ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10m02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187534.1| Oryza sativa (japonica cultivar-group), predic... 72 3e-09
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 3e-09
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
4gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 72 3e-09
5gb|AF537267.1| Synthetic construct insect toxin CryIA(c) gene, c... 44 0.59
6emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20... 44 0.59
7gb|AY667343.1| Ciona intestinalis isolate east coast 5 forkhead ... 42 2.3
8gb|AC107677.7| Mus musculus chromosome 3, clone RP23-235F22, com... 42 2.3
9gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic... 42 2.3
10gb|AC148157.1| Homo sapiens chromosome 21 clone XX-181G02-M map ... 42 2.3
11emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chr... 42 2.3
12gb|AY271661.1| Homo sapiens v-raf-1 murine leukemia viral oncoge... 42 2.3
13dbj|AP001705.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.3
14gb|AC101992.11| Mus musculus chromosome 3, clone RP24-377J3, com... 42 2.3
15gb|AC026170.5| Homo sapiens chromosome 3 clone RP11-163D23 map 3... 42 2.3
16dbj|AP000240.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 42 2.3
17dbj|AP000200.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 42 2.3
18dbj|AP000096.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 42 2.3
19gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, com... 40 9.2
20gb|AC005592.1| Homo sapiens chromosome 5, BAC clone 79a6 (LBNL H... 40 9.2
21ref|XM_367648.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 9.2
22ref|XM_322354.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
23ref|XM_952647.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
24gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 9.2
25emb|CT010162.2| Pan troglodytes chromosome X BAC RP43-009H04, co... 40 9.2
26gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, compl... 40 9.2
27emb|AL357514.19| Human DNA sequence from clone RP1-105O18 on chr... 40 9.2
28emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.2
29gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chrom... 40 9.2
30gb|AC023711.5| Drosophila melanogaster X BAC RP98-6C4 (Roswell P... 40 9.2
31gb|AC023685.4| Drosophila melanogaster 3L BAC RP98-20N12 (Roswel... 40 9.2
32gb|AF511750.1| Hepatitis C virus isolate XF24 partial sequence 40 9.2
33dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 9.2
34ref|NM_144220.1| Drosophila melanogaster CG12714-RB (CG12714), mRNA 40 9.2
35gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, compl... 40 9.2
36gb|AC078957.16| Homo sapiens Xp BAC RP11-339E16 (Roswell Park Ca... 40 9.2
37gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 9.2
38ref|XM_394771.2| PREDICTED: Apis mellifera insulin-like receptor... 40 9.2
39gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chrom... 40 9.2
40emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 ... 40 9.2
41gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 9.2
42emb|BX005199.10| Zebrafish DNA sequence from clone DKEY-12I13 in... 40 9.2
43gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 9.2
44gb|AF067496.1|AF067496 Leishmania donovani aminophospholipid tra... 40 9.2
45emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, co... 40 9.2
46gb|DQ084248.1| Uncultured bacterium BAC-L1N9, complete sequence ... 40 9.2
47emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chro... 40 9.2
48emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chr... 40 9.2 
>ref|NM_187534.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1179

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 579 ccgctgtcgtcgaagagctgcgctagcgagtagtcgttgagcaactctgaaatggacggg 638
           |||| |||||||||||||||||  |||||||| ||||||||||  || |||||||| |||
Sbjct: 782 ccgccgtcgtcgaagagctgcgacagcgagtactcgttgagcaggtcggaaatggaaggg 723

                       
Query: 639 atcttcggcatc 650
           |||||| |||||
Sbjct: 722 atcttctgcatc 711
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                            
Query: 579      ccgctgtcgtcgaagagctgcgctagcgagtagtcgttgagcaactctgaaatggacggg 638
                |||| |||||||||||||||||  |||||||| ||||||||||  || |||||||| |||
Sbjct: 11947943 ccgccgtcgtcgaagagctgcgacagcgagtactcgttgagcaggtcggaaatggaaggg 11948002

                            
Query: 639      atcttcggcatc 650
                |||||| |||||
Sbjct: 11948003 atcttctgcatc 11948014
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                            
Query: 579      ccgctgtcgtcgaagagctgcgctagcgagtagtcgttgagcaactctgaaatggacggg 638
                |||| |||||||||||||||||  |||||||| ||||||||||  || |||||||| |||
Sbjct: 11944706 ccgccgtcgtcgaagagctgcgacagcgagtactcgttgagcaggtcggaaatggaaggg 11944765

                            
Query: 639      atcttcggcatc 650
                |||||| |||||
Sbjct: 11944766 atcttctgcatc 11944777
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 579   ccgctgtcgtcgaagagctgcgctagcgagtagtcgttgagcaactctgaaatggacggg 638
             |||| |||||||||||||||||  |||||||| ||||||||||  || |||||||| |||
Sbjct: 49205 ccgccgtcgtcgaagagctgcgacagcgagtactcgttgagcaggtcggaaatggaaggg 49264

                         
Query: 639   atcttcggcatc 650
             |||||| |||||
Sbjct: 49265 atcttctgcatc 49276
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>gb|AF537267.1| Synthetic construct insect toxin CryIA(c) gene, complete cds
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 486  atgttgttgccgctgctgttca 507
            ||||||||||||||||||||||
Sbjct: 1523 atgttgttgccgctgctgttca 1502
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>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and
              01G10 from library NotreDame1 of Anopheles gambiae (African
              malaria mosquito) strain PEST
          Length = 447895

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 107    caataatttgtctaatttggac 128
              ||||||||||||||||||||||
Sbjct: 444752 caataatttgtctaatttggac 444731
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>gb|AY667343.1| Ciona intestinalis isolate east coast 5 forkhead gene, partial cds
          Length = 4478

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 95   tatatttttgaccaataattt 115
            |||||||||||||||||||||
Sbjct: 1252 tatatttttgaccaataattt 1232
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>gb|AC107677.7| Mus musculus chromosome 3, clone RP23-235F22, complete sequence
          Length = 157746

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 151  ataattgtttttcaagtcaccactt 175
            |||||||||||||||| ||||||||
Sbjct: 7347 ataattgtttttcaagccaccactt 7371
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>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete
             sequence
          Length = 124895

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 87    tttccctatatatttttgaccaataattt 115
             |||||||||||||||| |||| |||||||
Sbjct: 66920 tttccctatatattttggacctataattt 66948
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>gb|AC148157.1| Homo sapiens chromosome 21 clone XX-181G02-M map q21.3-22.11, complete
             sequence
          Length = 210352

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 454   aggctggtgaatccatctgcccaag 478
             |||||||||||||||||| ||||||
Sbjct: 93546 aggctggtgaatccatcttcccaag 93522
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>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete
             sequence
          Length = 159845

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 181   tatataattcagactgatggagtag 205
             ||||||||||| |||||||||||||
Sbjct: 23825 tatataattcatactgatggagtag 23849
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>gb|AY271661.1| Homo sapiens v-raf-1 murine leukemia viral oncogene homolog 1 (RAF1)
             gene, complete cds
          Length = 82374

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 487   tgttgttgccgctgctgttca 507
             |||||||||||||||||||||
Sbjct: 27367 tgttgttgccgctgctgttca 27387
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>dbj|AP001705.1| Homo sapiens genomic DNA, chromosome 21q, section 49/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 454    aggctggtgaatccatctgcccaag 478
              |||||||||||||||||| ||||||
Sbjct: 100537 aggctggtgaatccatcttcccaag 100513
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>gb|AC101992.11| Mus musculus chromosome 3, clone RP24-377J3, complete sequence
          Length = 191967

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 151   ataattgtttttcaagtcaccactt 175
             |||||||||||||||| ||||||||
Sbjct: 20586 ataattgtttttcaagccaccactt 20562
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>gb|AC026170.5| Homo sapiens chromosome 3 clone RP11-163D23 map 3p, complete sequence
          Length = 145212

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 487   tgttgttgccgctgctgttca 507
             |||||||||||||||||||||
Sbjct: 62588 tgttgttgccgctgctgttca 62568
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>dbj|AP000240.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:B175P11, complete sequence
          Length = 176099

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 454   aggctggtgaatccatctgcccaag 478
             |||||||||||||||||| ||||||
Sbjct: 90894 aggctggtgaatccatcttcccaag 90870
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>dbj|AP000200.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B355D16-T1073, segment 6/8, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 454   aggctggtgaatccatctgcccaag 478
             |||||||||||||||||| ||||||
Sbjct: 77454 aggctggtgaatccatcttcccaag 77478
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>dbj|AP000096.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             B335D16-P10G11 region, segment 6/7
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 454   aggctggtgaatccatctgcccaag 478
             |||||||||||||||||| ||||||
Sbjct: 77454 aggctggtgaatccatcttcccaag 77478
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>gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, complete sequence
          Length = 161738

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   gacagcctcttgcgcttccc 424
             ||||||||||||||||||||
Sbjct: 89974 gacagcctcttgcgcttccc 89993
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>gb|AC005592.1| Homo sapiens chromosome 5, BAC clone 79a6 (LBNL H172), complete
            sequence
          Length = 90693

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 511  ggaattggctcatgatgggg 530
            ||||||||||||||||||||
Sbjct: 8135 ggaattggctcatgatgggg 8154
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>ref|XM_367648.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG07559.4) partial mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  tcacggccgccgctggctgg 371
            ||||||||||||||||||||
Sbjct: 1649 tcacggccgccgctggctgg 1668
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>ref|XM_322354.1| Neurospora crassa OR74A hypothetical protein (NCU00269.1) partial
            mRNA
          Length = 2865

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  caagtcaccacttggccgta 182
            ||||||||||||||||||||
Sbjct: 2307 caagtcaccacttggccgta 2326
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>ref|XM_952647.1| Neurospora crassa OR74A hypothetical protein (NCU00269.1) partial
            mRNA
          Length = 2865

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  caagtcaccacttggccgta 182
            ||||||||||||||||||||
Sbjct: 2307 caagtcaccacttggccgta 2326
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>gb|AE009144.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 170
            of 256 of the complete sequence
          Length = 10570

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 531  tggccgaagagggcggcgtg 550
            ||||||||||||||||||||
Sbjct: 5189 tggccgaagagggcggcgtg 5170
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>emb|CT010162.2| Pan troglodytes chromosome X BAC RP43-009H04, complete sequence
          Length = 195301

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 80     caatccctttccctatatattttt 103
              |||| |||||||||||||||||||
Sbjct: 149708 caattcctttccctatatattttt 149685
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>gb|AC127337.4| Mus musculus BAC clone RP23-168F21 from 12, complete sequence
          Length = 209066

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     atatttttgaccaataattt 115
              ||||||||||||||||||||
Sbjct: 112779 atatttttgaccaataattt 112760
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>emb|AL357514.19| Human DNA sequence from clone RP1-105O18 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 140630

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ttgaccaataatttgtctaa 121
             ||||||||||||||||||||
Sbjct: 18133 ttgaccaataatttgtctaa 18114
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>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24
          Length = 299050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 529  ggtggccgaagagggcggcgtgttgatc 556
            |||| ||||||||||||| |||||||||
Sbjct: 5098 ggtgcccgaagagggcggtgtgttgatc 5125
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>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown,
            complete sequence
          Length = 201789

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 511  ggaattggctcatgatgggg 530
            ||||||||||||||||||||
Sbjct: 5464 ggaattggctcatgatgggg 5483
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>gb|AC023711.5| Drosophila melanogaster X BAC RP98-6C4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174157

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 486    atgttgttgccgctgctgtt 505
              ||||||||||||||||||||
Sbjct: 101777 atgttgttgccgctgctgtt 101758
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>gb|AC023685.4| Drosophila melanogaster 3L BAC RP98-20N12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167926

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 486    atgttgttgccgctgctgtt 505
              ||||||||||||||||||||
Sbjct: 131191 atgttgttgccgctgctgtt 131172
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>gb|AF511750.1| Hepatitis C virus isolate XF24 partial sequence
          Length = 1020

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 tgcaaggtgttgttgccgac 304
           ||||||||||||||||||||
Sbjct: 914 tgcaaggtgttgttgccgac 895
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 600    gctagcgagtagtcgttgag 619
              ||||||||||||||||||||
Sbjct: 426782 gctagcgagtagtcgttgag 426801
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>ref|NM_144220.1| Drosophila melanogaster CG12714-RB (CG12714), mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 atgttgttgccgctgctgtt 505
           ||||||||||||||||||||
Sbjct: 1   atgttgttgccgctgctgtt 20
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>gb|AC008533.9| Homo sapiens chromosome 5 clone CTC-483L24, complete sequence
          Length = 254730

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 511    ggaattggctcatgatgggg 530
              ||||||||||||||||||||
Sbjct: 242710 ggaattggctcatgatgggg 242729
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>gb|AC078957.16| Homo sapiens Xp BAC RP11-339E16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 198088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    caatccctttccctatatattttt 103
             |||| |||||||||||||||||||
Sbjct: 34597 caattcctttccctatatattttt 34574
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 531     tggccgaagagggcggcgtg 550
               ||||||||||||||||||||
Sbjct: 1880719 tggccgaagagggcggcgtg 1880700
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>ref|XM_394771.2| PREDICTED: Apis mellifera insulin-like receptor precursor (InR),
           mRNA
          Length = 6126

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 atgttgttgccgctgctgtt 505
           ||||||||||||||||||||
Sbjct: 1   atgttgttgccgctgctgtt 20
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>gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chromosome unknown,
             complete sequence
          Length = 166310

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   ggaattggctcatgatgggg 530
             ||||||||||||||||||||
Sbjct: 61690 ggaattggctcatgatgggg 61709
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>emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 in linkage group 1,
              complete sequence
          Length = 207004

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     tccctttccctatatatttttgac 106
              ||||||||||||| ||||||||||
Sbjct: 136192 tccctttccctatttatttttgac 136215
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>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
              sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 486    atgttgttgccgctgctgtt 505
              ||||||||||||||||||||
Sbjct: 187876 atgttgttgccgctgctgtt 187857
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>emb|BX005199.10| Zebrafish DNA sequence from clone DKEY-12I13 in linkage group 20,
             complete sequence
          Length = 119113

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    atatttttgaccaataattt 115
             ||||||||||||||||||||
Sbjct: 39435 atatttttgaccaataattt 39454
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 579     ccgctgtcgtcgaagagctg 598
               ||||||||||||||||||||
Sbjct: 4540984 ccgctgtcgtcgaagagctg 4540965
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>gb|AF067496.1|AF067496 Leishmania donovani aminophospholipid translocase (APLT1) gene,
            complete cds
          Length = 6640

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 260  gagcagcggctggcccagtgacccctgc 287
            |||||||||||||| ||||| |||||||
Sbjct: 6560 gagcagcggctggcgcagtggcccctgc 6587
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>emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, complete sequence
          Length = 172332

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 80     caatccctttccctatatattttt 103
              |||| |||||||||||||||||||
Sbjct: 139154 caattcctttccctatatattttt 139177
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>gb|DQ084248.1| Uncultured bacterium BAC-L1N9, complete sequence of BAC
          Length = 25361

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   ctgcgacatgttgttgccgc 498
             ||||||||||||||||||||
Sbjct: 22363 ctgcgacatgttgttgccgc 22344
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>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete
             sequence
          Length = 166167

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 497   gctgctgttcacatggaattggct 520
             |||| |||||||||||||||||||
Sbjct: 64811 gctgatgttcacatggaattggct 64834
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>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete
             sequence
          Length = 187252

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 483   gacatgttgttgccgctgctgttc 506
             ||||||||||||| ||||||||||
Sbjct: 59263 gacatgttgttgctgctgctgttc 59286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,822,595
Number of Sequences: 3902068
Number of extensions: 4822595
Number of successful extensions: 89874
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89597
Number of HSP's gapped (non-prelim): 277
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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