ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10l14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476668.1| Oryza sativa (japonica cultivar-group), mRNA 129 1e-26
2dbj|AK065458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
4dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5gb|BT017370.1| Zea mays clone EL01N0324H05.c mRNA sequence 48 0.039
6gb|AY108942.1| Zea mays PCO138129 mRNA sequence 48 0.039
7gb|DQ317318.1| Musa acuminata putative glycine-rich protein (GRP... 48 0.039
8gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complet... 46 0.15
9gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete... 46 0.15
10gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome... 46 0.15
11gb|AC100561.13| Mus musculus chromosome 1, clone RP23-154C4, com... 46 0.15
12gb|AC163216.10| Mus musculus chromosome 1, clone RP23-69G5, comp... 46 0.15
13emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chro... 46 0.15
14emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chro... 44 0.61
15gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, co... 44 0.61
16emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in ... 44 0.61
17gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, comp... 42 2.4
18gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, co... 42 2.4
19gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosom... 42 2.4
20gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosom... 42 2.4
21gb|AC117214.3| Mus musculus BAC clone RP23-307B15 from chromosom... 42 2.4
22gb|AC109364.6| Mus musculus BAC clone RP23-127N24 from chromosom... 42 2.4
23gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, co... 42 2.4
24gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete... 42 2.4
25emb|AL606661.23| Mouse DNA sequence from clone RP23-355P23 on ch... 42 2.4
26dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 42 2.4
27gb|AC154306.3| Mus musculus BAC clone RP23-376G3 from 17, comple... 42 2.4
28emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chr... 42 2.4
29emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chro... 42 2.4
30gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome ... 40 9.6
31ref|XM_516456.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 9.6
32gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
33gb|AC122773.8| Mus musculus chromosome 1, clone RP24-160N7, comp... 40 9.6
34gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, comp... 40 9.6
35ref|XM_581684.2| PREDICTED: Bos taurus hypothetical LOC538638 (L... 40 9.6
36gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, c... 40 9.6
37ref|NM_029531.2| Mus musculus zinc finger protein 60 (Zfp60), tr... 40 9.6
38gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, comp... 40 9.6
39gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, comp... 40 9.6
40gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome... 40 9.6
41gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosom... 40 9.6
42gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosom... 40 9.6
43gb|AC121919.3| Mus musculus BAC clone RP24-195I15 from chromosom... 40 9.6
44gb|AC146123.2| Pan troglodytes BAC clone RP43-38F11 from 7, comp... 40 9.6
45gb|AC008163.2| Homo sapiens BAC clone RP11-5B9 from 7, complete ... 40 9.6
46emb|CR684362.2|CNS0FR06 Tetraodon nigroviridis full-length cDNA 40 9.6
47emb|CR680666.2|CNS0FO5I Tetraodon nigroviridis full-length cDNA 40 9.6
48emb|CR656466.2|CNS0F5I0 Tetraodon nigroviridis full-length cDNA 40 9.6
49gb|AC074230.31| Mus musculus strain 129/Sv clone ct7-596k8b map ... 40 9.6
50gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's ... 40 9.6
51gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mR... 40 9.6
52gb|BC071960.1| Homo sapiens coiled-coil domain containing 71, mR... 40 9.6
53gb|BC031754.1| Mus musculus zinc finger protein 60, transcript v... 40 9.6
54emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chr... 40 9.6
55emb|AL390844.12| Human DNA sequence from clone RP11-255N24 on ch... 40 9.6
56gb|U56248.1|CBRG01D9 Caenorhabditis briggsae cosmid G01D9 40 9.6
57emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 40 9.6
58gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, com... 40 9.6
59gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Canc... 40 9.6
60gb|BC079900.1| Mus musculus RIKEN cDNA 2610039C10 gene, mRNA (cD... 40 9.6
61emb|AJ632307.1| Cotesia congregata virus complete genome, segmen... 40 9.6
62gb|AC160139.2| Mus musculus BAC clone RP23-93P8 from chromosome ... 40 9.6
63gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosom... 40 9.6
64emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in ... 40 9.6
65emb|BX927397.10| Zebrafish DNA sequence from clone DKEY-87H7 in ... 40 9.6
66emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in... 40 9.6
67emb|CR617305.1| full-length cDNA clone CS0DC015YD15 of Neuroblas... 40 9.6
68emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta ... 40 9.6
69emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (... 40 9.6
70emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (... 40 9.6
71dbj|AK023691.1| Homo sapiens cDNA FLJ13629 fis, clone PLACE10110... 40 9.6
72dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP20020... 40 9.6
73emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 i... 40 9.6
74gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cance... 40 9.6
75gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromoso... 40 9.6
76dbj|AK149305.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 9.6
77dbj|AK163310.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 9.6
78gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, co... 40 9.6
79ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (... 40 9.6
80dbj|AK014084.1| Mus musculus 13 days embryo head cDNA, RIKEN ful... 40 9.6
81emb|CR391700.1| Gallus gallus finished cDNA, clone ChEST180c17 40 9.6
82gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosom... 40 9.6
83gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosom... 40 9.6
84gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, comp... 40 9.6
85dbj|AK028717.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 9.6
86dbj|AK012762.2| Mus musculus 10, 11 days embryo whole body cDNA,... 40 9.6
87dbj|AK012533.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 9.6
88ref|NM_009560.2| Mus musculus zinc finger protein 60 (Zfp60), tr... 40 9.6
89dbj|AK011719.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 9.6
90gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, com... 40 9.6
91gb|AC160249.6| Mus musculus 10 BAC RP24-363B22 (Roswell Park Can... 40 9.6
92dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
93gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosom... 40 9.6
94gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome... 40 9.6
95gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 9.6
96emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chrom... 40 9.6
97dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958 40 9.6
98gb|AC156940.1| Mus musculus BAC clone RP23-42F24 from 9, complet... 40 9.6
99emb|CR384075.9| Zebrafish DNA sequence from clone DKEY-231E3 in ... 40 9.6
100gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosom... 40 9.6
101gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
102ref|NM_025642.1| Mus musculus RIKEN cDNA 2610039C10 gene (261003... 40 9.6
103gb|AC127370.3| Mus musculus BAC clone RP23-26H6 from 9, complete... 40 9.6
104emb|AL928959.9| Mouse DNA sequence from clone RP23-73I19 on chro... 40 9.6
105gb|U48721.1|MMU48721 Mus musculus zinc finger protein 60 (ZFP60)... 40 9.6
106gb|AC136457.3| Mus musculus BAC clone RP23-76G19 from chromosome... 40 9.6
107gb|AC152981.2| Mus musculus 10 BAC RP23-154M15 (Roswell Park Can... 40 9.6
108gb|AC169519.4| Mus musculus chromosome 5, clone wi1-2285D16, com... 40 9.6
109gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, com... 40 9.6
110gb|AC153953.2| Mus musculus 10 BAC RP24-394B11 (Roswell Park Can... 40 9.6
111emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chro... 40 9.6
112emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on ch... 40 9.6 
>ref|XM_476668.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1435

 Score =  129 bits (65), Expect = 1e-26
 Identities = 180/215 (83%), Gaps = 5/215 (2%)
 Strand = Plus / Minus

                                                                       
Query: 484 aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 543
           ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 985 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 929

                                                                       
Query: 544 aaaagctgctggccaggtccctctaatgcaggggccctcagtgccctgaacacggccttt 603
           |  | ||||||  |||||||||| || || ||||   || | |||||||||   ||| ||
Sbjct: 928 atgaactgctgcgcaggtccctcgaaagctggggta-tctgggccctgaaccttgccctt 870

                                                                       
Query: 604 ctttgactttgttcgcactcctagcaggcgcaagacaaaatctcgcaagctcaccgtaaa 663
           ||||||||||||||| | ||||| || |||||||||||| ||| ||||| || || ||||
Sbjct: 869 ctttgactttgttcggattcctaacatgcgcaagacaaa-tctggcaagttcgccataaa 811

                                              
Query: 664 gcatcccagaccgatcaaaaagctgcaacatagct 698
           ||||||||||||||||||| |||||||||||||||
Sbjct: 810 gcatcccagaccgatcaaagagctgcaacatagct 776
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>dbj|AK065458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D18, full
           insert sequence
          Length = 1435

 Score =  129 bits (65), Expect = 1e-26
 Identities = 180/215 (83%), Gaps = 5/215 (2%)
 Strand = Plus / Minus

                                                                       
Query: 484 aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 543
           ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 985 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 929

                                                                       
Query: 544 aaaagctgctggccaggtccctctaatgcaggggccctcagtgccctgaacacggccttt 603
           |  | ||||||  |||||||||| || || ||||   || | |||||||||   ||| ||
Sbjct: 928 atgaactgctgcgcaggtccctcgaaagctggggta-tctgggccctgaaccttgccctt 870

                                                                       
Query: 604 ctttgactttgttcgcactcctagcaggcgcaagacaaaatctcgcaagctcaccgtaaa 663
           ||||||||||||||| | ||||| || |||||||||||| ||| ||||| || || ||||
Sbjct: 869 ctttgactttgttcggattcctaacatgcgcaagacaaa-tctggcaagttcgccataaa 811

                                              
Query: 664 gcatcccagaccgatcaaaaagctgcaacatagct 698
           ||||||||||||||||||| |||||||||||||||
Sbjct: 810 gcatcccagaccgatcaaagagctgcaacatagct 776
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 1e-20
 Identities = 170/205 (82%), Gaps = 5/205 (2%)
 Strand = Plus / Minus

                                                                           
Query: 484     aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 543
               ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 2828985 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 2828929

                                                                           
Query: 544     aaaagctgctggccaggtccctctaatgcaggggccctcagtgccctgaacacggccttt 603
               |  | ||||||  |||||||||| || || ||||   || | |||||||||   ||| ||
Sbjct: 2828928 atgaactgctgcgcaggtccctcgaaagctggggta-tctgggccctgaaccttgccctt 2828870

                                                                           
Query: 604     ctttgactttgttcgcactcctagcaggcgcaagacaaaatctcgcaagctcaccgtaaa 663
               ||||||||||||||| | ||||| || |||||||||||| ||| ||||| || || ||||
Sbjct: 2828869 ctttgactttgttcggattcctaacatgcgcaagacaaa-tctggcaagttcgccataaa 2828811

                                        
Query: 664     gcatcccagaccgatcaaaaagctg 688
               ||||||||||||||||||| |||||
Sbjct: 2828810 gcatcccagaccgatcaaagagctg 2828786
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score =  109 bits (55), Expect = 1e-20
 Identities = 170/205 (82%), Gaps = 5/205 (2%)
 Strand = Plus / Minus

                                                                          
Query: 484    aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 543
              ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 132546 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 132490

                                                                          
Query: 544    aaaagctgctggccaggtccctctaatgcaggggccctcagtgccctgaacacggccttt 603
              |  | ||||||  |||||||||| || || ||||   || | |||||||||   ||| ||
Sbjct: 132489 atgaactgctgcgcaggtccctcgaaagctggggta-tctgggccctgaaccttgccctt 132431

                                                                          
Query: 604    ctttgactttgttcgcactcctagcaggcgcaagacaaaatctcgcaagctcaccgtaaa 663
              ||||||||||||||| | ||||| || |||||||||||| ||| ||||| || || ||||
Sbjct: 132430 ctttgactttgttcggattcctaacatgcgcaagacaaa-tctggcaagttcgccataaa 132372

                                       
Query: 664    gcatcccagaccgatcaaaaagctg 688
              ||||||||||||||||||| |||||
Sbjct: 132371 gcatcccagaccgatcaaagagctg 132347
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>gb|BT017370.1| Zea mays clone EL01N0324H05.c mRNA sequence
          Length = 1450

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 641 aaatctcgcaagctcaccgtaaagcatcccagaccgatca 680
           |||||| ||||||||||| |||||||| |||| |||||||
Sbjct: 905 aaatcttgcaagctcaccataaagcattccagcccgatca 866
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>gb|AY108942.1| Zea mays PCO138129 mRNA sequence
          Length = 1086

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 641 aaatctcgcaagctcaccgtaaagcatcccagaccgatca 680
           |||||| ||||||||||| |||||||| |||| |||||||
Sbjct: 571 aaatcttgcaagctcaccataaagcattccagcccgatca 532
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>gb|DQ317318.1| Musa acuminata putative glycine-rich protein (GRP1) mRNA, partial
           cds
          Length = 658

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 641 aaatctcgcaagctcaccgtaaagcatcccagaccgatcaaaaagctg 688
           |||||| ||||||||||| || ||||| || || ||||||||||||||
Sbjct: 571 aaatcttgcaagctcaccatatagcattcccgaacgatcaaaaagctg 524
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>gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complete sequence
          Length = 195372

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 224    catacatacaaacaacaaaaata 246
              |||||||||||||||||||||||
Sbjct: 153427 catacatacaaacaacaaaaata 153449
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>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence
          Length = 256751

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 224   catacatacaaacaacaaaaata 246
             |||||||||||||||||||||||
Sbjct: 15816 catacatacaaacaacaaaaata 15794
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>gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome 1, complete sequence
          Length = 223534

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 224    catacatacaaacaacaaaaata 246
              |||||||||||||||||||||||
Sbjct: 185786 catacatacaaacaacaaaaata 185764
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>gb|AC100561.13| Mus musculus chromosome 1, clone RP23-154C4, complete sequence
          Length = 207939

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 224    catacatacaaacaacaaaaata 246
              |||||||||||||||||||||||
Sbjct: 171746 catacatacaaacaacaaaaata 171724
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>gb|AC163216.10| Mus musculus chromosome 1, clone RP23-69G5, complete sequence
          Length = 260188

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 224    catacatacaaacaacaaaaata 246
              |||||||||||||||||||||||
Sbjct: 253992 catacatacaaacaacaaaaata 253970
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>emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chromosome X, complete
             sequence
          Length = 148507

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 221   ccacatacatacaaacaacaaaa 243
             |||||||||||||||||||||||
Sbjct: 16481 ccacatacatacaaacaacaaaa 16459
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>emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chromosome 17, complete
              sequence
          Length = 221525

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 224    catacatacaaacaacaaaaat 245
              ||||||||||||||||||||||
Sbjct: 165889 catacatacaaacaacaaaaat 165868
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>gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, complete sequence
          Length = 196566

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 224   catacatacaaacaacaaaaat 245
             ||||||||||||||||||||||
Sbjct: 90702 catacatacaaacaacaaaaat 90681
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>emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in linkage group 7, complete
              sequence
          Length = 210545

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 154    aacaaatagggaacacaatacatttt 179
              ||||||||| ||||||||||||||||
Sbjct: 136091 aacaaatagtgaacacaatacatttt 136066
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>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence
          Length = 172348

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 221    ccacatacatacaaacaacaaaaat 245
              ||||||||||||||| |||||||||
Sbjct: 166660 ccacatacatacaaataacaaaaat 166684
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>gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, complete sequence
          Length = 227319

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 221    ccacatacatacaaacaacaaaaat 245
              ||||||||||||||| |||||||||
Sbjct: 102136 ccacatacatacaaataacaaaaat 102160
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>gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosome 17, complete sequence
          Length = 197522

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 225    atacatacaaacaacaaaaat 245
              |||||||||||||||||||||
Sbjct: 124292 atacatacaaacaacaaaaat 124312
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>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete
             sequence
          Length = 173054

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 225   atacatacaaacaacaaaaat 245
             |||||||||||||||||||||
Sbjct: 48012 atacatacaaacaacaaaaat 47992
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>gb|AC117214.3| Mus musculus BAC clone RP23-307B15 from chromosome 9, complete sequence
          Length = 219833

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 521    tgttgttggcttttggtgtct 541
              |||||||||||||||||||||
Sbjct: 148813 tgttgttggcttttggtgtct 148793
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>gb|AC109364.6| Mus musculus BAC clone RP23-127N24 from chromosome 17, complete sequence
          Length = 198838

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 225    atacatacaaacaacaaaaat 245
              |||||||||||||||||||||
Sbjct: 196341 atacatacaaacaacaaaaat 196321
to top
>gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, complete sequence
          Length = 214461

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 223    acatacatacaaacaacaaaa 243
              |||||||||||||||||||||
Sbjct: 112998 acatacatacaaacaacaaaa 112978
to top
>gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete sequence
          Length = 127836

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   ctccgttcttttcaagataac 201
             |||||||||||||||||||||
Sbjct: 79918 ctccgttcttttcaagataac 79898
to top
>emb|AL606661.23| Mouse DNA sequence from clone RP23-355P23 on chromosome 11 Contains a
            ubiquitin C (Ubc) pseudogene, complete sequence
          Length = 91585

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  atacatacaaacaacaaaaat 245
            |||||||||||||||||||||
Sbjct: 4073 atacatacaaacaacaaaaat 4093
to top
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 18      ataatacatctgcttcagtta 38
               |||||||||||||||||||||
Sbjct: 2065503 ataatacatctgcttcagtta 2065523
to top
>gb|AC154306.3| Mus musculus BAC clone RP23-376G3 from 17, complete sequence
          Length = 139522

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 221   ccacatacatacaaacaacaaaaat 245
             ||||| |||||||||||||||||||
Sbjct: 29530 ccacaaacatacaaacaacaaaaat 29506
to top
>emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chromosome 4, complete
              sequence
          Length = 114436

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 223    acatacatacaaacaacaaaaatac 247
              ||||||||||| |||||||||||||
Sbjct: 101214 acatacatacatacaacaaaaatac 101238
to top
>emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chromosome X, complete
             sequence
          Length = 169053

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   atacatacaaacaacaaaaat 245
             |||||||||||||||||||||
Sbjct: 22721 atacatacaaacaacaaaaat 22741
to top
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence
          Length = 177167

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 220   tccacatacatacaaacaacaaaa 243
             |||| |||||||||||||||||||
Sbjct: 33487 tccatatacatacaaacaacaaaa 33464
to top
>ref|XM_516456.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ12800
            (LOC460366), mRNA
          Length = 1460

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1212 cttagtttccccaaacattg 1193
to top
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    attaagccatgaaaatcagaaaga 328
              |||||||||||| |||||||||||
Sbjct: 144965 attaagccatgagaatcagaaaga 144942
to top
>gb|AC122773.8| Mus musculus chromosome 1, clone RP24-160N7, complete sequence
          Length = 142124

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 221    ccacatacatacaaacaacaaaaa 244
              ||||||||| ||||||||||||||
Sbjct: 100791 ccacatacacacaaacaacaaaaa 100768
to top
>gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, complete sequence
          Length = 130269

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 221    ccacatacatacaaacaacaaaaa 244
              ||||||||| ||||||||||||||
Sbjct: 127501 ccacatacacacaaacaacaaaaa 127524
to top
>ref|XM_581684.2| PREDICTED: Bos taurus hypothetical LOC538638 (LOC538638), mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  gaacacaatacattttgctc 183
            ||||||||||||||||||||
Sbjct: 1010 gaacacaatacattttgctc 991
to top
>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence
          Length = 213736

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    atacatacaaacaacaaaaa 244
              ||||||||||||||||||||
Sbjct: 163338 atacatacaaacaacaaaaa 163357
to top
>ref|NM_029531.2| Mus musculus zinc finger protein 60 (Zfp60), transcript variant 2,
            mRNA
          Length = 3863

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 2210 accttcagttgaaaatcaaa 2229
to top
>gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, complete sequence
          Length = 211785

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    atacatacaaacaacaaaaa 244
              ||||||||||||||||||||
Sbjct: 155960 atacatacaaacaacaaaaa 155979
to top
>gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, complete sequence
          Length = 206573

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    accttcagttgaaaatcaaa 151
              ||||||||||||||||||||
Sbjct: 113636 accttcagttgaaaatcaaa 113655
to top
>gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome 16, complete sequence
          Length = 172980

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   acatacatacaaacaacaaa 242
             ||||||||||||||||||||
Sbjct: 84331 acatacatacaaacaacaaa 84312
to top
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 218   cctccacatacatacaaacaacaaaaat 245
             |||||||||||| ||||||| |||||||
Sbjct: 23209 cctccacatacacacaaacagcaaaaat 23182
to top
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence
          Length = 181083

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   gttgttggcttttggtgtct 541
             ||||||||||||||||||||
Sbjct: 27150 gttgttggcttttggtgtct 27131
to top
>gb|AC121919.3| Mus musculus BAC clone RP24-195I15 from chromosome 14, complete
             sequence
          Length = 146974

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   atacatacaaacaacaaaaa 244
             ||||||||||||||||||||
Sbjct: 31906 atacatacaaacaacaaaaa 31925
to top
>gb|AC146123.2| Pan troglodytes BAC clone RP43-38F11 from 7, complete sequence
          Length = 185971

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    ccatgagttgttgttggctt 532
              ||||||||||||||||||||
Sbjct: 101425 ccatgagttgttgttggctt 101406
to top
>gb|AC008163.2| Homo sapiens BAC clone RP11-5B9 from 7, complete sequence
          Length = 135300

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   ccatgagttgttgttggctt 532
             ||||||||||||||||||||
Sbjct: 27616 ccatgagttgttgttggctt 27597
to top
>emb|CR684362.2|CNS0FR06 Tetraodon nigroviridis full-length cDNA
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 ccagcaaagcaaactggcca 286
           ||||||||||||||||||||
Sbjct: 659 ccagcaaagcaaactggcca 678
to top
>emb|CR680666.2|CNS0FO5I Tetraodon nigroviridis full-length cDNA
          Length = 1178

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 ccagcaaagcaaactggcca 286
           ||||||||||||||||||||
Sbjct: 670 ccagcaaagcaaactggcca 689
to top
>emb|CR656466.2|CNS0F5I0 Tetraodon nigroviridis full-length cDNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 ccagcaaagcaaactggcca 286
           ||||||||||||||||||||
Sbjct: 605 ccagcaaagcaaactggcca 624
to top
>gb|AC074230.31| Mus musculus strain 129/Sv clone ct7-596k8b map 7, complete sequence
          Length = 91251

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 6800 accttcagttgaaaatcaaa 6819
to top
>gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 186074

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 221    ccacatacatacaaacaacaaaaa 244
              ||||||||| ||||||||||||||
Sbjct: 179120 ccacatacacacaaacaacaaaaa 179097
to top
>gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
            MGC:34190 IMAGE:5229681), complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1544 cttagtttccccaaacattg 1525
to top
>gb|BC071960.1| Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
           IMAGE:6598747), partial cds
          Length = 988

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 491 cttagtttccccaaacattg 510
           ||||||||||||||||||||
Sbjct: 734 cttagtttccccaaacattg 715
to top
>gb|BC031754.1| Mus musculus zinc finger protein 60, transcript variant 2, mRNA (cDNA
            clone MGC:18742 IMAGE:3992720), complete cds
          Length = 2676

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 2209 accttcagttgaaaatcaaa 2228
to top
>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an
             ADP-ribosylation factor pseudogene, complete sequence
          Length = 178914

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tttcaagataacaggtacta 209
             ||||||||||||||||||||
Sbjct: 36380 tttcaagataacaggtacta 36399
to top
>emb|AL390844.12| Human DNA sequence from clone RP11-255N24 on chromosome 9p13.3-21.3
              Contains a CMT1A duplicated region transcript 15 (CDRT15)
              pseudogene, a pseudogene similar to part of solute carrier
              family 4 (anion exchanger), member 1, adaptor protein
              (SLC4A1AP), a novel pseudogene and a RNA binding motif
              protein, X chromosome (RBMX) (HNRPG) pseudogene, complete
              sequence
          Length = 163677

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    agttgaaaatcaaactaacaaata 161
              |||||||||||||| |||||||||
Sbjct: 110035 agttgaaaatcaaaataacaaata 110012
to top
>gb|U56248.1|CBRG01D9 Caenorhabditis briggsae cosmid G01D9
          Length = 40031

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  tgaaaatcagaaagagcagc 333
            ||||||||||||||||||||
Sbjct: 9568 tgaaaatcagaaagagcagc 9549
to top
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3
          Length = 349751

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 189    ttttcaagataacaggtactattattta 216
              ||||||| |||||||||||||| |||||
Sbjct: 152249 ttttcaatataacaggtactataattta 152222
to top
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence
          Length = 197397

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   acatacaaacaacaaaaata 246
             ||||||||||||||||||||
Sbjct: 13734 acatacaaacaacaaaaata 13715
to top
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214578

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cctccacatacatacaaaca 237
             ||||||||||||||||||||
Sbjct: 99698 cctccacatacatacaaaca 99679
to top
>gb|BC079900.1| Mus musculus RIKEN cDNA 2610039C10 gene, mRNA (cDNA clone
           MGC:100039 IMAGE:30602551), complete cds
          Length = 1397

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 acatacatacaaacaacaaa 242
           ||||||||||||||||||||
Sbjct: 927 acatacatacaaacaacaaa 908
to top
>emb|AJ632307.1| Cotesia congregata virus complete genome, segment Circle4
          Length = 15876

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  caacaaaaatacttcaataa 255
            ||||||||||||||||||||
Sbjct: 7863 caacaaaaatacttcaataa 7844
to top
>gb|AC160139.2| Mus musculus BAC clone RP23-93P8 from chromosome 9, complete sequence
          Length = 208009

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   acatacatacaaacaacaaaaata 246
             ||||||||||| ||||||||||||
Sbjct: 67973 acatacatacatacaacaaaaata 67950
to top
>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence
          Length = 236367

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    gctttggcaatctttccttt 440
              ||||||||||||||||||||
Sbjct: 153433 gctttggcaatctttccttt 153414
to top
>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23,
             complete sequence
          Length = 167014

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   aaacaacaaaaatacttcaa 252
             ||||||||||||||||||||
Sbjct: 46160 aaacaacaaaaatacttcaa 46179
to top
>emb|BX927397.10| Zebrafish DNA sequence from clone DKEY-87H7 in linkage group 7,
            complete sequence
          Length = 187890

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 149  aaactaacaaatagggaacacaatacattttg 180
            |||| ||||||||  |||||||||||||||||
Sbjct: 6978 aaaccaacaaatattgaacacaatacattttg 6947
to top
>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25,
              complete sequence
          Length = 181165

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 665    catcccagaccgatcaaaaagctg 688
              ||||||||| ||||||||||||||
Sbjct: 152503 catcccagatcgatcaaaaagctg 152480
to top
>emb|CR617305.1| full-length cDNA clone CS0DC015YD15 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1462

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1271 cttagtttccccaaacattg 1252
to top
>emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1743

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1535 cttagtttccccaaacattg 1516
to top
>emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1761

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1553 cttagtttccccaaacattg 1534
to top
>emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (Jurkat cell line) Cot
            10-normalized of Homo sapiens (human)
          Length = 1718

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1525 cttagtttccccaaacattg 1506
to top
>dbj|AK023691.1| Homo sapiens cDNA FLJ13629 fis, clone PLACE1011056, weakly similar
           to HISTONE H1, GONADAL
          Length = 2511

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 491 cttagtttccccaaacattg 510
           ||||||||||||||||||||
Sbjct: 830 cttagtttccccaaacattg 811
to top
>dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar to
            HISTONE H1, GONADAL
          Length = 1782

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1546 cttagtttccccaaacattg 1527
to top
>emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 in linkage group 23,
             complete sequence
          Length = 156938

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 149   aaactaacaaatagggaacacaatacattttg 180
             |||| ||||||||  |||||||||||||||||
Sbjct: 17794 aaaccaacaaatattgaacacaatacattttg 17825
to top
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 250218

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cctccacatacatacaaaca 237
             ||||||||||||||||||||
Sbjct: 28353 cctccacatacatacaaaca 28334
to top
>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete
             sequence
          Length = 208903

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   gctttggcaatctttccttt 440
             ||||||||||||||||||||
Sbjct: 29729 gctttggcaatctttccttt 29710
to top
>dbj|AK149305.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930017G15 product:zinc finger protein 60, full
            insert sequence
          Length = 3882

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 2231 accttcagttgaaaatcaaa 2250
to top
>dbj|AK163310.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020013B09 product:hypothetical protein, full
           insert sequence
          Length = 1326

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 acatacatacaaacaacaaa 242
           ||||||||||||||||||||
Sbjct: 949 acatacatacaaacaacaaa 930
to top
>gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, complete sequence
          Length = 215786

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 542    caaaaagctgctggccaggt 561
              ||||||||||||||||||||
Sbjct: 132943 caaaaagctgctggccaggt 132962
to top
>ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (CCDC71), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1544 cttagtttccccaaacattg 1525
to top
>dbj|AK014084.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3110025H23 product:hypothetical protein,
           full insert sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 acatacatacaaacaacaaa 242
           ||||||||||||||||||||
Sbjct: 885 acatacatacaaacaacaaa 866
to top
>emb|CR391700.1| Gallus gallus finished cDNA, clone ChEST180c17
          Length = 835

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 gctttggcaatctttccttt 440
           ||||||||||||||||||||
Sbjct: 678 gctttggcaatctttccttt 697
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>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete sequence
          Length = 190127

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    acatacatacaaacaacaaa 242
              ||||||||||||||||||||
Sbjct: 176930 acatacatacaaacaacaaa 176949
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>gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosome 13, complete
             sequence
          Length = 201777

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   atacatacaaacaacaaaaa 244
             ||||||||||||||||||||
Sbjct: 22500 atacatacaaacaacaaaaa 22519
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>gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, complete sequence
          Length = 174363

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   cttagtttccccaaacattg 510
             ||||||||||||||||||||
Sbjct: 93073 cttagtttccccaaacattg 93092
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>dbj|AK028717.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732443L19 product:zinc finger protein 60,
            full insert sequence
          Length = 2729

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 2304 accttcagttgaaaatcaaa 2323
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>dbj|AK012762.2| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810018N07 product:RIKEN cDNA
            2610039C10 gene, full insert sequence
          Length = 2609

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  acatacatacaaacaacaaa 242
            ||||||||||||||||||||
Sbjct: 2225 acatacatacaaacaacaaa 2206
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>dbj|AK012533.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700078I24 product:RIKEN cDNA
           2610039C10 gene, full insert sequence
          Length = 1301

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 acatacatacaaacaacaaa 242
           ||||||||||||||||||||
Sbjct: 916 acatacatacaaacaacaaa 897
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>ref|NM_009560.2| Mus musculus zinc finger protein 60 (Zfp60), transcript variant 1,
            mRNA
          Length = 4057

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 2404 accttcagttgaaaatcaaa 2423
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>dbj|AK011719.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610039C10 product:RIKEN cDNA
           2610039C10 gene, full insert sequence
          Length = 1138

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 acatacatacaaacaacaaa 242
           ||||||||||||||||||||
Sbjct: 765 acatacatacaaacaacaaa 746
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>gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, complete sequence
          Length = 152733

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   acatacaaacaacaaaaata 246
             ||||||||||||||||||||
Sbjct: 26701 acatacaaacaacaaaaata 26720
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>gb|AC160249.6| Mus musculus 10 BAC RP24-363B22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 156854

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   acatacatacaaacaacaaaaata 246
             ||||||| ||||||||||||||||
Sbjct: 64241 acatacacacaaacaacaaaaata 64218
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 305      attaagccatgaaaatcagaaaga 328
                |||||||||||| |||||||||||
Sbjct: 28186402 attaagccatgagaatcagaaaga 28186379
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>gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosome 13, complete sequence
          Length = 174991

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    atacatacaaacaacaaaaa 244
              ||||||||||||||||||||
Sbjct: 108665 atacatacaaacaacaaaaa 108646
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>gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome 13, complete sequence
          Length = 157775

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   atacatacaaacaacaaaaa 244
             ||||||||||||||||||||
Sbjct: 96461 atacatacaaacaacaaaaa 96480
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>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete
              sequence
          Length = 223861

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 522    gttgttggcttttggtgtct 541
              ||||||||||||||||||||
Sbjct: 170977 gttgttggcttttggtgtct 170958
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>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
             sequence
          Length = 223392

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   ccacatacatacaaacaacaaaaa 244
             ||||||||| ||||||||||||||
Sbjct: 22122 ccacatacacacaaacaacaaaaa 22145
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>dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958
          Length = 1657

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cttagtttccccaaacattg 510
            ||||||||||||||||||||
Sbjct: 1410 cttagtttccccaaacattg 1391
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>gb|AC156940.1| Mus musculus BAC clone RP23-42F24 from 9, complete sequence
          Length = 157351

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 575    gggccctcagtgccctgaacacggcctt 602
              ||||||||||||||| ||||| ||||||
Sbjct: 105926 gggccctcagtgcccagaacatggcctt 105953
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>emb|CR384075.9| Zebrafish DNA sequence from clone DKEY-231E3 in linkage group 7, complete
              sequence
          Length = 168610

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    cttcattatatcttcaaggc 130
              ||||||||||||||||||||
Sbjct: 157284 cttcattatatcttcaaggc 157303
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>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence
          Length = 190900

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 218    cctccacatacatacaaacaacaaaaat 245
              |||||||||||| ||||||| |||||||
Sbjct: 122345 cctccacatacacacaaacagcaaaaat 122372
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 305      attaagccatgaaaatcagaaaga 328
                |||||||||||| |||||||||||
Sbjct: 28171280 attaagccatgagaatcagaaaga 28171257
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>ref|NM_025642.1| Mus musculus RIKEN cDNA 2610039C10 gene (2610039C10Rik), mRNA
          Length = 1300

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 acatacatacaaacaacaaa 242
           ||||||||||||||||||||
Sbjct: 915 acatacatacaaacaacaaa 896
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>gb|AC127370.3| Mus musculus BAC clone RP23-26H6 from 9, complete sequence
          Length = 224053

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 575    gggccctcagtgccctgaacacggcctt 602
              ||||||||||||||| ||||| ||||||
Sbjct: 187733 gggccctcagtgcccagaacatggcctt 187706
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>emb|AL928959.9| Mouse DNA sequence from clone RP23-73I19 on chromosome 2, complete
             sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   tacatacaaacaacaaaaat 245
             ||||||||||||||||||||
Sbjct: 90024 tacatacaaacaacaaaaat 90005
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>gb|U48721.1|MMU48721 Mus musculus zinc finger protein 60 (ZFP60) gene, complete cds
          Length = 3923

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  accttcagttgaaaatcaaa 151
            ||||||||||||||||||||
Sbjct: 2278 accttcagttgaaaatcaaa 2297
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>gb|AC136457.3| Mus musculus BAC clone RP23-76G19 from chromosome 13, complete sequence
          Length = 204369

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 230   tacaaacaacaaaaatacttcaataaca 257
             |||| ||||||||||||| |||||||||
Sbjct: 17870 tacatacaacaaaaatacctcaataaca 17843
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>gb|AC152981.2| Mus musculus 10 BAC RP23-154M15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 200104

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   agttgaaaatcaaactaacaaata 161
             |||||||||||||| |||||||||
Sbjct: 25016 agttgaaaatcaaagtaacaaata 24993
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>gb|AC169519.4| Mus musculus chromosome 5, clone wi1-2285D16, complete sequence
          Length = 40386

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  ctccacatacatacaaacaa 238
            ||||||||||||||||||||
Sbjct: 2647 ctccacatacatacaaacaa 2666
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>gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, complete sequence
          Length = 140911

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  ctccacatacatacaaacaa 238
            ||||||||||||||||||||
Sbjct: 6481 ctccacatacatacaaacaa 6462
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>gb|AC153953.2| Mus musculus 10 BAC RP24-394B11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163098

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    agttgaaaatcaaactaacaaata 161
              |||||||||||||| |||||||||
Sbjct: 147826 agttgaaaatcaaagtaacaaata 147803
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>emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chromosome X, complete
            sequence
          Length = 111339

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  cacatacatacaaacaacaa 241
            ||||||||||||||||||||
Sbjct: 6380 cacatacatacaaacaacaa 6361
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>emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on chromosome X, complete
             sequence
          Length = 114708

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   cacatacatacaaacaacaa 241
             ||||||||||||||||||||
Sbjct: 75012 cacatacatacaaacaacaa 74993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,245,707
Number of Sequences: 3902068
Number of extensions: 8245707
Number of successful extensions: 151850
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151453
Number of HSP's gapped (non-prelim): 393
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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