ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC073138.3| Homo sapiens BAC clone RP11-708P17 from 7, comple... 42 2.2
2ref|XM_506078.1| Yarrowia lipolytica CLIB122, YALI0F31053g predi... 42 2.2
3dbj|AK128629.1| Homo sapiens cDNA FLJ46788 fis, clone TRACH3028855 42 2.2
4dbj|AK091283.1| Homo sapiens cDNA FLJ33964 fis, clone CTONG20190... 42 2.2
5gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, c... 42 2.2
6gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, com... 42 2.2
7ref|NM_019042.3| Homo sapiens pseudouridylate synthase 7 homolog... 42 2.2
8gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosom... 42 2.2
9gb|AC084596.1|CBRG42F08 Caenorhabditis briggsae cosmid G42F08, c... 42 2.2
10dbj|AK000492.1| Homo sapiens cDNA FLJ20485 fis, clone KAT07835 42 2.2
11emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on ch... 42 2.2
12emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.2
13dbj|AB067484.1| Homo sapiens mRNA for KIAA1897 protein, partial cds 42 2.2
14gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, co... 40 8.6
15gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, co... 40 8.6
16ref|XM_463441.1| Oryza sativa (japonica cultivar-group), predic... 40 8.6
17gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
18gb|AF338426.3| Octopus dofleini hemocyanin G-type gene, partial cds 40 8.6
19gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
20gb|AC024881.2| Caenorhabditis elegans cosmid Y97E10B, complete s... 40 8.6
21gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, com... 40 8.6
22ref|XM_448796.1| Candida glabrata CBS138, CAGL0L00517g partial mRNA 40 8.6
23gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, comple... 40 8.6
24gb|U40427.1| Caenorhabditis elegans cosmid F43C9, complete sequence 40 8.6
25gb|AC161506.4| Mus musculus chromosome 3, clone RP24-210J6, comp... 40 8.6
26emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 8.6
27gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, co... 40 8.6
28gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, com... 40 8.6
29gb|AC008665.6| Homo sapiens chromosome 5 clone CTB-34L8, complet... 40 8.6
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
34gb|AC025097.41| Homo sapiens 12 BAC RP11-285E4 (Roswell Park Can... 40 8.6
35dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
36gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, co... 40 8.6
37dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
38dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
39dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
40dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
41dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
42dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
43dbj|AB104509.1| Ciona intestinalis CiCesA mRNA for putative cell... 40 8.6
44dbj|AK122112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
45dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6 
>gb|AC073138.3| Homo sapiens BAC clone RP11-708P17 from 7, complete sequence
          Length = 118396

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 381    taaagttgtatatcaaaactgtatc 405
              |||||||||||||||||| ||||||
Sbjct: 104896 taaagttgtatatcaaaattgtatc 104872
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>ref|XM_506078.1| Yarrowia lipolytica CLIB122, YALI0F31053g predicted mRNA
          Length = 5610

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   cttgggagcattgttgatgga 74
            |||||||||||||||||||||
Sbjct: 4836 cttgggagcattgttgatgga 4816
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>dbj|AK128629.1| Homo sapiens cDNA FLJ46788 fis, clone TRACH3028855
          Length = 3423

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 381  taaagttgtatatcaaaactgtatc 405
            |||||||||||||||||| ||||||
Sbjct: 3343 taaagttgtatatcaaaattgtatc 3367
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>dbj|AK091283.1| Homo sapiens cDNA FLJ33964 fis, clone CTONG2019029, weakly similar to
            39.1 KDA PROTEIN IN SURE-CYSC INTERGENIC REGION
          Length = 2691

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 381  taaagttgtatatcaaaactgtatc 405
            |||||||||||||||||| ||||||
Sbjct: 2611 taaagttgtatatcaaaattgtatc 2635
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>gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, complete sequence
          Length = 166125

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 37     ccttccaacgctattgccttgggag 61
              ||||||||||||||| |||||||||
Sbjct: 152543 ccttccaacgctattaccttgggag 152519
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>gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, complete sequence
          Length = 158840

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 37   ccttccaacgctattgccttgggag 61
            ||||||||||||||| |||||||||
Sbjct: 5764 ccttccaacgctattaccttgggag 5740
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>ref|NM_019042.3| Homo sapiens pseudouridylate synthase 7 homolog (S. cerevisiae)
            (PUS7), mRNA
          Length = 3484

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 381  taaagttgtatatcaaaactgtatc 405
            |||||||||||||||||| ||||||
Sbjct: 3361 taaagttgtatatcaaaattgtatc 3385
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>gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosome 13, complete
             sequence
          Length = 202134

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   ttcattaaacaattcttcaaa 323
             |||||||||||||||||||||
Sbjct: 82447 ttcattaaacaattcttcaaa 82467
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>gb|AC084596.1|CBRG42F08 Caenorhabditis briggsae cosmid G42F08, complete sequence
          Length = 44999

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 537 caaatcaagaattgcagggaatgct 561
           ||||||||||||||||| |||||||
Sbjct: 284 caaatcaagaattgcagagaatgct 260
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>dbj|AK000492.1| Homo sapiens cDNA FLJ20485 fis, clone KAT07835
          Length = 2021

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 381  taaagttgtatatcaaaactgtatc 405
            |||||||||||||||||| ||||||
Sbjct: 1885 taaagttgtatatcaaaattgtatc 1909
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>emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on chromosome 2, complete
             sequence
          Length = 206918

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 159   catatattaattatcataggtgatg 183
             ||||| |||||||||||||||||||
Sbjct: 75210 catattttaattatcataggtgatg 75186
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 54      cttgggagcattgttgatgga 74
               |||||||||||||||||||||
Sbjct: 3871506 cttgggagcattgttgatgga 3871526
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>dbj|AB067484.1| Homo sapiens mRNA for KIAA1897 protein, partial cds
          Length = 3220

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 381  taaagttgtatatcaaaactgtatc 405
            |||||||||||||||||| ||||||
Sbjct: 3095 taaagttgtatatcaaaattgtatc 3119
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>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence
          Length = 162813

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   tatgtccaggctctgaaatg 630
             ||||||||||||||||||||
Sbjct: 25126 tatgtccaggctctgaaatg 25145
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>gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, complete sequence
          Length = 171669

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   gtttctactttttagttcat 307
             ||||||||||||||||||||
Sbjct: 72967 gtttctactttttagttcat 72948
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>ref|XM_463441.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  atgaacaagacacgatgttt 291
            ||||||||||||||||||||
Sbjct: 1301 atgaacaagacacgatgttt 1320
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>gb|AY360393.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0096K16,
             complete sequence
          Length = 164501

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   cctgacatatattaattatcatag 177
             |||||||||||| |||||||||||
Sbjct: 58259 cctgacatatataaattatcatag 58282
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>gb|AF338426.3| Octopus dofleini hemocyanin G-type gene, partial cds
          Length = 14605

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 286 atgtttctactttttagttc 305
           ||||||||||||||||||||
Sbjct: 260 atgtttctactttttagttc 279
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC
            OSJNBa0070J19, complete sequence
          Length = 158749

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 154  cctgacatatattaattatcatag 177
            |||||||||||| |||||||||||
Sbjct: 4988 cctgacatatataaattatcatag 4965
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>gb|AC024881.2| Caenorhabditis elegans cosmid Y97E10B, complete sequence
          Length = 36885

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   cattgactttacaaattaaa 129
             ||||||||||||||||||||
Sbjct: 23778 cattgactttacaaattaaa 23759
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>gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, complete sequence
          Length = 177877

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    tcattgtgctacacacattg 114
             ||||||||||||||||||||
Sbjct: 15547 tcattgtgctacacacattg 15528
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>ref|XM_448796.1| Candida glabrata CBS138, CAGL0L00517g partial mRNA
          Length = 3003

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   ggagcattgttgatggacca 77
            ||||||||||||||||||||
Sbjct: 2964 ggagcattgttgatggacca 2945
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>gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, complete sequence
          Length = 182372

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   acatggattaaaagccaagtaaag 385
             ||||||||||||||||| ||||||
Sbjct: 18519 acatggattaaaagccaggtaaag 18496
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>gb|U40427.1| Caenorhabditis elegans cosmid F43C9, complete sequence
          Length = 34037

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 116  ctttacaaattaaatacaacacat 139
            |||||||||||||| |||||||||
Sbjct: 3080 ctttacaaattaaaaacaacacat 3103
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>gb|AC161506.4| Mus musculus chromosome 3, clone RP24-210J6, complete sequence
          Length = 175241

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 gtttctactttttagttcat 307
           ||||||||||||||||||||
Sbjct: 547 gtttctactttttagttcat 566
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    ggagcattgttgatggacca 77
             ||||||||||||||||||||
Sbjct: 56067 ggagcattgttgatggacca 56086
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>gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, complete sequence
          Length = 161586

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   taattctgtaccacatggat 369
             ||||||||||||||||||||
Sbjct: 41077 taattctgtaccacatggat 41096
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>gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, complete sequence
          Length = 205264

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   tatgtccaggctctgaaatg 630
             ||||||||||||||||||||
Sbjct: 97985 tatgtccaggctctgaaatg 97966
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>gb|AC008665.6| Homo sapiens chromosome 5 clone CTB-34L8, complete sequence
          Length = 133329

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 364    atggattaaaagccaagtaaagtt 387
              |||||||||| |||||||||||||
Sbjct: 112738 atggattaaatgccaagtaaagtt 112715
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 154     cctgacatatattaattatcatag 177
               |||||||||||| |||||||||||
Sbjct: 3454144 cctgacatatataaattatcatag 3454167
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 154      cctgacatatattaattatcatag 177
                |||||||||||| |||||||||||
Sbjct: 12388847 cctgacatatataaattatcatag 12388870
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 154      cctgacatatattaattatcatag 177
                |||||||||||| |||||||||||
Sbjct: 12903412 cctgacatatataaattatcatag 12903389
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 272      atgaacaagacacgatgttt 291
                ||||||||||||||||||||
Sbjct: 32010599 atgaacaagacacgatgttt 32010580



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 154      cctgacatatattaattatcatag 177
                |||||||||||| |||||||||||
Sbjct: 16186013 cctgacatatataaattatcatag 16185990
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>gb|AC025097.41| Homo sapiens 12 BAC RP11-285E4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 203530

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   gagaacagaaatttacttat 613
             ||||||||||||||||||||
Sbjct: 58923 gagaacagaaatttacttat 58904
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   atgaacaagacacgatgttt 291
             ||||||||||||||||||||
Sbjct: 52413 atgaacaagacacgatgttt 52394
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>gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, complete sequence
          Length = 195806

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   taattctgtaccacatggat 369
             ||||||||||||||||||||
Sbjct: 48251 taattctgtaccacatggat 48232
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>dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1451_A02
          Length = 135861

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 154  cctgacatatattaattatcatag 177
            |||||||||||| |||||||||||
Sbjct: 7032 cctgacatatataaattatcatag 7055
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>dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0676G08
          Length = 153154

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   cctgacatatattaattatcatag 177
             |||||||||||| |||||||||||
Sbjct: 62420 cctgacatatataaattatcatag 62397
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0045D08
          Length = 160541

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    cctgacatatattaattatcatag 177
              |||||||||||| |||||||||||
Sbjct: 147496 cctgacatatataaattatcatag 147519
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>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A18
          Length = 176755

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    cctgacatatattaattatcatag 177
              |||||||||||| |||||||||||
Sbjct: 122894 cctgacatatataaattatcatag 122871
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>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1058_F03
          Length = 150486

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    cctgacatatattaattatcatag 177
              |||||||||||| |||||||||||
Sbjct: 122625 cctgacatatataaattatcatag 122648
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0688H12
          Length = 139279

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   cctgacatatattaattatcatag 177
             |||||||||||| |||||||||||
Sbjct: 13055 cctgacatatataaattatcatag 13032
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>dbj|AB104509.1| Ciona intestinalis CiCesA mRNA for putative cellulose synthase,
            complete cds
          Length = 4191

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  tatctccgccaaaagtttca 421
            ||||||||||||||||||||
Sbjct: 1091 tatctccgccaaaagtttca 1110
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>dbj|AK122112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127O09, full
            insert sequence
          Length = 2366

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  atgaacaagacacgatgttt 291
            ||||||||||||||||||||
Sbjct: 1836 atgaacaagacacgatgttt 1855
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    atgaacaagacacgatgttt 291
              ||||||||||||||||||||
Sbjct: 107326 atgaacaagacacgatgttt 107307


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,372,711
Number of Sequences: 3902068
Number of extensions: 6372711
Number of successful extensions: 126443
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126176
Number of HSP's gapped (non-prelim): 267
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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