ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal11a23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TA2R5_PANTR (Q646A4) Taste receptor type 2 member 5 (T2R5) 31 4.1
2TA2R5_PANPA (Q646D5) Taste receptor type 2 member 5 (T2R5) 31 4.1
3TA2R5_PAPHA (Q646E6) Taste receptor type 2 member 5 (T2R5) 30 9.1
4TA2R5_HUMAN (Q9NYW4) Taste receptor type 2 member 5 (T2R5) 30 9.1
5TA2R5_GORGO (Q645Z1) Taste receptor type 2 member 5 (T2R5) 30 9.1

>TA2R5_PANTR (Q646A4) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
 Frame = -1

Query: 514 REW-----FSCSNVILVGSVTGCRFVLAW*ALAFGARHLVVCSEKDYLAVLALGWLVS*N 350
           REW     +S  N+I++G + GCRFVL W  +        +     +L  L++ W++   
Sbjct: 33  REWIRKFSWSSYNLIILG-LAGCRFVLQW-LIILDLSLFPLFQSSRWLRYLSIFWVLVSQ 90

Query: 349 LDHWFIFWI---FCPK---------TWSQSTSYSL 281
              WF  ++   +C K          W +  +Y+L
Sbjct: 91  ASLWFATFLSVFYCKKITTFDHPAYLWLKQRAYNL 125



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>TA2R5_PANPA (Q646D5) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
 Frame = -1

Query: 514 REW-----FSCSNVILVGSVTGCRFVLAW*ALAFGARHLVVCSEKDYLAVLALGWLVS*N 350
           REW     +S  N+I++G + GCRFVL W  +        +     +L  L++ W++   
Sbjct: 33  REWIRKFSWSSYNLIILG-LAGCRFVLQW-LIILDLSLFPLFQSSRWLRYLSIFWVLVSQ 90

Query: 349 LDHWFIFWI---FCPK---------TWSQSTSYSL 281
              WF  ++   +C K          W +  +Y+L
Sbjct: 91  ASLWFATFLSVFYCKKITTFDHPAYLWLKQRAYNL 125



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>TA2R5_PAPHA (Q646E6) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
 Frame = -1

Query: 517 IREW-----FSCSNVILVGSVTGCRFVLAW*ALAFGARHLVVCSEKDYLAVLALGWLVS* 353
           +REW     +S  N+I++G + GCRF+L W  +        +     +L  L + W++  
Sbjct: 32  LREWIRKFSWSSYNLIILG-LAGCRFLLQW-LIILDLSLFPLFQSSSWLRYLNVFWVLVS 89

Query: 352 NLDHWFIFWI---FCPK---------TWSQSTSYSL 281
               WF  ++   +C K          W +  +Y+L
Sbjct: 90  QASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNL 125



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>TA2R5_HUMAN (Q9NYW4) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
 Frame = -1

Query: 514 REW-----FSCSNVILVGSVTGCRFVLAW*ALAFGARHLVVCSEKDYLAVLALGWLVS*N 350
           REW     +S  N+I++G + GCRF+L W  +        +     +L  L++ W++   
Sbjct: 33  REWIRKFNWSSYNLIILG-LAGCRFLLQW-LIILDLSLFPLFQSSRWLRYLSIFWVLVSQ 90

Query: 349 LDHWFIFWI---FCPK---------TWSQSTSYSL 281
              WF  ++   +C K          W +  +Y+L
Sbjct: 91  ASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNL 125



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>TA2R5_GORGO (Q645Z1) Taste receptor type 2 member 5 (T2R5)|
          Length = 299

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
 Frame = -1

Query: 514 REW-----FSCSNVILVGSVTGCRFVLAW*ALAFGARHLVVCSEKDYLAVLALGWLVS*N 350
           REW     +S  N+I++G + GCRF+L W  +        +     +L  L++ W++   
Sbjct: 33  REWMRKFNWSSYNLIILG-LAGCRFLLQW-LIILDLSLFPLFQSSRWLRYLSIFWVLVSQ 90

Query: 349 LDHWFIFWI---FCPK---------TWSQSTSYSL 281
              WF  ++   +C K          W +  +Y+L
Sbjct: 91  ASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNL 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,107,674
Number of Sequences: 219361
Number of extensions: 2319091
Number of successful extensions: 5382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5381
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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