| Clone Name | rbaal10m06 |
|---|---|
| Clone Library Name | barley_pub |
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 33.5 bits (75), Expect = 0.61 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = +2 Query: 446 WAWSILHVTTRITLVALVTSLVPRGWGTLVSRGWGTLVSRGRRCILIVWSTSWNIARLW 622 W LH TR+ + T L+P GW V TLV G + T WN+A W Sbjct: 435 WLGDHLHSLTRVDIGPGETMLIPSGWLHCVYTPKNTLVVGGN------FLTDWNVATQW 487
>SPRR3_MOUSE (O09116) Small proline-rich protein 3 (Cornifin beta)| Length = 238 Score = 33.1 bits (74), Expect = 0.80 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -2 Query: 567 PLDTKVPQPLDTKVPQPLGTKLVTKATKVIL 475 P T VPQP +TK+P+P TK+ V+L Sbjct: 41 PCHTDVPQPGNTKIPEPCSTKVPEPGNTVVL 71 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = -2 Query: 570 RPLDTKVPQPLDTKVPQPLGTKLVTKATKVILVVTCRMDQAQPIIATTLDTTRVEGQVST 391 +P +TK+P+P TKVP+P G +V + + C + +P D T + G ST Sbjct: 48 QPGNTKIPEPCSTKVPEP-GNTVVLEPDYTTMPGPCSTNITEP------DYTTIPGPCST 100
>SPR2H_MOUSE (O70559) Small proline-rich protein 2H| Length = 108 Score = 33.1 bits (74), Expect = 0.80 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -3 Query: 653 PTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNPW-IPRCPNPWVPSW*PRLP 486 P K P PCP P +CT P+CP P P+CP P P P+ P Sbjct: 29 PPKCPEPCPPP-------------KCTEPCPPPKCPEPCPPPKCPEPCPP---PKCP 69
>SPR2B_MOUSE (O70554) Small proline-rich protein 2B| Length = 98 Score = 32.7 bits (73), Expect = 1.0 Identities = 16/49 (32%), Positives = 17/49 (34%) Frame = -3 Query: 653 PTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNPWIPRCPNPWVP 507 P K P PCP P C PW P+CP P C P Sbjct: 47 PPKCPEPCPPPVCCEPCPPPVCCEPCPPQPWQPKCPPVQFPPCQQKCPP 95
>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X| Length = 462 Score = 30.4 bits (67), Expect = 5.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 583 DSLVHLLEHSPPVGLGHGTGNLVGHPKAVAG 675 D+ +HL+ H+ P G GHG + GH G Sbjct: 206 DAFLHLIPHATPAGDGHGHSHSHGHSHGGGG 236
>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)| Length = 634 Score = 30.4 bits (67), Expect = 5.2 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -3 Query: 566 PWIPRCPNPWIPRCPNPWVP 507 P IP P WIP P W+P Sbjct: 167 PPIPNIPTDWIPNIPTDWIP 186
>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)| (HDC) Length = 290 Score = 30.0 bits (66), Expect = 6.8 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 8/55 (14%) Frame = -3 Query: 656 CPTKLPVP-CPKPTGGLCSRRWTKLSECTAAPWIPRCPNPW-------IPRCPNP 516 C T P P CP+P C P PRCP P PRCP P Sbjct: 33 CDTPPPCPRCPEP------------KSCDTPPPCPRCPEPKSCDTPPPCPRCPAP 75
>SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) (SPR1B) (SPR1| B) Length = 153 Score = 30.0 bits (66), Expect = 6.8 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Frame = -2 Query: 642 TSPMPQTHRRAMFQEV-----DQTIRMHRRPLDTKVPQPLDTKVPQPLGTK 505 T+P PQ H + + Q + + + P DTKVP+P K P+P K Sbjct: 11 TAP-PQLHEQQVKQPCQPPPPEPCVSQVKTPCDTKVPEPCHPKAPEPCHPK 60
>SPRR3_HUMAN (Q9UBC9) Small proline-rich protein 3 (Cornifin beta) (Esophagin)| (22 kDa pancornulin) Length = 169 Score = 30.0 bits (66), Expect = 6.8 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -2 Query: 573 RRPLDTKVPQPLDTKVPQPLGTKL 502 + P +KVPQP +TK+P+P TK+ Sbjct: 38 KEPCHSKVPQPGNTKIPEPGCTKV 61
>SPR2G_MOUSE (O70558) Small proline-rich protein 2G| Length = 76 Score = 30.0 bits (66), Expect = 6.8 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = -3 Query: 653 PTKLPVPCPKPTGGLCSRRWTKLSECTAAPWIPRCPNPWIPRCPNPWVPS 504 P K P PCP P +C P+CP P CP P +PS Sbjct: 20 PPKCPEPCPLP-------------KCPEPCPPPKCPEP----CPEPCLPS 52
>FGF6_HUMAN (P10767) Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6)| (HST-2) Length = 208 Score = 29.6 bits (65), Expect = 8.9 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Frame = +2 Query: 437 MMGWAWSILHVTTRITLVALVTSLVPRGWGT------LVSRGWGTLVSRGR 571 + G W++ + L LV +VP GT L SRGWGTL+SR R Sbjct: 18 LQGTLWAL------VFLGILVGMVVPSPAGTRANNTLLDSRGWGTLLSRSR 62
>SPRR1_RABIT (P35324) Cornifin alpha (Small proline-rich protein I) (SPR-I)| Length = 126 Score = 29.6 bits (65), Expect = 8.9 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 Query: 567 PLDTKVPQPLDTKVPQPLGTK 505 P +KVPQP KVP+P TK Sbjct: 104 PCQSKVPQPCQPKVPEPCQTK 124
>GP149_MOUSE (Q3UVY1) Probable G-protein coupled receptor 149 (G-protein coupled| receptor PGR10) Length = 732 Score = 29.6 bits (65), Expect = 8.9 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +2 Query: 419 VSRVVAMMGWAW---SILHVTTRITLVALVTSLVPR-GWGTLVSRGWGTLVSRGRRCILI 586 ++R V +W +L VT + V+L+ + +P GWG V WG L +L+ Sbjct: 135 MNRTVESQSSSWRLGQVLGVTLTVWAVSLLLASLPLCGWGVFVRTPWGCLTDCSSPYVLL 194 Query: 587 VWS 595 +++ Sbjct: 195 LFA 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,727,087 Number of Sequences: 219361 Number of extensions: 1580418 Number of successful extensions: 5706 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4989 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5584 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)