ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10l12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 8e-37
2gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 163 8e-37
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 8e-37
4dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 8e-37
5dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 8e-37
6dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 8e-37
7gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA... 123 7e-25
8gb|AY108197.1| Zea mays PCO065133 mRNA sequence 105 2e-19
9ref|XM_476669.1| Oryza sativa (japonica cultivar-group), mRNA 78 4e-11
10ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group... 78 4e-11
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
12dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
13dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
14dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
15dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
16dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
17ref|XM_473942.1| Oryza sativa (japonica cultivar-group), predic... 66 1e-07
18emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 66 1e-07
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
20dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
21dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
22dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
23gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) m... 48 0.032
24gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 44 0.50
25emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 44 0.50
26emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.50
27dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-l... 44 0.50
28gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 44 0.50
29dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.50
30gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.50
31gb|BT016685.1| Zea mays clone Contig518 mRNA sequence 42 2.0
32gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete seq... 42 2.0
33gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 2.0
34emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthe... 42 2.0
35gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
36ref|XM_368909.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 7.8
37gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH... 40 7.8
38gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
39emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.8
40emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clon... 40 7.8
41dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.8
42gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 7.8
43gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.8
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
46gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 7.8
47dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
48gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 7.8
49gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 7.8
50gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.8
51gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
52gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
53emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 8e-37
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                            
Query: 417      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32328144 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32328085

                                                                            
Query: 477      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 32328084 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32328025

                                  
Query: 537      cggcctcgccctccgccg 554
                ||||||| ||||||||||
Sbjct: 32328024 cggcctccccctccgccg 32328007
to top
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  163 bits (82), Expect = 8e-37
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                         
Query: 417   cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
             ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 61911 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 61852

                                                                         
Query: 477   cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
             ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 61851 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 61792

                               
Query: 537   cggcctcgccctccgccg 554
             ||||||| ||||||||||
Sbjct: 61791 cggcctccccctccgccg 61774
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 8e-37
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                            
Query: 417      cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
                ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 32418654 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 32418595

                                                                            
Query: 477      cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
                ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 32418594 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 32418535

                                  
Query: 537      cggcctcgccctccgccg 554
                ||||||| ||||||||||
Sbjct: 32418534 cggcctccccctccgccg 32418517
to top
>dbj|AK120304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N09, full
            insert sequence
          Length = 1526

 Score =  163 bits (82), Expect = 8e-37
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                        
Query: 417  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1162 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1103

                                                                        
Query: 477  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1102 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1043

                              
Query: 537  cggcctcgccctccgccg 554
            ||||||| ||||||||||
Sbjct: 1042 cggcctccccctccgccg 1025
to top
>dbj|AK098878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E15, full
            insert sequence
          Length = 1522

 Score =  163 bits (82), Expect = 8e-37
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                        
Query: 417  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1158 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1099

                                                                        
Query: 477  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1098 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1039

                              
Query: 537  cggcctcgccctccgccg 554
            ||||||| ||||||||||
Sbjct: 1038 cggcctccccctccgccg 1021
to top
>dbj|AK061719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H12, full
            insert sequence
          Length = 1586

 Score =  163 bits (82), Expect = 8e-37
 Identities = 124/138 (89%)
 Strand = Plus / Minus

                                                                        
Query: 417  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
            ||||||||||| | |||||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1222 cgaggcggtcggcgtcggtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1163

                                                                        
Query: 477  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
            ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 1162 cgctgagcgccatggtgagctcgaactcctcccgcatcatccgcagcacgttcctcaccc 1103

                              
Query: 537  cggcctcgccctccgccg 554
            ||||||| ||||||||||
Sbjct: 1102 cggcctccccctccgccg 1085
to top
>gb|AF022740.1|AF022740 Oryza sativa glycolate oxidase (GOX) mRNA, complete cds
          Length = 1473

 Score =  123 bits (62), Expect = 7e-25
 Identities = 119/138 (86%)
 Strand = Plus / Minus

                                                                        
Query: 417  cgaggcggtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacc 476
            ||||||| ||| | || ||| |||||||  ||||||||||||||  ||||  |||||| |
Sbjct: 1128 cgaggcgttcggcgtccgtgtagatgtgggcgcgggtgatgtcggcgagcgaggtgcatc 1069

                                                                        
Query: 477  cgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgc 536
            ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 1068 cgctgaacgccatggtgagctcgaactcctcccgcatcatccgcagcaggttcctcaccc 1009

                              
Query: 537  cggcctcgccctccgccg 554
            ||||||  ||||||||||
Sbjct: 1008 cggccttcccctccgccg 991
to top
>gb|AY108197.1| Zea mays PCO065133 mRNA sequence
          Length = 1667

 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                        
Query: 430  ctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgagcgccat 489
            |||||||| |||||| | ||||||||| |||  |||   |||||| |||| |||||||||
Sbjct: 1288 ctcggtgatgatgtgcttgcgggtgatttcggcgagggaggtgcagccgctgagcgccat 1229

                                                                        
Query: 490  ggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctcgccctc 549
            ||||||||||||||| ||||||| ||||||||| |||||   |||||||||||||||| |
Sbjct: 1228 ggtgagctcgaactcgtcccgcagcatgcgcaggacgttggacacgccggcctcgcccgc 1169

                 
Query: 550  cgccg 554
            |||||
Sbjct: 1168 cgccg 1164
to top
>ref|XM_476669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1439

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                        
Query: 484  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027

                       
Query: 544  gccctccgccg 554
             ||| ||||||
Sbjct: 1026 ccccgccgccg 1016



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 550 cgccgtggttggacacgatgatgcc 574
           |||||||||||||||||||||||||
Sbjct: 835 cgccgtggttggacacgatgatgcc 811
to top
>ref|XM_506164.1| PREDICTED Oryza sativa (japonica cultivar-group), B1364A02.11-1 mRNA
          Length = 1501

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                        
Query: 484  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068

                       
Query: 544  gccctccgccg 554
             ||| ||||||
Sbjct: 1067 ccccgccgccg 1057



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 550 cgccgtggttggacacgatgatgcc 574
           |||||||||||||||||||||||||
Sbjct: 876 cgccgtggttggacacgatgatgcc 852
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                           
Query: 424     gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
               |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 2833181 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 2833122

                                                                           
Query: 484     cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
               ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 2833121 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 2833062

                          
Query: 544     gccctccgccg 554
                ||| ||||||
Sbjct: 2833061 ccccgccgccg 2833051



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 550     cgccgtggttggacacgatgatgcc 574
               |||||||||||||||||||||||||
Sbjct: 2832695 cgccgtggttggacacgatgatgcc 2832671
to top
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                          
Query: 424    gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
              |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 136742 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 136683

                                                                          
Query: 484    cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
              ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 136682 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 136623

                         
Query: 544    gccctccgccg 554
               ||| ||||||
Sbjct: 136622 ccccgccgccg 136612



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 550    cgccgtggttggacacgatgatgcc 574
              |||||||||||||||||||||||||
Sbjct: 136256 cgccgtggttggacacgatgatgcc 136232
to top
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0050B07
          Length = 142134

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 3468 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 3409

                                                                        
Query: 484  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 3408 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 3349

                       
Query: 544  gccctccgccg 554
             ||| ||||||
Sbjct: 3348 ccccgccgccg 3338



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 550  cgccgtggttggacacgatgatgcc 574
            |||||||||||||||||||||||||
Sbjct: 2982 cgccgtggttggacacgatgatgcc 2958
to top
>dbj|AK120929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A14, full
            insert sequence
          Length = 1738

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1445 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1386

                                                                        
Query: 484  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1385 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1326

                       
Query: 544  gccctccgccg 554
             ||| ||||||
Sbjct: 1325 ccccgccgccg 1315



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 550  cgccgtggttggacacgatgatgcc 574
            |||||||||||||||||||||||||
Sbjct: 1134 cgccgtggttggacacgatgatgcc 1110
to top
>dbj|AK103933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E11, full
            insert sequence
          Length = 1439

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1146 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1087

                                                                        
Query: 484  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1086 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1027

                       
Query: 544  gccctccgccg 554
             ||| ||||||
Sbjct: 1026 ccccgccgccg 1016



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 550 cgccgtggttggacacgatgatgcc 574
           |||||||||||||||||||||||||
Sbjct: 835 cgccgtggttggacacgatgatgcc 811
to top
>dbj|AK062189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E08, full
            insert sequence
          Length = 1501

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gtcgccctcggtgaagatgtgttcgcgggtgatgtcgctgagcttggtgcacccgccgag 483
            |||| ||||||||| || ||| | |||||||||||||  |||   |||||| |||| |||
Sbjct: 1187 gtcggcctcggtgatgacgtggttgcgggtgatgtcggcgagggaggtgcagccgctgag 1128

                                                                        
Query: 484  cgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctc 543
            ||||||||||||||||||||| || || | |||  ||||||||||||  || ||||||||
Sbjct: 1127 cgccatggtgagctcgaactcgtcgcggagcatctgcagcacgttccggactccggcctc 1068

                       
Query: 544  gccctccgccg 554
             ||| ||||||
Sbjct: 1067 ccccgccgccg 1057



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 550 cgccgtggttggacacgatgatgcc 574
           |||||||||||||||||||||||||
Sbjct: 876 cgccgtggttggacacgatgatgcc 852
to top
>ref|XM_473942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 470  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1034 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 975

                             
Query: 530  ctcacgccggcctcgcc 546
            |||||||||||||||||
Sbjct: 974  ctcacgccggcctcgcc 958
to top
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 470   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
             ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 63428 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 63369

                              
Query: 530   ctcacgccggcctcgcc 546
             |||||||||||||||||
Sbjct: 63368 ctcacgccggcctcgcc 63352



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 470   gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
             ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 59360 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 59301

                              
Query: 530   ctcacgccggcctcgcc 546
             |||||||||||||||||
Sbjct: 59300 ctcacgccggcctcgcc 59284
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 470      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
                ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 31730158 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 31730099

                                 
Query: 530      ctcacgccggcctcgcc 546
                |||||||||||||||||
Sbjct: 31730098 ctcacgccggcctcgcc 31730082



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 470      gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
                ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 31726090 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 31726031

                                 
Query: 530      ctcacgccggcctcgcc 546
                |||||||||||||||||
Sbjct: 31726030 ctcacgccggcctcgcc 31726014
to top
>dbj|AK068638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O03, full
            insert sequence
          Length = 1435

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 470  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1103 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1044

                             
Query: 530  ctcacgccggcctcgcc 546
            |||||||||||||||||
Sbjct: 1043 ctcacgccggcctcgcc 1027
to top
>dbj|AK068129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131A08, full
            insert sequence
          Length = 1986

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 470  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
            ||||| |||| |||||||||||||| ||| | ||| || | || ||| |||||| |||||
Sbjct: 1621 gtgcagccgctgagcgccatggtgatctccagctcgtctctcagcatccgcagcgcgttc 1562

                             
Query: 530  ctcacgccggcctcgcc 546
            |||||||||||||||||
Sbjct: 1561 ctcacgccggcctcgcc 1545
to top
>dbj|AK060221.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F07, full
            insert sequence
          Length = 1427

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 470  gtgcacccgccgagcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttc 529
            ||||| |||| |||||||||||||||||| | ||| || || | |||  ||||||| |||
Sbjct: 1107 gtgcatccgctgagcgccatggtgagctccagctcgtcgcggagcatctgcagcaccttc 1048

                             
Query: 530  ctcacgccggcctcgcc 546
            |||||||||||||||||
Sbjct: 1047 ctcacgccggcctcgcc 1031
to top
>gb|AY173074.1| Zantedeschia aethiopica glycolate oxidase (gox) mRNA, complete cds
          Length = 1486

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcacgccggcctcg 544
            ||||||||||||||||||||||| || | |||  | ||||| |||||||| || ||||| 
Sbjct: 1115 gccatggtgagctcgaactcctcgcggagcatttgaagcaccttcctcacaccagcctca 1056

                    
Query: 545  ccctccgc 552
            || |||||
Sbjct: 1055 ccttccgc 1048
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 549    ccgccgtggttggacacgatgatgcc 574
              |||||||||||||||| |||||||||
Sbjct: 797393 ccgccgtggttggacaggatgatgcc 797368
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 549     ccgccgtggttggacacgatgatgcc 574
               |||||||||||||||| |||||||||
Sbjct: 1988776 ccgccgtggttggacaggatgatgcc 1988801
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 549     ccgccgtggttggacacgatgatgcc 574
               |||||||||||||||| |||||||||
Sbjct: 2117643 ccgccgtggttggacaggatgatgcc 2117618
to top
>dbj|AK157303.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830210F09 product:weakly similar to
            Putative L-lactate dehydrogenase (EC 1.1.2.3) [Bordetella
            parapertussis], full insert sequence
          Length = 7735

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 549  ccgccgtggttggacacgatgatgcc 574
            |||||||||||||| |||||||||||
Sbjct: 7123 ccgccgtggttggagacgatgatgcc 7098
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 549     ccgccgtggttggacacgatgatgcc 574
               |||||||||||||||| |||||||||
Sbjct: 1691979 ccgccgtggttggacaggatgatgcc 1691954
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 407    agcgggcgtccgaggcggtcgc 428
              ||||||||||||||||||||||
Sbjct: 277779 agcgggcgtccgaggcggtcgc 277800



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 401     ctcggcagcgggcgtccgag 420
               ||||||||||||||||||||
Sbjct: 5814716 ctcggcagcgggcgtccgag 5814697
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 549    ccgccgtggttggacacgatgatgcc 574
              |||||||||||||||| |||||||||
Sbjct: 953763 ccgccgtggttggacaggatgatgcc 953788
to top
>gb|BT016685.1| Zea mays clone Contig518 mRNA sequence
          Length = 1395

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 482  agcgccatggtgagctcgaactcctcccgcatcatgcgcagcacgttcctcac 534
            ||||||||||||| ||||| ||| |||| || ||| |||||| | ||||||||
Sbjct: 1079 agcgccatggtgatctcgagctcatccctcagcatccgcagcgcattcctcac 1027
to top
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence
          Length = 138518

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 551    gccgtggttggacacgatgatgccc 575
              |||||||||||||| ||||||||||
Sbjct: 127775 gccgtggttggacatgatgatgccc 127751
to top
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 498     cgaactcctcccgcatcatgcgcag 522
               |||| ||||||||||||||||||||
Sbjct: 2682575 cgaaatcctcccgcatcatgcgcag 2682551
to top
>emb|AJ810851.1| Streptomyces sp. DSM 40477, tobramycin biosynthesis gene cluster region
          Length = 43220

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 548   tccgccgtggttggacacgat 568
             |||||||||||||||||||||
Sbjct: 40416 tccgccgtggttggacacgat 40436
to top
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0002A19, complete sequence
          Length = 139052

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 146   ggtgcgaaatatggtggaaatggcgaga 173
             |||||||||| |||||||||||| ||||
Sbjct: 29983 ggtgcgaaatttggtggaaatggagaga 29956
to top
>ref|XM_368909.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00335.4) partial mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 549  ccgccgtggttggacacgatgatg 572
            |||||||||||||||| |||||||
Sbjct: 1148 ccgccgtggttggacaggatgatg 1125
to top
>gb|AY248747.1| Xanthomonas campestris pv. vesicatoria OpgH (opgH) gene, complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 439  gatgtgttcgcgggtgatgtcgctgagc 466
            |||||| ||||||||| |||||||||||
Sbjct: 1051 gatgtgctcgcgggtggtgtcgctgagc 1024
to top
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06,
              complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 146    ggtgcgaaatatggtggaaatggcgaga 173
              |||||||||| |||||||||||| ||||
Sbjct: 158442 ggtgcgaaatttggtggaaatggagaga 158415
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 439    gatgtgttcgcgggtgatgtcgctgagc 466
              |||||| ||||||||| |||||||||||
Sbjct: 766325 gatgtgctcgcgggtggtgtcgctgagc 766298
to top
>emb|BX897673.1| Neurospora crassa DNA linkage group III BAC clone B13M15
          Length = 63598

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gtgcgttgcgttgcgttgcg 315
             ||||||||||||||||||||
Sbjct: 42541 gtgcgttgcgttgcgttgcg 42560
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 439     gatgtgttcgcgggtgatgtcgctgagc 466
               |||||| ||||||||| |||||||||||
Sbjct: 4277328 gatgtgctcgcgggtggtgtcgctgagc 4277355
to top
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gtgcgttgcgttgcgttgcg 315
             ||||||||||||||||||||
Sbjct: 26559 gtgcgttgcgttgcgttgcg 26540
to top
>gb|AE011690.1| Xanthomonas axonopodis pv. citri str. 306,  section 68 of 469 of the
            complete genome
          Length = 11141

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 439  gatgtgttcgcgggtgatgtcgctgagc 466
            |||||| ||||||||| |||||||||||
Sbjct: 3644 gatgtgctcgcgggtggtgtcgctgagc 3617
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 69       atgtatgataaatacagaat 88
                ||||||||||||||||||||
Sbjct: 22849581 atgtatgataaatacagaat 22849562
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 146      ggtgcgaaatatggtggaaatggcgaga 173
                |||||||||| |||||||||||| ||||
Sbjct: 17868791 ggtgcgaaatttggtggaaatggagaga 17868764
to top
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
             BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gtgcgttgcgttgcgttgcg 315
             ||||||||||||||||||||
Sbjct: 77465 gtgcgttgcgttgcgttgcg 77484
to top
>dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-E12, full
           insert sequence
          Length = 2833

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 gtgcgttgcgttgcgttgcg 315
           ||||||||||||||||||||
Sbjct: 859 gtgcgttgcgttgcgttgcg 878
to top
>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the
            complete sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  gtgcgttgcgttgcgttgcg 315
            ||||||||||||||||||||
Sbjct: 5027 gtgcgttgcgttgcgttgcg 5008
to top
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gtgcgttgcgttgcgttgcg 315
              ||||||||||||||||||||
Sbjct: 111005 gtgcgttgcgttgcgttgcg 111024
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 439     gatgtgttcgcgggtgatgtcgctgagc 466
               |||||| ||||||||| |||||||||||
Sbjct: 4284118 gatgtgctcgcgggtggtgtcgctgagc 4284145
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 146      ggtgcgaaatatggtggaaatggcgaga 173
                |||||||||| |||||||||||| ||||
Sbjct: 17963108 ggtgcgaaatttggtggaaatggagaga 17963081
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 69       atgtatgataaatacagaat 88
                ||||||||||||||||||||
Sbjct: 22777772 atgtatgataaatacagaat 22777753
to top
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     atgtatgataaatacagaat 88
              ||||||||||||||||||||
Sbjct: 107263 atgtatgataaatacagaat 107282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,010,594
Number of Sequences: 3902068
Number of extensions: 3010594
Number of successful extensions: 51648
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50772
Number of HSP's gapped (non-prelim): 857
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top