKLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPRKARE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHSHTKPY+RSKGRKFE+ARGRR SRG+K Sbjct: 147 VYRHFGKAPGTPHSHTKPYIRSKGRKFERARGRRASRGYK 186
>RL18_ORENI (P69091) 60S ribosomal protein L18| Length = 187 Score = 216 bits (551), Expect = 4e-56 Identities = 107/160 (66%), Positives = 131/160 (81%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RR+ + FN V+L+RLFMS+TNRPP+++ RL MK G+E K IAVVVGT+T Sbjct: 28 VKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENK-IAVVVGTVT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+RIQ+IP +K+ ALR T+ AR RI+ AGG+ +TFDQLAL +P G+ T+LL GP+ ARE Sbjct: 87 DDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKARE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR S G+K Sbjct: 147 VYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASCGYK 186
>RL18_OREMO (P69090) 60S ribosomal protein L18| Length = 187 Score = 216 bits (551), Expect = 4e-56 Identities = 107/160 (66%), Positives = 131/160 (81%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RR+ + FN V+L+RLFMS+TNRPP+++ RL MK G+E K IAVVVGT+T Sbjct: 28 VKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPIAVSRLIRKMKLPGRENK-IAVVVGTVT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+RIQ+IP +K+ ALR T+ AR RI+ AGG+ +TFDQLAL +P G+ T+LL GP+ ARE Sbjct: 87 DDVRIQDIPKLKICALRVTDGARRRILKAGGQVMTFDQLALASPKGQGTVLLSGPRKARE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHSHTKPYVRSKGRKFE+ARGRR S G+K Sbjct: 147 VYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASCGYK 186
>RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)| Length = 187 Score = 215 bits (548), Expect = 8e-56 Identities = 110/160 (68%), Positives = 127/160 (79%), Gaps = 2/160 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKLYRFL RRT S FN V+LKRLFMS+TNRPPLSM RL MK G+E K AVVVG IT Sbjct: 28 VKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLQGRENKT-AVVVGYIT 86 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNARE 292 DD+RI +IP +KV AL+ T R+RI+ +GG+ +TFDQLAL AP G+NT+LL GP+ ARE Sbjct: 87 DDVRIHDIPKLKVCALKITSGDRSRILKSGGQIMTFDQLALAAPKGQNTVLLSGPRKARE 146 Query: 291 AVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAPG PHS TKPYV SKGRKFE+ARGRR SRG+K Sbjct: 147 VYRHFGKAPGTPHSRTKPYVLSKGRKFERARGRRASRGYK 186
>RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)| Length = 187 Score = 211 bits (537), Expect = 1e-54 Identities = 107/159 (67%), Positives = 123/159 (77%), Gaps = 1/159 (0%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK-GKEEKNIAVVVGTITD 469 VKLYRFL RRT S FN V+LKRLFMS+TNRPPLSM RL MK + E AVVVG IT Sbjct: 28 VKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPLSMSRLIRKMKLPRRENKTAVVVGCITA 87 Query: 468 DMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREA 289 D+RI +IP + V AL+ T AR+RI+ AGG+ +TFDQLAL AP G+NT+LL GP+ ARE Sbjct: 88 DVRIHDIPKLTVCALKLTSGARSRILKAGGQIMTFDQLALAAPKGQNTVLLSGPRKAREV 147 Query: 288 VRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFK 172 RHFGKAP PHS TKPYV SKGRKFE+ARGRR SRG+K Sbjct: 148 YRHFGKAPSTPHSRTKPYVLSKGRKFERARGRRASRGYK 186
>RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B| Length = 187 Score = 200 bits (509), Expect = 3e-51 Identities = 103/162 (63%), Positives = 121/162 (74%), Gaps = 3/162 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKE---EKNIAVVVGTI 475 VKLYRFL RRT S+FN ILKRLF SKTNRPP+S+ +++ K E V+VGT+ Sbjct: 29 VKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASLEGKTTVIVGTV 88 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAR 295 TDD R+ +P + V ALRFT++ARARI+ AGGE LT DQLALRAPTG NT+LLRG K+AR Sbjct: 89 TDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAR 148 Query: 294 EAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 169 EA RHFG PH H PYVRS+GRKFE+ARGRR SR FKV Sbjct: 149 EAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
>RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A| Length = 187 Score = 198 bits (504), Expect = 1e-50 Identities = 101/162 (62%), Positives = 121/162 (74%), Gaps = 3/162 (1%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKE---EKNIAVVVGTI 475 VKLYRFL RRT S+FN ILKRLF SKTNRPP+S+ +++ K + VVVGT+ Sbjct: 29 VKLYRFLARRTDSRFNKAILKRLFQSKTNRPPISISKIAALTSRKSASSQNKTTVVVGTV 88 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAR 295 TDD R+ +P + + ALRFT++ARARI+ AGGE LT DQLALRAPTG NT+L+RG K+AR Sbjct: 89 TDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAR 148 Query: 294 EAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 169 EA RHFG PH H PYVRS+GRKFE+ARGRR SR FKV Sbjct: 149 EAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
>RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)| Length = 186 Score = 189 bits (480), Expect = 6e-48 Identities = 97/160 (60%), Positives = 118/160 (73%), Gaps = 1/160 (0%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKN-IAVVVGTITD 469 VKLY FL RRT + FN V+LK LF+SK NRPP+S+ R++ +K + N VVVGT+TD Sbjct: 30 VKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTD 89 Query: 468 DMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAREA 289 D RI E P V ALRFT ARA+IV AGGEC+T DQLA+RAP G+NT++LRGP+N+REA Sbjct: 90 DARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREA 149 Query: 288 VRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 169 VRHFG PH P + S GRKFE+ARGRR S+GFKV Sbjct: 150 VRHFGMG---PHKGKAPRILSTGRKFERARGRRRSKGFKV 186
>RL18_TRYBB (P50885) 60S ribosomal protein L18| Length = 193 Score = 166 bits (420), Expect = 6e-41 Identities = 84/161 (52%), Positives = 120/161 (74%), Gaps = 7/161 (4%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLS-------MRRLSNFMKGKEEKNIAVV 487 +KLY+FL +RT S FN +I KRL S+ NR P+S MRR + ++K ++ IAV+ Sbjct: 30 IKLYKFLGKRTNSPFNKLIHKRLLKSRNNRAPISLSRIAVCMRRRTVWLKKGKKSPIAVI 89 Query: 486 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGP 307 VG + DD+R+ IPA+++ ALRF+++AR RI AGGECLTFDQLA+ APTG+NT+LLRG Sbjct: 90 VGDVLDDVRMTRIPALRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTMLLRGR 149 Query: 306 KNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNS 184 K+ RE+V+HFG A GVP SH KP+V S+G++ +++ RR++ Sbjct: 150 KSGRESVKHFG-AAGVPGSHAKPHVSSRGKERQRSSKRRHA 189
>RL18_SALSA (P24558) 60S ribosomal protein L18| Length = 179 Score = 122 bits (307), Expect = 7e-28 Identities = 70/143 (48%), Positives = 97/143 (67%), Gaps = 3/143 (2%) Frame = -3 Query: 645 VKLYRFLVRR-TKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTI 475 VK+YR + + + FN V+L+RLFMS+T+RPP+S+ R+ MK G+E + AVVVGT+ Sbjct: 27 VKIYRLPGSKCSTAPFNKVVLRRLFMSRTHRPPMSVSRMIRKMKLPGRENRT-AVVVGTV 85 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLRGPKNAR 295 TDD+RI EIP +KV+AL+ T R RI+ + + F LAL AP + ++LL P+NAR Sbjct: 86 TDDVRIHEIPNLKVSALKITRRNRTRILKF-VQIMRFVGLALAAPNRQKSVLLSAPRNAR 144 Query: 294 EAVRHFGKAPGVPHSHTKPYVRS 226 + RHF AP +P HTKPYV S Sbjct: 145 DVSRHFANAPSIP--HTKPYVLS 165
>RL18_PIG (Q95342) 60S ribosomal protein L18 (Fragment)| Length = 103 Score = 96.3 bits (238), Expect = 7e-20 Identities = 52/77 (67%), Positives = 60/77 (77%), Gaps = 2/77 (2%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMK--GKEEKNIAVVVGTIT 472 VKL RFL RRT S FN V+LKRLFMS+TNRPPLS+ R+ MK G+E K AVVVGTIT Sbjct: 28 VKLXRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMXRKMKLPGREGKT-AVVVGTIT 86 Query: 471 DDMRIQEIPAMKVTALR 421 DD+R QE+P +KV ALR Sbjct: 87 DDVRFQEVPKLKVCALR 103
>RL18E_PYRAB (Q9V197) 50S ribosomal protein L18e| Length = 120 Score = 47.8 bits (112), Expect = 3e-05 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 3/112 (2%) Frame = -3 Query: 642 KLYRFLVRRT---KSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTIT 472 +L R+L +++ K K I RL + R +++ R++ + K + ++ VV G++ Sbjct: 13 RLIRYLRKKSNEEKVKIWKDIAWRLERPRRQRAEVNVSRINRYAK---DGDMIVVPGSVL 69 Query: 471 DDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 316 +I++ + V A +F+ETAR +I AGGE +T ++L R P G I++ Sbjct: 70 GAGKIEK--KVIVAAWKFSETARRKIEEAGGEAITIEELIKRNPKGSGVIIM 119
>RL18E_PYRKO (Q5JJF5) 50S ribosomal protein L18e| Length = 121 Score = 46.6 bits (109), Expect = 6e-05 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 7/113 (6%) Frame = -3 Query: 633 RFLVRRTKSKFNAVILK-------RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTI 475 R L+R + K N +K RL + R +++ +++ + K E ++ +V G++ Sbjct: 13 RRLIRTLRKKSNEEGVKIWKDIAWRLERPRRQRAEVNISKINRYTK---EGDVVIVPGSV 69 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 316 R++ + V A +F+E AR +I+ AGGE ++ ++L R P G I++ Sbjct: 70 LGAGRLEH--KVVVAAWKFSEAARRKIIEAGGEAISIEELMERNPKGSGVIIM 120
>RL18E_PYRHO (O59302) 50S ribosomal protein L18e| Length = 120 Score = 46.2 bits (108), Expect = 8e-05 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 7/113 (6%) Frame = -3 Query: 633 RFLVRRTKSKFNAVILK-------RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTI 475 R L+R K K N +K RL + R +++ +++ + K + ++ VV G++ Sbjct: 12 RRLIRFLKKKSNEEGVKIWKDLAWRLERPRRQRAEVNVSKINRYAK---DGDMIVVPGSV 68 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 316 ++++ + V A +F+ETAR +I AGGE +T ++L R P G I++ Sbjct: 69 LGAGKLEK--KVIVAAWKFSETARKKITEAGGEAITIEELIERNPKGSGVIIM 119
>RL18E_PYRFU (Q8U0E5) 50S ribosomal protein L18e| Length = 120 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 4/113 (3%) Frame = -3 Query: 642 KLYRFLVRRTKSKFNAVILK----RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTI 475 +L R+L R+ +++ I K RL + R +++ +++ + E + VV G++ Sbjct: 13 RLIRYL-RKKSNEYGVKIWKDVAWRLERPRRQRAEVNVSKINRYANDGE---MIVVPGSV 68 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 316 ++++ + V A +F+ETAR +I+ AGGE +T ++L R PTG ++ Sbjct: 69 LGAGKLEK--KVIVAAWKFSETARRKIIEAGGEAITIEELIERNPTGSGVRIM 119
>RL18E_METJA (P54022) 50S ribosomal protein L18e| Length = 121 Score = 44.3 bits (103), Expect = 3e-04 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 3/113 (2%) Frame = -3 Query: 645 VKLYRFLVR---RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTI 475 VKL L + + ++K I +RL + R +++ +++ + K E ++ +V G + Sbjct: 13 VKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTK---EGDVVLVPGKV 69 Query: 474 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 316 +++ + V A F+ETA+ I AGGE +T ++L R P G N ++ Sbjct: 70 LGAGKLEH--KVVVAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIM 120
>RL18E_METTH (O26145) 50S ribosomal protein L18e| Length = 121 Score = 43.5 bits (101), Expect = 5e-04 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 6/112 (5%) Frame = -3 Query: 645 VKLYRFLVRRTKSKFNAV---ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAV---VV 484 +KL R L +++ + A+ + +RL NR +++ +++ E++ + V V+ Sbjct: 13 IKLIRNLRKKSSQEGAAIWKDVARRLERPTRNRAAVNISKINRH--SDEDETVLVPGKVL 70 Query: 483 GTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGEN 328 G+ D R+Q V AL F++TAR +I AGGECLT ++ P +N Sbjct: 71 GSGNLDHRVQ------VVALSFSQTARDKIERAGGECLTLGKIVEENPAIKN 116
>RL18E_METKA (Q8TVB7) 50S ribosomal protein L18e| Length = 127 Score = 42.0 bits (97), Expect = 0.002 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Frame = -3 Query: 642 KLYRFLVRRTKSKFNAVILK----RLFMSKTNRPPLSMRRLSNFMKGK--EEKNIAVVVG 481 KL R L ++ ++NA + + RL + R +++ +L + +E+ +V G Sbjct: 15 KLIRDL-KKAACEYNAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPG 73 Query: 480 TITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTG 334 + D I + ++V A RF+ TAR +I AGGECLT +L P G Sbjct: 74 KVLGDGVITQ--PLRVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>RL18E_ARCFU (O29138) 50S ribosomal protein L18e| Length = 117 Score = 35.8 bits (81), Expect = 0.11 Identities = 24/92 (26%), Positives = 44/92 (47%) Frame = -3 Query: 591 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 412 + +RL + + +++ ++ + K E VV G + I + +KV AL F+E Sbjct: 30 VAERLAKPRRLQAEVNVSKIEKYAKPNE---YVVVPGKVLGSGSITK--PVKVAALSFSE 84 Query: 411 TARARIVNAGGECLTFDQLALRAPTGENTILL 316 A ++I AGG C+ ++L P G L+ Sbjct: 85 KAASKIREAGGVCMKIEELLKENPKGSGVRLM 116
>RL18E_METMP (Q6LXM7) 50S ribosomal protein L18e| Length = 120 Score = 35.4 bits (80), Expect = 0.15 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -3 Query: 435 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 316 V A F+ETA++ I GG+CLT ++L P G ++ Sbjct: 80 VAAFSFSETAKSAIEAVGGKCLTIEELIAENPKGSKVTIM 119
>RL18E_METMA (Q8PW46) 50S ribosomal protein L18e| Length = 126 Score = 32.7 bits (73), Expect = 0.95 Identities = 22/93 (23%), Positives = 45/93 (48%) Frame = -3 Query: 591 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 412 I KRL N +++ +++ + E ++ +V G + + + V A+ F+E Sbjct: 39 IAKRLEAPSRNYAAVNISKIN---RHTAENDVLLVPGKVLGAGLLDH--PVTVAAVTFSE 93 Query: 411 TARARIVNAGGECLTFDQLALRAPTGENTILLR 313 +A +I AGG+CL+ +++ P G + R Sbjct: 94 SAVEKITEAGGKCLSVEEIMEANPKGSGIRIFR 126
>MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) Length = 1784 Score = 32.3 bits (72), Expect = 1.2 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Frame = +3 Query: 33 SKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQLKP*SHGCSSYHEPSQ 212 S Y S G C S++ +Y L + ++S+ T Q + S CS + S Sbjct: 1395 SSYDSTMGGSICGNGSSQNSCSYSNLTSSSLTQSSCAVTQQMSNI---SGSCSMLQQTSI 1451 Query: 213 TSYPWSAHRAWCGCAAHQEPCRSA-----------SPPHGHSWVPSTGSCS 332 +S P + ++ GC + P S +PP + +P TG+ + Sbjct: 1452 SSPPTCSVKSPQGCVVERPPSSSQQLAQCSMAANFTPPMQLAEIPETGNAN 1502
>RL18E_THEAC (Q9HL06) 50S ribosomal protein L18e| Length = 120 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/103 (23%), Positives = 50/103 (48%) Frame = -3 Query: 621 RRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPA 442 R + SK I +RL + +++ ++ + K + +I VV G + +I + Sbjct: 23 RESGSKLWRDIAERLASRRRGYASVNLSKIDKYAK---DGDIIVVPGYVLGVGKISK--K 77 Query: 441 MKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLR 313 + V A +F++TA ++ N+G + ++A P G N ++R Sbjct: 78 VTVGAYKFSKTAMEKLSNSGCAFMNISEIAKDNPKGTNVKIMR 120
>RL18E_METAC (Q8TT44) 50S ribosomal protein L18e| Length = 126 Score = 32.0 bits (71), Expect = 1.6 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -3 Query: 435 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLR 313 + AL F+++A +I AGG+CL+ +++ P G + R Sbjct: 86 IAALTFSDSAFEKITEAGGKCLSLEEIMEANPKGSGIRIFR 126
>MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 466 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Frame = -3 Query: 411 TARARIVNAGGECLTFDQ----LALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHT 244 TARA ++ G + L +D +A A TG T LRG A+ + F +PGVP +H Sbjct: 24 TARA-LIEGGAQVLAWDDNPDSVAKAAATGIATADLRGADWAKFSA--FVLSPGVPLTHP 80 Query: 243 KPY 235 KP+ Sbjct: 81 KPH 83
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/82 (31%), Positives = 35/82 (42%) Frame = +3 Query: 150 NQKGQLKP*SHGCSSYHEPSQTSYPWSAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGSC 329 N KG KP P+ S P S + AA P R ASP H P+ G+ Sbjct: 54 NAKGDSKP-----VQQRRPAAPSAPASTSSSAPTPAA---PARQASPASAHQQAPTPGAP 105 Query: 330 SPQLEHGEQAGQK*GTPHQH*Q 395 +P+ + G + G TP +H Q Sbjct: 106 TPRPQGGARPGMP--TPGRHGQ 125
>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6| (Ubiquitin-conjugating BIR-domain enzyme apollon) Length = 4829 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = -2 Query: 622 EEDQEQVQRRHPQEALHEQDQPPAALHAPSLQL 524 E QEQ QRRHPQ LH+Q AA H + +L Sbjct: 1020 EVQQEQQQRRHPQH-LHQQHHGDAAQHTRTWKL 1051
>HOXV_AZOVI (P40597) Hydrogenase expression/formation protein hoxV| Length = 348 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = +2 Query: 170 TLKPRLFLLPRAFSNFLPLERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGAR 349 +++ L L + + +PLER L+ LC A + LTA RA P + + + A Sbjct: 95 SIRESLLRLVQVWELPVPLERLKALLALCRRAAARLQALTAFRAAPLPADAELEGTLAAL 154 Query: 350 RASWSKVRHSPPA 388 A+W+ ++ PA Sbjct: 155 AAAWADLQPPAPA 167
>MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Querkopf protein) Length = 1872 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/83 (25%), Positives = 35/83 (42%) Frame = +3 Query: 33 SKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQLKP*SHGCSSYHEPSQ 212 S Y S G C S++ +Y L N ++++ T Q + S CS + S Sbjct: 1483 SSYDSTMGGSICGNGSSQNSCSYSSLTSSNLTQNSCAVTQQMSNI---SGSCSMLQQTSI 1539 Query: 213 TSYPWSAHRAWCGCAAHQEPCRS 281 +S P + ++ GC + P S Sbjct: 1540 SSPPTCSVKSPQGCVVERPPSSS 1562
>RL18E_PYRAE (Q8ZYQ2) 50S ribosomal protein L18e| Length = 122 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Frame = -3 Query: 639 LYRFLVRRTKSKFNAVILKRL---FMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITD 469 L RFL R ++ N+ + R+ F+ K R + + + + +E ++ VV G + Sbjct: 16 LARFL--RKAARANSASIWRVVAEFVEKPRRQRVIVN-VGKLNRVAKEGDVVVVPGKLLA 72 Query: 468 DMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTG 334 ++ + + V A++ + A +++ AGGE LT +L + P G Sbjct: 73 GGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRG 115
>HUPK_AZOVI (P31878) Hydrogenase expression/formation protein hupK| Length = 342 Score = 30.8 bits (68), Expect = 3.6 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = +2 Query: 170 TLKPRLFLLPRAFSNFLPLERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGAR 349 +++ L L + + +PLER L+ LC A + LTA RA P + + + A Sbjct: 89 SIRESLLRLVQVWELPVPLERLKALLALCRRAAARLQALTAFRAAPLPADAELEGTLAAL 148 Query: 350 RASWSKVRHSPPA 388 A+W+ ++ PA Sbjct: 149 AAAWADLQPPAPA 161
>AMPA_CLOPE (Q8XHI3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 493 Score = 30.4 bits (67), Expect = 4.7 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Frame = -3 Query: 639 LYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIA---VVVGTITD 469 +Y FLV+++K +L F KTN P + N +K KE+ + + T T Sbjct: 1 MYNFLVKKSKCTETDALLIPYFEEKTNIPNEEINNKINILKKKEQFKGSYGEIFNITRTT 60 Query: 468 DMRIQEIPAMKVTALRFTETARARIVNAGGECL 370 D IQ+I + + + TE + +I A G+ + Sbjct: 61 DDNIQDIILLGLG--KETEITKEKIRRAFGKAV 91
>NPDC1_MOUSE (Q64322) Neural proliferation differentiation and control protein 1| precursor (NPDC-1 protein) Length = 332 Score = 30.0 bits (66), Expect = 6.2 Identities = 24/86 (27%), Positives = 32/86 (37%) Frame = +2 Query: 239 GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILALAVSV 418 GL GT +P +SRA GP+ P G RH +L LA + Sbjct: 149 GLPSTHGTSSPIPHTSLSSRASSGPVQMSPLEPQG---------RHGNGLTLVLILAFCL 199 Query: 419 NLRAVTFIAGISWIRMSSVIVPTTTA 496 A +A + W R+ I T A Sbjct: 200 ASSAALAVAALCWCRLQREIRLTQKA 225
>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Histone acetyltransferase MOZ2) (Monocytic leukemia zinc finger protein-related factor) (Histone acetyltransferas Length = 2073 Score = 30.0 bits (66), Expect = 6.2 Identities = 21/83 (25%), Positives = 35/83 (42%) Frame = +3 Query: 33 SKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQLKP*SHGCSSYHEPSQ 212 S Y S G C S++ +Y L + ++S+ T Q + S CS + S Sbjct: 1684 SSYDSTMGGSICGNGSSQNSCSYSNLTSSSLTQSSCAVTQQMSNI---SGSCSMLQQTSI 1740 Query: 213 TSYPWSAHRAWCGCAAHQEPCRS 281 +S P + ++ GC + P S Sbjct: 1741 SSPPTCSVKSPQGCVVERPPSSS 1763
>PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101| Length = 618 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +3 Query: 249 GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQA 359 G A P S S GHS PS+ + SPQ HG A Sbjct: 416 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 452
>GYRB_MYXXA (O33367) DNA gyrase subunit B (EC 5.99.1.3)| Length = 815 Score = 29.6 bits (65), Expect = 8.0 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Frame = +3 Query: 165 LKP*SHGCSSYHEPSQTSY---PWSAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGSCSP 335 + P S C + TS+ P + R+WC EPC ST SC Sbjct: 644 MTPSSAACRTCWAACATSWCRTPSTTPRSWCSTPTRMEPCGRRCSTTPSCRRRSTWSCRL 703 Query: 336 QLEHGEQAGQ 365 EH AGQ Sbjct: 704 CAEHLRGAGQ 713
>TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit TIM50,| mitochondrial precursor Length = 466 Score = 29.6 bits (65), Expect = 8.0 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -3 Query: 312 GPKNAREAVRHFGKAPGVPHSHTKP 238 GPKN EAV G P VP T+P Sbjct: 440 GPKNLSEAVSSIGSLPPVPQQPTEP 464
>PHYK_MAIZE (Q2N2K4) Probable phytol kinase, chloroplast precursor (EC 2.7.-.-)| Length = 303 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 228 SAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGS 326 +A AW G A+ S SPPH + PS GS Sbjct: 2 AAAAAWTGAASPNSLLLSRSPPHAAALAPSPGS 34
>PHYK2_SOYBN (Q2N2K2) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) Length = 292 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 228 SAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGS 326 +A AW G A+ S SPPH + PS GS Sbjct: 2 AAAAAWTGAASPNSLLLSRSPPHAAALAPSPGS 34
>PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101| Length = 613 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +3 Query: 249 GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQA 359 G A P S S GHS PS+ + SPQ HG A Sbjct: 411 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 447 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,096,246 Number of Sequences: 219361 Number of extensions: 1870376 Number of successful extensions: 6549 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 6105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6510 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
