| Clone Name | rbaal10m12 |
|---|---|
| Clone Library Name | barley_pub |
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 140 bits (353), Expect = 7e-34 Identities = 64/92 (69%), Positives = 73/92 (79%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGKLN QRI LT+N ++D+ LGKH IIC+EDL+HEI+TVGP FKEANNFLWPF Sbjct: 151 RGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAP 210 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 KRNHY EGG AGNREN+IN+LVRRMN Sbjct: 211 LGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 139 bits (350), Expect = 2e-33 Identities = 63/92 (68%), Positives = 73/92 (79%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GKLN QR LT+N ++D+GLGKH IIC+EDL+HEI+TVGP FKEANNFLWPF Sbjct: 153 RGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAP 212 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 KRNHY EGG AGNREN+IN+LVRRMN Sbjct: 213 LGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 137 bits (346), Expect = 5e-33 Identities = 63/92 (68%), Positives = 72/92 (78%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGKLN QRI LT+N ++++ LGKH IIC EDL+HEILTVGP FKEANNFLWPF Sbjct: 151 RGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAP 210 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 KRNHY EGG AGNREN+IN+L+RRMN Sbjct: 211 LGGLKKKRNHYVEGGDAGNRENFINELIRRMN 242
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 118 bits (296), Expect = 3e-27 Identities = 56/92 (60%), Positives = 67/92 (72%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NK+RI LT+N +I LGK+ IIC+EDL+HEI TVG FKEANNFLWPF Sbjct: 157 RGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 216 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 K H+ EGG AGNRE+ IN+L+RRMN Sbjct: 217 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 118 bits (296), Expect = 3e-27 Identities = 56/92 (60%), Positives = 67/92 (72%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NK+RI LT+N +I LGK+ IIC+EDL+HEI TVG FKEANNFLWPF Sbjct: 157 RGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 216 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 K H+ EGG AGNRE+ IN+L+RRMN Sbjct: 217 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 248
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 117 bits (294), Expect = 5e-27 Identities = 56/92 (60%), Positives = 66/92 (71%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NK+RI LT+N +I LGK IIC+EDL+HEI TVG FKEANNFLWPF Sbjct: 179 RGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 238 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 K H+ EGG AGNRE+ IN+L+RRMN Sbjct: 239 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 117 bits (293), Expect = 7e-27 Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NKQR+ LT+N +I+E LGK+ IIC+EDL+HEI TVGP FK+A+NFLWPF Sbjct: 156 RGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNP 215 Query: 208 XXXXXXKR-NHYXEGGXAGNRENYINQLVRRMN 113 ++ H+ EGG GNRE +IN L+R+MN Sbjct: 216 TGGFRTRKFKHFIEGGDLGNREEHINALIRQMN 248
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 117 bits (293), Expect = 7e-27 Identities = 55/92 (59%), Positives = 66/92 (71%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NK+RI LT+N ++ LGK IIC+EDL+HEI TVG FKEANNFLWPF Sbjct: 169 RGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSP 228 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 K H+ EGG AGNRE+ IN+L+RRMN Sbjct: 229 RGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 260
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 116 bits (290), Expect = 1e-26 Identities = 54/94 (57%), Positives = 67/94 (71%), Gaps = 2/94 (2%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NKQRIPL++N +I+E LGK+ IIC+EDL+HEI TVGP FK+A+NFLWPF Sbjct: 157 RGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQASNFLWPFKLSNP 216 Query: 208 XXXXXXKR--NHYXEGGXAGNRENYINQLVRRMN 113 +R HY EGG GNRE IN L++ N Sbjct: 217 SGGWGVRRKFKHYIEGGSTGNREENINALIKAQN 250
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 111 bits (278), Expect = 4e-25 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 2/94 (2%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+NKQR+PL++N +I+ LGK+ I+ I+DL+HEI+TVGP FK+ANNFLWPF Sbjct: 150 RGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNP 209 Query: 208 XXXXXXKR--NHYXEGGXAGNRENYINQLVRRMN 113 R H+ +GG GNRE +IN+LV+ MN Sbjct: 210 SGGWGVPRKFKHFIQGGSFGNREEFINKLVKAMN 243
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 111 bits (278), Expect = 4e-25 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 2/94 (2%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+NKQR+PL++N +I+ LGK+ I+ I+DL+HEI+TVGP FK+ANNFLWPF Sbjct: 150 RGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQANNFLWPFKLSNP 209 Query: 208 XXXXXXKR--NHYXEGGXAGNRENYINQLVRRMN 113 R H+ +GG GNRE +IN+LV+ MN Sbjct: 210 SGGWGVPRKFKHFIQGGSFGNREEFINKLVKSMN 243
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 111 bits (278), Expect = 4e-25 Identities = 50/91 (54%), Positives = 64/91 (70%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGY K++ R+P+T+N ++++ LGK NIIC+EDL HEI TVGP FKEA NFLWPF Sbjct: 153 RGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEATNFLWPFKLNNP 212 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRM 116 K NH+ EGG GNRE+ IN L+R+M Sbjct: 213 TGGWTKKTNHFVEGGDFGNREDQINNLLRKM 243
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 110 bits (275), Expect = 8e-25 Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 2/94 (2%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RGYGK+NKQRI L+ N +++ LGK+ II ++DL+HEI+TVGP FK+ANNFLWPF Sbjct: 150 RGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEIITVGPHFKQANNFLWPFKLSNP 209 Query: 208 XXXXXXKR--NHYXEGGXAGNRENYINQLVRRMN 113 R H+ +GG GNRE +IN+LV+ MN Sbjct: 210 SGGWGVPRKFKHFIQGGAFGNREEFINKLVKSMN 243
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 107 bits (268), Expect = 5e-24 Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 1/93 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+NKQRI L++N +I+ LGK+ I+ IEDL+HEI TVGP FK+ANNFLWPF Sbjct: 149 RGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPNFKQANNFLWPFKLSNP 208 Query: 208 XXXXXXKR-NHYXEGGXAGNRENYINQLVRRMN 113 ++ H+ +GG GNRE +IN LV++MN Sbjct: 209 NGGFRTRKFFHFIQGGDTGNREEFINALVKQMN 241
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 106 bits (265), Expect = 1e-23 Identities = 49/94 (52%), Positives = 66/94 (70%), Gaps = 2/94 (2%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+NKQRI L++N +++ LGK I+ I+DL+HEI+TVGP FK+ANNFLWPF Sbjct: 151 RGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNP 210 Query: 208 XXXXXXKR--NHYXEGGXAGNRENYINQLVRRMN 113 R H+ +GG GNRE +IN+LV+ MN Sbjct: 211 SGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 104 bits (260), Expect = 4e-23 Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 1/92 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+NKQRIPL++N +I+ LGK++I+ +EDL+HEI TVGP FK+A NFLWPF Sbjct: 158 RGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSP 217 Query: 208 XXXXXXKR-NHYXEGGXAGNRENYINQLVRRM 116 ++ H+ EGG AG R+ +IN LV++M Sbjct: 218 LGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 103 bits (257), Expect = 1e-22 Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 1/92 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+NKQRI L++N +I+ LGK++I+ IEDL+HEI TVGP FK+A NF+WPF Sbjct: 159 RGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQAANFIWPFQLSSP 218 Query: 208 XXXXXXKR-NHYXEGGXAGNRENYINQLVRRM 116 ++ H+ EGG AG R+ +IN LVR+M Sbjct: 219 LGGWRDRKFKHFIEGGDAGKRDEHINSLVRKM 250
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 100 bits (249), Expect = 8e-22 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 1/92 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGK-HNIICIEDLVHEILTVGPXFKEANNFLWPFXXXX 212 RG+ K N+QR+P+T+N VI+ L + H I C+EDLVHEI TVGP FK A+NFLWPF Sbjct: 160 RGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLWPFKLNT 219 Query: 211 XXXXXXXKRNHYXEGGXAGNRENYINQLVRRM 116 K NHY GG GNRE+ IN+L+R+M Sbjct: 220 PTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 97.4 bits (241), Expect = 7e-21 Identities = 45/92 (48%), Positives = 62/92 (67%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+ K++ QRIPLT+N ++++ LGK IIC+ED++HEI T G FK+ NN LWPF Sbjct: 154 RGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQVNNSLWPFKLNCP 213 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 K+ + +GG AGNRE+ IN L+ RMN Sbjct: 214 RGGFNMKKTPFLQGGDAGNREHLINNLIHRMN 245
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 84.3 bits (207), Expect = 6e-17 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 1/91 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG+GK+N QRI L++N +I+E LGK+++I IED++HEI VG FKE FLWPF Sbjct: 157 RGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPV 216 Query: 208 XXXXXXKR-NHYXEGGXAGNRENYINQLVRR 119 K+ H+ EG AG IN+L+++ Sbjct: 217 KHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 75.5 bits (184), Expect = 3e-14 Identities = 39/92 (42%), Positives = 52/92 (56%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG K+ + IPLT+N VI+E LGK +IC+EDL+HEI G F+E + FL PF Sbjct: 155 RGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVA 214 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 + E G G R INQL+R++N Sbjct: 215 RHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 75.1 bits (183), Expect = 4e-14 Identities = 39/92 (42%), Positives = 52/92 (56%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 RG K+ + IPLT+N VI+E LGK +IC+EDL+HEI G F+E + FL PF Sbjct: 155 RGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFHLSVA 214 Query: 208 XXXXXXKRNHYXEGGXAGNRENYINQLVRRMN 113 + E G G R INQL+R++N Sbjct: 215 RHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein| L7-like) Length = 322 Score = 57.4 bits (137), Expect = 8e-09 Identities = 24/55 (43%), Positives = 34/55 (61%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPF 224 +G + I L +N +++E LG H IIC+ED++HEI T+G F N FL PF Sbjct: 217 KGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271
>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7| Length = 239 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = -1 Query: 388 RGYGKLNKQRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPFXXXXX 209 +G G+ R+ LTN + D GK I CIE+LVH I FK+ N+FL+PF Sbjct: 149 KGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPP 206 Query: 208 XXXXXXKRN-HYXEGGXAGNRENYINQLVRRM 116 +++ + +GG GN ++ ++ L+ RM Sbjct: 207 RGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7| Length = 293 Score = 51.6 bits (122), Expect = 5e-07 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -1 Query: 352 LTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPF 224 L +N V++E LG +IC+ED++HEI T+G F + N FL PF Sbjct: 200 LNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7| Length = 318 Score = 50.4 bits (119), Expect = 1e-06 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = -1 Query: 364 QRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPF 224 + I L +N +++E LG +ICIED++HEI T+G F + FL PF Sbjct: 221 KEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267
>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7| Length = 317 Score = 50.4 bits (119), Expect = 1e-06 Identities = 21/47 (44%), Positives = 32/47 (68%) Frame = -1 Query: 364 QRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPF 224 + I L +N +++E LG +ICI+D++HEI T+G F + N FL PF Sbjct: 220 KEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266
>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)| Length = 212 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = -1 Query: 364 QRIPLTNNKVIDEGLGKHNIICIEDLVHEILTVGPXFKEANNFLWPF 224 +++ L +N +++E LG IICIED++HE + FK +FL PF Sbjct: 116 RQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162
>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7| Length = 275 Score = 44.3 bits (103), Expect = 7e-05 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Frame = -1 Query: 352 LTNNKVIDEGLGKH-NIICIEDLVHEILTVGPXFKEANNFLWPF 224 L NN V+++ G ICIEDL+HE+ T+G FK +N++ PF Sbjct: 183 LDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226
>CSN12_NEUCR (Q7SD63) COP9 signalosome complex subunit 12| Length = 461 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +3 Query: 246 ASLKXGPTVKISCTRSSMQMMLCFPKPSSITLLLVKGILCLL 371 ASL +S R M + FPK +T +G+LC L Sbjct: 220 ASLSKNILKTLSAYRGDMPPLSAFPKSQQVTFKYYEGVLCFL 261
>RL30_PYRHO (O59440) 50S ribosomal protein L30P| Length = 155 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = -1 Query: 376 KLNKQRIPLTNNKVIDEGLGKHNI-ICIEDLVHEILTVGPXFKEANNFLWPFXXXXXXXX 200 KL ++R L NK + + K + + IE+ +++ K+ N F Sbjct: 66 KLIRKRGKLIGNKPVTDEYVKEKLGMTIEEFAQKVINGEMSLKDLPNLKPVFRLHPPRGG 125 Query: 199 XXXKRNH-YXEGGXAGNRENYINQLVRRM 116 + + EGG G R IN+L+ RM Sbjct: 126 FKGSKKRSFQEGGALGYRGEKINELIERM 154
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 314 LPQTLIDNFVVGQRDPLLVELSITS 388 LP+TL+D G +DP+LV L + S Sbjct: 254 LPRTLVDFAKAGLQDPVLVRLDVES 278
>EGFR_MOUSE (Q01279) Epidermal growth factor receptor precursor (EC 2.7.10.1)| Length = 1210 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 290 VLDADDVVLPQTLIDNFVVGQRDPLLVELSITS 388 V+DAD+ ++PQ N R PLL LS TS Sbjct: 1012 VVDADEYLIPQQGFFNSPSTSRTPLLSSLSATS 1044
>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)| Length = 155 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = -1 Query: 376 KLNKQRIPLTNNKVIDEGLGKHNI-ICIEDLVHEILTVGPXFKEANNFLWPFXXXXXXXX 200 KL ++R L NK + + K + + IE+ +++ K+ N F Sbjct: 66 KLIRKRGRLIGNKPVTDEYVKEKLGMTIEEFAQKVVNGEMSLKDLPNLKPVFRLHPPRGG 125 Query: 199 XXXKRNH-YXEGGXAGNRENYINQLVRRM 116 + + EGG G R IN+L+ RM Sbjct: 126 FRGSKKRSFKEGGALGYRGEKINELIERM 154
>TBCE_RAT (Q5FVQ9) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 524 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +3 Query: 267 TVKISCTRSSMQMMLCFPKPSSITLLLVKGILCLL 371 T+KI C+ Q +L P S+T+ VKG+L L Sbjct: 444 TLKIKCSNQPEQQILEKQLPDSMTIQKVKGLLSRL 478
>SYPM_HUMAN (Q7L3T8) Probable prolyl-tRNA synthetase, mitochondrial precursor| (EC 6.1.1.15) (Proline--tRNA ligase) (ProRS) Length = 475 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 313 HNIICIEDLVHEILTVGPXFKEANNFLWPF 224 H + ++D H LT+G K+AN F +PF Sbjct: 405 HGEVLLDDRTH--LTIGNRLKDANKFGYPF 432
>VILL_HUMAN (O15195) Villin-like protein| Length = 856 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -1 Query: 379 GKLNKQRIPLTNNKVIDEGLGKHNIICIEDL 287 GKL+ Q +++D+G GK + CI+DL Sbjct: 371 GKLHTQPKLAAQLRMVDDGSGKVEVWCIQDL 401 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,872,853 Number of Sequences: 219361 Number of extensions: 834650 Number of successful extensions: 2419 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2408 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)