| Clone Name | rbaal11a19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2279 Score = 210 bits (106), Expect = 4e-51 Identities = 328/402 (81%) Strand = Plus / Minus Query: 237 actcttttggatgcaaaatgctggcctggatggagcttggagagacacagtgctgctgct 296 ||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||| Sbjct: 1965 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 1906 Query: 297 tagcatgacagtcacaaccgacatcatcggtctatcagctgggtcttcttgaacacacag 356 ||||| ||| |||| | ||||||||| || || || | |||||||||||||||||||| Sbjct: 1905 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 1846 Query: 357 aagtccgatgtgcatgcacttcagcatctggtctccaggagaatggctagtcatggacga 416 ||||||||||| | |||||||| ||||||||||||||| |||| | | |||||| || Sbjct: 1845 gagtccgatgtggacgcacttcaagatctggtctccaggacaatgccccgccatggatga 1786 Query: 417 atccatgatctctacaattgttcccatcgtccagtgctcccagaccaaacttaagagatc 476 |||| | ||| |||| |||||| | |||||||||||| || ||| |||||||||| Sbjct: 1785 atccgcaagctccacaactgttcctgccaaccagtgctcccacactaaagttaagagatc 1726 Query: 477 tacagcttgctcggaatcatatgcgacgctgtttctttttccagtaacgatctccaaaat 536 || | ||||||||| || || | ||| ||||| | |||| || ||||| || ||||| Sbjct: 1725 aaccgattgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaat 1666 Query: 537 caagacgccgaagctgaatacgtccgacttgatagagtaactcccacgcatagcatactc 596 || ||||| |||||||| || || || ||||| |||||| ||| |||||||| ||||| Sbjct: 1665 cagaacgccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactc 1606 Query: 597 gggggccatgtatccgtaggttccgacgacacggttggtgac 638 |||||||||||||| || |||||||| |||||||| ||||| Sbjct: 1605 aggggccatgtatccatatgttccgacaacacggttcgtgac 1564
>dbj|AK100849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123I07, full insert sequence Length = 2279 Score = 210 bits (106), Expect = 4e-51 Identities = 328/402 (81%) Strand = Plus / Minus Query: 237 actcttttggatgcaaaatgctggcctggatggagcttggagagacacagtgctgctgct 296 ||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||| Sbjct: 1964 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 1905 Query: 297 tagcatgacagtcacaaccgacatcatcggtctatcagctgggtcttcttgaacacacag 356 ||||| ||| |||| | ||||||||| || || || | |||||||||||||||||||| Sbjct: 1904 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 1845 Query: 357 aagtccgatgtgcatgcacttcagcatctggtctccaggagaatggctagtcatggacga 416 ||||||||||| | |||||||| ||||||||||||||| |||| | | |||||| || Sbjct: 1844 gagtccgatgtggacgcacttcaagatctggtctccaggacaatgccccgccatggatga 1785 Query: 417 atccatgatctctacaattgttcccatcgtccagtgctcccagaccaaacttaagagatc 476 |||| | ||| |||| |||||| | |||||||||||| || ||| |||||||||| Sbjct: 1784 atccgcaagctccacaactgttcctgccaaccagtgctcccacactaaagttaagagatc 1725 Query: 477 tacagcttgctcggaatcatatgcgacgctgtttctttttccagtaacgatctccaaaat 536 || | ||||||||| || || | ||| ||||| | |||| || ||||| || ||||| Sbjct: 1724 aaccgattgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaat 1665 Query: 537 caagacgccgaagctgaatacgtccgacttgatagagtaactcccacgcatagcatactc 596 || ||||| |||||||| || || || ||||| |||||| ||| |||||||| ||||| Sbjct: 1664 cagaacgccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactc 1605 Query: 597 gggggccatgtatccgtaggttccgacgacacggttggtgac 638 |||||||||||||| || |||||||| |||||||| ||||| Sbjct: 1604 aggggccatgtatccatatgttccgacaacacggttcgtgac 1563
>dbj|AK111109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-A05, full insert sequence Length = 770 Score = 188 bits (95), Expect = 2e-44 Identities = 326/402 (81%), Gaps = 2/402 (0%) Strand = Plus / Minus Query: 237 actcttttggatgcaaaatgctggcctggatggagcttggagagacacagtgctgctgct 296 ||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||| Sbjct: 461 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 402 Query: 297 tagcatgacagtcacaaccgacatcatcggtctatcagctgggtcttcttgaacacacag 356 ||||| ||| |||| | ||||||||| || || || | |||||||||||||||||||| Sbjct: 401 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 342 Query: 357 aagtccgatgtgcatgcacttcagcatctggtctccaggagaatggctagtcatggacga 416 ||||||| || | |||||||| ||||||||||||||| |||| | | |||||| || Sbjct: 341 gagtccga--tggacgcacttcaagatctggtctccaggacaatgccccgccatggatga 284 Query: 417 atccatgatctctacaattgttcccatcgtccagtgctcccagaccaaacttaagagatc 476 |||| | ||| |||| |||||| | |||||||||||| || ||| |||||||||| Sbjct: 283 atccgcaagctccacaactgttcctgccaaccagtgctcccacactaaagttaagagatc 224 Query: 477 tacagcttgctcggaatcatatgcgacgctgtttctttttccagtaacgatctccaaaat 536 || | ||||||||| || || | ||| ||||| | |||| || ||||| || ||||| Sbjct: 223 aaccgattgctcggagtcgtaggagacattgtttttccttcccgtgacgatttctaaaat 164 Query: 537 caagacgccgaagctgaatacgtccgacttgatagagtaactcccacgcatagcatactc 596 || ||||| |||||||| || || || ||||| |||||| ||| |||||||| ||||| Sbjct: 163 cagaacgccaaagctgaaaacatctgatttgatggagtaatgcccgcgcatagcgtactc 104 Query: 597 gggggccatgtatccgtaggttccgacgacacggttggtgac 638 |||||||||||||| || |||||||| |||||||| ||||| Sbjct: 103 aggggccatgtatccatatgttccgacaacacggttcgtgac 62
>ref|NM_185884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2088 Score = 155 bits (78), Expect = 2e-34 Identities = 189/226 (83%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||||| ||| |||||||| ||||||||||| ||||||||| ||| Sbjct: 1951 aaaatgatggcttggatggagattgaagagacactgtgctgctgctaagcatgacattca 1892 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||||||| ||||||| |||||||||||||| || || ||||| | Sbjct: 1891 ctgttgacatcataggtctatctgctgggttatcttgaacacacagtagcccaatgtgaa 1832 Query: 371 tgcacttcagcatctggtctccaggagaatggctagtcatggacgaatccatgatctcta 430 | ||||| ||||||||||||| ||||| |||||| || | || | |||||| ||||| | Sbjct: 1831 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 1772 Query: 431 caattgttcccatcgtccagtgctcccagaccaaacttaagagatc 476 |||||||||||| |||||||||||||| || | ||||| |||||| Sbjct: 1771 aaattgttcccatggtccagtgctcccatacaagacttaggagatc 1726
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 153 bits (77), Expect = 9e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 237 actcttttggatgcaaaatgctggcctggatggagcttggagagacacagtgctgctgct 296 ||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||| Sbjct: 21056034 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 21055975 Query: 297 tagcatgacagtcacaaccgacatcatcggtctatcagctgggtcttcttgaacacacag 356 ||||| ||| |||| | ||||||||| || || || | |||||||||||||||||||| Sbjct: 21055974 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 21055915 Query: 357 aagtccgatgtgcatgcacttcagcatctggtctccaggagaatg 401 ||||||||||| | |||||||| ||||||||||||||| |||| Sbjct: 21055914 gagtccgatgtggacgcacttcaagatctggtctccaggacaatg 21055870 Score = 151 bits (76), Expect = 3e-33 Identities = 175/208 (84%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||||| ||| |||||||| ||||||||||| ||||||||| ||| Sbjct: 21071250 aaaatgatggcttggatggagattgaagagacactgtgctgctgctaagcatgacattca 21071191 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||||||| ||||||| |||||||||||||| || || ||||| | Sbjct: 21071190 ctgttgacatcataggtctatctgctgggttatcttgaacacacagtagcccaatgtgaa 21071131 Query: 371 tgcacttcagcatctggtctccaggagaatggctagtcatggacgaatccatgatctcta 430 | ||||| ||||||||||||| ||||| |||||| || | || | |||||| ||||| | Sbjct: 21071130 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 21071071 Query: 431 caattgttcccatcgtccagtgctccca 458 |||||||||||| |||||||||||||| Sbjct: 21071070 aaattgttcccatggtccagtgctccca 21071043 Score = 119 bits (60), Expect = 1e-23 Identities = 171/208 (82%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 21078803 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 21078744 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||| ||| ||||||| |||||||||||||| || || ||||| | Sbjct: 21078743 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 21078684 Query: 371 tgcacttcagcatctggtctccaggagaatggctagtcatggacgaatccatgatctcta 430 | ||||| ||||||||||||| ||||| |||||| || | || | |||||| ||||| | Sbjct: 21078683 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 21078624 Query: 431 caattgttcccatcgtccagtgctccca 458 |||||||||||| |||||||||||||| Sbjct: 21078623 aaattgttcccatggtccagtgctccca 21078596 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttgatagagtaactcccacgcatagcatactcgggg 600 |||||||||||||| |||||||| ||||| || ||| | ||||||||||| || || || Sbjct: 21326924 acgccgaagctgaacacgtccgatttgattgaataattaccacgcatagcgtattctggt 21326865 Query: 601 gccatgtatcc 611 ||||||||||| Sbjct: 21326864 gccatgtatcc 21326854 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ttatctcggctcaagttcagtaatcgaaacttcgtttggtgacataggtgatct 176 |||||| |||||||| ||||| |||||||| || |||||||||||||| ||||| Sbjct: 21056754 ttatcttggctcaagctcagtgatcgaaacctcatttggtgacataggcgatct 21056701 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 540 gacgccgaagctgaatacgtccgacttgatagagtaactcccacg 584 ||||||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 21116353 gacgccgaagctgaatacgtctgacttgacagagtagttcccacg 21116309 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 ||||| || ||||||| ||||| |||||||| || || || ||||| |||||| ||| Sbjct: 21055646 acgatttctaaaatcagaacgccaaagctgaaaacatctgatttgatggagtaatgcccg 21055587 Query: 583 cgcatagcatactcgggggccatgtatcc 611 |||||||| ||||| |||||||||||||| Sbjct: 21055586 cgcatagcgtactcaggggccatgtatcc 21055558 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| ||||| ||||| | ||||| |||| Sbjct: 21242397 acgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgccca 21242456 Query: 583 cgcatagcatactcgggggccatgtatcc 611 ||||| || ||||| || ||||||||||| Sbjct: 21242457 cgcatcgcgtactctggcgccatgtatcc 21242485 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 525 gatctccaaaatcaagacgccgaagctgaatacgtccgactt 566 ||||||||||| ||| || ||||||||| ||||||| ||||| Sbjct: 25999374 gatctccaaaagcaacacaccgaagctgtatacgtcagactt 25999415 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttga 568 |||||||||| | || ||||||||||||||| ||||| ||||||| Sbjct: 21080340 acgatctccagcaccatgacgccgaagctgaacacgtcggacttga 21080385 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 |||||||||||| ||||| ||||| |||||||| Sbjct: 20907980 caagacgccgaaactgaagacgtctgacttgat 20907948 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 ||||||||| || ||||| |||||||||||||| Sbjct: 7401724 caagacgccaaaactgaagacgtccgacttgat 7401692 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaa 554 ||||||||||| | || ||||||||||||||| Sbjct: 26006752 acgatctccaagaccaggacgccgaagctgaa 26006783 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||| ||||||| Sbjct: 20995578 acgccgaagctgaacacgtcggacttga 20995551
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 153 bits (77), Expect = 9e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 237 actcttttggatgcaaaatgctggcctggatggagcttggagagacacagtgctgctgct 296 ||||||||||||||||||||| ||||| ||||||||||| | |||||| ||||||||||| Sbjct: 99333 actcttttggatgcaaaatgccggcctagatggagcttgtaaagacacggtgctgctgct 99274 Query: 297 tagcatgacagtcacaaccgacatcatcggtctatcagctgggtcttcttgaacacacag 356 ||||| ||| |||| | ||||||||| || || || | |||||||||||||||||||| Sbjct: 99273 aagcatcacattcaccatcgacatcattggcctctccgtggggtcttcttgaacacacag 99214 Query: 357 aagtccgatgtgcatgcacttcagcatctggtctccaggagaatg 401 ||||||||||| | |||||||| ||||||||||||||| |||| Sbjct: 99213 gagtccgatgtggacgcacttcaagatctggtctccaggacaatg 99169 Score = 151 bits (76), Expect = 3e-33 Identities = 175/208 (84%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||||| ||| |||||||| ||||||||||| ||||||||| ||| Sbjct: 114549 aaaatgatggcttggatggagattgaagagacactgtgctgctgctaagcatgacattca 114490 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||||||| ||||||| |||||||||||||| || || ||||| | Sbjct: 114489 ctgttgacatcataggtctatctgctgggttatcttgaacacacagtagcccaatgtgaa 114430 Query: 371 tgcacttcagcatctggtctccaggagaatggctagtcatggacgaatccatgatctcta 430 | ||||| ||||||||||||| ||||| |||||| || | || | |||||| ||||| | Sbjct: 114429 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 114370 Query: 431 caattgttcccatcgtccagtgctccca 458 |||||||||||| |||||||||||||| Sbjct: 114369 aaattgttcccatggtccagtgctccca 114342 Score = 119 bits (60), Expect = 1e-23 Identities = 171/208 (82%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 122102 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 122043 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||| ||| ||||||| |||||||||||||| || || ||||| | Sbjct: 122042 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 121983 Query: 371 tgcacttcagcatctggtctccaggagaatggctagtcatggacgaatccatgatctcta 430 | ||||| ||||||||||||| ||||| |||||| || | || | |||||| ||||| | Sbjct: 121982 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 121923 Query: 431 caattgttcccatcgtccagtgctccca 458 |||||||||||| |||||||||||||| Sbjct: 121922 aaattgttcccatggtccagtgctccca 121895 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 123 ttatctcggctcaagttcagtaatcgaaacttcgtttggtgacataggtgatct 176 |||||| |||||||| ||||| |||||||| || |||||||||||||| ||||| Sbjct: 100053 ttatcttggctcaagctcagtgatcgaaacctcatttggtgacataggcgatct 100000 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 ||||| || ||||||| ||||| |||||||| || || || ||||| |||||| ||| Sbjct: 98945 acgatttctaaaatcagaacgccaaagctgaaaacatctgatttgatggagtaatgcccg 98886 Query: 583 cgcatagcatactcgggggccatgtatcc 611 |||||||| ||||| |||||||||||||| Sbjct: 98885 cgcatagcgtactcaggggccatgtatcc 98857 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttga 568 |||||||||| | || ||||||||||||||| ||||| ||||||| Sbjct: 123639 acgatctccagcaccatgacgccgaagctgaacacgtcggacttga 123684 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||| ||||||| Sbjct: 38877 acgccgaagctgaacacgtcggacttga 38850
>ref|NM_185885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2022 Score = 119 bits (60), Expect = 1e-23 Identities = 171/208 (82%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 1894 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 1835 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||| ||| ||||||| |||||||||||||| || || ||||| | Sbjct: 1834 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 1775 Query: 371 tgcacttcagcatctggtctccaggagaatggctagtcatggacgaatccatgatctcta 430 | ||||| ||||||||||||| ||||| |||||| || | || | |||||| ||||| | Sbjct: 1774 tacacttgagcatctggtctcgaggagcatggcttgtaagagagggatccatcatctcca 1715 Query: 431 caattgttcccatcgtccagtgctccca 458 |||||||||||| |||||||||||||| Sbjct: 1714 aaattgttcccatggtccagtgctccca 1687
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 91.7 bits (46), Expect = 3e-15 Identities = 127/154 (82%) Strand = Plus / Minus Query: 251 aaaatgctggcctggatggagcttggagagacacagtgctgctgcttagcatgacagtca 310 |||||| |||| ||||||| | ||| |||||||| ||| ||||||| ||||||| | ||| Sbjct: 164 aaaatgatggcttggatggggattgaagagacactgtgttgctgctaagcatgatattca 105 Query: 311 caaccgacatcatcggtctatcagctgggtcttcttgaacacacagaagtccgatgtgca 370 | |||||||| |||| ||| ||||||| |||||||||||||| || || ||||| | Sbjct: 104 ctgttgacatcataggtcgatctgctgggttatcttgaacacacagtagcccaatgtgaa 45 Query: 371 tgcacttcagcatctggtctccaggagaatggct 404 | ||||| ||||||||||||| ||||| |||||| Sbjct: 44 tacacttgagcatctggtctcgaggagcatggct 11 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 540 gacgccgaagctgaatacgtccgacttgatagagtaactcccacg 584 ||||||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 37714 gacgccgaagctgaatacgtctgacttgacagagtagttcccacg 37670 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| ||||| ||||| | ||||| |||| Sbjct: 163758 acgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgccca 163817 Query: 583 cgcatagcatactcgggggccatgtatcc 611 ||||| || ||||| || ||||||||||| Sbjct: 163818 cgcatcgcgtactctggcgccatgtatcc 163846 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttga 568 |||||||||| | || ||||||||||||||| ||||| ||||||| Sbjct: 1701 acgatctccagcaccatgacgccgaagctgaacacgtcggacttga 1746
>dbj|D21298.1|RICSS258 Oryza sativa SS258 mRNA for receptor protein kinase, partial sequence Length = 403 Score = 85.7 bits (43), Expect = 2e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 344 cttgaacacacagaagtccgatgtgcatgcacttcagcatctggtctccaggagaatggc 403 ||||||||||||| || || ||||| || ||||| ||||||||||||| ||||| ||||| Sbjct: 304 cttgaacacacagtagcccaatgtgaatacacttgagcatctggtctcgaggagcatggc 245 Query: 404 tagtcatggacgaatccatgatctctacaattgttcccatcgtccagtgctccca 458 | || | || | |||||| ||||| | |||||||||||| |||||||||||||| Sbjct: 244 ttgtaagagagggatccatcatctccaaaattgttcccatggtccagtgctccca 190
>ref|XM_478592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2109 Score = 65.9 bits (33), Expect = 2e-07 Identities = 141/177 (79%) Strand = Plus / Minus Query: 445 gtccagtgctcccagaccaaacttaagagatctacagcttgctcggaatcatatgcgacg 504 |||||||||||||| || | |||||||||| ||| ||||| | |||||||| | | Sbjct: 1775 gtccagtgctcccacactaggtttaagagatcaacatcttgcccactatcatatgagcca 1716 Query: 505 ctgtttctttttccagtaacgatctccaaaatcaagacgccgaagctgaatacgtccgac 564 |||||||| |||| || | ||||| || | ||| |||||||||||||| |||||||| Sbjct: 1715 gtgtttcttcttccggtgataatctctaataccaaaacgccgaagctgaacacgtccgat 1656 Query: 565 ttgatagagtaactcccacgcatagcatactcgggggccatgtatccgtaggttccg 621 ||||| || ||| | ||||||||||| || || || ||||||||||| || |||||| Sbjct: 1655 ttgattgaataattaccacgcatagcgtattctggtgccatgtatccatatgttccg 1599
>dbj|AK111650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130K01, full insert sequence Length = 2340 Score = 65.9 bits (33), Expect = 2e-07 Identities = 141/177 (79%) Strand = Plus / Minus Query: 445 gtccagtgctcccagaccaaacttaagagatctacagcttgctcggaatcatatgcgacg 504 |||||||||||||| || | |||||||||| ||| ||||| | |||||||| | | Sbjct: 1795 gtccagtgctcccacactaggtttaagagatcaacatcttgcccactatcatatgagcca 1736 Query: 505 ctgtttctttttccagtaacgatctccaaaatcaagacgccgaagctgaatacgtccgac 564 |||||||| |||| || | ||||| || | ||| |||||||||||||| |||||||| Sbjct: 1735 gtgtttcttcttccggtgataatctctaataccaaaacgccgaagctgaacacgtccgat 1676 Query: 565 ttgatagagtaactcccacgcatagcatactcgggggccatgtatccgtaggttccg 621 ||||| || ||| | ||||||||||| || || || ||||||||||| || |||||| Sbjct: 1675 ttgattgaataattaccacgcatagcgtattctggtgccatgtatccatatgttccg 1619
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttgatagagtaactcccacgcatagcatactcgggg 600 |||||||||||||| |||||||| ||||| || ||| | ||||||||||| || || || Sbjct: 47092 acgccgaagctgaacacgtccgatttgattgaataattaccacgcatagcgtattctggt 47033 Query: 601 gccatgtatcc 611 ||||||||||| Sbjct: 47032 gccatgtatcc 47022
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttgatagagtaactcccacgcatagcatactcgggg 600 |||||||||||||| |||||||| ||||| || ||| | ||||||||||| || || || Sbjct: 113209 acgccgaagctgaacacgtccgatttgattgaataattaccacgcatagcgtattctggt 113150 Query: 601 gccatgtatcc 611 ||||||||||| Sbjct: 113149 gccatgtatcc 113139 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| ||||| ||||| | ||||| |||| Sbjct: 28682 acgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgccca 28741 Query: 583 cgcatagcatactcgggggccatgtatcc 611 ||||| || ||||| || ||||||||||| Sbjct: 28742 cgcatcgcgtactctggcgccatgtatcc 28770
>ref|XM_478556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1917 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 540 gacgccgaagctgaatacgtccgacttgatagagtaactcccacg 584 ||||||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 1548 gacgccgaagctgaatacgtctgacttgacagagtagttcccacg 1504
>ref|XM_478577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2439 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| ||||| ||||| | ||||| |||| Sbjct: 1765 acgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgccca 1706 Query: 583 cgcatagcatactcgggggccatgtatcc 611 ||||| || ||||| || ||||||||||| Sbjct: 1705 cgcatcgcgtactctggcgccatgtatcc 1677
>dbj|AK112096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H06, full insert sequence Length = 1304 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 540 gacgccgaagctgaatacgtccgacttga 568 ||||||||||||||||||||| ||||||| Sbjct: 661 gacgccgaagctgaatacgtctgacttga 633
>dbj|AK101714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060N20, full insert sequence Length = 2438 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| ||||| ||||| | ||||| |||| Sbjct: 1764 acgatctccaggaccaggacgccgaagctgaacacgtctgacttaacggagtagtgccca 1705 Query: 583 cgcatagcatactcgggggccatgtatcc 611 ||||| || ||||| || ||||||||||| Sbjct: 1704 cgcatcgcgtactctggcgccatgtatcc 1676
>ref|NM_118460.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G23310 mRNA, complete cds Length = 2493 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 585 catagcatactcgggggccatgtatccgtaggttcc 620 ||||||||||||||| |||||||| || |||||||| Sbjct: 2049 catagcatactcgggagccatgtaaccataggttcc 2014
>ref|XM_463825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1914 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 1423 acgccgaagctgaacacgtccgacttga 1396
>ref|XM_463826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2277 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 1696 acgccgaagctgaacacgtccgacttga 1669
>ref|XM_463824.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 1360 acgccgaagctgaacacgtccgacttga 1333
>ref|NM_191517.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2424 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Minus Query: 585 catagcatactcgggggccatgtatccgtaggttccgacgacacggttggtg 636 |||||||||||| || ||||||||||| || ||||| || || ||||||||| Sbjct: 2001 catagcatactccggagccatgtatccatatgttccaacaacccggttggtg 1950
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 566670 acgccgaagctgaacacgtccgacttga 566697
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 44723 acgccgaagctgaacacgtccgacttga 44750
>dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A22, full insert sequence Length = 2277 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 1696 acgccgaagctgaacacgtccgacttga 1669
>dbj|AK069727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K11, full insert sequence Length = 1940 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 1360 acgccgaagctgaacacgtccgacttga 1333
>dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E02, full insert sequence Length = 1914 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||||||||||| Sbjct: 1423 acgccgaagctgaacacgtccgacttga 1396
>ref|NM_118445.2| Arabidopsis thaliana kinase AT4G23160 mRNA, complete cds Length = 3890 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 584 gcatagcatactcgggggccatgtatccgtaggt 617 |||| ||||||||||| |||||||| |||||||| Sbjct: 3343 gcatcgcatactcgggagccatgtaaccgtaggt 3310
>ref|XM_479226.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2013 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 525 gatctccaaaatcaagacgccgaagctgaatacgtccgactt 566 ||||||||||| ||| || ||||||||| ||||||| ||||| Sbjct: 1599 gatctccaaaagcaacacaccgaagctgtatacgtcagactt 1558
>ref|XM_478590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 579 cccacgcatagcatactcgggggccatgtatccgtaggttcc 620 ||||||||| || ||||| || |||||||||||||| ||||| Sbjct: 1641 cccacgcatggcgtactccggcgccatgtatccgtatgttcc 1600
>ref|NM_185886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttga 568 |||||||||| | || ||||||||||||||| ||||| ||||||| Sbjct: 1508 acgatctccagcaccatgacgccgaagctgaacacgtcggacttga 1463
>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence Length = 135959 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 342 ttcttgaacacacagaagtccgatgtgcatgcac 375 |||||| ||||| |||||||||||||| |||||| Sbjct: 31625 ttcttgtacacaaagaagtccgatgtgtatgcac 31658 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 342 ttcttgaacacacagaagtccgatgtgcatgcac 375 |||||| ||||| |||||||| |||||||||||| Sbjct: 11247 ttcttgcacacaaagaagtcctatgtgcatgcac 11280
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 525 gatctccaaaatcaagacgccgaagctgaatacgtccgactt 566 ||||||||||| ||| || ||||||||| ||||||| ||||| Sbjct: 76386 gatctccaaaagcaacacaccgaagctgtatacgtcagactt 76427 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaa 554 ||||||||||| | || ||||||||||||||| Sbjct: 83764 acgatctccaagaccaggacgccgaagctgaa 83795
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 525 gatctccaaaatcaagacgccgaagctgaatacgtccgactt 566 ||||||||||| ||| || ||||||||| ||||||| ||||| Sbjct: 32936 gatctccaaaagcaacacaccgaagctgtatacgtcagactt 32977 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 523 acgatctccaaaatcaagacgccgaagctgaa 554 ||||||||||| | || ||||||||||||||| Sbjct: 40314 acgatctccaagaccaggacgccgaagctgaa 40345
>dbj|AK111734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041L05, full insert sequence Length = 2148 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttga 568 |||||||||| | || ||||||||||||||| ||||| ||||||| Sbjct: 1660 acgatctccagcaccatgacgccgaagctgaacacgtcggacttga 1615
>dbj|AK111594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C19, full insert sequence Length = 2366 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 525 gatctccaaaatcaagacgccgaagctgaatacgtccgactt 566 ||||||||||| ||| || ||||||||| ||||||| ||||| Sbjct: 1721 gatctccaaaagcaacacaccgaagctgtatacgtcagactt 1680
>ref|NM_116325.3| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G00970 mRNA, complete cds Length = 1998 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 580 ccacgcatagcatactcgggggccatgtatccgtaggttcc 620 |||| ||| |||||||| || |||||||| ||||||||||| Sbjct: 1568 ccactcattgcatactctggagccatgtaaccgtaggttcc 1528
>ref|XM_475473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2043 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 592 tactcgggggccatgtatccgtaggttcc 620 ||||| || |||||||||||||||||||| Sbjct: 1607 tactccggcgccatgtatccgtaggttcc 1579
>ref|XM_478554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2253 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| |||| ||||||| ||||| | ||| Sbjct: 1777 acgatctccagcaccatgacgccgaagctgaacgcgtctgacttgacggagtagttgcca 1718 Query: 583 cgcatagcatactcgggggccatgtatccgtaggttccgacgacacggttggtgaca 639 ||||| ||||| || |||||||| || || || ||||||||||||| |||||| Sbjct: 1717 cgcatcatgtactcaggtgccatgtacccatatgtgtcgacgacacggttcgtgaca 1661
>ref|XM_506393.1| PREDICTED Oryza sativa (japonica cultivar-group), P0696F12.4 mRNA Length = 2383 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| |||| ||||||| ||||| | ||| Sbjct: 1907 acgatctccagcaccatgacgccgaagctgaacgcgtctgacttgacggagtagttgcca 1848 Query: 583 cgcatagcatactcgggggccatgtatccgtaggttccgacgacacggttggtgaca 639 ||||| ||||| || |||||||| || || || ||||||||||||| |||||| Sbjct: 1847 cgcatcatgtactcaggtgccatgtacccatatgtgtcgacgacacggttcgtgaca 1791
>ref|XM_477200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 ||||||||| || ||||| |||||||||||||| Sbjct: 1518 caagacgccaaaactgaagacgtccgacttgat 1486
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 tggatgcaaaatgctggcctg 264 ||||||||||||||||||||| Sbjct: 4320246 tggatgcaaaatgctggcctg 4320266
>ref|XM_500081.1| Yarrowia lipolytica CLIB122, YALI0A15026g predicted mRNA Length = 510 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 cctggatggagcttggagaga 281 ||||||||||||||||||||| Sbjct: 278 cctggatggagcttggagaga 298
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 580 ccacgcatagcatactcgggggccatgtatccg 612 |||||||| |||||||| || |||||||||||| Sbjct: 10739862 ccacgcattgcatactcaggagccatgtatccg 10739830
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 |||||||||||| ||||| ||||| |||||||| Sbjct: 118770 caagacgccgaaactgaagacgtctgacttgat 118738
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 580 ccacgcatagcatactcgggggccatgtatccg 612 |||||||| |||||||| || |||||||||||| Sbjct: 76480 ccacgcattgcatactcaggagccatgtatccg 76448
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 ||||||||| || ||||| |||||||||||||| Sbjct: 128405 caagacgccaaaactgaagacgtccgacttgat 128373
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 |||||||||||| ||||| ||||| |||||||| Sbjct: 35895 caagacgccgaaactgaagacgtctgacttgat 35863
>dbj|AK110461.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F11, full insert sequence Length = 2096 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 592 tactcgggggccatgtatccgtaggttccgacgacacggttggtg 636 ||||| || ||||||||||| ||||| |||||||| | ||||||| Sbjct: 1805 tactcaggagccatgtatccataggtgccgacgactctgttggtg 1761 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 541 acgccgaagctgaatacgtccgacttga 568 |||||||||||||| ||||| ||||||| Sbjct: 1856 acgccgaagctgaacacgtcggacttga 1829
>dbj|AK110420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-A03, full insert sequence Length = 2402 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 592 tactcgggggccatgtatccgtaggttcc 620 ||||| || |||||||||||||||||||| Sbjct: 1704 tactccggcgccatgtatccgtaggttcc 1676
>dbj|AK103518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131H17, full insert sequence Length = 2383 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| |||| ||||||| ||||| | ||| Sbjct: 1907 acgatctccagcaccatgacgccgaagctgaacgcgtctgacttgacggagtagttgcca 1848 Query: 583 cgcatagcatactcgggggccatgtatccgtaggttccgacgacacggttggtgaca 639 ||||| ||||| || |||||||| || || || ||||||||||||| |||||| Sbjct: 1847 cgcatcatgtactcaggtgccatgtacccatatgtgtcgacgacacggttcgtgaca 1791
>dbj|AK102249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088G15, full insert sequence Length = 2253 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaatacgtccgacttgatagagtaactccca 582 |||||||||| | || ||||||||||||||| |||| ||||||| ||||| | ||| Sbjct: 1777 acgatctccagcaccatgacgccgaagctgaacgcgtctgacttgacggagtagttgcca 1718 Query: 583 cgcatagcatactcgggggccatgtatccgtaggttccgacgacacggttggtgaca 639 ||||| ||||| || |||||||| || || || ||||||||||||| |||||| Sbjct: 1717 cgcatcatgtactcaggtgccatgtacccatatgtgtcgacgacacggttcgtgaca 1661
>dbj|AK072564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134B04, full insert sequence Length = 2077 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 537 caagacgccgaagctgaatacgtccgacttgat 569 |||||||||||| ||||| ||||| |||||||| Sbjct: 1499 caagacgccgaaactgaagacgtctgacttgat 1467
>dbj|AK066121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057L06, full insert sequence Length = 3370 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 580 ccacgcatagcatactcgggggccatgtatccg 612 |||||||| |||||||| || |||||||||||| Sbjct: 2702 ccacgcattgcatactcaggagccatgtatccg 2670
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 cctggatggagcttggagaga 281 ||||||||||||||||||||| Sbjct: 1542925 cctggatggagcttggagaga 1542945
>ref|NM_118457.1| Arabidopsis thaliana kinase AT4G23280 mRNA, complete cds Length = 1971 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 585 catagcatactcgggggccatgtatccgtaggttcc 620 ||||||||||||||| ||||| || || |||||||| Sbjct: 1527 catagcatactcgggagccatataaccataggttcc 1492
>ref|NM_193060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaa 554 ||||||||||| | || ||||||||||||||| Sbjct: 1580 acgatctccaagaccaggacgccgaagctgaa 1549
>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence Length = 242587 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tctctacaattgttcccatc 444 |||||||||||||||||||| Sbjct: 77353 tctctacaattgttcccatc 77372
>gb|AC110744.6| Mus musculus chromosome 8, clone RP23-307G24, complete sequence Length = 183023 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tggatggagcttggagagac 282 |||||||||||||||||||| Sbjct: 102416 tggatggagcttggagagac 102435
>emb|AL157884.9| Human DNA sequence from clone RP11-462B18 on chromosome 9p13.1-21.1 Contains a pseudogene similar to part of membrane guanylyl cyclase, a ribosomal protein S11 (RPS11) pseudogene, a novel gene and a CpG island, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gcatgcacttcagcatctgg 387 |||||||||||||||||||| Sbjct: 159982 gcatgcacttcagcatctgg 160001
>gb|AC158153.3| Mus musculus chromosome 5, clone RP23-119B3, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ctggatggagcttggagaga 281 |||||||||||||||||||| Sbjct: 46253 ctggatggagcttggagaga 46234
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 catagcatactcgggggccatgta 608 ||||||||||||||| |||||||| Sbjct: 41814 catagcatactcgggagccatgta 41791
>emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, BAC clone F16G20 (ESSAII project) Length = 97006 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 catagcatactcgggggccatgta 608 ||||||||||||||| |||||||| Sbjct: 283 catagcatactcgggagccatgta 260
>emb|AL022347.1|ATF21P8 Arabidopsis thaliana DNA chromosome 4, BAC clone F21P8 (ESSA project) Length = 85785 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 catagcatactcgggggccatgta 608 ||||||||||||||| |||||||| Sbjct: 76168 catagcatactcgggagccatgta 76145
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 catctggtctccaggagaat 400 |||||||||||||||||||| Sbjct: 133487 catctggtctccaggagaat 133506
>gb|AC015553.21|AC015553 Homo sapiens 9 BAC RP11-100N10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162063 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gcatgcacttcagcatctgg 387 |||||||||||||||||||| Sbjct: 99479 gcatgcacttcagcatctgg 99498
>gb|AC114802.5| Homo sapiens BAC clone RP11-790N8 from 2, complete sequence Length = 154814 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 aatccatgatctctacaatt 435 |||||||||||||||||||| Sbjct: 133390 aatccatgatctctacaatt 133371
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 catctggtctccaggagaat 400 |||||||||||||||||||| Sbjct: 25868 catctggtctccaggagaat 25849
>gb|AC157908.5| Mus musculus chromosome 18, clone RP24-286P2, complete sequence Length = 161561 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tctctacaattgttcccatc 444 |||||||||||||||||||| Sbjct: 56324 tctctacaattgttcccatc 56305
>dbj|AK111564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N09, full insert sequence Length = 2343 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 523 acgatctccaaaatcaagacgccgaagctgaa 554 ||||||||||| | || ||||||||||||||| Sbjct: 1668 acgatctccaagaccaggacgccgaagctgaa 1637
>emb|AL929033.7| Mouse DNA sequence from clone RP23-427N17 on chromosome 2, complete sequence Length = 164571 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tcttcttgaacacacagaag 359 |||||||||||||||||||| Sbjct: 53819 tcttcttgaacacacagaag 53800
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 catctggtctccaggagaat 400 |||||||||||||||||||| Sbjct: 133305 catctggtctccaggagaat 133324
>gb|AC101857.12| Mus musculus chromosome 5, clone RP23-304E8, complete sequence Length = 167722 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ctggatggagcttggagaga 281 |||||||||||||||||||| Sbjct: 150502 ctggatggagcttggagaga 150483
>emb|AL645530.11| Mouse DNA sequence from clone RP23-92N10 on chromosome 11, complete sequence Length = 91481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tggtagagtgtgaaactcct 198 |||||||||||||||||||| Sbjct: 90687 tggtagagtgtgaaactcct 90706
>emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on chromosome 11, complete sequence Length = 162556 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cacagtgctgctgcttagca 301 |||||||||||||||||||| Sbjct: 133964 cacagtgctgctgcttagca 133983
>emb|AL645484.14| Mouse DNA sequence from clone RP23-38A10 on chromosome 11, complete sequence Length = 161787 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tggtagagtgtgaaactcct 198 |||||||||||||||||||| Sbjct: 1206 tggtagagtgtgaaactcct 1225 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,013,765 Number of Sequences: 3902068 Number of extensions: 6013765 Number of successful extensions: 92205 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 91785 Number of HSP's gapped (non-prelim): 401 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)