>ref|XM_479696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 25   ccagggcacatnctccgtnctgctccaaatggcnagaactg 65
            ||||||||||| || ||| ||| |||||||||| |||||||
Sbjct: 1400 ccagggcacattcttcgtcctgatccaaatggcaagaactg 1360

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 25     ccagggcacatnctccgtnctgctccaaatggcnagaactg 65
              ||||||||||| || ||| ||| |||||||||| |||||||
Sbjct: 314490 ccagggcacattcttcgtcctgatccaaatggcaagaactg 314450

>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 25    ccagggcacatnctccgtnctgctccaaatggcnagaactg 65
             ||||||||||| || ||| ||| |||||||||| |||||||
Sbjct: 24004 ccagggcacattcttcgtcctgatccaaatggcaagaactg 23964

>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 25    ccagggcacatnctccgtnctgctccaaatggcnagaactg 65
             ||||||||||| || ||| ||| |||||||||| |||||||
Sbjct: 80916 ccagggcacattcttcgtcctgatccaaatggcaagaactg 80876

>ref|XM_464369.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1791

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 24   accagggcacatnctccgtnctgctccaaatgg 56
            |||||||||||| || ||| |||||||||||||
Sbjct: 1436 accagggcacatccttcgtcctgctccaaatgg 1404

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 28       gggcacatnctccgtnctgctccaaatgg 56
                |||||||| |||||| |||||||||||||
Sbjct: 25774960 gggcacatcctccgtcctgctccaaatgg 25774932



 Score = 44.1 bits (22), Expect = 0.076
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 25       ccagggcacatnctccgtnctgctccaaatgg 56
                ||||||||||| |||||  |||||||||||||
Sbjct: 25713689 ccagggcacatcctccgacctgctccaaatgg 25713720

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 24      accagggcacatnctccgtnctgctccaaatgg 56
               |||||||||||| || ||| |||||||||||||
Sbjct: 4766829 accagggcacatccttcgtcctgctccaaatgg 4766797

>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_B01
          Length = 129329

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 24    accagggcacatnctccgtnctgctccaaatgg 56
             |||||||||||| || ||| |||||||||||||
Sbjct: 47419 accagggcacatccttcgtcctgctccaaatgg 47387

>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1073_F05
          Length = 124252

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 24   accagggcacatnctccgtnctgctccaaatgg 56
            |||||||||||| || ||| |||||||||||||
Sbjct: 8988 accagggcacatccttcgtcctgctccaaatgg 8956

>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0416A11
          Length = 171519

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 28    gggcacatnctccgtnctgctccaaatgg 56
             |||||||| |||||| |||||||||||||
Sbjct: 57164 gggcacatcctccgtcctgctccaaatgg 57136

>dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020N11, full
            insert sequence
          Length = 2010

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 28   gggcacatnctccgtnctgctccaaatgg 56
            |||||||| |||||| |||||||||||||
Sbjct: 1688 gggcacatcctccgtcctgctccaaatgg 1660

>dbj|AK068907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002L07, full
            insert sequence
          Length = 1791

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 24   accagggcacatnctccgtnctgctccaaatgg 56
            |||||||||||| || ||| |||||||||||||
Sbjct: 1436 accagggcacatccttcgtcctgctccaaatgg 1404

>dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090O06, full
            insert sequence
          Length = 2127

 Score = 46.1 bits (23), Expect = 0.019
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 28   gggcacatnctccgtnctgctccaaatgg 56
            |||||||| |||||| |||||||||||||
Sbjct: 1667 gggcacatcctccgtcctgctccaaatgg 1639

>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E02
          Length = 154458

 Score = 44.1 bits (22), Expect = 0.076
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 25     ccagggcacatnctccgtnctgctccaaatgg 56
              ||||||||||| |||||  |||||||||||||
Sbjct: 137134 ccagggcacatcctccgacctgctccaaatgg 137165

>emb|AJ000231.1|HVJ000231 Hordeum vulgare mRNA for expressed sequence tag
          Length = 160

 Score = 44.1 bits (22), Expect = 0.076
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 14 cgaggttcataccagggcacat 35
          ||||||||||||||||||||||
Sbjct: 31 cgaggttcataccagggcacat 10

>ref|XM_778970.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4203-PA
           (LOC578824), mRNA
          Length = 1752

 Score = 38.2 bits (19), Expect = 4.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  aggttcataccagggcaca 34
           |||||||||||||||||||
Sbjct: 606 aggttcataccagggcaca 624


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 275,330
Number of Sequences: 3902068
Number of extensions: 275330
Number of successful extensions: 11037
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10998
Number of HSP's gapped (non-prelim): 39
length of query: 105
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 84
effective length of database: 17,151,101,840
effective search space: 1440692554560
effective search space used: 1440692554560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)