Clone Name	rbaal10m10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_493854.1| Oryza sativa (japonica cultivar-group), mRNA	283	3e-73
2	dbj|AB189043.1| Oryza sativa (indica cultivar-group) OsPRR73 mRN...	283	3e-73
3	dbj|AB189040.1| Oryza sativa (japonica cultivar-group) OsPRR73 m...	283	3e-73
4	dbj|AK121136.1| Oryza sativa (japonica cultivar-group) cDNA clon...	276	8e-71
5	dbj|AK099526.1| Oryza sativa (japonica cultivar-group) cDNA clon...	159	1e-35
6	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	131	3e-27
7	gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom...	131	3e-27
8	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	131	3e-27
9	gb|AY109518.1| Zea mays CL18439_1 mRNA sequence	131	3e-27
10	ref|XM_479630.1| Oryza sativa (japonica cultivar-group), mRNA	107	4e-20
11	dbj|AB189042.1| Oryza sativa (indica cultivar-group) OsPRR37 mRN...	107	4e-20
12	dbj|AB189039.1| Oryza sativa (japonica cultivar-group) OsPRR37 m...	107	4e-20
13	dbj|AK066112.1| Oryza sativa (japonica cultivar-group) cDNA clon...	107	4e-20
14	dbj|AK059514.1| Oryza sativa (japonica cultivar-group) cDNA clon...	107	4e-20
15	gb|AY359964.1| Oryza sativa (indica cultivar-group) pseudo-respo...	98	4e-17
16	dbj|AB243684.1| Lemna gibba LgPRRH37 mRNA for pseudo-response re...	96	2e-16
17	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	88	4e-14
18	dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D...	88	4e-14
19	ref|NM_120359.2| Arabidopsis thaliana APRR7 (PSEUDO-RESPONSE REG...	72	2e-09
20	gb|AY142560.1| Arabidopsis thaliana unknown protein (At5g02810) ...	72	2e-09
21	gb|AY039943.1| Arabidopsis thaliana unknown protein (At5g02810) ...	72	2e-09
22	dbj|AB046954.1| Arabidopsis thaliana APRR7 mRNA for pseudo-respo...	72	2e-09
23	gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ...	66	2e-07
24	gb|AY970705.1| Hordeum vulgare subsp. spontaneum pseudo-response...	66	2e-07
25	gb|AY970704.1| Hordeum vulgare subsp. vulgare cultivar Triumph p...	66	2e-07
26	gb|AY970703.1| Hordeum vulgare cultivar Golden Promise pseudo-re...	66	2e-07
27	gb|AY970702.1| Hordeum vulgare subsp. vulgare cultivar Optic pse...	66	2e-07
28	gb|AY970701.1| Hordeum vulgare subsp. vulgare cultivar Igri pseu...	66	2e-07
29	dbj|AB243681.1| Lemna paucicostata LpPRRH37 mRNA for pseudo-resp...	64	6e-07
30	emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BA...	58	4e-05
31	ref|XM_776031.1| PREDICTED: Strongylocentrotus purpuratus simila...	48	0.036
32	gb|AC182673.2| Populus trichocarpa clone Pop1-26A1, complete seq...	44	0.56
33	emb|AL021127.2|MMCMX137 Mus musculus chromosome X contigA; putat...	44	0.56
34	emb|BX813330.7| Mouse DNA sequence from clone RP23-11C16 on chro...	44	0.56
35	gb|AY611028.1| Castanea sativa timing of CAB expression 1 protei...	44	0.56
36	emb|AL136329.1|MM303011 Mus musculus chromosome X, clone RP21-30...	44	0.56
37	ref|XM_526051.1| PREDICTED: Pan troglodytes similar to F-box pro...	42	2.2
38	gb|DQ452068.1| Homo sapiens lipoprotein, Lp(a) (LPA) gene, compl...	42	2.2
39	gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, ...	42	2.2
40	emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chr...	42	2.2
41	emb|AL713641.1|HSM802963 Homo sapiens genomic DNA; cDNA DKFZp761...	42	2.2
42	gb|AC114941.2| Homo sapiens chromosome 5 clone CTD-2287M17, comp...	42	2.2
43	gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, compl...	42	2.2
44	dbj|AK035970.1| Mus musculus 16 days neonate cerebellum cDNA, RI...	42	2.2
45	dbj|AK045398.1| Mus musculus adult male corpora quadrigemina cDN...	42	2.2
46	gb|AC013459.9| Homo sapiens BAC clone RP11-169L20 from 2, comple...	42	2.2
47	ref|NM_173755.3| Mus musculus ubiquitin-conjugating enzyme E2O (...	42	2.2
48	dbj|AK129431.1| Mus musculus mRNA for mKIAA1734 protein	42	2.2
49	gb|BC023329.1| Mus musculus ubiquitin-conjugating enzyme E2O, mR...	42	2.2
50	gb|BC059193.1| Mus musculus ubiquitin-conjugating enzyme E2O, mR...	42	2.2
51	gb|BC051108.1| Mus musculus ubiquitin-conjugating enzyme E2O, mR...	42	2.2
52	gb|BC055067.1| Mus musculus ubiquitin-conjugating enzyme E2O, mR...	42	2.2
53	gb|BC039233.1| Mus musculus ubiquitin-conjugating enzyme E2O, mR...	42	2.2
54	emb|AL645851.8| Mouse DNA sequence from clone RP23-193A16 on chr...	42	2.2
55	emb|CT030077.2| Xenopus tropicalis finished cDNA, clone TEgg100a05	40	8.7
56	gb|AC147148.2| Pan troglodytes BAC clone CH251-267E22 from Y, co...	40	8.7
57	gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosom...	40	8.7
58	emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chr...	40	8.7
59	gb|AC069233.16| Homo sapiens 3 BAC RP11-95H16 (Roswell Park Canc...	40	8.7
60	emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome	40	8.7
61	dbj|BS000668.1| Pan troglodytes chromosome Y clone:PTFY-015J14, ...	40	8.7
62	gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence	40	8.7
63	gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, comp...	40	8.7
64	gb|AC093556.2| Homo sapiens chromosome 3 clone RP11-48E21, compl...	40	8.7
65	dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome	40	8.7
66	gb|AY371288.1| Mesembryanthemum crystallinum timing of CAB expre...	40	8.7
67	gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B ...	40	8.7
68	gb|AF020503.1|AF020503 Homo sapiens FRA3B common fragile region,...	40	8.7

---

>ref|XM_493854.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2925

 Score =  283 bits (143), Expect = 3e-73
 Identities = 335/398 (84%), Gaps = 7/398 (1%)
 Strand = Plus / Minus

                                                                       
Query: 245 ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
           ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 698 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 639

                                                                       
Query: 305 ctttcacttccactg------gaactgtggcatctcctccatatgtgctgccaaagggtc 358
           ||||| |||||||||      |||||||||||||  ||||| |  |||||||||||| ||
Sbjct: 638 ctttcgcttccactgccactggaactgtggcatcgtctccaaacatgctgccaaaggttc 579

                                                                       
Query: 359 ttaagttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacac 418
           |||||||||||||| | ||| ||||||||||  |||||||||||||| ||||| | ||||
Sbjct: 578 ttaagttcattcttacgtataggcttcactagaaagtcaactgctccttttgacaaacac 519

                                                                       
Query: 419 ttaaagactgtactcattgagtcattcttagacatcatgatcacaggaatgcccttacaa 478
           ||||||||||||| |||||||||||||  ||||||||| ||||| |||||  |||| |||
Sbjct: 518 ttaaagactgtacccattgagtcattcgaagacatcataatcacgggaatatccttgcaa 459

                                                                       
Query: 479 atactgtgactcgtgatcttactgagcagaccaatgccagatagacaaggcatggcgacc 538
           ||  |||| || ||||||||||| ||||||||||||||||| ||||  |||||  ||| |
Sbjct: 458 attttgtggcttgtgatcttactaagcagaccaatgccagacagacgtggcattacga-c 400

                                                                       
Query: 539 ctcagttaatacaaggtcaatacggttttgcacatcttcaagatattgccatgcatccaa 598
           ||| || ||||||||||||||  ||||||||| |||||||||| ||||||||||||  | 
Sbjct: 399 ctcggtcaatacaaggtcaatgtggttttgcagatcttcaagacattgccatgcatgtag 340

                                                 
Query: 599 tccattctcagcagagataacttcatagccacacttac 636
            ||||| ||||||| |||||||||||| | ||||||||
Sbjct: 339 cccattttcagcagggataacttcataacaacacttac 302



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/149 (84%), Gaps = 3/149 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
            |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 1018 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 959

                                                                        
Query: 59   aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
            |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 958  aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 900

                                         
Query: 119  tccacagcacgcttcgtccatgaactctg 147
            ||||| |||||||| ||||||||||||||
Sbjct: 899  tccactgcacgctttgtccatgaactctg 871



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 146 tgagtgccactgccattatcactgccatccctagcattgggcccaacact 195
           ||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 806 tgagtgccactgccattatcactgccatccctagcgttgtgtccaacact 757

---

>dbj|AB189043.1| Oryza sativa (indica cultivar-group) OsPRR73 mRNA for
           pseudo-response regulator 73, complete cds
          Length = 2304

 Score =  283 bits (143), Expect = 3e-73
 Identities = 335/398 (84%), Gaps = 7/398 (1%)
 Strand = Plus / Minus

                                                                       
Query: 245 ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
           ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 698 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 639

                                                                       
Query: 305 ctttcacttccactg------gaactgtggcatctcctccatatgtgctgccaaagggtc 358
           ||||| |||||||||      |||||||||||||  ||||| |  |||||||||||| ||
Sbjct: 638 ctttcgcttccactgccactggaactgtggcatcgtctccaaacatgctgccaaaggttc 579

                                                                       
Query: 359 ttaagttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacac 418
           |||||||||||||| | ||| ||||||||||  |||||||||||||| ||||| | ||||
Sbjct: 578 ttaagttcattcttacgtataggcttcactagaaagtcaactgctccttttgacaaacac 519

                                                                       
Query: 419 ttaaagactgtactcattgagtcattcttagacatcatgatcacaggaatgcccttacaa 478
           ||||||||||||| |||||||||||||  ||||||||| ||||| |||||  |||| |||
Sbjct: 518 ttaaagactgtacccattgagtcattcgaagacatcataatcacgggaatatccttgcaa 459

                                                                       
Query: 479 atactgtgactcgtgatcttactgagcagaccaatgccagatagacaaggcatggcgacc 538
           ||  |||| || ||||||||||| ||||||||||||||||| ||||  |||||  ||| |
Sbjct: 458 attttgtggcttgtgatcttactaagcagaccaatgccagacagacgtggcattacga-c 400

                                                                       
Query: 539 ctcagttaatacaaggtcaatacggttttgcacatcttcaagatattgccatgcatccaa 598
           ||| || ||||||||||||||  ||||||||| |||||||||| ||||||||||||  | 
Sbjct: 399 ctcggtcaatacaaggtcaatgtggttttgcagatcttcaagacattgccatgcatgtag 340

                                                 
Query: 599 tccattctcagcagagataacttcatagccacacttac 636
            ||||| ||||||| |||||||||||| | ||||||||
Sbjct: 339 cccattttcagcagggataacttcataacaacacttac 302



 Score =  159 bits (80), Expect = 1e-35
 Identities = 170/197 (86%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
           |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 952 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 893

                                                                       
Query: 59  aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
           |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 892 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 834

                                                                       
Query: 119 tccacagcacgcttcgtccatgaactctgagtgccactgccattatcactgccatcccta 178
           ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 833 tccactgcacgctttgtccatgaactttgagtgccactgccattatcactgccatcccta 774

                            
Query: 179 gcattgggcccaacact 195
           || ||| | ||||||||
Sbjct: 773 gcgttgtgtccaacact 757

---

>dbj|AB189040.1| Oryza sativa (japonica cultivar-group) OsPRR73 mRNA for
           pseudo-response regulator 73, complete cds
          Length = 2304

 Score =  283 bits (143), Expect = 3e-73
 Identities = 335/398 (84%), Gaps = 7/398 (1%)
 Strand = Plus / Minus

                                                                       
Query: 245 ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
           ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 698 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 639

                                                                       
Query: 305 ctttcacttccactg------gaactgtggcatctcctccatatgtgctgccaaagggtc 358
           ||||| |||||||||      |||||||||||||  ||||| |  |||||||||||| ||
Sbjct: 638 ctttcgcttccactgccactggaactgtggcatcgtctccaaacatgctgccaaaggttc 579

                                                                       
Query: 359 ttaagttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacac 418
           |||||||||||||| | ||| ||||||||||  |||||||||||||| ||||| | ||||
Sbjct: 578 ttaagttcattcttacgtataggcttcactagaaagtcaactgctccttttgacaaacac 519

                                                                       
Query: 419 ttaaagactgtactcattgagtcattcttagacatcatgatcacaggaatgcccttacaa 478
           ||||||||||||| |||||||||||||  ||||||||| ||||| |||||  |||| |||
Sbjct: 518 ttaaagactgtacccattgagtcattcgaagacatcataatcacgggaatatccttgcaa 459

                                                                       
Query: 479 atactgtgactcgtgatcttactgagcagaccaatgccagatagacaaggcatggcgacc 538
           ||  |||| || ||||||||||| ||||||||||||||||| ||||  |||||  ||| |
Sbjct: 458 attttgtggcttgtgatcttactaagcagaccaatgccagacagacgtggcattacga-c 400

                                                                       
Query: 539 ctcagttaatacaaggtcaatacggttttgcacatcttcaagatattgccatgcatccaa 598
           ||| || ||||||||||||||  ||||||||| |||||||||| ||||||||||||  | 
Sbjct: 399 ctcggtcaatacaaggtcaatgtggttttgcagatcttcaagacattgccatgcatgtag 340

                                                 
Query: 599 tccattctcagcagagataacttcatagccacacttac 636
            ||||| ||||||| |||||||||||| | ||||||||
Sbjct: 339 cccattttcagcagggataacttcataacaacacttac 302



 Score =  159 bits (80), Expect = 1e-35
 Identities = 170/197 (86%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
           |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 952 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 893

                                                                       
Query: 59  aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
           |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 892 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 834

                                                                       
Query: 119 tccacagcacgcttcgtccatgaactctgagtgccactgccattatcactgccatcccta 178
           ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 833 tccactgcacgctttgtccatgaactttgagtgccactgccattatcactgccatcccta 774

                            
Query: 179 gcattgggcccaacact 195
           || ||| | ||||||||
Sbjct: 773 gcgttgtgtccaacact 757

---

>dbj|AK121136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077E22, full
            insert sequence
          Length = 3875

 Score =  276 bits (139), Expect = 8e-71
 Identities = 334/398 (83%), Gaps = 7/398 (1%)
 Strand = Plus / Minus

                                                                        
Query: 245  ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
            ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 1386 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 1327

                                                                        
Query: 305  ctttcacttccactg------gaactgtggcatctcctccatatgtgctgccaaagggtc 358
            ||||| |||||||||      |||||||||||||  ||||| |  |||||||||||| ||
Sbjct: 1326 ctttcgcttccactgccactggaactgtggcatcgtctccaaacatgctgccaaaggttc 1267

                                                                        
Query: 359  ttaagttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacac 418
            |||||||||||||| | ||| |||| |||||  |||||||||||||| ||||| | ||||
Sbjct: 1266 ttaagttcattcttacgtataggctccactagaaagtcaactgctccttttgacaaacac 1207

                                                                        
Query: 419  ttaaagactgtactcattgagtcattcttagacatcatgatcacaggaatgcccttacaa 478
            ||||||||||||| |||||||||||||  ||||||||| ||||| |||||  |||| |||
Sbjct: 1206 ttaaagactgtacccattgagtcattcgaagacatcataatcacgggaatatccttgcaa 1147

                                                                        
Query: 479  atactgtgactcgtgatcttactgagcagaccaatgccagatagacaaggcatggcgacc 538
            ||  |||| || ||||||||||| ||||||||||||||||| ||||  |||||  ||| |
Sbjct: 1146 attttgtggcttgtgatcttactaagcagaccaatgccagacagacgtggcattacga-c 1088

                                                                        
Query: 539  ctcagttaatacaaggtcaatacggttttgcacatcttcaagatattgccatgcatccaa 598
            ||| || ||||||||||||||  ||||||||| |||||||||| ||||||||||||  | 
Sbjct: 1087 ctcggtcaatacaaggtcaatgtggttttgcagatcttcaagacattgccatgcatgtag 1028

                                                  
Query: 599  tccattctcagcagagataacttcatagccacacttac 636
             ||||| ||||||| |||||||||||| | ||||||||
Sbjct: 1027 cccattttcagcagggataacttcataacaacacttac 990



 Score =  151 bits (76), Expect = 3e-33
 Identities = 169/197 (85%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
            |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 1640 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 1581

                                                                        
Query: 59   aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
            |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 1580 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 1522

                                                                        
Query: 119  tccacagcacgcttcgtccatgaactctgagtgccactgccattatcactgccatcccta 178
             |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1521 accactgcacgctttgtccatgaactttgagtgccactgccattatcactgccatcccta 1462

                             
Query: 179  gcattgggcccaacact 195
            || ||| | ||||||||
Sbjct: 1461 gcgttgtgtccaacact 1445

---

>dbj|AK099526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030P09, full
           insert sequence
          Length = 1121

 Score =  159 bits (80), Expect = 1e-35
 Identities = 170/197 (86%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
           |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 423 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 364

                                                                       
Query: 59  aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
           |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 363 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 305

                                                                       
Query: 119 tccacagcacgcttcgtccatgaactctgagtgccactgccattatcactgccatcccta 178
           ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 304 tccactgcacgctttgtccatgaactttgagtgccactgccattatcactgccatcccta 245

                            
Query: 179 gcattgggcccaacact 195
           || ||| | ||||||||
Sbjct: 244 gcgttgtgtccaacact 228



 Score =  119 bits (60), Expect = 1e-23
 Identities = 140/167 (83%), Gaps = 6/167 (3%)
 Strand = Plus / Minus

                                                                       
Query: 245 ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
           ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 169 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 110

                                                                       
Query: 305 ctttcacttccactg------gaactgtggcatctcctccatatgtgctgccaaagggtc 358
           ||||| |||||||||      |||||||||||||  ||||| |  |||||||||||| ||
Sbjct: 109 ctttcgcttccactgccactggaactgtggcatcgtctccaaacatgctgccaaaggttc 50

                                                          
Query: 359 ttaagttcattcttccttatcggcttcactaagaagtcaactgctcc 405
           |||||||||||||| | ||| ||||||||||  ||||||||||||||
Sbjct: 49  ttaagttcattcttacgtataggcttcactagaaagtcaactgctcc 3

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 3e-27
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                           
Query: 322     actgtggcatctcctccatatgtgctgccaaagggtcttaagttcattcttccttatcgg 381
               |||||||||||  ||||| |  |||||||||||| |||||||||||||||| | ||| ||
Sbjct: 9735950 actgtggcatcgtctccaaacatgctgccaaaggttcttaagttcattcttacgtatagg 9736009

                                                                           
Query: 382     cttcactaagaagtcaactgctccctttgatagacacttaaagactgtactcattgagtc 441
               ||||||||  |||||||||||||| ||||| | ||||||||||||||||| |||||||||
Sbjct: 9736010 cttcactagaaagtcaactgctccttttgacaaacacttaaagactgtacccattgagtc 9736069

                             
Query: 442     attcttagacatca 455
               ||||  ||||||||
Sbjct: 9736070 attcgaagacatca 9736083



 Score =  101 bits (51), Expect = 3e-18
 Identities = 136/163 (83%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                           
Query: 458     atcacaggaatgcccttacaaatactgtgactcgtgatcttactgagcagaccaatgcca 517
               ||||| |||||  |||| |||||  |||| || ||||||||||| |||||||||||||||
Sbjct: 9736197 atcacgggaatatccttgcaaattttgtggcttgtgatcttactaagcagaccaatgcca 9736256

                                                                           
Query: 518     gatagacaaggcatggcgaccctcagttaatacaaggtcaatacggttttgcacatcttc 577
               || ||||  |||||  ||||| || || ||||||||||||||  ||||||||| ||||||
Sbjct: 9736257 gacagacgtggcattacgacc-tcggtcaatacaaggtcaatgtggttttgcagatcttc 9736315

                                                          
Query: 578     aagatattgccatgcatccaatccattctcagcagagataact 620
               |||| ||||||||||||  |  ||||| ||||||| |||||||
Sbjct: 9736316 aagacattgccatgcatgtagcccattttcagcagggataact 9736358



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/149 (84%), Gaps = 3/149 (2%)
 Strand = Plus / Plus

                                                                           
Query: 1       ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
               |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 9734054 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 9734113

                                                                           
Query: 59      aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
               |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 9734114 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 9734172

                                            
Query: 119     tccacagcacgcttcgtccatgaactctg 147
               ||||| |||||||| ||||||||||||||
Sbjct: 9734173 tccactgcacgctttgtccatgaactctg 9734201



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                 
Query: 146     tgagtgccactgccattatcactgccatccctagcattgggcccaacact 195
               ||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 9735610 tgagtgccactgccattatcactgccatccctagcgttgtgtccaacact 9735659



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                           
Query: 245     ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
               ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 9735718 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 9735777

                              
Query: 305     ctttcacttccactg 319
               ||||| |||||||||
Sbjct: 9735778 ctttcgcttccactg 9735792

---

>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
              sequence
          Length = 165113

 Score =  131 bits (66), Expect = 3e-27
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                          
Query: 322    actgtggcatctcctccatatgtgctgccaaagggtcttaagttcattcttccttatcgg 381
              |||||||||||  ||||| |  |||||||||||| |||||||||||||||| | ||| ||
Sbjct: 156849 actgtggcatcgtctccaaacatgctgccaaaggttcttaagttcattcttacgtatagg 156908

                                                                          
Query: 382    cttcactaagaagtcaactgctccctttgatagacacttaaagactgtactcattgagtc 441
              ||||||||  |||||||||||||| ||||| | ||||||||||||||||| |||||||||
Sbjct: 156909 cttcactagaaagtcaactgctccttttgacaaacacttaaagactgtacccattgagtc 156968

                            
Query: 442    attcttagacatca 455
              ||||  ||||||||
Sbjct: 156969 attcgaagacatca 156982



 Score =  101 bits (51), Expect = 3e-18
 Identities = 136/163 (83%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                          
Query: 458    atcacaggaatgcccttacaaatactgtgactcgtgatcttactgagcagaccaatgcca 517
              ||||| |||||  |||| |||||  |||| || ||||||||||| |||||||||||||||
Sbjct: 157096 atcacgggaatatccttgcaaattttgtggcttgtgatcttactaagcagaccaatgcca 157155

                                                                          
Query: 518    gatagacaaggcatggcgaccctcagttaatacaaggtcaatacggttttgcacatcttc 577
              || ||||  |||||  ||||| || || ||||||||||||||  ||||||||| ||||||
Sbjct: 157156 gacagacgtggcattacgacc-tcggtcaatacaaggtcaatgtggttttgcagatcttc 157214

                                                         
Query: 578    aagatattgccatgcatccaatccattctcagcagagataact 620
              |||| ||||||||||||  |  ||||| ||||||| |||||||
Sbjct: 157215 aagacattgccatgcatgtagcccattttcagcagggataact 157257



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/149 (84%), Gaps = 3/149 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
              |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 154953 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 155012

                                                                          
Query: 59     aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
              |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 155013 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 155071

                                           
Query: 119    tccacagcacgcttcgtccatgaactctg 147
              ||||| |||||||| ||||||||||||||
Sbjct: 155072 tccactgcacgctttgtccatgaactctg 155100



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                
Query: 146    tgagtgccactgccattatcactgccatccctagcattgggcccaacact 195
              ||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 156509 tgagtgccactgccattatcactgccatccctagcgttgtgtccaacact 156558



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                          
Query: 245    ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
              ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 156617 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 156676

                             
Query: 305    ctttcacttccactg 319
              ||||| |||||||||
Sbjct: 156677 ctttcgcttccactg 156691

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 3e-27
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                           
Query: 322     actgtggcatctcctccatatgtgctgccaaagggtcttaagttcattcttccttatcgg 381
               |||||||||||  ||||| |  |||||||||||| |||||||||||||||| | ||| ||
Sbjct: 9734071 actgtggcatcgtctccaaacatgctgccaaaggttcttaagttcattcttacgtatagg 9734130

                                                                           
Query: 382     cttcactaagaagtcaactgctccctttgatagacacttaaagactgtactcattgagtc 441
               ||||||||  |||||||||||||| ||||| | ||||||||||||||||| |||||||||
Sbjct: 9734131 cttcactagaaagtcaactgctccttttgacaaacacttaaagactgtacccattgagtc 9734190

                             
Query: 442     attcttagacatca 455
               ||||  ||||||||
Sbjct: 9734191 attcgaagacatca 9734204



 Score =  101 bits (51), Expect = 3e-18
 Identities = 136/163 (83%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                           
Query: 458     atcacaggaatgcccttacaaatactgtgactcgtgatcttactgagcagaccaatgcca 517
               ||||| |||||  |||| |||||  |||| || ||||||||||| |||||||||||||||
Sbjct: 9734318 atcacgggaatatccttgcaaattttgtggcttgtgatcttactaagcagaccaatgcca 9734377

                                                                           
Query: 518     gatagacaaggcatggcgaccctcagttaatacaaggtcaatacggttttgcacatcttc 577
               || ||||  |||||  ||||| || || ||||||||||||||  ||||||||| ||||||
Sbjct: 9734378 gacagacgtggcattacgacc-tcggtcaatacaaggtcaatgtggttttgcagatcttc 9734436

                                                          
Query: 578     aagatattgccatgcatccaatccattctcagcagagataact 620
               |||| ||||||||||||  |  ||||| ||||||| |||||||
Sbjct: 9734437 aagacattgccatgcatgtagcccattttcagcagggataact 9734479



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 126/149 (84%), Gaps = 3/149 (2%)
 Strand = Plus / Plus

                                                                           
Query: 1       ttgcagtcggcaaccacctnt-gctgccta-ctctganctggggtgaattacttgtgcac 58
               |||||||||| |||||||| | ||||| || ||||||  |||||||||||||||| ||||
Sbjct: 9732175 ttgcagtcggtaaccacctgttgctgcatatctctgatgtggggtgaattacttgcgcac 9732234

                                                                           
Query: 59      aagtactatcaggtgaatctgatagnatggtcagaagacacaagttgtgggctatcaatc 118
               |||||||||| |||  ||| ||| |  || |||| |||||   |||||||||| ||||||
Sbjct: 9732235 aagtactatctggtagatcggatggt-tgatcaggagacatttgttgtgggctgtcaatc 9732293

                                            
Query: 119     tccacagcacgcttcgtccatgaactctg 147
               ||||| |||||||| ||||||||||||||
Sbjct: 9732294 tccactgcacgctttgtccatgaactctg 9732322



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                 
Query: 146     tgagtgccactgccattatcactgccatccctagcattgggcccaacact 195
               ||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 9733731 tgagtgccactgccattatcactgccatccctagcgttgtgtccaacact 9733780



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                           
Query: 245     ctgtttttcgcatattcatcaccagtctttggtttggaacacttttgtatatggatgcca 304
               ||||| ||| ||||||||||| ||  ||||||||||| |||||||||| |  ||||||||
Sbjct: 9733839 ctgttattctcatattcatcatcaacctttggtttggtacacttttgtgttcggatgcca 9733898

                              
Query: 305     ctttcacttccactg 319
               ||||| |||||||||
Sbjct: 9733899 ctttcgcttccactg 9733913

---

>gb|AY109518.1| Zea mays CL18439_1 mRNA sequence
          Length = 2089

 Score =  131 bits (66), Expect = 3e-27
 Identities = 134/156 (85%), Gaps = 1/156 (0%)
 Strand = Plus / Minus

                                                                       
Query: 30  ctctganctggggtgaattacttgtgcacaagtactatcaggtgaatctgatagnatggt 89
           |||||| || |||||||||||||||||||| ||||||||||||| |||   |||  || |
Sbjct: 174 ctctgatctagggtgaattacttgtgcacatgtactatcaggtggatcaactagt-tgat 116

                                                                       
Query: 90  cagaagacacaagttgtgggctatcaatctccacagcacgcttcgtccatgaactctgag 149
           | | ||| | | |||||||||| |||||||||||||||||||| |||||||| || ||||
Sbjct: 115 cgggagatataggttgtgggctgtcaatctccacagcacgctttgtccatgagctttgag 56

                                               
Query: 150 tgccactgccattatcactgccatccctagcattgg 185
           | ||||||||||| ||||| ||||||||||||||||
Sbjct: 55  taccactgccattgtcacttccatccctagcattgg 20

---

>ref|XM_479630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3312

 Score =  107 bits (54), Expect = 4e-20
 Identities = 176/217 (81%), Gaps = 6/217 (2%)
 Strand = Plus / Minus

                                                                        
Query: 258  attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
            ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 1096 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 1037

                                                                        
Query: 318  tg------gaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattct 371
            ||      || |||||||| |  ||||| |  |||||||| ||| |||||||||||||||
Sbjct: 1036 tgccactggagctgtggcaccgtctccacacatgctgccataggttcttaagttcattct 977

                                                                        
Query: 372  tccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtac 431
            | | ||| ||||| |||||||||||||| || |||||||| | ||||||||| |||||||
Sbjct: 976  tacgtatgggcttgactaagaagtcaacagcgccctttgacaaacacttaaaaactgtac 917

                                                 
Query: 432  tcattgagtcattcttagacatcatgatcacaggaat 468
             ||| |  |||||   ||||||||| ||||| |||||
Sbjct: 916  ccatagcatcatttgaagacatcataatcactggaat 880



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 71/86 (82%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                        
Query: 104  tgtgggctatcaatctccacagcacgcttcgtccatgaactctg------agtgccactg 157
            ||||| || |||||||| ||||| ||||| |||||||| |||||      ||||||||||
Sbjct: 1241 tgtggactgtcaatctcaacagcgcgctttgtccatgagctctgcgcttgagtgccactg 1182

                                      
Query: 158  ccattatcactgccatccctagcatt 183
            || |||||||||||||| || |||||
Sbjct: 1181 ccgttatcactgccatctcttgcatt 1156

---

>dbj|AB189042.1| Oryza sativa (indica cultivar-group) OsPRR37 mRNA for
           pseudo-response regulator 37, complete cds
          Length = 2115

 Score =  107 bits (54), Expect = 4e-20
 Identities = 176/217 (81%), Gaps = 6/217 (2%)
 Strand = Plus / Minus

                                                                       
Query: 258 attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
           ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 628 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 569

                                                                       
Query: 318 tg------gaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattct 371
           ||      || |||||||| |  ||||| |  |||||||| ||| |||||||||||||||
Sbjct: 568 tgccactggagctgtggcaccgtctccacacatgctgccataggttcttaagttcattct 509

                                                                       
Query: 372 tccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtac 431
           | | ||| ||||| |||||||||||||| || |||||||| | ||||||||| |||||||
Sbjct: 508 tacgtatgggcttgactaagaagtcaacagcgccctttgacaaacacttaaaaactgtac 449

                                                
Query: 432 tcattgagtcattcttagacatcatgatcacaggaat 468
            ||| |  |||||   ||||||||| ||||| |||||
Sbjct: 448 ccatagcatcatttgaagacatcataatcactggaat 412



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 71/86 (82%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                       
Query: 104 tgtgggctatcaatctccacagcacgcttcgtccatgaactctg------agtgccactg 157
           ||||| || |||||||| ||||| ||||| |||||||| |||||      ||||||||||
Sbjct: 773 tgtggactgtcaatctcaacagcgcgctttgtccatgagctctgcgcttgagtgccactg 714

                                     
Query: 158 ccattatcactgccatccctagcatt 183
           || |||||||||||||| || |||||
Sbjct: 713 ccgttatcactgccatctcttgcatt 688

---

>dbj|AB189039.1| Oryza sativa (japonica cultivar-group) OsPRR37 mRNA for
           pseudo-response regulator 37, complete cds
          Length = 2229

 Score =  107 bits (54), Expect = 4e-20
 Identities = 176/217 (81%), Gaps = 6/217 (2%)
 Strand = Plus / Minus

                                                                       
Query: 258 attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
           ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 628 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 569

                                                                       
Query: 318 tg------gaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattct 371
           ||      || |||||||| |  ||||| |  |||||||| ||| |||||||||||||||
Sbjct: 568 tgccactggagctgtggcaccgtctccacacatgctgccataggttcttaagttcattct 509

                                                                       
Query: 372 tccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtac 431
           | | ||| ||||| |||||||||||||| || |||||||| | ||||||||| |||||||
Sbjct: 508 tacgtatgggcttgactaagaagtcaacagcgccctttgacaaacacttaaaaactgtac 449

                                                
Query: 432 tcattgagtcattcttagacatcatgatcacaggaat 468
            ||| |  |||||   ||||||||| ||||| |||||
Sbjct: 448 ccatagcatcatttgaagacatcataatcactggaat 412



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 71/86 (82%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                       
Query: 104 tgtgggctatcaatctccacagcacgcttcgtccatgaactctg------agtgccactg 157
           ||||| || |||||||| ||||| ||||| |||||||| |||||      ||||||||||
Sbjct: 773 tgtggactgtcaatctcaacagcgcgctttgtccatgagctctgcgcttgagtgccactg 714

                                     
Query: 158 ccattatcactgccatccctagcatt 183
           || |||||||||||||| || |||||
Sbjct: 713 ccgttatcactgccatctcttgcatt 688

---

>dbj|AK066112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051N02, full
            insert sequence
          Length = 3312

 Score =  107 bits (54), Expect = 4e-20
 Identities = 176/217 (81%), Gaps = 6/217 (2%)
 Strand = Plus / Minus

                                                                        
Query: 258  attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
            ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 1096 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 1037

                                                                        
Query: 318  tg------gaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattct 371
            ||      || |||||||| |  ||||| |  |||||||| ||| |||||||||||||||
Sbjct: 1036 tgccactggagctgtggcaccgtctccacacatgctgccataggttcttaagttcattct 977

                                                                        
Query: 372  tccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtac 431
            | | ||| ||||| |||||||||||||| || |||||||| | ||||||||| |||||||
Sbjct: 976  tacgtatgggcttgactaagaagtcaacagcgccctttgacaaacacttaaaaactgtac 917

                                                 
Query: 432  tcattgagtcattcttagacatcatgatcacaggaat 468
             ||| |  |||||   ||||||||| ||||| |||||
Sbjct: 916  ccatagcatcatttgaagacatcataatcactggaat 880



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 71/86 (82%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                        
Query: 104  tgtgggctatcaatctccacagcacgcttcgtccatgaactctg------agtgccactg 157
            ||||| || |||||||| ||||| ||||| |||||||| |||||      ||||||||||
Sbjct: 1241 tgtggactgtcaatctcaacagcgcgctttgtccatgagctctgcgcttgagtgccactg 1182

                                      
Query: 158  ccattatcactgccatccctagcatt 183
            || |||||||||||||| || |||||
Sbjct: 1181 ccgttatcactgccatctcttgcatt 1156

---

>dbj|AK059514.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B09, full
           insert sequence
          Length = 731

 Score =  107 bits (54), Expect = 4e-20
 Identities = 176/217 (81%), Gaps = 6/217 (2%)
 Strand = Plus / Minus

                                                                       
Query: 258 attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
           ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 461 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 402

                                                                       
Query: 318 tg------gaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattct 371
           ||      || |||||||| |  ||||| |  |||||||| ||| |||||||||||||||
Sbjct: 401 tgccactggagctgtggcaccgtctccacacatgctgccataggttcttaagttcattct 342

                                                                       
Query: 372 tccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtac 431
           | | ||| ||||| |||||||||||||| || |||||||| | ||||||||| |||||||
Sbjct: 341 tacgtatgggcttgactaagaagtcaacagcgccctttgacaaacacttaaaaactgtac 282

                                                
Query: 432 tcattgagtcattcttagacatcatgatcacaggaat 468
            ||| |  |||||   ||||||||| ||||| |||||
Sbjct: 281 ccatagcatcatttgaagacatcataatcactggaat 245



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 71/86 (82%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                       
Query: 104 tgtgggctatcaatctccacagcacgcttcgtccatgaactctg------agtgccactg 157
           ||||| || |||||||| ||||| ||||| |||||||| |||||      ||||||||||
Sbjct: 606 tgtggactgtcaatctcaacagcgcgctttgtccatgagctctgcgcttgagtgccactg 547

                                     
Query: 158 ccattatcactgccatccctagcatt 183
           || |||||||||||||| || |||||
Sbjct: 546 ccgttatcactgccatctcttgcatt 521

---

>gb|AY359964.1| Oryza sativa (indica cultivar-group) pseudo-response regulator
           protein mRNA, partial cds
          Length = 1923

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 147/180 (81%), Gaps = 6/180 (3%)
 Strand = Plus / Minus

                                                                       
Query: 258 attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
           ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 322 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 263

                                                                       
Query: 318 tg------gaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattct 371
           ||      || |||||||| |  ||||| |  |||||||| ||| |||||||||||||||
Sbjct: 262 tgccactggagctgtggcaccgtctccacacatgctgccataggttcttaagttcattct 203

                                                                       
Query: 372 tccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtac 431
           | | ||| ||||| ||||| |||||||| || |||||||| | ||||||||| |||||||
Sbjct: 202 tacgtatgggcttgactaaaaagtcaacagcgccctttgacaaacacttaaaaactgtac 143



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 71/86 (82%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                       
Query: 104 tgtgggctatcaatctccacagcacgcttcgtccatgaactctg------agtgccactg 157
           ||||| || |||||||| ||||| ||||| |||||||| |||||      ||||||||||
Sbjct: 467 tgtggactgtcaatctcaacagcgcgctttgtccatgagctctgcgcttgagtgccactg 408

                                     
Query: 158 ccattatcactgccatccctagcatt 183
           || |||||||||||||| || |||||
Sbjct: 407 ccgttatcactgccatctcttgcatt 382

---

>dbj|AB243684.1| Lemna gibba LgPRRH37 mRNA for pseudo-response regulator 37
           homologue, complete cds
          Length = 2289

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 309 cacttccactggaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcat 368
           |||| |||||||| ||||||||||||| ||| |  |||||||||||  |||| || || |
Sbjct: 801 cactaccactggagctgtggcatctccgccaaacatgctgccaaagattcttgagctcgt 742

                                                                       
Query: 369 tcttccttatcggcttcactaagaagtcaactgctccctttgatagacacttaaagactg 428
           ||||||  || ||||||||||| ||||||||||| ||||| || | ||||||||||||| 
Sbjct: 741 tcttccgaattggcttcactaaaaagtcaactgcacccttcgacaaacacttaaagacta 682

                                                   
Query: 429 tactcattgagtcattcttagacatcatgatcacaggaat 468
           ||| ||| || |||| |   |||||||||||||| |||||
Sbjct: 681 tacccatagaatcatgcgacgacatcatgatcacgggaat 642

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                            
Query: 344      tgctgccaaagggtcttaagttcattcttccttatcggcttcactaagaagtcaactgct 403
                |||||||| ||| |||||||||||||||| | ||| ||||| |||||||||||||| || 
Sbjct: 29569959 tgctgccataggttcttaagttcattcttacgtatgggcttgactaagaagtcaacagcg 29569900

                                            
Query: 404      ccctttgatagacacttaaagactgtac 431
                |||||||| | ||||||||| |||||||
Sbjct: 29569899 ccctttgacaaacacttaaaaactgtac 29569872



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                            
Query: 258      attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
                ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 29570186 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 29570127

                  
Query: 318      tg 319
                ||
Sbjct: 29570126 tg 29570125



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 146      tgagtgccactgccattatcactgccatccctagcatt 183
                |||||||||||||| |||||||||||||| || |||||
Sbjct: 29570283 tgagtgccactgccgttatcactgccatctcttgcatt 29570246



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       acttgtgcacaagtactatcaggtg 73
                |||||||||||||| ||||||||||
Sbjct: 29572917 acttgtgcacaagtgctatcaggtg 29572893

---

>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0627E10
          Length = 163388

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                         
Query: 344   tgctgccaaagggtcttaagttcattcttccttatcggcttcactaagaagtcaactgct 403
             |||||||| ||| |||||||||||||||| | ||| ||||| |||||||||||||| || 
Sbjct: 96631 tgctgccataggttcttaagttcattcttacgtatgggcttgactaagaagtcaacagcg 96572

                                         
Query: 404   ccctttgatagacacttaaagactgtac 431
             |||||||| | ||||||||| |||||||
Sbjct: 96571 ccctttgacaaacacttaaaaactgtac 96544



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 258   attcatcaccagtctttggtttggaacacttttgtatatggatgccactttcacttccac 317
             ||||||| ||| | |||| ||||| |||||||||| | || |||||||||||||||||||
Sbjct: 96858 attcatccccactttttgatttggcacacttttgtgtctgaatgccactttcacttccac 96799

               
Query: 318   tg 319
             ||
Sbjct: 96798 tg 96797



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 146   tgagtgccactgccattatcactgccatccctagcatt 183
             |||||||||||||| |||||||||||||| || |||||
Sbjct: 96955 tgagtgccactgccgttatcactgccatctcttgcatt 96918



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    acttgtgcacaagtactatcaggtg 73
             |||||||||||||| ||||||||||
Sbjct: 99589 acttgtgcacaagtgctatcaggtg 99565

---

>ref|NM_120359.2| Arabidopsis thaliana APRR7 (PSEUDO-RESPONSE REGULATOR 7);
           transcription regulator AT5G02810 (APRR7) mRNA, complete
           cds
          Length = 2831

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 102/124 (82%)
 Strand = Plus / Minus

                                                                       
Query: 303 cactttcacttccactggaactgtggcatctcctccatatgtgctgccaaagggtcttaa 362
           ||||| |||| ||||| ||||| |||||||| ||||| |  |||||||||||| ||||||
Sbjct: 886 cacttccactaccactagaactttggcatcttctccaaacatgctgccaaaggatcttaa 827

                                                                       
Query: 363 gttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacacttaa 422
           | ||||| || ||||| ||||| || |  |||||||| ||||| || ||||  |||||||
Sbjct: 826 gctcattttttcttattggcttaacaagaaagtcaacagctcctttcgataagcacttaa 767

               
Query: 423 agac 426
           ||||
Sbjct: 766 agac 763

---

>gb|AY142560.1| Arabidopsis thaliana unknown protein (At5g02810) mRNA, complete cds
          Length = 2215

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 102/124 (82%)
 Strand = Plus / Minus

                                                                       
Query: 303 cactttcacttccactggaactgtggcatctcctccatatgtgctgccaaagggtcttaa 362
           ||||| |||| ||||| ||||| |||||||| ||||| |  |||||||||||| ||||||
Sbjct: 625 cacttccactaccactagaactttggcatcttctccaaacatgctgccaaaggatcttaa 566

                                                                       
Query: 363 gttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacacttaa 422
           | ||||| || ||||| ||||| || |  |||||||| ||||| || ||||  |||||||
Sbjct: 565 gctcattttttcttattggcttaacaagaaagtcaacagctcctttcgataagcacttaa 506

               
Query: 423 agac 426
           ||||
Sbjct: 505 agac 502

---

>gb|AY039943.1| Arabidopsis thaliana unknown protein (At5g02810) mRNA, complete cds
          Length = 2633

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 102/124 (82%)
 Strand = Plus / Minus

                                                                       
Query: 303 cactttcacttccactggaactgtggcatctcctccatatgtgctgccaaagggtcttaa 362
           ||||| |||| ||||| ||||| |||||||| ||||| |  |||||||||||| ||||||
Sbjct: 885 cacttccactaccactagaactttggcatcttctccaaacatgctgccaaaggatcttaa 826

                                                                       
Query: 363 gttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacacttaa 422
           | ||||| || ||||| ||||| || |  |||||||| ||||| || ||||  |||||||
Sbjct: 825 gctcattttttcttattggcttaacaagaaagtcaacagctcctttcgataagcacttaa 766

               
Query: 423 agac 426
           ||||
Sbjct: 765 agac 762

---

>dbj|AB046954.1| Arabidopsis thaliana APRR7 mRNA for pseudo-response regulator 7,
           complete cds
          Length = 2184

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 102/124 (82%)
 Strand = Plus / Minus

                                                                       
Query: 303 cactttcacttccactggaactgtggcatctcctccatatgtgctgccaaagggtcttaa 362
           ||||| |||| ||||| ||||| |||||||| ||||| |  |||||||||||| ||||||
Sbjct: 625 cacttccactaccactagaactttggcatcttctccaaacatgctgccaaaggatcttaa 566

                                                                       
Query: 363 gttcattcttccttatcggcttcactaagaagtcaactgctccctttgatagacacttaa 422
           | ||||| || ||||| ||||| || |  |||||||| ||||| || ||||  |||||||
Sbjct: 565 gctcattttttcttattggcttaacaagaaagtcaacagctcctttcgataagcacttaa 506

               
Query: 423 agac 426
           ||||
Sbjct: 505 agac 502

---

>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 145   ctgagtgccactgccattatcactgccatccctagcattgggccc 189
             ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 12235 ctgagtgccactgccattatcgctgccatcccttgcattgagccc 12191

---

>gb|AY970705.1| Hordeum vulgare subsp. spontaneum pseudo-response regulator PPD-H1
            (Ppd-H1) gene, complete cds
          Length = 3552

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 145  ctgagtgccactgccattatcactgccatccctagcattgggccc 189
            ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 1444 ctgagtgccactgccattatcgctgccatcccttgcattgagccc 1400

---

>gb|AY970704.1| Hordeum vulgare subsp. vulgare cultivar Triumph pseudo-response
            regulator PPD-H1 (Ppd-H1) gene, complete cds
          Length = 3539

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 145  ctgagtgccactgccattatcactgccatccctagcattgggccc 189
            ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 1431 ctgagtgccactgccattatcgctgccatcccttgcattgagccc 1387

---

>gb|AY970703.1| Hordeum vulgare cultivar Golden Promise pseudo-response regulator
            PPD-H1 (Ppd-H1) gene, complete cds
          Length = 3539

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 145  ctgagtgccactgccattatcactgccatccctagcattgggccc 189
            ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 1431 ctgagtgccactgccattatcgctgccatcccttgcattgagccc 1387

---

>gb|AY970702.1| Hordeum vulgare subsp. vulgare cultivar Optic pseudo-response
            regulator PPD-H1 (Ppd-H1) gene, complete cds
          Length = 3539

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 145  ctgagtgccactgccattatcactgccatccctagcattgggccc 189
            ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 1431 ctgagtgccactgccattatcgctgccatcccttgcattgagccc 1387

---

>gb|AY970701.1| Hordeum vulgare subsp. vulgare cultivar Igri pseudo-response
            regulator PPD-H1 (Ppd-H1) gene, complete cds
          Length = 3548

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 145  ctgagtgccactgccattatcactgccatccctagcattgggccc 189
            ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 1440 ctgagtgccactgccattatcgctgccatcccttgcattgagccc 1396

---

>dbj|AB243681.1| Lemna paucicostata LpPRRH37 mRNA for pseudo-response regulator 37
           homologue, complete cds
          Length = 2387

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                       
Query: 317 ctggaactgtggcatctcctccatatgtgctgccaaagggtcttaagttcattcttcctt 376
           ||||| ||||| ||||| |||||||  |||||||| ||  | || ||||||||||| |  
Sbjct: 819 ctggagctgtgacatcttctccatacatgctgccagagatttttgagttcattctttcga 760

                                                                       
Query: 377 atcggcttcactaagaagtcaactgctccctttgatagacacttaaagactgtactcatt 436
           || ||||||||||| || ||||| || |||||||| | ||||||||||||| ||| ||| 
Sbjct: 759 attggcttcactaaaaaatcaacagcaccctttgacaaacacttaaagactatacccatg 700

                                           
Query: 437 gagtcattcttagacatcatgatcacaggaat 468
           || ||||     |||||||| |||||||||||
Sbjct: 699 gaatcatgggacgacatcataatcacaggaat 668

---

>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project)
          Length = 104769

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Plus

                                                                         
Query: 326   tggcatctcctccatatgtgctgccaaagggtcttaagttcattcttccttatcggcttc 385
             |||||||| ||||| |  |||||||||||| ||||||| ||||| || ||||| ||||| 
Sbjct: 36102 tggcatcttctccaaacatgctgccaaaggatcttaagctcattttttcttattggctta 36161

                                                      
Query: 386   actaagaagtcaactgctccctttgatagacacttaaagac 426
             || |  |||||||| ||||| || ||||  |||||||||||
Sbjct: 36162 acaagaaagtcaacagctcctttcgataagcacttaaagac 36202

---

>ref|XM_776031.1| PREDICTED: Strongylocentrotus purpuratus similar to B-cell linker
           (LOC575645), mRNA
          Length = 1230

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 301 gccactttcacttccactggaact 324
           ||||||||||||||||||||||||
Sbjct: 645 gccactttcacttccactggaact 622

---

>gb|AC182673.2| Populus trichocarpa clone Pop1-26A1, complete sequence
          Length = 80768

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 560   acggttttgcacatcttcaagatatt 585
             ||||||||||| ||||||||||||||
Sbjct: 14727 acggttttgcatatcttcaagatatt 14752

---

>emb|AL021127.2|MMCMX137 Mus musculus chromosome X contigA; putative Magea9 gene, Caltractin,
              NAD(P) steroid dehydrogenase and Zinc finger protein 185
          Length = 195025

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 146    tgagtgccactgccattatcactgcc 171
              ||||| ||||||||||||||||||||
Sbjct: 190605 tgagtcccactgccattatcactgcc 190580

---

>emb|BX813330.7| Mouse DNA sequence from clone RP23-11C16 on chromosome X, complete
             sequence
          Length = 148732

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 146   tgagtgccactgccattatcactgcc 171
             ||||| ||||||||||||||||||||
Sbjct: 25328 tgagtcccactgccattatcactgcc 25303

---

>gb|AY611028.1| Castanea sativa timing of CAB expression 1 protein (TOC1) mRNA,
           complete cds
          Length = 2639

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 449 gacatcatgatcacaggaatgc 470
           ||||||||||||||||||||||
Sbjct: 716 gacatcatgatcacaggaatgc 695

---

>emb|AL136329.1|MM303011 Mus musculus chromosome X, clone RP21-303O11
          Length = 123835

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 146   tgagtgccactgccattatcactgcc 171
             ||||| ||||||||||||||||||||
Sbjct: 46879 tgagtcccactgccattatcactgcc 46854

---

>ref|XM_526051.1| PREDICTED: Pan troglodytes similar to F-box protein 36; F-box only
           protein 36 (LOC470669), mRNA
          Length = 603

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 569 cacatcttcaagatattgcca 589
           |||||||||||||||||||||
Sbjct: 362 cacatcttcaagatattgcca 382

---

>gb|DQ452068.1| Homo sapiens lipoprotein, Lp(a) (LPA) gene, complete cds
          Length = 136345

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    ccactgccattatcactgcca 172
              |||||||||||||||||||||
Sbjct: 132001 ccactgccattatcactgcca 132021

---

>gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, RP23-193K14, complete
             sequence
          Length = 214157

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   actgccattatcactgccatc 174
             |||||||||||||||||||||
Sbjct: 36056 actgccattatcactgccatc 36036

---

>emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chromosome 6 Contains the
             3' end of the LPA gene for lipoprotein (Lp(a)) and a CpG
             island, complete sequence
          Length = 135751

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   ccactgccattatcactgcca 172
             |||||||||||||||||||||
Sbjct: 18981 ccactgccattatcactgcca 18961

---

>emb|AL713641.1|HSM802963 Homo sapiens genomic DNA; cDNA DKFZp761C1622 (from clone
           DKFZp761C1622)
          Length = 3427

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  gtcagaagacacaagttgtgg 108
           |||||||||||||||||||||
Sbjct: 544 gtcagaagacacaagttgtgg 564

---

>gb|AC114941.2| Homo sapiens chromosome 5 clone CTD-2287M17, complete sequence
          Length = 159281

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 571    catcttcaagatattgccatg 591
              |||||||||||||||||||||
Sbjct: 122528 catcttcaagatattgccatg 122548

---

>gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, complete sequence
          Length = 160837

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 606   tcagcagagataacttcatag 626
             |||||||||||||||||||||
Sbjct: 46382 tcagcagagataacttcatag 46402

---

>dbj|AK035970.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630022H21 product:weakly similar
            to CDNA FLJ12878 FIS, CLONE NT2RP2003840, WEAKLY SIMILAR
            TO HYPOTHETICAL 48.1 KDA PROTEIN B0403.2 IN CHROMOSOME X
            [Homo sapiens], full insert sequence
          Length = 2423

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 1798 actgccattatcactgccatc 1778

---

>dbj|AK045398.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230113M03 product:weakly similar
            to PUTATIVE UBIQUITIN-CONJUGATING ENZYME E2 [Arabidopsis
            thaliana], full insert sequence
          Length = 2320

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 1949 actgccattatcactgccatc 1929

---

>gb|AC013459.9| Homo sapiens BAC clone RP11-169L20 from 2, complete sequence
          Length = 170705

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    gtcagaagacacaagttgtgg 108
             |||||||||||||||||||||
Sbjct: 37897 gtcagaagacacaagttgtgg 37917

---

>ref|NM_173755.3| Mus musculus ubiquitin-conjugating enzyme E2O (Ube2o), mRNA
          Length = 5192

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 4579 actgccattatcactgccatc 4559

---

>dbj|AK129431.1| Mus musculus mRNA for mKIAA1734 protein
          Length = 5192

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 4580 actgccattatcactgccatc 4560

---

>gb|BC023329.1| Mus musculus ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
            IMAGE:3986325)
          Length = 2696

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 2310 actgccattatcactgccatc 2290

---

>gb|BC059193.1| Mus musculus ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
            MGC:65407 IMAGE:4160667), complete cds
          Length = 4569

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 4205 actgccattatcactgccatc 4185

---

>gb|BC051108.1| Mus musculus ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
            IMAGE:5360492), containing frame-shift errors
          Length = 3337

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 2924 actgccattatcactgccatc 2904

---

>gb|BC055067.1| Mus musculus ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
            IMAGE:30030967), complete cds
          Length = 2306

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 1671 actgccattatcactgccatc 1651

---

>gb|BC039233.1| Mus musculus ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
            IMAGE:4920113), with apparent retained intron
          Length = 3418

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 154  actgccattatcactgccatc 174
            |||||||||||||||||||||
Sbjct: 3046 actgccattatcactgccatc 3026

---

>emb|AL645851.8| Mouse DNA sequence from clone RP23-193A16 on chromosome 11, complete
             sequence
          Length = 112037

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   actgccattatcactgccatc 174
             |||||||||||||||||||||
Sbjct: 75976 actgccattatcactgccatc 75996

---

>emb|CT030077.2| Xenopus tropicalis finished cDNA, clone TEgg100a05
          Length = 1510

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 292 tatatggatgccactttcacttcc 315
           |||||||| |||||||||||||||
Sbjct: 855 tatatggaggccactttcacttcc 832

---

>gb|AC147148.2| Pan troglodytes BAC clone CH251-267E22 from Y, complete sequence
          Length = 151370

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    ggaacacttttgtatatgga 299
              ||||||||||||||||||||
Sbjct: 146659 ggaacacttttgtatatgga 146678

---

>gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosome 13, complete
             sequence
          Length = 207318

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   acacttttgtatatggatgc 302
             ||||||||||||||||||||
Sbjct: 66157 acacttttgtatatggatgc 66176

---

>emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chromosome 1 Contains the
             5' end of the ZMYND12 gene for zinc finger MYND domain
             containing 12, a novel gene, the 5' end of a novel gene, a
             ribosomal protein S3a (RPS3A) pseudogene, a thymosin, beta
             4, X-linked (TMSB4X) pseudogene, a novel pseudogene (DC2)
             and two CpG islands, complete sequence
          Length = 153640

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 592   catccaatccattctcagca 611
             ||||||||||||||||||||
Sbjct: 32431 catccaatccattctcagca 32412

---

>gb|AC069233.16| Homo sapiens 3 BAC RP11-95H16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154204

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   atattcatcaccagtctttg 275
             ||||||||||||||||||||
Sbjct: 34115 atattcatcaccagtctttg 34096

---

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 273     ttggtttggaacacttttgt 292
               ||||||||||||||||||||
Sbjct: 3124215 ttggtttggaacacttttgt 3124196

---

>dbj|BS000668.1| Pan troglodytes chromosome Y clone:PTFY-015J14, complete sequences
          Length = 38005

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ggaacacttttgtatatgga 299
            ||||||||||||||||||||
Sbjct: 6435 ggaacacttttgtatatgga 6416

---

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ggaacacttttgtatatgga 299
            ||||||||||||||||||||
Sbjct: 4712 ggaacacttttgtatatgga 4693

---

>gb|AC104164.2| Homo sapiens chromosome 3 clone RP11-641C17, complete sequence
          Length = 197483

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 256    atattcatcaccagtctttggtttggaa 283
              |||||||||||| || ||||||||||||
Sbjct: 190580 atattcatcacctgtgtttggtttggaa 190607

---

>gb|AC093556.2| Homo sapiens chromosome 3 clone RP11-48E21, complete sequence
          Length = 152726

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 256   atattcatcaccagtctttggtttggaa 283
             |||||||||||| || ||||||||||||
Sbjct: 18852 atattcatcacctgtgtttggtttggaa 18879

---

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 273     ttggtttggaacacttttgt 292
               ||||||||||||||||||||
Sbjct: 3061385 ttggtttggaacacttttgt 3061366

---

>gb|AY371288.1| Mesembryanthemum crystallinum timing of CAB expression 1 (TOC1)
           mRNA, complete cds
          Length = 2617

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 449 gacatcatgatcacaggaat 468
           ||||||||||||||||||||
Sbjct: 757 gacatcatgatcacaggaat 738

---

>gb|U66722.1|HSU66722 Human chromosome 3p14.2 fragile site FRA3B sequence
          Length = 110434

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 256  atattcatcaccagtctttggtttggaa 283
            |||||||||||| || ||||||||||||
Sbjct: 1219 atattcatcacctgtgtttggtttggaa 1192

---

>gb|AF020503.1|AF020503 Homo sapiens FRA3B common fragile region, diadenosine triphosphate
              hydrolase (FHIT) gene, exon 5
          Length = 206880

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 256    atattcatcaccagtctttggtttggaa 283
              |||||||||||| || ||||||||||||
Sbjct: 167597 atattcatcacctgtgtttggtttggaa 167570


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,425,376
Number of Sequences: 3902068
Number of extensions: 4425376
Number of successful extensions: 77868
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77584
Number of HSP's gapped (non-prelim): 276
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---