ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal11a10 |
|---|---|
| Clone Library Name | barley_pub |
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 114 bits (285), Expect = 7e-26 Identities = 56/74 (75%), Positives = 65/74 (87%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L++FVGNLPF V SA L GLFE+AG+VEMVEVIYDKLTGRSRGFGFVTMST EEVE A + Sbjct: 87 LKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQ 146 Query: 43 RLNGYVLDGRALKV 2 + NGY +DGRA++V Sbjct: 147 QFNGYEIDGRAIRV 160 Score = 75.9 bits (185), Expect = 3e-14 Identities = 37/73 (50%), Positives = 53/73 (72%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNL + V L LF + G+V +V+YD+ +GRSRGFGFVT S+ +EV +A++ Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDS 267 Query: 40 LNGYVLDGRALKV 2 LNG LDGR+++V Sbjct: 268 LNGVDLDGRSIRV 280
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 111 bits (277), Expect = 6e-25 Identities = 55/74 (74%), Positives = 63/74 (85%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L++FVGNLPF V SAQL LFE AG+VEMVEVIYDK+TGRSRGFGFVTMS+V EVE A + Sbjct: 91 LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQ 150 Query: 43 RLNGYVLDGRALKV 2 + NGY LDGR L+V Sbjct: 151 QFNGYELDGRPLRV 164 Score = 70.9 bits (172), Expect = 9e-13 Identities = 35/73 (47%), Positives = 49/73 (67%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNL + V L LF + G V VIYD+ +GRS+GFGFVT + +EV+ A++ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264 Query: 40 LNGYVLDGRALKV 2 L+G LDGR ++V Sbjct: 265 LDGADLDGRQIRV 277
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 111 bits (277), Expect = 6e-25 Identities = 54/74 (72%), Positives = 65/74 (87%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L++FVGNLPF V SA L GLFE+AG+VE+VEVIYDKL+GRSRGFGFVTMST EEVE A + Sbjct: 88 LKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQ 147 Query: 43 RLNGYVLDGRALKV 2 + NGY +DGRA++V Sbjct: 148 QFNGYEIDGRAIRV 161 Score = 76.6 bits (187), Expect = 2e-14 Identities = 37/73 (50%), Positives = 53/73 (72%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNL + V L LF + G+V +V+YD+ +GRSRGFGFVT S+ +EV +A++ Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDS 268 Query: 40 LNGYVLDGRALKV 2 LNG LDGR+++V Sbjct: 269 LNGIDLDGRSIRV 281
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 110 bits (276), Expect = 8e-25 Identities = 55/74 (74%), Positives = 63/74 (85%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L++FVGNLPF SA L LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+ EEVE A + Sbjct: 87 LKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 146 Query: 43 RLNGYVLDGRALKV 2 + NGY LDGRAL+V Sbjct: 147 QFNGYELDGRALRV 160 Score = 75.1 bits (183), Expect = 5e-14 Identities = 38/73 (52%), Positives = 51/73 (69%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNL + V L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV A+E Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248 Query: 40 LNGYVLDGRALKV 2 L+G L+GRA++V Sbjct: 249 LDGVDLNGRAIRV 261
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 107 bits (266), Expect = 1e-23 Identities = 54/74 (72%), Positives = 62/74 (83%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L++FVGNL F SA L LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+ EEVE A + Sbjct: 87 LKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 146 Query: 43 RLNGYVLDGRALKV 2 + NGY LDGRAL+V Sbjct: 147 QFNGYELDGRALRV 160 Score = 75.1 bits (183), Expect = 5e-14 Identities = 38/73 (52%), Positives = 51/73 (69%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNL + V L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV A+E Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254 Query: 40 LNGYVLDGRALKV 2 L+G L+GRA++V Sbjct: 255 LDGVDLNGRAIRV 267
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 104 bits (259), Expect = 7e-23 Identities = 52/74 (70%), Positives = 60/74 (81%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L++FVGNL F V SAQL LFE AG+VEMVEVIYDK+TGRSRGFGFVTMST EVE A + Sbjct: 99 LKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQ 158 Query: 43 RLNGYVLDGRALKV 2 + NGY +GR L+V Sbjct: 159 QFNGYEFEGRPLRV 172 Score = 74.3 bits (181), Expect = 8e-14 Identities = 36/73 (49%), Positives = 51/73 (69%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R++VGNL + V L LF + G V VIYD+ +GRS+GFGFVT+S+ +EV++A+ Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317 Query: 40 LNGYVLDGRALKV 2 LNG LDGR ++V Sbjct: 318 LNGADLDGRQIRV 330
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 97.4 bits (241), Expect = 9e-21 Identities = 48/73 (65%), Positives = 59/73 (80%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVGNLP+ V S +L G+F+ AG VE+ EVIY++ T RSRGFGFVTMSTVEE E+AVE Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115 Query: 40 LNGYVLDGRALKV 2 LNGY +DGR L V Sbjct: 116 LNGYDMDGRQLTV 128 Score = 79.7 bits (195), Expect = 2e-15 Identities = 39/73 (53%), Positives = 53/73 (72%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNLP+ V +++L LF + G V V+ D+ TGRSRGFGFVTMS+ EV +A+ Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209 Query: 40 LNGYVLDGRALKV 2 L+G LDGRA++V Sbjct: 210 LDGQTLDGRAVRV 222
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 88.6 bits (218), Expect = 4e-18 Identities = 46/73 (63%), Positives = 56/73 (76%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVGNLP+ V S L LFEQAG VE+ EVIY++ T +SRGFGFVTMSTVEE E+AVE Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196 Query: 40 LNGYVLDGRALKV 2 N Y ++GR L V Sbjct: 197 YNRYDVNGRLLTV 209 Score = 78.2 bits (191), Expect = 5e-15 Identities = 35/73 (47%), Positives = 52/73 (71%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R++VGN+P+ + A+L LF + G V V+YD+ TGRSRGFGFVTM++ E+ +A+ Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290 Query: 40 LNGYVLDGRALKV 2 L+G LDGR ++V Sbjct: 291 LDGQSLDGRTIRV 303
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 86.7 bits (213), Expect = 2e-17 Identities = 44/73 (60%), Positives = 56/73 (76%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVGNLP+ + S L LF+QAG VE+ EVIY++ T RSRGFGFVTMSTVEE ++AVE Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157 Query: 40 LNGYVLDGRALKV 2 + Y L+GR L V Sbjct: 158 YSQYDLNGRLLTV 170 Score = 77.0 bits (188), Expect = 1e-14 Identities = 34/73 (46%), Positives = 52/73 (71%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R++VGN+P+ + A+L +F + G V V++D+ +GRSRGFGFVTMS+ E+ EA+ Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251 Query: 40 LNGYVLDGRALKV 2 L+G LDGR ++V Sbjct: 252 LDGQTLDGRTIRV 264
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 86.3 bits (212), Expect = 2e-17 Identities = 44/73 (60%), Positives = 56/73 (76%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVGNL + V S L LFEQAG+VE+ EVIY++ T +SRGFGFVTMS+V+E E AVE+ Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210 Query: 40 LNGYVLDGRALKV 2 N Y L+GR L V Sbjct: 211 FNRYDLNGRLLTV 223 Score = 82.8 bits (203), Expect = 2e-16 Identities = 40/73 (54%), Positives = 54/73 (73%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VGNLP+ V + +L LF + G V V+YD+ TGRSRGFGFVTMS V+E+ EA+ Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304 Query: 40 LNGYVLDGRALKV 2 L+G L+GRA++V Sbjct: 305 LDGQNLEGRAIRV 317
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 84.3 bits (207), Expect = 8e-17 Identities = 38/73 (52%), Positives = 55/73 (75%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R++VGNLPF + S+QL +F +AG+V VE++YD++T RSRGF FVTM +VEE +EA+ Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 40 LNGYVLDGRALKV 2 +G + GR +KV Sbjct: 175 FDGSQVGGRTVKV 187 Score = 57.8 bits (138), Expect = 8e-09 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +++V NL + + S L F +VIYD+ +GRSRGFGF+T S+ E + A++ Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277 Query: 40 LNGYVLDGRALKV 2 +N L+GR L++ Sbjct: 278 MNEVELEGRPLRL 290
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 74.7 bits (182), Expect = 6e-14 Identities = 34/73 (46%), Positives = 52/73 (71%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R++VGN+P + + +L + E+ G++E+ EV+YDK +GRSR FGFVTM TVE+ +E+ Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144 Query: 40 LNGYVLDGRALKV 2 LN + GR +KV Sbjct: 145 LNDTEIGGRKIKV 157 Score = 56.2 bits (134), Expect = 2e-08 Identities = 29/73 (39%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +V++GNL V + L F + G V +V T +S GFGFV+ S+ EEVE A++ Sbjct: 185 KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQA 244 Query: 40 LNGYVLDGRALKV 2 LN VL+G+ ++V Sbjct: 245 LNNSVLEGQKIRV 257
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 +R++VG+L F + L G+FE G +E ++++ D TGRS+G+GF+T S E ++A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 43 RLNGYVLDGRALKV 2 +LNG+ L GR +KV Sbjct: 310 QLNGFELAGRPMKV 323
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 +R++VG+L F + L G+FE G +E ++++ D TGRS+G+GF+T S E ++A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 43 RLNGYVLDGRALKV 2 +LNG+ L GR +KV Sbjct: 310 QLNGFELAGRPMKV 323
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 67.0 bits (162), Expect = 1e-11 Identities = 30/74 (40%), Positives = 49/74 (66%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 +R++VG+L F + L G+FE G ++ + ++ D TGRS+G+GF+T S E A+E Sbjct: 263 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 322 Query: 43 RLNGYVLDGRALKV 2 +LNG+ L GR ++V Sbjct: 323 QLNGFELAGRPMRV 336
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 63.9 bits (154), Expect = 1e-10 Identities = 32/73 (43%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + A+L F Q G V ++I D+ TGRSRGFGFVT + +++A++ Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 40 LNGYVLDGRALKV 2 +NG LDGR + V Sbjct: 67 MNGKELDGRTITV 79
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ QL +F + GSV ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 37 NGYVLDGRALKV 2 NG GRAL+V Sbjct: 78 NGREFSGRALRV 89
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ QL +F + GSV ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 37 NGYVLDGRALKV 2 NG GRAL+V Sbjct: 78 NGREFSGRALRV 89
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 61.6 bits (148), Expect = 5e-10 Identities = 32/73 (43%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + L F Q G V ++I D+ TGRSRGFGFVT + +++A+E Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 40 LNGYVLDGRALKV 2 +NG LDGR++ V Sbjct: 69 MNGQDLDGRSITV 81
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 61.2 bits (147), Expect = 7e-10 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + + L F G + +VI D+ TGRSRGFGFVT S+ + +A+E Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 40 LNGYVLDGRALKV 2 +NG LDGR + V Sbjct: 69 MNGKELDGRNITV 81
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 61.2 bits (147), Expect = 7e-10 Identities = 31/73 (42%), Positives = 42/73 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + L F Q G + ++I D+ TGRSRGFGFVT + + +A+E Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 40 LNGYVLDGRALKV 2 +NG LDGR + V Sbjct: 67 MNGQELDGRNITV 79
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 61.2 bits (147), Expect = 7e-10 Identities = 31/73 (42%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + L F Q G + ++I D+ TGRSRGFGFVT + +++A+E Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 40 LNGYVLDGRALKV 2 +NG LDGR++ V Sbjct: 69 MNGQDLDGRSITV 81
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 60.8 bits (146), Expect = 9e-10 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L +F + G + V V+ D+ T RSRGFGFVT +++ ++A+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 40 LNGYVLDGRALKV 2 +NG +DGR ++V Sbjct: 67 MNGKSVDGRQIRV 79
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 60.8 bits (146), Expect = 9e-10 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L +F + G + V V+ D+ T RSRGFGFVT +++ ++A+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 40 LNGYVLDGRALKV 2 +NG +DGR ++V Sbjct: 67 MNGKSVDGRQIRV 79
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 60.8 bits (146), Expect = 9e-10 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 37 NGYVLDGRALKV 2 NG GRAL+V Sbjct: 78 NGREFSGRALRV 89
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 60.8 bits (146), Expect = 9e-10 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 37 NGYVLDGRALKV 2 NG GRAL+V Sbjct: 78 NGREFSGRALRV 89
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 60.8 bits (146), Expect = 9e-10 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 37 NGYVLDGRALKV 2 NG GRAL+V Sbjct: 78 NGREFSGRALRV 89
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 60.8 bits (146), Expect = 9e-10 Identities = 32/73 (43%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + L F Q G V ++I D+ TGRSRGFGFVT + +++A+E Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 40 LNGYVLDGRALKV 2 +NG LDGR++ V Sbjct: 69 MNGQDLDGRSITV 81
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 60.8 bits (146), Expect = 9e-10 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 37 NGYVLDGRALKV 2 NG GRAL+V Sbjct: 78 NGREFSGRALRV 89
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 60.8 bits (146), Expect = 9e-10 Identities = 32/74 (43%), Positives = 45/74 (60%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++VGNL + V A L +F + GSV+ V++ D+ TGR RGFGFV + E A+E Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60 Query: 43 RLNGYVLDGRALKV 2 L+G GR LKV Sbjct: 61 ALDGAEWMGRDLKV 74
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 60.8 bits (146), Expect = 9e-10 Identities = 33/73 (45%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + + L F G V +VI D+ TGRSRGFGFVT S+ + + +A+E Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 40 LNGYVLDGRALKV 2 +NG LDGR + V Sbjct: 69 MNGKELDGRNITV 81
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 60.5 bits (145), Expect = 1e-09 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L +F + G + V V+ D+ T RSRGFGFVT +++ ++A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 40 LNGYVLDGRALKV 2 +NG +DGR ++V Sbjct: 67 MNGKSVDGRQIRV 79
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 60.5 bits (145), Expect = 1e-09 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L +F + G + V V+ D+ T RSRGFGFVT +++ ++A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 40 LNGYVLDGRALKV 2 +NG +DGR ++V Sbjct: 67 MNGKSVDGRQIRV 79
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 60.5 bits (145), Expect = 1e-09 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L +F + G + V V+ D+ T RSRGFGFVT +++ ++A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 40 LNGYVLDGRALKV 2 +NG +DGR ++V Sbjct: 67 MNGKSVDGRQIRV 79
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 60.1 bits (144), Expect = 2e-09 Identities = 31/73 (42%), Positives = 42/73 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R FVG L + L F Q G V ++I D+ +GRSRGFGFVT + + +A+E Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 40 LNGYVLDGRALKV 2 +NG LDGR + V Sbjct: 67 MNGKELDGRVITV 79
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 58.9 bits (141), Expect = 3e-09 Identities = 29/70 (41%), Positives = 41/70 (58%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V L L +F + G + V V+YD+ TGRSRGF FV +++ +EA+ER NG Sbjct: 123 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG 182 Query: 31 YVLDGRALKV 2 LDGR ++V Sbjct: 183 MELDGRRIRV 192
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 58.9 bits (141), Expect = 3e-09 Identities = 29/70 (41%), Positives = 41/70 (58%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V L L +F + G + V V+YD+ TGRSRGF FV +++ +EA+ER NG Sbjct: 121 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG 180 Query: 31 YVLDGRALKV 2 LDGR ++V Sbjct: 181 MELDGRRIRV 190
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 58.2 bits (139), Expect = 6e-09 Identities = 31/73 (42%), Positives = 42/73 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG LP+ A L FE G +E VI D+ TG+SRG+GFVTM+ E A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 40 LNGYVLDGRALKV 2 N ++DGR V Sbjct: 72 PNP-IIDGRKANV 83
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 58.2 bits (139), Expect = 6e-09 Identities = 29/73 (39%), Positives = 41/73 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L F G + V V+ D+ T RSRGFGF+T + E +A+ Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 40 LNGYVLDGRALKV 2 +NG LDGR ++V Sbjct: 67 MNGESLDGRQIRV 79
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 57.4 bits (137), Expect = 1e-08 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L F + G + V V+ D+ T RSRGFGFVT V++ ++A+ Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 40 LNGYVLDGRALKV 2 +NG +DGR ++V Sbjct: 66 MNGKSVDGRQIRV 78
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 57.0 bits (136), Expect = 1e-08 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG LP+ A L FE G +E VI D+ TG+SRG+GFVTM+ + A + Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 40 LNGYVLDGRALKV 2 N ++DGR V Sbjct: 93 PNP-IIDGRKANV 104
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/73 (39%), Positives = 40/73 (54%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L F L F G + V V+ D+ T RSRGFGF+T + E A+ Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 40 LNGYVLDGRALKV 2 +NG LDGR ++V Sbjct: 67 MNGESLDGRQIRV 79
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 55.5 bits (132), Expect = 4e-08 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G VE ++I DK+ G S G+GFV T ++ E A+ L Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 82 NGLRLQSKTIKV 93 Score = 49.7 bits (117), Expect = 2e-06 Identities = 29/72 (40%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL L +F G+V V+VI D T + +GFGFVTM+ EE A+ L Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 37 NGYVLDGRALKV 2 NGY L + L+V Sbjct: 306 NGYRLGDKILQV 317 Score = 37.4 bits (85), Expect = 0.011 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ LP + + +F + G + V+ D+ TG SRG F+ E EEA+ Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167 Query: 37 NGY 29 G+ Sbjct: 168 IGH 170
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 55.1 bits (131), Expect = 5e-08 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G VE ++I DK+ G S G+GFV T ++ E A+ L Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 82 NGLRLQSKTIKV 93 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/72 (40%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL L +F G+V V+VI D T + +GFGFVTM+ EE A+ L Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 37 NGYVLDGRALKV 2 NGY L + L+V Sbjct: 306 NGYRLGDKILQV 317 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ LP + + +F + G + V+ D+ TG SRG F+ E EEA+ Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167 Query: 37 NGY 29 NG+ Sbjct: 168 NGH 170
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 54.7 bits (130), Expect = 6e-08 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V L L +F + G + V ++YD+ + RSRGF FV V++ +EA ER NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 31 YVLDGRALKV 2 LDGR ++V Sbjct: 182 MELDGRRIRV 191
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 54.7 bits (130), Expect = 6e-08 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V L L +F + G + V ++YD+ + RSRGF FV V++ +EA ER NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 31 YVLDGRALKV 2 LDGR ++V Sbjct: 182 MELDGRRIRV 191
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 54.7 bits (130), Expect = 6e-08 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V L L +F + G + V ++YD+ + RSRGF FV V++ +EA ER NG Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181 Query: 31 YVLDGRALKV 2 LDGR ++V Sbjct: 182 MELDGRRIRV 191
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 54.7 bits (130), Expect = 6e-08 Identities = 26/72 (36%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL A L LF G+V+ V+++ D T + +G+GFV+M+ +E A+ L Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 37 NGYVLDGRALKV 2 NGY + R L+V Sbjct: 500 NGYTMGNRVLQV 511 Score = 43.5 bits (101), Expect = 1e-04 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLT-------------GRSRGFGFVTM 77 + V LP + ++ LF G +E V++I DK G+S G+GFV Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 76 STVEEVEEAVERLNGYVLDGRALKV 2 ++ E+AV LNG L + +KV Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKV 271 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTG-RSRGFGFVTMSTVEEVEEAVER 41 ++V LP + +L +F G++ ++ + +++G GF+ EE A+ Sbjct: 286 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 345 Query: 40 LNG 32 LNG Sbjct: 346 LNG 348
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 54.7 bits (130), Expect = 6e-08 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+ V N+PF L +FE+ G V VE+I+++ S+GFGFVTM ++ E A + Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQE 211 Query: 40 LNGYVLDGRALKV 2 L+G +++GR ++V Sbjct: 212 LHGSMIEGRKIEV 224
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 54.7 bits (130), Expect = 6e-08 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGNLP+ V + + F GS+ V ++ DK+TG +GFG+V + V A+ +L Sbjct: 289 VFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KL 347 Query: 37 NGYVLDGRALKV 2 N L GR L+V Sbjct: 348 NNSELMGRKLRV 359
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 54.7 bits (130), Expect = 6e-08 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +FVG+L V +QL LF + S ++++D++TG S+G+GFV + +E + A+ Sbjct: 165 IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSE 224 Query: 40 LNGYVLDGRALKV 2 + G L+GRA+KV Sbjct: 225 MQGVFLNGRAIKV 237
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 54.7 bits (130), Expect = 6e-08 Identities = 26/72 (36%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL A L LF G+V+ V+++ D T + +G+GFV+M+ +E A+ L Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 37 NGYVLDGRALKV 2 NGY + R L+V Sbjct: 464 NGYTMGNRVLQV 475 Score = 43.5 bits (101), Expect = 1e-04 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 13/85 (15%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLT-------------GRSRGFGFVTM 77 + V LP + ++ LF G +E V++I DK G+S G+GFV Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210 Query: 76 STVEEVEEAVERLNGYVLDGRALKV 2 ++ E+AV LNG L + +KV Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKV 235 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTG-RSRGFGFVTMSTVEEVEEAVER 41 ++V LP + +L +F G++ ++ + +++G GF+ EE A+ Sbjct: 250 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 309 Query: 40 LNG 32 LNG Sbjct: 310 LNG 312
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 54.3 bits (129), Expect = 8e-08 Identities = 26/67 (38%), Positives = 39/67 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V NLP + QL +F + GS+ ++ DKLTGR RG FV + EE +EA+ L Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274 Query: 37 NGYVLDG 17 N + +G Sbjct: 275 NNVIPEG 281 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G + ++ D TG S G+ FV ++ + + A++ L Sbjct: 129 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 188 Query: 37 NGYVLDGRALKV 2 NG + + LKV Sbjct: 189 NGITVRNKRLKV 200
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 54.3 bits (129), Expect = 8e-08 Identities = 26/67 (38%), Positives = 39/67 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V NLP + QL +F + GS+ ++ DKLTGR RG FV + EE +EA+ L Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272 Query: 37 NGYVLDG 17 N + +G Sbjct: 273 NNVIPEG 279 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G + ++ D TG S G+ FV ++ + + A++ L Sbjct: 127 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVL 186 Query: 37 NGYVLDGRALKV 2 NG + + LKV Sbjct: 187 NGITVRNKRLKV 198
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 53.9 bits (128), Expect = 1e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 53.9 bits (128), Expect = 1e-07 Identities = 25/71 (35%), Positives = 40/71 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++G++P+ Q+ L G V +++++D TGRS+G+ F+ +E AV L Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 37 NGYVLDGRALK 5 NGY L R LK Sbjct: 80 NGYQLGSRFLK 90
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 53.9 bits (128), Expect = 1e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 53.9 bits (128), Expect = 1e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 53.9 bits (128), Expect = 1e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 53.1 bits (126), Expect = 2e-07 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 346 NGYRLGERVLQV 357 Score = 52.0 bits (123), Expect = 4e-07 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + + LF G +E +++ DK+TG+S G+GFV S + ++A+ L Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 101 NGLKLQTKTIKV 112 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + ++ LF Q G + ++ D+ TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 53.1 bits (126), Expect = 2e-07 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 346 NGYRLGERVLQV 357 Score = 52.0 bits (123), Expect = 4e-07 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + + LF G +E +++ DK+TG+S G+GFV S + ++A+ L Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 101 NGLKLQTKTIKV 112 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + ++ LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 53.1 bits (126), Expect = 2e-07 Identities = 28/58 (48%), Positives = 35/58 (60%) Frame = -3 Query: 175 LXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 L F G V ++I D+ T RSRGFGFVT ST E + A+E +NG LDGR + V Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 53.1 bits (126), Expect = 2e-07 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGN+P+ V Q+ +F Q G V+ +++ D TG +G+GF E AV +L Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68 Query: 37 NGYVLDGRALKV 2 N L R ++V Sbjct: 69 NNSELGPRKIRV 80
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 101 NGLRLQTKTIKV 112 Score = 51.6 bits (122), Expect = 5e-07 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 339 NGYRLGDRVLQV 350 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 101 NGLRLQTKTIKV 112 Score = 51.6 bits (122), Expect = 5e-07 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 338 NGYRLGDRVLQV 349 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 101 NGLRLQTKTIKV 112 Score = 51.6 bits (122), Expect = 5e-07 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 338 NGYRLGDRVLQV 349 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 52.4 bits (124), Expect = 3e-07 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGNLP+ + + L F GS+ V ++ + LTG RGFG+V + V A+ +L Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KL 351 Query: 37 NGYVLDGRALKV 2 N L GR L+V Sbjct: 352 NNSELMGRKLRV 363 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMV 134 VFVGNLP +L F++ G VE V Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESV 218
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 364 NGYRLGDRVLQV 375 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + + LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 113 NGLRLQTKTIKV 124 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198 Query: 37 NG 32 NG Sbjct: 199 NG 200
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EAV+ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223 Query: 37 NGY 29 N + Sbjct: 224 NNH 226 Score = 29.3 bits (64), Expect = 2.9 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL V L F Q G +E V+ + D + F+ + +A+E + Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 37 NGYVLDGRALKV 2 NG L+G +++ Sbjct: 392 NGKDLEGENIEI 403
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EAV+ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223 Query: 37 NGY 29 N + Sbjct: 224 NNH 226 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL V L F Q G +E V+ + D + F+ + +A+E + Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 37 NGYVLDGRALKV 2 NG L+G +++ Sbjct: 392 NGKDLEGENIEI 403
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EAV+ Sbjct: 74 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 133 Query: 37 NGY 29 N + Sbjct: 134 NNH 136 Score = 29.3 bits (64), Expect = 2.9 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL V L F Q G +E V+ + D + F+ + +A+E + Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 301 Query: 37 NGYVLDGRALKV 2 NG L+G +++ Sbjct: 302 NGKDLEGENIEI 313
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 52.4 bits (124), Expect = 3e-07 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGNLP+ V + L F GS+ V ++ + LTG RGFG+V + V A+ +L Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KL 345 Query: 37 NGYVLDGRALKV 2 N L GR L+V Sbjct: 346 NNSELMGRKLRV 357 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMV 134 VFVGNLP +L F++ G VE V Sbjct: 185 VFVGNLPVTCNKKKLKSFFKEYGQVESV 212
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/73 (36%), Positives = 40/73 (54%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + A L F G V +VI D+ TGRSRGFGFV + A+ Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 40 LNGYVLDGRALKV 2 ++G L+GR ++V Sbjct: 96 MDGKELNGRHIRV 108
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 359 NGYRLGDRVLQV 370 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + + LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 108 NGLRLQTKTIKV 119 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 193 Query: 37 NG 32 NG Sbjct: 194 NG 195
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 52.4 bits (124), Expect = 3e-07 Identities = 31/72 (43%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 352 NGYRLGDRVLQV 363 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + + LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 37 NGYVLDGRALKV 2 NG L + +KV Sbjct: 101 NGLRLQTKTIKV 112 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 52.4 bits (124), Expect = 3e-07 Identities = 29/72 (40%), Positives = 43/72 (59%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVE+V+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAM-N 72 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FEQ G +E++E++ D+ +G+ RGF FVT V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 162
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/67 (35%), Positives = 39/67 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V NLP + +L +F + G++ ++ DKLTGR RG FV + EE +EA+ L Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249 Query: 37 NGYVLDG 17 N + +G Sbjct: 250 NNVIPEG 256 Score = 41.2 bits (95), Expect = 7e-04 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G + ++ D TG S G+ FV ++ + + A++ + Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163 Query: 37 NGYVLDGRALKV 2 NG + + LKV Sbjct: 164 NGITVRNKRLKV 175
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/72 (31%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG LP+ + + +F Q G + + ++ DK TG+S+GF F+ AV+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 37 NGYVLDGRALKV 2 NG + GR ++V Sbjct: 98 NGIKIKGRTIRV 109
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 52.0 bits (123), Expect = 4e-07 Identities = 26/72 (36%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L F V +QL F Q G+V V V D +T RS G+G+V + ++ A++ L Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 37 NGYVLDGRALKV 2 N L G+ ++V Sbjct: 98 NYIPLYGKPIRV 109 Score = 44.3 bits (103), Expect = 9e-05 Identities = 22/72 (30%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + L F G++ +V D +G+S+G+GFV + E ++A+E+L Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184 Query: 37 NGYVLDGRALKV 2 NG +L+ + + V Sbjct: 185 NGMLLNDKQVYV 196 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V NL + +L +F G+V +V+ D G S+G GFV +T EE EA+ +L Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEAMSQL 378 Query: 37 NGYVLDGRALKV 2 +G +++ + L V Sbjct: 379 SGKMIESKPLYV 390 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/68 (33%), Positives = 33/68 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+V NL L F + G + V+ D G+S+GFGFV ++ AVE L Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVESL 275 Query: 37 NGYVLDGR 14 NG+ D + Sbjct: 276 NGHKFDDK 283
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 52.0 bits (123), Expect = 4e-07 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV + + +L +F + G+V V ++ + +T SRGFGF++ STVEE A++ L Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162 Query: 37 NGYVLDGRALKV 2 N GR L V Sbjct: 163 NSQEFYGRVLNV 174
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 52.0 bits (123), Expect = 4e-07 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGNL F L F G ++ + + D +GR +GFG+VT S ++ ++ VE + Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-M 426 Query: 37 NGYVLDGRALKV 2 NG+ + GR ++ Sbjct: 427 NGHFIAGRPCRL 438 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/72 (36%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG L + V L FE+ G++ VI D +GRS+G+G+V T E + AV Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324 Query: 37 NGYVLDGRALKV 2 +DGR + + Sbjct: 325 GTKEIDGRMVNL 336
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 51.6 bits (122), Expect = 5e-07 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + A E+ Sbjct: 117 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 174 Query: 40 LNGYVLDGRALKV 2 L+G V++GR ++V Sbjct: 175 LHGTVVEGRKIEV 187
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 51.6 bits (122), Expect = 5e-07 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 37 NGYVLDGRALKV 2 NGY L R L+V Sbjct: 338 NGYRLGDRVLQV 349 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/67 (35%), Positives = 39/67 (58%) Frame = -3 Query: 202 LPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVL 23 LP + +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ LNG L Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105 Query: 22 DGRALKV 2 + +KV Sbjct: 106 QTKTIKV 112 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/62 (37%), Positives = 35/62 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP + +L LF Q G + ++ D++TG SRG GF+ E EEA++ L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 37 NG 32 NG Sbjct: 187 NG 188
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/67 (35%), Positives = 38/67 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V NLP + QL +F + G + ++ DKLTG+ RG FV + EE +EA+ L Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257 Query: 37 NGYVLDG 17 N + +G Sbjct: 258 NNVIPEG 264 Score = 41.6 bits (96), Expect = 6e-04 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G + ++ D TG S G+ FV + + + A++ L Sbjct: 112 LIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSL 171 Query: 37 NGYVLDGRALKV 2 NG + + LKV Sbjct: 172 NGITVRNKRLKV 183
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 51.6 bits (122), Expect = 5e-07 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + A E+ Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 179 Query: 40 LNGYVLDGRALKV 2 L+G V++GR ++V Sbjct: 180 LHGTVVEGRKIEV 192
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 51.6 bits (122), Expect = 5e-07 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + A E+ Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 175 Query: 40 LNGYVLDGRALKV 2 L+G V++GR ++V Sbjct: 176 LHGTVVEGRKIEV 188
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 51.2 bits (121), Expect = 7e-07 Identities = 25/70 (35%), Positives = 38/70 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG L + + L FE G V VIY++ T RSRG+G+V E+A++ + Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 229 Query: 37 NGYVLDGRAL 8 G +DGR + Sbjct: 230 QGKEIDGRPI 239 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/72 (30%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+GNL F + LF + G V V + T + +GFG+V S +E+ ++A++ L Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 328 Query: 37 NGYVLDGRALKV 2 G +D R +++ Sbjct: 329 QGEYIDNRPVRL 340
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 51.2 bits (121), Expect = 7e-07 Identities = 23/67 (34%), Positives = 39/67 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V NLP + +L +F + G++ ++ DKLTG+ RG FV + EE +EA+ L Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232 Query: 37 NGYVLDG 17 N + +G Sbjct: 233 NNVIPEG 239 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G + ++ D TG S G+ FV ++ + + A++ L Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 146 Query: 37 NGYVLDGRALKV 2 NG + + LKV Sbjct: 147 NGVTVRNKRLKV 158
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 51.2 bits (121), Expect = 7e-07 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSR----GFGFVTMSTVEEVEE 53 RVFVG L +++ LFE G+V V + + ++ +R G FVT + E+V++ Sbjct: 45 RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDK 104 Query: 52 AVERLNGYVLDGRALKV 2 A+E LNG LD R + V Sbjct: 105 AIETLNGKTLDDREIVV 121 Score = 32.0 bits (71), Expect = 0.45 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 106 RSRGFGFVTMSTVEEVEEAVERLNG 32 R RGFGFV+ + E+ A+E +NG Sbjct: 256 RGRGFGFVSFANAEDQSRAIEEMNG 280
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/73 (32%), Positives = 43/73 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L L +F + G + + ++ D+ T +SRGF FVT+ + + ++A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 40 LNGYVLDGRALKV 2 +NG LDG+A+KV Sbjct: 69 MNGKSLDGKAIKV 81
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 50.8 bits (120), Expect = 9e-07 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+G LP+ + + +F Q G + + ++ DK TG+S+GF F+ AV+ Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97 Query: 37 NGYVLDGRALKV 2 NG + GR ++V Sbjct: 98 NGIKIKGRTIRV 109
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 50.8 bits (120), Expect = 9e-07 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L +FVG LP S QL LF Q G V+ V+ +K + RGFG+VT S +E+V+ A++ Sbjct: 3 LTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Query: 43 RLNGY 29 + + Sbjct: 63 EITTF 67 Score = 38.5 bits (88), Expect = 0.005 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV--- 47 VF+ NL F +L L +Q G ++ V ++ T S+G F T E ++ + Sbjct: 336 VFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAA 395 Query: 46 ---ERLNGYVLDGRALKV 2 G LDGR LKV Sbjct: 396 SPENEAGGLKLDGRQLKV 413 Score = 37.7 bits (86), Expect = 0.008 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+ + NL F L +F Q G+V V I K G+ RGFGFV + E +A++ Sbjct: 114 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVN-IPRKPDGKMRGFGFVQFKNLLEAGKALKG 172 Query: 40 LNGYVLDGRALKV 2 +N + GR + V Sbjct: 173 MNMKEIKGRTVAV 185
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 50.8 bits (120), Expect = 9e-07 Identities = 25/73 (34%), Positives = 42/73 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L L +F + G + V ++ D+ T +SRGF FVT + + ++A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 40 LNGYVLDGRALKV 2 +NG LDG+A+KV Sbjct: 69 MNGKSLDGKAIKV 81
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G + V+ D T RSRGFGFVT S VEEV+ ++ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS- 86 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 87 ARPHKVDGRVVE 98 Score = 43.1 bits (100), Expect = 2e-04 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 119 KIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 50.4 bits (119), Expect = 1e-06 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L +FVG LP S QL LF Q G V+ V+ +K + RGFG+VT S +E+V+ A++ Sbjct: 3 LTLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Query: 43 RLNGY 29 + + Sbjct: 63 EITTF 67 Score = 36.2 bits (82), Expect = 0.024 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL F L + +Q G ++ V V+ T S+G F T E ++ + Sbjct: 326 VFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAA 385 Query: 37 N------GYVLDGRALKV 2 + G LDGR LKV Sbjct: 386 SPEAEGGGLKLDGRQLKV 403
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G + V+ D T RSRGFGFVT S VEEV+ ++ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS- 86 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 87 ARPHKVDGRVVE 98 Score = 40.8 bits (94), Expect = 0.001 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L E G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 119 KIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (Poly(A)-binding protein II) (PABII) Length = 166 Score = 50.4 bits (119), Expect = 1e-06 Identities = 28/72 (38%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+VGN+ + V +L F GSV V ++ DK TG +GF ++ S V A+ L Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNAL-LL 115 Query: 37 NGYVLDGRALKV 2 NG +L R LKV Sbjct: 116 NGSMLHERPLKV 127
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 50.1 bits (118), Expect = 2e-06 Identities = 26/71 (36%), Positives = 38/71 (53%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+LP + QL FEQ G V + V K TG S+G+GFV E + E + Sbjct: 47 LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETM 106 Query: 37 NGYVLDGRALK 5 N Y++ R +K Sbjct: 107 NNYLMGERIIK 117
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 50.1 bits (118), Expect = 2e-06 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S + EV+ A+ Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS- 68 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 69 ARPHTIDGRVVE 80 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G +E E+I DK +G+ RGFGFVT + + V++ V Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 49.7 bits (117), Expect = 2e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L +EQ G++ V+ D + RSRGFGFVT S + EV+ A+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAM-A 68 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 69 TRPHTIDGRVVE 80 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G ++ +E+I DK +G+ RGF FVT + V++ V Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIV 158
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/59 (42%), Positives = 33/59 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L V + FEQ G VE +++DK T R RGFGFVT + VE+ E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169 Score = 38.5 bits (88), Expect = 0.005 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++F+G L + L F + G + V+ D T RSRGFGFVT + V++ + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/59 (42%), Positives = 33/59 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L V + FEQ G VE +++DK T R RGFGFVT + VE+ E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169 Score = 38.5 bits (88), Expect = 0.005 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++F+G L + L F + G + V+ D T RSRGFGFVT + V++ + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 49.3 bits (116), Expect = 3e-06 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM-C 94 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 95 ARPHKVDGRVVE 106 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 49.3 bits (116), Expect = 3e-06 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM-C 94 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 95 ARPHKVDGRVVE 106 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 49.3 bits (116), Expect = 3e-06 Identities = 25/73 (34%), Positives = 45/73 (61%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVGNL + ++ LF++ G+V +++ R +GFV + V +V++A++ Sbjct: 87 KIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKE 138 Query: 40 LNGYVLDGRALKV 2 LNG V+DG+ LKV Sbjct: 139 LNGRVVDGQPLKV 151 Score = 48.5 bits (114), Expect = 5e-06 Identities = 25/73 (34%), Positives = 43/73 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+GNL + +L LFE+ G+V +V+ + +GFV M T ++ +A++ Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQN 59 Query: 40 LNGYVLDGRALKV 2 LNGY L+ A+KV Sbjct: 60 LNGYTLNEFAIKV 72
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 49.3 bits (116), Expect = 3e-06 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM-C 94 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 95 ARPHKVDGRVVE 106 Score = 44.3 bits (103), Expect = 9e-05 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 31 YVLDGRALKV 2 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 31 YVLDGRALKV 2 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 31 YVLDGRALKV 2 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 31 YVLDGRALKV 2 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 49.3 bits (116), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77 Query: 31 YVLDGRALKV 2 VLDGR L+V Sbjct: 78 AVLDGRELRV 87
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 49.3 bits (116), Expect = 3e-06 Identities = 23/63 (36%), Positives = 39/63 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG +P + +L LFE+AG + + ++ D L+G++RG+ F+T E +EAV+ Sbjct: 167 VFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLC 226 Query: 37 NGY 29 + Y Sbjct: 227 DSY 229
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 49.3 bits (116), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV N+ + +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 37 NGYVLDGRALKV 2 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL + +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 37 NGYVLDGRALKV 2 NG ++ + L V Sbjct: 362 NGRIVGSKPLHV 373 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 37 NGYVLDGRALKV 2 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91 Score = 31.2 bits (69), Expect = 0.76 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHM 165 Query: 37 NGYVLDGRALKV 2 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 49.3 bits (116), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV N+ + +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 37 NGYVLDGRALKV 2 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL + +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 37 NGYVLDGRALKV 2 NG ++ + L V Sbjct: 362 NGRIVGSKPLHV 373 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 37 NGYVLDGRALKV 2 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91 Score = 31.2 bits (69), Expect = 0.76 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHM 165 Query: 37 NGYVLDGRALKV 2 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 49.3 bits (116), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV N+ + +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 37 NGYVLDGRALKV 2 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL + +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 37 NGYVLDGRALKV 2 NG V+ + L V Sbjct: 362 NGRVVGSKPLHV 373 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 37 NGYVLDGRALKV 2 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91 Score = 31.2 bits (69), Expect = 0.76 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHM 165 Query: 37 NGYVLDGRALKV 2 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 49.3 bits (116), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV N+ + +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 37 NGYVLDGRALKV 2 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL + +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 37 NGYVLDGRALKV 2 NG ++ + L V Sbjct: 362 NGRIVGSKPLHV 373 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 37 NGYVLDGRALKV 2 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91 Score = 31.2 bits (69), Expect = 0.76 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHM 165 Query: 37 NGYVLDGRALKV 2 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 49.3 bits (116), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV N+ + +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 37 NGYVLDGRALKV 2 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL + +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 37 NGYVLDGRALKV 2 NG ++ + L V Sbjct: 362 NGRIVGSKPLHV 373 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 37 NGYVLDGRALKV 2 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91 Score = 31.2 bits (69), Expect = 0.76 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHM 165 Query: 37 NGYVLDGRALKV 2 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 49.3 bits (116), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV N+ + +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 37 NGYVLDGRALKV 2 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL + +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 37 NGYVLDGRALKV 2 NG ++ + L V Sbjct: 362 NGRIVGSKPLHV 373 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 37 NGYVLDGRALKV 2 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91 Score = 31.2 bits (69), Expect = 0.76 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDD--NGSKGYAYVHFDSLAAANRAIWHM 165 Query: 37 NGYVLDGRALKV 2 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 48.9 bits (115), Expect = 4e-06 Identities = 23/74 (31%), Positives = 42/74 (56%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 +++FVGNL + ++ LF Q G + +++ + FGFV M + E +EA++ Sbjct: 2 VKIFVGNLSPNTTAEEIRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQ 53 Query: 43 RLNGYVLDGRALKV 2 L+ Y+L+G A+ V Sbjct: 54 NLHHYMLNGMAMNV 67 Score = 34.3 bits (77), Expect = 0.090 Identities = 19/73 (26%), Positives = 34/73 (46%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ VGN+ + +L FE+ G V +++ D + FV M VE+ EA+ Sbjct: 79 KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKD--------YAFVHMERVEDAMEAISG 130 Query: 40 LNGYVLDGRALKV 2 L+ G+ + V Sbjct: 131 LDNTAFQGKLMSV 143
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 48.9 bits (115), Expect = 4e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S++ EV+ A+ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-A 80 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 81 ARPHSIDGRVVE 92 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G ++ +E+I D+ +G+ RGFGFVT + V++ V Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 48.9 bits (115), Expect = 4e-06 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L L +F + G + + ++ D+ T +SRGF FVT + + ++ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 40 LNGYVLDGRALKV 2 +NG LDG+A+KV Sbjct: 69 MNGKSLDGKAIKV 81
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 48.9 bits (115), Expect = 4e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S++ EV+ A+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-A 68 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 69 ARPHSIDGRVVE 80 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FE+ G ++ +E+I D+ +G+ RGFGFVT + V++ V Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A++++ Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 37 NGYVLDGRALK 5 G L GR ++ Sbjct: 168 GGQWLGGRQIR 178
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A++++ Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 37 NGYVLDGRALK 5 G L GR ++ Sbjct: 168 GGQWLGGRQIR 178
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 48.5 bits (114), Expect = 5e-06 Identities = 24/70 (34%), Positives = 39/70 (55%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 + NL + L FE+ G + V + DK + +S+GFGFV + E A++R +G Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82 Query: 31 YVLDGRALKV 2 ++DGR L+V Sbjct: 83 KLVDGRELRV 92
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 48.5 bits (114), Expect = 5e-06 Identities = 27/72 (37%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NLP+ + L +F++ G V +V D G SRGFG V T +E+ A++ Sbjct: 221 VFIINLPYSMNWQSLKDMFKECGHVLRADVELD-FNGFSRGFGSVIYPTEDEMIRAIDTF 279 Query: 37 NGYVLDGRALKV 2 NG ++GR L+V Sbjct: 280 NGMEVEGRVLEV 291
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 48.5 bits (114), Expect = 5e-06 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFE-QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +FVG+L A L LF+ + SV+ V V+ D LTG SR FGFV +E A+ Sbjct: 194 LFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIE 253 Query: 40 LNGYVLDGRALKV 2 ++G GRAL+V Sbjct: 254 MSGKWFQGRALRV 266 Score = 29.6 bits (65), Expect = 2.2 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG L QL LF+ G + V + + GFV + E +++ L Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRI------PNGKNCGFVKFEKRIDAEASIQGL 415 Query: 37 NGYVLDGRALKV 2 G+++ G +++ Sbjct: 416 QGFIVGGSPIRL 427
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 48.1 bits (113), Expect = 6e-06 Identities = 24/72 (33%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG+L V L F+ S V++D TG SRG+GFV+ ++ ++ + A++ + Sbjct: 163 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 222 Query: 37 NGYVLDGRALKV 2 G L+GR L++ Sbjct: 223 QGQDLNGRPLRI 234
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 48.1 bits (113), Expect = 6e-06 Identities = 22/73 (30%), Positives = 42/73 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 RV+VG++ F + + F G ++ + + +D +T + +GF FV E + A+E+ Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 40 LNGYVLDGRALKV 2 +NG ++ GR +KV Sbjct: 191 MNGALMGGRNIKV 203 Score = 32.7 bits (73), Expect = 0.26 Identities = 15/73 (20%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R++V ++ + + +FE G + ++ +G+GF+ + + ++EA+ Sbjct: 228 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 287 Query: 40 LNGYVLDGRALKV 2 +N + L G+ L+V Sbjct: 288 MNLFDLGGQLLRV 300
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 48.1 bits (113), Expect = 6e-06 Identities = 27/72 (37%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L +F G+ V+V+ D TGRSRGFGFV EE ++AV + Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 37 NGYVLDGRALKV 2 NG ++GR + V Sbjct: 252 NGKEVNGRMIYV 263 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + L F G++ +V+ D+ SRG+GFV T E A++ + Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRAIQTM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/74 (31%), Positives = 40/74 (54%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + G S+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVSTKPLYV 365
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 48.1 bits (113), Expect = 6e-06 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L FE+ G++ V V+ D T RSRGFGF+T S ++EA ++ Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA-QK 90 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 91 SRPHKIDGRVVE 102 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV-- 47 ++FVG L + F+ G++ + ++ DK TG+ RGF FV + V++ V Sbjct: 123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 182 Query: 46 --ERLNGYVLD 20 +LNG ++D Sbjct: 183 KQHQLNGKMVD 193
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 48.1 bits (113), Expect = 6e-06 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 44 ++F+G L + L F + G V + D +TGRSRGFGFV E V++ ++ Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155 Query: 43 ---RLNGYVLDGRALK 5 +LNG V+D + K Sbjct: 156 KEHKLNGKVIDPKRAK 171 Score = 37.7 bits (86), Expect = 0.008 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ +E+ Sbjct: 181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 48.1 bits (113), Expect = 6e-06 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L FEQ G + V V+ D T RSRGFGF+T S V++A + Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDA-QN 76 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 77 ARPHKVDGRVVE 88 Score = 35.8 bits (81), Expect = 0.031 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 53 ++FVG + + L F+Q G+V ++ DK T + RGF FV + V++ Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDK 164
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 48.1 bits (113), Expect = 6e-06 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 44 ++F+G L + L F + G V + D +TGRSRGFGFV E V++ ++ Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 43 ---RLNGYVLDGRALK 5 +LNG V+D + K Sbjct: 158 KEHKLNGKVIDPKRAK 173 Score = 37.7 bits (86), Expect = 0.008 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ +E+ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 48.1 bits (113), Expect = 6e-06 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 44 ++F+G L + L F + G V + D +TGRSRGFGFV E V++ ++ Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 43 ---RLNGYVLDGRALK 5 +LNG V+D + K Sbjct: 158 KEHKLNGKVIDPKRAK 173 Score = 37.7 bits (86), Expect = 0.008 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ +E+ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 48.1 bits (113), Expect = 6e-06 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FV NLP+ L LF + G + + D LT + +GF F+T E +A Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462 Query: 40 LNGYVLDGRALKV 2 ++G V GR L V Sbjct: 463 VDGQVFQGRMLHV 475 Score = 43.9 bits (102), Expect = 1e-04 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGR---SRGFGFVTMSTVEEVEEAV 47 +F+ NL F +L +F + G+V+ + K S GFGFV E+ ++A+ Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791 Query: 46 ERLNGYVLDGRALKV 2 ++L G+V+DG L+V Sbjct: 792 KQLQGHVVDGHKLEV 806 Score = 35.4 bits (80), Expect = 0.040 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKL-TGRSRGFGFVTMSTVEEVEEAVE 44 ++ V N+PF S ++ LF G ++ V + TG RGFGFV T ++ + A Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892 Query: 43 RL 38 L Sbjct: 893 AL 894
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 48.1 bits (113), Expect = 6e-06 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V N+ V +L F Q G++ +++ D+ G+S+GFGFV ST EE +AV+ Sbjct: 306 IYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDE-KGKSKGFGFVCFSTPEEAIDAVKTF 364 Query: 37 NGYVLDGRALKV 2 +G + G+ L V Sbjct: 365 HGQMFHGKPLYV 376 Score = 41.2 bits (95), Expect = 7e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV NLP V +A L +F++ G++ +V + G+SRG+GFV + A++ L Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLE-DGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 37 NGYVLDGRALKV 2 N ++ + + V Sbjct: 173 NSTIVADKEIYV 184 Score = 36.6 bits (83), Expect = 0.018 Identities = 19/72 (26%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V L F + S+ V + D +GRS +G+ + ++ A+E+ Sbjct: 26 LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85 Query: 37 NGYVLDGRALKV 2 N +L+G+ ++V Sbjct: 86 NNSLLNGKMIRV 97 Score = 27.7 bits (60), Expect = 8.4 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL V L F + G + + + D+ RG+ FV E+ A E + Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPEDARRAAETV 261 Query: 37 NGYVLDGRALKV 2 NG + L V Sbjct: 262 NGTKFGSKCLYV 273
>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 47.8 bits (112), Expect = 8e-06 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S +E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKQEAKNAIKQL 116 Query: 37 NGY-VLDGRALKV 2 N Y + +GR L V Sbjct: 117 NNYEIRNGRLLGV 129 Score = 32.7 bits (73), Expect = 0.26 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = -3 Query: 151 GSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 G+VE V+ I D + FV S E+ EA++ LNG VLDG ++V Sbjct: 257 GAVERVKKIRD--------YAFVHFSNREDAVEAMKALNGKVLDGSPIEV 298
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 47.4 bits (111), Expect = 1e-05 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +V+VGNLP V ++ +F + G ++ V++ +GR F FV + E+AV Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAEDAVRA 65 Query: 40 LNGYVLDGRALKV 2 +GY DGR ++V Sbjct: 66 RDGYEFDGRRIRV 78
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 47.4 bits (111), Expect = 1e-05 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE---EA 50 R+FVG + F + L F Q GSV+ V+++ D+ G S+G+GFVT T E+ + + Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 49 VERLN 35 E+LN Sbjct: 93 AEKLN 97
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 47.4 bits (111), Expect = 1e-05 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE---EA 50 R+FVG + F + L F Q GSV+ V+++ D+ G S+G+GFVT T E+ + + Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 49 VERLN 35 E+LN Sbjct: 93 AEKLN 97
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L + FEQ G V+ +++DK T R RGFGFVT + + VE+ E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 40.8 bits (94), Expect = 0.001 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 40 LNGYVLDGRAL 8 + + LD + + Sbjct: 81 -SRHELDSKTI 90
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L + FEQ G V+ +++DK T R RGFGFVT + + VE+ E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 40.8 bits (94), Expect = 0.001 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 40 LNGYVLDGRAL 8 + + LD + + Sbjct: 81 -SRHELDSKTI 90
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/59 (38%), Positives = 33/59 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L + FEQ G V+ +++DK T R RGFGFVT + + VE+ E Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 40.8 bits (94), Expect = 0.001 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 40 LNGYVLDGRAL 8 + + LD + + Sbjct: 81 -SRHELDSKTI 90
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/71 (32%), Positives = 41/71 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L F + G+V ++++ D TGRSRGFGF++ V+E V+ Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK- 218 Query: 40 LNGYVLDGRAL 8 ++LDG+ + Sbjct: 219 -TQHILDGKVI 228 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG + V + F Q G++ +++ DK TG+SRGFGFVT + + V+ + Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQ 302
>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 595 Score = 47.0 bits (110), Expect = 1e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S +E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMD-FNGNNRGYAFVTFSNKQEAKNAIKQL 116 Query: 37 NGY-VLDGRALKV 2 N Y + GR L V Sbjct: 117 NNYEIRTGRLLGV 129 Score = 32.7 bits (73), Expect = 0.26 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = -3 Query: 151 GSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 G+VE V+ I D + FV S E+ EA++ LNG VLDG ++V Sbjct: 257 GAVERVKKIRD--------YAFVHFSNREDAVEAMKALNGKVLDGSPIEV 298
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/71 (30%), Positives = 37/71 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A+ + Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158 Query: 37 NGYVLDGRALK 5 G L GR ++ Sbjct: 159 GGQWLGGRQIR 169
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/71 (30%), Positives = 37/71 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A+ + Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175 Query: 37 NGYVLDGRALK 5 G L GR ++ Sbjct: 176 GGQWLGGRQIR 186
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 46.6 bits (109), Expect = 2e-05 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L +F G+ V+V+ D +GRSRGFGFV EE ++AV + Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 37 NGYVLDGRALKV 2 NG ++GR + V Sbjct: 252 NGKEVNGRMIYV 263 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + L F G++ +V+ D+ SRG+GFV T E A++ + Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQTM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 38.5 bits (88), Expect = 0.005 Identities = 23/74 (31%), Positives = 40/74 (54%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + G S+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVSTKPLYV 365
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 46.6 bits (109), Expect = 2e-05 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 R F+ N+PF V L L E+ G V VE++ D G+SRG V E +++A E Sbjct: 70 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128 Query: 43 RLNGYVLDGRALKV 2 LN + L GR LKV Sbjct: 129 VLNKHSLSGRPLKV 142 Score = 45.8 bits (107), Expect = 3e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A+ Sbjct: 204 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGIVTFEQSIEAVQAISMF 262 Query: 37 NGYVLDGRALKV 2 NG +L R + V Sbjct: 263 NGQLLFDRPMHV 274 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 652 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 709 Query: 40 LNGYVLDGRALKV 2 +NG L GR + V Sbjct: 710 MNGMKLSGREIDV 722
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/72 (30%), Positives = 42/72 (58%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVGN+ V Q+ F+ G ++ + ++YD+ TG +G+G++ + E+A++ L Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQ-L 124 Query: 37 NGYVLDGRALKV 2 NG L G+ + V Sbjct: 125 NGGELKGKKIAV 136
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 46.6 bits (109), Expect = 2e-05 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 RVF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V++A+E Sbjct: 92 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 150 Query: 43 RLNGYVLDGRALKV 2 +N Y L GR L + Sbjct: 151 TMNKYDLSGRPLNI 164 Score = 45.8 bits (107), Expect = 3e-05 Identities = 25/73 (34%), Positives = 38/73 (52%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FV NLPF + +L F Q G V E+ + G+S+G G V + E E+A Sbjct: 515 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMEN--GKSKGCGTVRFESAESAEKACRI 572 Query: 40 LNGYVLDGRALKV 2 +NG + GR + V Sbjct: 573 MNGIKISGREIDV 585 Score = 45.1 bits (105), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL F V +L +F AG+V+ ++ DK G+SRG G VT E +A+ Sbjct: 226 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 284 Query: 37 NGYVLDGRALKV 2 NG L R + V Sbjct: 285 NGQFLFDRPMHV 296
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 46.6 bits (109), Expect = 2e-05 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 R F+ N+PF V L L E+ G V VE++ D G+SRG V E +++A E Sbjct: 70 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128 Query: 43 RLNGYVLDGRALKV 2 LN + L GR LKV Sbjct: 129 VLNKHSLSGRPLKV 142 Score = 45.1 bits (105), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A+ Sbjct: 165 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 223 Query: 37 NGYVLDGRALKV 2 NG +L R + V Sbjct: 224 NGQLLFDRPMHV 235 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 613 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 670 Query: 40 LNGYVLDGRALKV 2 +NG L GR + V Sbjct: 671 MNGMKLSGREIDV 683
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 46.6 bits (109), Expect = 2e-05 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 R F+ N+PF V L L E+ G V VE++ D G+SRG V E +++A E Sbjct: 71 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 129 Query: 43 RLNGYVLDGRALKV 2 LN + L GR LKV Sbjct: 130 VLNKHSLSGRPLKV 143 Score = 45.1 bits (105), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A+ Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 263 Query: 37 NGYVLDGRALKV 2 NG +L R + V Sbjct: 264 NGQLLFDRPMHV 275 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 653 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 710 Query: 40 LNGYVLDGRALKV 2 +NG L GR + V Sbjct: 711 MNGMKLSGREIDV 723
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 46.6 bits (109), Expect = 2e-05 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 RVF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V++A+E Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 159 Query: 43 RLNGYVLDGRALKV 2 +N Y L GR L + Sbjct: 160 TMNKYDLSGRPLNI 173 Score = 45.1 bits (105), Expect = 5e-05 Identities = 25/73 (34%), Positives = 38/73 (52%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FV NLPF + +L F Q G V E+ + G+S+G G V + E E+A Sbjct: 524 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMEN--GKSKGCGTVRFDSPESAEKACRI 581 Query: 40 LNGYVLDGRALKV 2 +NG + GR + V Sbjct: 582 MNGIKISGREIDV 594 Score = 45.1 bits (105), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL F V +L +F AG+V+ ++ DK G+SRG G VT E +A+ Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 293 Query: 37 NGYVLDGRALKV 2 NG L R + V Sbjct: 294 NGQFLFDRPMHV 305
>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein| 11) Length = 281 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/72 (41%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGNL V L LF QAG + V + D+ G+ + FGFV E V A+ L Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDR-EGKPKSFGFVCFKHPESVSYAIALL 70 Query: 37 NGYVLDGRALKV 2 NG L GR + V Sbjct: 71 NGIRLYGRPINV 82
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L +F G+ V+V+ D +GRSRGFGFV EE ++AV + Sbjct: 193 VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEM 251 Query: 37 NGYVLDGRALKV 2 NG ++GR + V Sbjct: 252 NGKEVNGRMVYV 263 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/72 (31%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + L F G + +V+ D+ SRG+GFV T E A++ + Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/74 (31%), Positives = 40/74 (54%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + G S+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVSTKPLYV 365
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/71 (33%), Positives = 40/71 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L + + Q G + + V+ D T RSRGFGFVT S EV+ A+++ Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83 Query: 40 LNGYVLDGRAL 8 +++DG+ + Sbjct: 84 -RPHIIDGKTV 93 Score = 39.7 bits (91), Expect = 0.002 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV-- 47 R++V + L F + G+V E+I DK T + RGFGFVT + V++ V Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174 Query: 46 --ERLNGYVLDGR 14 +NG+ D R Sbjct: 175 KSHMVNGHRCDVR 187
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 50 ++FVG L V L F Q G+VE E+I DK +G+ RGFGFV + ++A Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L G FE G++ V+ + T RSR FGFVT S VEE + A+ Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAM-A 66 Query: 40 LNGYVLDGRALKV 2 + + +DG +++ Sbjct: 67 ASPHAVDGNTVEL 79
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/71 (33%), Positives = 34/71 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ NLPF ++ FE G+V+ V + DK T S+G FV+ S A Sbjct: 315 RLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRA 374 Query: 40 LNGYVLDGRAL 8 +G GR L Sbjct: 375 KDGSTFQGRLL 385 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/71 (36%), Positives = 36/71 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ + NLPF + LF G ++ V + K +RGFGFV STV E + A+E Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVR-LPKKFDNTTRGFGFVEYSTVREAQSAMEA 778 Query: 40 LNGYVLDGRAL 8 L L GR L Sbjct: 779 LKHTHLLGRHL 789 Score = 28.9 bits (63), Expect = 3.8 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGR-----SRGFGFVTMSTVEEVEE 53 ++V NL F +L F + R S G+GFV +++ Sbjct: 623 LYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAART 682 Query: 52 AVERLNGYVLDGRALKV 2 A + ++G VLD L V Sbjct: 683 AQKAMDGKVLDAHTLVV 699
>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 46.2 bits (108), Expect = 2e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKVEAKNAIKQL 116 Query: 37 NGY-VLDGRALKV 2 N Y + +GR L V Sbjct: 117 NNYEIRNGRLLGV 129 Score = 32.7 bits (73), Expect = 0.26 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = -3 Query: 151 GSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 G+VE V+ I D + FV S E+ EA++ LNG VLDG ++V Sbjct: 257 GAVERVKKIRD--------YAFVHFSNREDAVEAMKALNGKVLDGSPIEV 298
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ N+ + LF Q G++E V + D TG+S+GF +V E+ A Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370 Query: 40 LNGYVLDGRALKV 2 L+ + GR L + Sbjct: 371 LDKQIFQGRLLHI 383 Score = 41.6 bits (96), Expect = 6e-04 Identities = 25/71 (35%), Positives = 36/71 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ + NLPF L LF G ++ V V K +RGF FV + ++E E A+ + Sbjct: 718 KIIIKNLPFEATRKDLLELFGAFGQLKSVRVP-KKFDQSARGFAFVEFNLMKEAETAMSQ 776 Query: 40 LNGYVLDGRAL 8 L G L GR L Sbjct: 777 LEGVHLLGRRL 787 Score = 40.4 bits (93), Expect = 0.001 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGS--VEMVEVIYD-KLTGR--SRGFGFVTMSTVEEVEE 53 VFV NL F L LF+ V V+ D K +G+ S GFGFV T E+ Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 52 AVERLNGYVLDGRALKV 2 A+ L+G+VLDG L++ Sbjct: 679 AISTLDGHVLDGHKLQL 695
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/73 (31%), Positives = 39/73 (53%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+ V N+ F + + +FE G +E V + D RS+GFG++ A+E+ Sbjct: 341 RLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDD-QNRSKGFGYIQYRNPISARNALEK 399 Query: 40 LNGYVLDGRALKV 2 +NG+ L GR ++V Sbjct: 400 MNGFDLAGRNMRV 412 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 VFV L + S +L FEQAG V +++ DK++GRS+G +V + V+ A+ Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI 298
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L F L FEQ G++ V+ D + RSRGFGFVT + +EV+ A+ Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAM-T 73 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 74 ARPHKVDGRVVE 85 Score = 45.4 bits (106), Expect = 4e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163
>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 587 Score = 45.8 bits (107), Expect = 3e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKLEAKNAIKQL 116 Query: 37 NGY-VLDGRALKV 2 N Y + +GR L V Sbjct: 117 NNYEIRNGRLLGV 129 Score = 32.7 bits (73), Expect = 0.26 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = -3 Query: 151 GSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 G+VE V+ I D + FV S E+ EA++ LNG VLDG ++V Sbjct: 257 GAVERVKKIRD--------YAFVHFSNREDAVEAMKALNGKVLDGSPIEV 298
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 45.8 bits (107), Expect = 3e-05 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE---EA 50 R+FVG + F L F Q GSV+ V+++ D+ G S+G+GF+T T E+ + + Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQE 92 Query: 49 VERLN 35 E+LN Sbjct: 93 AEKLN 97
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/72 (30%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+G+L V L G+F++ S +V D +T +S G G++ EE E+A+E L Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 37 NGYVLDGRALKV 2 N ++G+ +++ Sbjct: 153 NYTKVNGKEIRI 164 Score = 31.6 bits (70), Expect = 0.58 Identities = 17/72 (23%), Positives = 31/72 (43%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NLP + F + G ++ + T + FVT + E+A++R Sbjct: 305 IFIKNLPTITTRDDILNFFSEVGPIK--SIYLSNATKVKYLWAFVTYKNSSDSEKAIKRY 362 Query: 37 NGYVLDGRALKV 2 N + G+ L V Sbjct: 363 NNFYFRGKKLLV 374
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/73 (30%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FV NL + ++L +F G +E + V +D S+GF +V + + EA Sbjct: 296 RLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRN 355 Query: 40 LNGYVLDGRALKV 2 L+G + GR L + Sbjct: 356 LDGKIFQGRLLHI 368 Score = 38.5 bits (88), Expect = 0.005 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ + NLPF + LF G + V V K +RGFGF + E E A++ Sbjct: 698 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-KKFDRSARGFGFADFVSAREAENAMDA 756 Query: 40 LNGYVLDGRAL 8 L L GR L Sbjct: 757 LKNTHLLGRRL 767 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 103 SRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 S GFGF T + + A+ +NGY LD L V Sbjct: 637 SMGFGFADFKTKAQAQAALAVMNGYTLDRHTLVV 670
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/58 (37%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG +P +L F++ G V V +IYD R RGFGF+T + V++AV Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171 Score = 39.3 bits (90), Expect = 0.003 Identities = 25/69 (36%), Positives = 32/69 (46%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L + L F Q G V ++ DK T +SRGFGFV V V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV-GTVLA 69 Query: 40 LNGYVLDGR 14 + LDGR Sbjct: 70 SRPHTLDGR 78
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 45.4 bits (106), Expect = 4e-05 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L L +F + G + V +I D+ T +SRGF F+T + + A + Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKD 67 Query: 40 LNGYVLDGRALKV 2 +NG L G+A+KV Sbjct: 68 MNGKSLHGKAIKV 80
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 45.4 bits (106), Expect = 4e-05 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N V L LF Q G V+V+ D G+S+GFGFV+ E+ +AVE + Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEM 251 Query: 37 NGYVLDGRALKV 2 NG + G+ + V Sbjct: 252 NGKEISGKIIFV 263 Score = 44.3 bits (103), Expect = 9e-05 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + +++ NL + +L F GS+ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVGSKPLYV 365 Score = 40.8 bits (94), Expect = 0.001 Identities = 22/72 (30%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + L F G++ +V+ D+ S+G+ FV T E ++A+E++ Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 45.4 bits (106), Expect = 4e-05 Identities = 22/58 (37%), Positives = 33/58 (56%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG +P +L F++ G V V +IYD R RGFGF+T + V++AV Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171 Score = 39.3 bits (90), Expect = 0.003 Identities = 25/69 (36%), Positives = 32/69 (46%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L + L F Q G V ++ DK T +SRGFGFV V V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV-GTVLA 69 Query: 40 LNGYVLDGR 14 + LDGR Sbjct: 70 SRPHTLDGR 78
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 45.1 bits (105), Expect = 5e-05 Identities = 20/70 (28%), Positives = 37/70 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVG + + +L LF + G + +++IYDK G G+GF++ + ++ L Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKEL 256 Query: 37 NGYVLDGRAL 8 NG ++G L Sbjct: 257 NGRTVNGSTL 266 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -3 Query: 100 RGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 +G+GF+ + E+ A+E NG++ G L V Sbjct: 381 KGYGFIKLINHEQALAAIETFNGFMWHGNRLVV 413
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 45.1 bits (105), Expect = 5e-05 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG +P +L F + G V V +IYD R RGFGF+T + V++AV Sbjct: 115 KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172 Score = 39.3 bits (90), Expect = 0.003 Identities = 25/69 (36%), Positives = 32/69 (46%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L + L F Q G V ++ DK T +SRGFGFV V V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV-GTVLA 69 Query: 40 LNGYVLDGR 14 + LDGR Sbjct: 70 SRPHTLDGR 78
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/72 (33%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V LP +L F Q G ++ V + +K TG SR +GF+ E+ A E + Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 37 NGYVLDGRALKV 2 N Y+L G L+V Sbjct: 153 NNYLLMGHLLQV 164
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 37 NGYVLDGRALKV 2 NG L+G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 41.6 bits (96), Expect = 6e-04 Identities = 23/72 (31%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NL + + L G++ V+ D+ S+G+GFV T E E A++++ Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+GR + V Sbjct: 159 NGMLLNGRKVFV 170
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/72 (33%), Positives = 33/72 (45%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++ NLPF + L LFE G V E+ YD G G V V++ + +ERL Sbjct: 353 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDS-KGAPTGIAVVEYDNVDDADVCIERL 411 Query: 37 NGYVLDGRALKV 2 N Y G L + Sbjct: 412 NNYNYGGCDLDI 423 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/72 (34%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V V NLP V L +F++ G+V +V D G S G G V+ ++++ A+E+ Sbjct: 238 VIVKNLPASVNWQALKDIFKECGNVAHADVELDG-DGVSTGSGTVSFYDIKDLHRAIEKY 296 Query: 37 NGYVLDGRALKV 2 NGY ++G L V Sbjct: 297 NGYSIEGNVLDV 308 Score = 38.1 bits (87), Expect = 0.006 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVGNL + L F Q G V ++I + G RG G V + ++V+ A+ + Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQY 195 Query: 37 NG 32 +G Sbjct: 196 DG 197
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 45.1 bits (105), Expect = 5e-05 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + +F+ NL V +L F G++ +++ D+ G+S+GFGFV +T EE +AV Sbjct: 364 VNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKAVT 422 Query: 43 RLNGYVLDGRALKV 2 +N +L G+ L V Sbjct: 423 EMNQRMLAGKPLYV 436 Score = 42.7 bits (99), Expect = 3e-04 Identities = 23/72 (31%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + L F G + +V D+L G ++G+GFV +VE A+E + Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEHV 228 Query: 37 NGYVLDGRALKV 2 NG +L+ + + V Sbjct: 229 NGMLLNDKKVYV 240 Score = 40.4 bits (93), Expect = 0.001 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ NL + + LF Q G + + ++ D+ + RGFGFV + E ++AV+ L Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDEL 321 Query: 37 NGYVLDGRALKV 2 N G+ L V Sbjct: 322 NDKEYKGKKLYV 333
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 37 NGYVLDGRALKV 2 NG L+G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 41.6 bits (96), Expect = 6e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 37 NGYVLDGRALKV 2 NG L+G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 41.6 bits (96), Expect = 6e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365
>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 266 Score = 45.1 bits (105), Expect = 5e-05 Identities = 29/72 (40%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVGNL V L LF QAG V V++ DK G+ + F FV V A+ L Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLL 70 Query: 37 NGYVLDGRALKV 2 NG L GR +K+ Sbjct: 71 NGIKLYGRPIKI 82
>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 262 Score = 45.1 bits (105), Expect = 5e-05 Identities = 29/72 (40%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVGNL V L LF QAG V V++ DK G+ + F FV V A+ L Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLL 70 Query: 37 NGYVLDGRALKV 2 NG L GR +K+ Sbjct: 71 NGIKLFGRPIKI 82
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGR---SRGFGFVTMSTVEEVEEAV 47 +F+ NL F L G+F + G+++ + K S GFGFV E+ ++A+ Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 46 ERLNGYVLDGRALKV 2 ++L G+ +DG L+V Sbjct: 784 KQLQGHTVDGHKLEV 798 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/73 (34%), Positives = 34/73 (46%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FV NL + L LF G + + D LT + +GF FVT E +A Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 460 Query: 40 LNGYVLDGRALKV 2 ++G V GR L V Sbjct: 461 VDGQVFQGRMLHV 473 Score = 34.3 bits (77), Expect = 0.090 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKL-TGRSRGFGFVTMSTVEEVEEAVE 44 ++ V N+PF ++ LF G ++ V + TG RGFGFV T ++ ++A Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 884 Query: 43 RL 38 L Sbjct: 885 AL 886
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V ++ L Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 227 Query: 37 NGYVLDGRALKV 2 + + GR +KV Sbjct: 228 DESLFRGRQIKV 239
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 44.7 bits (104), Expect = 7e-05 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 37 NGYVLDGRALKV 2 NG L+G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 41.6 bits (96), Expect = 6e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 44.7 bits (104), Expect = 7e-05 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 37 NGYVLDGRALKV 2 NG L+G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 41.6 bits (96), Expect = 6e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 44.7 bits (104), Expect = 7e-05 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV NLP+ V ++ +FE A V +V G S+G ++ T E E+A+E Sbjct: 373 LFVKNLPYRVTEDEMKNVFENALEVRLVL----NKEGSSKGMAYIEFKTEAEAEKALEEK 428 Query: 37 NGYVLDGRALKV 2 G +DGRA+ + Sbjct: 429 QGTEVDGRAMVI 440 Score = 35.8 bits (81), Expect = 0.031 Identities = 23/67 (34%), Positives = 34/67 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV L L FE GS+ ++ D+ TG S+GFGFV S+ E+ + A E + Sbjct: 555 LFVRGLSEDTTEETLRESFE--GSIS-ARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611 Query: 37 NGYVLDG 17 +DG Sbjct: 612 EDGEIDG 618
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 44.7 bits (104), Expect = 7e-05 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+VG L V L LF QAG V + D++TG+ +G+GFV + E+ + A++ + Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 37 NGYVLDGRALKV 2 N L G+ ++V Sbjct: 75 NMIKLYGKPIRV 86 Score = 39.3 bits (90), Expect = 0.003 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSV-EMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +F+GNL + L F G + + +++ D TG S+G+ F+ ++ + + A+E Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161 Query: 40 LNGYVLDGRALKV 2 +NG L R + V Sbjct: 162 MNGQYLCNRPITV 174
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V ++ L Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231 Query: 37 NGYVLDGRALKV 2 + + GR +KV Sbjct: 232 DESLFRGRQIKV 243
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V ++ L Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231 Query: 37 NGYVLDGRALKV 2 + + GR +KV Sbjct: 232 DESLFRGRQIKV 243
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 +++FVG++P ++ FEQ G+V V +I DK TG+ +G FV +T ++ + A+ Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179 Query: 43 RLNGYV 26 L+ + Sbjct: 180 ALHNQI 185 Score = 38.1 bits (87), Expect = 0.006 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG+L ++ +F Q G VE V ++ D+ +SRG GFV S+ E A++ Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDG 270 Query: 40 LNG-YVLDG 17 LNG Y + G Sbjct: 271 LNGTYTMRG 279
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/72 (30%), Positives = 41/72 (56%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V D +TGRS+G+GFV E + A+++L Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKL 196 Query: 37 NGYVLDGRALKV 2 NG +++ + + V Sbjct: 197 NGMLMNDKQVFV 208 Score = 41.6 bits (96), Expect = 6e-04 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+V NLP + +L F + G + V+ D+ +G SR FGFV E AVE++ Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289 Query: 37 NGYVLDGRALKV 2 NG L L V Sbjct: 290 NGISLGDDVLYV 301 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/72 (31%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL V +L +F + G+V +V+ + G SRGFGFV S EE A+ + Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNP-QGMSRGFGFVAYSNPEEALRALSEM 392 Query: 37 NGYVLDGRALKV 2 NG ++ + L + Sbjct: 393 NGKMIGRKPLYI 404
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 44.7 bits (104), Expect = 7e-05 Identities = 21/73 (28%), Positives = 38/73 (52%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FV NLP+ + L +F + G +E + V +D + S+GF +V + +A + Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKE 361 Query: 40 LNGYVLDGRALKV 2 L+G GR + + Sbjct: 362 LDGKHFQGRLMHI 374 Score = 38.5 bits (88), Expect = 0.005 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ + NLPF + LF G + V V K +RGFGF + E E A++ Sbjct: 703 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-KKFDRSARGFGFADFVSAREAENAMDA 761 Query: 40 LNGYVLDGRAL 8 L L GR L Sbjct: 762 LKNTHLLGRRL 772 Score = 30.4 bits (67), Expect = 1.3 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYD---KLTGR--SRGFGFVTMSTVEEVEE 53 +FV NL F + + +F+ + K G+ S GFGFV T + + Sbjct: 599 LFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQA 658 Query: 52 AVERLNGYVLDGRALKV 2 A+ ++GY LD L V Sbjct: 659 ALAAMDGYKLDQHELVV 675
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 44.7 bits (104), Expect = 7e-05 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+VGNLP + ++ LF + G V +++ K+ R G+ FV + E+A+ Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65 Query: 37 NGYVLDGRALKV 2 +GY DG L+V Sbjct: 66 DGYDFDGHRLRV 77
>RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 265 Score = 44.7 bits (104), Expect = 7e-05 Identities = 29/72 (40%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FVGNL V L LF QAG V V++ DK G+ + F FV V A+ L Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKLKQFAFVNFKHEVSVPYAMNLL 70 Query: 37 NGYVLDGRALKV 2 NG L GR +K+ Sbjct: 71 NGIKLFGRPIKI 82
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 44.3 bits (103), Expect = 9e-05 Identities = 26/72 (36%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L F Q G+ V+V+ D G+SRGFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD-HGKSRGFGFVSFERHEDAQKAVDDM 251 Query: 37 NGYVLDGRALKV 2 NG L+G+A+ V Sbjct: 252 NGKDLNGKAIFV 263 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/74 (33%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F GS+ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/72 (30%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V+ D+ S+G+GFV T E E A++++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 44.3 bits (103), Expect = 9e-05 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 4/67 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM---STVEEV-EE 53 +VF+G LP V L F + G V V ++YD+ +SRGFGF++ S+VE V E Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156 Query: 52 AVERLNG 32 LNG Sbjct: 157 RYINLNG 163 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L + L F + G + V+ + +GRSRGFGFVT + V ++ Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ- 66 Query: 40 LNG-YVLDGRAL 8 NG + LDGR + Sbjct: 67 -NGPHTLDGRTI 77
>NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) Length = 156 Score = 44.3 bits (103), Expect = 9e-05 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGNL F Q+ LF ++G ++ + + DK+ + GF FV + + E A+ + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 37 NGYVLDGRALK 5 NG LD R ++ Sbjct: 102 NGTRLDDRIIR 112
>NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1) (Cell proliferation-inducing gene 55 protein) Length = 156 Score = 44.3 bits (103), Expect = 9e-05 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGNL F Q+ LF ++G ++ + + DK+ + GF FV + + E A+ + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 37 NGYVLDGRALK 5 NG LD R ++ Sbjct: 102 NGTRLDDRIIR 112
>NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2| Length = 156 Score = 44.3 bits (103), Expect = 9e-05 Identities = 22/71 (30%), Positives = 39/71 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGNL F Q+ LF ++G ++ + + DK+ + GF FV + + E A+ + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 37 NGYVLDGRALK 5 NG LD R ++ Sbjct: 102 NGTRLDDRIIR 112
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 44.3 bits (103), Expect = 9e-05 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG L V + L L QAG V V + D++T +GFGFV E+ + A++ L Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74 Query: 37 NGYVLDGRALKV 2 N L G+ +KV Sbjct: 75 NMIKLYGKPIKV 86 Score = 42.0 bits (97), Expect = 4e-04 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMV-EVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +FVGNL V L F G + V +++ D +G S+GF F+ ++ E + A+E Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161 Query: 40 LNGYVLDGRALKV 2 +NG L RA+ V Sbjct: 162 MNGQFLCNRAITV 174
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 44.3 bits (103), Expect = 9e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++F+G L + L FE+ G++ V V+ D T RSRGFGF+T S ++ A + Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA-QN 83 Query: 40 LNGYVLDGRALK 5 + +DGR ++ Sbjct: 84 ARPHKIDGRTVE 95 Score = 35.0 bits (79), Expect = 0.053 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 ++FVG L L F+ G + V ++ DK TG+ RGF F+ + V++ + Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/58 (39%), Positives = 38/58 (65%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 VFVG + + A++ FEQ G+V+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVE 94
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 44.3 bits (103), Expect = 9e-05 Identities = 24/71 (33%), Positives = 42/71 (59%) Frame = -3 Query: 214 FVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLN 35 +VGNLPF V + +F+ S+ V ++ DK T + +GF +V V+ ++EA+ + Sbjct: 44 YVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEAL-TYD 101 Query: 34 GYVLDGRALKV 2 G +L R+L+V Sbjct: 102 GALLGDRSLRV 112
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 44.3 bits (103), Expect = 9e-05 Identities = 24/71 (33%), Positives = 42/71 (59%) Frame = -3 Query: 214 FVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLN 35 +VGNLPF V + +F+ S+ V ++ DK T + +GF +V V+ ++EA+ + Sbjct: 44 YVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEAL-TYD 101 Query: 34 GYVLDGRALKV 2 G +L R+L+V Sbjct: 102 GALLGDRSLRV 112
>NOP12_YEAST (Q08208) Nucleolar protein 12| Length = 459 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 +FVGNL F + L FE G +E V +I D T +GF +V ++ V +A+ Sbjct: 281 IFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKAL 337
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++++G L L F V V+ +K+TGRSRG+GFV + + A+ Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91 Query: 40 LNGYVLDGRALKV 2 +NG L+G + V Sbjct: 92 MNGQELNGFNISV 104
>NOP12_KLULA (Q6CKV6) Nucleolar protein 12| Length = 524 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 47 VFVGNL F V L FE G +E V +I D T +GF +V + V +A+ Sbjct: 361 VFVGNLDFEEVEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSKAL 417
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 43.9 bits (102), Expect = 1e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+L V A L +F GSV + V D +T S G+ +V + E +A+E+L Sbjct: 39 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQL 98 Query: 37 NGYVLDGRALKV 2 N + GR ++ Sbjct: 99 NYTPIKGRLCRI 110 Score = 42.0 bits (97), Expect = 4e-04 Identities = 25/74 (33%), Positives = 40/74 (54%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + +FV NL V +L F G++ +V+ + G+S+GFGFV ST EE +A+ Sbjct: 321 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKAIT 379 Query: 43 RLNGYVLDGRALKV 2 N ++ G+ L V Sbjct: 380 EKNQQIVAGKPLYV 393 Score = 40.4 bits (93), Expect = 0.001 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G + ++ D+ G+S+GFGFV +EA++ L Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDAL 185 Query: 37 NGYVLDGRALKV 2 NG +L+G+ + V Sbjct: 186 NGMLLNGQEIYV 197 Score = 35.8 bits (81), Expect = 0.031 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++V N+ Q LF + G + + D G+ +GFGFV E+ +AVE L Sbjct: 220 LYVKNINSETTDEQFQELFAKFGPIVSASLEKDA-DGKLKGFGFVNYEKHEDAVKAVEAL 278 Query: 37 NGYVLDGRALKV 2 N L+G L V Sbjct: 279 NDSELNGEKLYV 290
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/71 (28%), Positives = 37/71 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++G++P ++ QL F Q G+V + + K TG S+G+ +V E + + + Sbjct: 43 IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTM 102 Query: 37 NGYVLDGRALK 5 N Y+ R LK Sbjct: 103 NNYLFCERLLK 113
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + L F G++ +V D + GRS+G+GFV E + A+++L Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKL 192 Query: 37 NGYVLDGRALKV 2 NG +L+ + + V Sbjct: 193 NGMLLNDKQVFV 204 Score = 42.7 bits (99), Expect = 3e-04 Identities = 26/72 (36%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+V NLP + +L F + G + V+ D+ +G SR FGFV + E AVE++ Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 285 Query: 37 NGYVLDGRALKV 2 NG L L V Sbjct: 286 NGISLGEDVLYV 297 Score = 39.7 bits (91), Expect = 0.002 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++ NL V +L +F + G+V +V+ + G SRGFGFV S EE A++ + Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEALLAMKEM 388 Query: 37 NGYVLDGRALKV 2 NG ++ + L V Sbjct: 389 NGKMIGRKPLYV 400
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 44 ++FVG L + L F + G V + D TGRSRGFGF+ VE+ ++ Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128 Query: 43 ---RLNGYVLD 20 RL+G V+D Sbjct: 129 KEHRLDGRVID 139 Score = 35.8 bits (81), Expect = 0.031 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 220 RVFVGNL-PFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L P ++ F + G +E +E+ D + RGF F+T E V++ +E Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 212 Query: 43 R 41 + Sbjct: 213 K 213
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++GNL + + +F + G V + D+ TG S+GF ++ AV+ L Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNL 92 Query: 37 NGYVLDGRALKV 2 NG+ + GRALK+ Sbjct: 93 NGFKIGGRALKI 104
>DAZ1_CAEEL (Q20870) DAZ protein 1| Length = 499 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/73 (32%), Positives = 43/73 (58%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FVG P +L FE+ +V+ V+++ L G+S+G+GF+T T ++ EE + + Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEE-IRK 125 Query: 40 LNGYVLDGRALKV 2 L L+ R+ K+ Sbjct: 126 LTPKQLEFRSRKL 138
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQA-GSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 +FVG+L + L F S ++I D +TG SR +GFV S+ +E + A+ Sbjct: 184 IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMH 243 Query: 40 LNGYVLDGRALKV 2 + GY+ GR L++ Sbjct: 244 MQGYLCQGRPLRI 256
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 43.1 bits (100), Expect = 2e-04 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 53 ++FVG L + +L F + G +E + V D TGRSRGF F+ + E +++ Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112 Score = 36.2 bits (82), Expect = 0.024 Identities = 16/59 (27%), Positives = 33/59 (55%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 ++FVG L + ++ F Q G++ VE+ +DK + +GF F+T + + V + ++ Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 43.1 bits (100), Expect = 2e-04 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 44 ++FVG L + L F + G V + D TGRSRGFGF+ VE+ ++ Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135 Query: 43 ---RLNGYVLD 20 RL+G V+D Sbjct: 136 KEHRLDGRVID 146 Score = 37.0 bits (84), Expect = 0.014 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++FVG L ++ F Q G +E +E+ D + RGF F+T + V++ +E+ Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK 219
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/72 (25%), Positives = 39/72 (54%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV + + ++L FE G ++ + ++Y+K +G+ RG+ F+ ++ A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 37 NGYVLDGRALKV 2 +G +DGR + V Sbjct: 165 DGKKIDGRRVLV 176
>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)| (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) Length = 256 Score = 42.7 bits (99), Expect = 3e-04 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ V NL F V A + LF + G+++ V YD+ +GRS G V + +A+++ Sbjct: 106 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 164 Query: 40 LNGYVLDGRALKV 2 NG LDGR + + Sbjct: 165 YNGVPLDGRPMNI 177
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 42.7 bits (99), Expect = 3e-04 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +++G++P + QL F Q G+V + + K TG S+G+ +V E + + + Sbjct: 43 IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTM 102 Query: 37 NGYVLDGRALK 5 N Y+ R LK Sbjct: 103 NNYLFCERLLK 113
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 42.7 bits (99), Expect = 3e-04 Identities = 18/72 (25%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV + + ++L FE G ++ + ++Y K +G+ RG+ F+ ++ A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 37 NGYVLDGRALKV 2 +G +DGR + V Sbjct: 165 DGKKIDGRRVLV 176
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 42.7 bits (99), Expect = 3e-04 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ V NL F V A + LF + G+++ V YD+ +GRS G V + +A+++ Sbjct: 105 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 163 Query: 40 LNGYVLDGRALKV 2 NG LDGR + + Sbjct: 164 YNGVPLDGRPMNI 176
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 42.7 bits (99), Expect = 3e-04 Identities = 22/58 (37%), Positives = 37/58 (63%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 VFVG + + ++ G F + GSV+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 42 VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 42.7 bits (99), Expect = 3e-04 Identities = 18/72 (25%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV + + ++L FE G ++ + ++Y K +G+ RG+ F+ ++ A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 37 NGYVLDGRALKV 2 +G +DGR + V Sbjct: 165 DGKKIDGRRVLV 176
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 42.7 bits (99), Expect = 3e-04 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 +FVGNL F A L F Q G + V ++ + TG+ +GFGFV ++ +A+E Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/73 (30%), Positives = 33/73 (45%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ N+ + LF G +E V V D TG+S+GF +V E A Sbjct: 302 RLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIE 361 Query: 40 LNGYVLDGRALKV 2 L+ + GR L + Sbjct: 362 LDKQIFQGRLLHI 374 Score = 40.4 bits (93), Expect = 0.001 Identities = 25/71 (35%), Positives = 34/71 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ V NLPF + LF G ++ V V K +RGF FV E E A+++ Sbjct: 713 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVP-KKFDKSARGFAFVEFLLPSEAENAMDQ 771 Query: 40 LNGYVLDGRAL 8 L G L GR L Sbjct: 772 LQGVHLLGRRL 782 Score = 36.2 bits (82), Expect = 0.024 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIY-------DKLTGRSRGFGFVTMSTVEEV 59 +FV NL F SAQL F+ + +V DK S GFGF+ T E+ Sbjct: 614 IFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKL--SMGFGFIEFRTKEQA 671 Query: 58 EEAVERLNGYVLDGRALKV 2 + ++G V+DG +++ Sbjct: 672 GAVIAAMDGAVIDGHKIQL 690 Score = 33.9 bits (76), Expect = 0.12 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLF----EQAG-----SVEMVEVIYDKLTGRSRGFGFVTMSTV 68 RV V LP + A+L F +Q G + V+++ DK +G SR F F+ + Sbjct: 3 RVIVKGLPIYLEEARLRAHFLKRLQQQGRGSEDQITDVKIVKDK-SGNSRRFAFIGYRSE 61 Query: 67 EEVEEAVERLNGYVLDGRALKV 2 ++ +A+E NG +D ++V Sbjct: 62 QDAFDAIEYFNGSFIDTARIEV 83
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FVG + A L +F G+V+ ++I D+ G S+G+GFVT T +E + Sbjct: 34 RIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQRLQAD 92 Query: 40 LNGYVLDGRALKV 2 VL R L + Sbjct: 93 GECVVLRDRKLNI 105
>YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 intergenic| region Length = 659 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+GNL V L +F++ S E +V D LT +S G+G++ + E A + Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEF 172 Query: 37 NGYVLDGRALKV 2 N V G+ +K+ Sbjct: 173 NYTVFFGQEVKI 184
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 42.4 bits (98), Expect = 3e-04 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+V N +L FE G + +V+ K G+S+GFGFV T E E AV+ L Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 37 NGYVL-DGRALKV 2 NG + +G++L V Sbjct: 244 NGKDMGEGKSLYV 256 Score = 41.6 bits (96), Expect = 6e-04 Identities = 25/74 (33%), Positives = 39/74 (52%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ D+ GRS+GFGFV + E AV Sbjct: 287 VNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATCAVT 345 Query: 43 RLNGYVLDGRALKV 2 LNG V+ + L V Sbjct: 346 ELNGRVVGSKPLYV 359 Score = 41.6 bits (96), Expect = 6e-04 Identities = 21/72 (29%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VF+ NL + + + F G++ +V D+ G S+G+GFV T E +++++ Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDKV 150 Query: 37 NGYVLDGRALKV 2 NG +L+G+ + V Sbjct: 151 NGMLLNGKKVYV 162 Score = 40.0 bits (92), Expect = 0.002 Identities = 20/72 (27%), Positives = 38/72 (52%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VG+LP V + L F AG V + V D +T RS G+ +V + E A++ + Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTM 63 Query: 37 NGYVLDGRALKV 2 N ++ + +++ Sbjct: 64 NFDLVRNKPIRI 75
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ N+ + LF G ++ V V D TG S+GF +V + EE +A Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIE 385 Query: 40 LNGYVLDGRALKV 2 L+ + GR L + Sbjct: 386 LDKQIFQGRLLHI 398 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ V NLPF + LF G ++ V V K +RGF FV +E E A+++ Sbjct: 739 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFVLPKEAENAMDQ 797 Query: 40 LNGYVLDGRAL 8 L G L GR L Sbjct: 798 LQGVHLLGRRL 808 Score = 35.8 bits (81), Expect = 0.031 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIY-----DKLTGRSRGFGFVTMSTVEEVEE 53 +F+ NL F S QL F+ + +V K S GFGFV T E+ Sbjct: 642 IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQATA 701 Query: 52 AVERLNGYVLDGRALKV 2 + ++G V+DG +++ Sbjct: 702 VISAMDGTVIDGHKIQL 718
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/72 (30%), Positives = 40/72 (55%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ NL + + L F G++ +V+ D+ S+G+GFV T E E A++++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158 Query: 37 NGYVLDGRALKV 2 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/72 (30%), Positives = 43/72 (59%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V++ N + +L +F + G V+V+ D G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 37 NGYVLDGRALKV 2 NG ++G+++ V Sbjct: 252 NGKDMNGKSMFV 263 Score = 40.4 bits (93), Expect = 0.001 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 + ++V NL + +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 43 RLNGYVLDGRALKV 2 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365
>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2| Length = 218 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/72 (31%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGNL F QL LF + GS+E + + D+ GF F+ T +E A++ L Sbjct: 48 IYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYL 107 Query: 37 NGYVLDGRALKV 2 + LD R + + Sbjct: 108 SKTKLDDREITI 119
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/70 (34%), Positives = 36/70 (51%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NLP + +L LF + G V + + DK+TG +GF FVT + ++ A+ LN Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239 Query: 31 YVLDGRALKV 2 + LKV Sbjct: 240 IRMYHMVLKV 249
>NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 kDa nuclear cap| binding protein) (NCBP 20 kDa subunit) (CBP20) (Fragment) Length = 148 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/71 (32%), Positives = 38/71 (53%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 ++VGNL F Q+ LF ++G V+ + + DK+ + GF FV T + A+ + Sbjct: 34 LYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKVKKTACGFCFVEYYTRADAGTAMRFI 93 Query: 37 NGYVLDGRALK 5 NG LD R ++ Sbjct: 94 NGTRLDDRIVR 104
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 42.0 bits (97), Expect = 4e-04 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = -3 Query: 166 LFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 LF + G +E ++++ D T RSRGF F+ + + A + +G +DGR ++V Sbjct: 116 LFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRV 170
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 42.0 bits (97), Expect = 4e-04 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ N+ + LF G +E V + D TG+S+GF +V + A Sbjct: 331 RLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVE 390 Query: 40 LNGYVLDGRALKV 2 L+ + GR L + Sbjct: 391 LDKQIFQGRLLHI 403 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ V NLPF + LF G ++ V V K +RGF FV +E E A+++ Sbjct: 753 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVP-KKFDKSARGFAFVEFLLPKEAENAMDQ 811 Query: 40 LNGYVLDGRAL 8 L G L GR L Sbjct: 812 LQGVHLLGRRL 822 Score = 37.0 bits (84), Expect = 0.014 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYD---KLTGR--SRGFGFVTMSTVEEVEE 53 +F+ NL F S QL F+ + +V K G+ S GFGF T E+ Sbjct: 653 IFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQANA 712 Query: 52 AVERLNGYVLDGRALKV 2 + + G +LDG L++ Sbjct: 713 VISAMEGTILDGHKLQL 729
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 42.0 bits (97), Expect = 4e-04 Identities = 25/70 (35%), Positives = 38/70 (54%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 VGNL F + L F + V + ++ D LT RSRGFG+V T + + A+ L+G Sbjct: 98 VGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRGFGYVEFETADTLSAAL-ALSG 154 Query: 31 YVLDGRALKV 2 L GR +++ Sbjct: 155 EDLMGRPVRI 164
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 41.6 bits (96), Expect = 6e-04 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 + V LP + +L LF G + ++ D TG S G+GFV + + A+ L Sbjct: 80 LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNL 139 Query: 37 NGYVLDGRALKV 2 NG + + +KV Sbjct: 140 NGITVRNKRIKV 151
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 41.6 bits (96), Expect = 6e-04 Identities = 25/71 (35%), Positives = 34/71 (47%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ + NLPF + LF GS++ V V K SRGF F + +E E A+ Sbjct: 704 KILIKNLPFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAMSA 762 Query: 40 LNGYVLDGRAL 8 L G L GR L Sbjct: 763 LQGTHLLGRRL 773 Score = 39.7 bits (91), Expect = 0.002 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQ-----AGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 53 VFV NL F S L F+ V+M +K S GFGFV S+ E E Sbjct: 607 VFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEAAEI 666 Query: 52 AVERLNGYVLDGRALKV 2 A + ++G+VLDG L++ Sbjct: 667 AQKAMDGHVLDGHKLQL 683 Score = 39.7 bits (91), Expect = 0.002 Identities = 22/73 (30%), Positives = 33/73 (45%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ NL + LF Q G +E V + + TG+ +GF V E A E Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361 Query: 40 LNGYVLDGRALKV 2 +G + GR L + Sbjct: 362 QDGKIFQGRLLHI 374
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 41.2 bits (95), Expect = 7e-04 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ +LP L +F G+V +V DK T S+ FGFV+ + A++ + Sbjct: 403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 462 Query: 37 NGYVLDGRALKV 2 NG+ + + LKV Sbjct: 463 NGFQIGMKRLKV 474 Score = 33.9 bits (76), Expect = 0.12 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTG--RSRGFGFVTMSTVEEVEEA 50 +++FVG +P L LFEQ G+V + ++ D+ +S+G FVT T + EA Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEA 75 Query: 49 VERL-NGYVLDG 17 L N VL G Sbjct: 76 QNALHNMKVLPG 87
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 41.2 bits (95), Expect = 7e-04 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +F+ +LP L +F G+V +V DK T S+ FGFV+ + A++ + Sbjct: 403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 462 Query: 37 NGYVLDGRALKV 2 NG+ + + LKV Sbjct: 463 NGFQIGMKRLKV 474 Score = 34.3 bits (77), Expect = 0.090 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTG--RSRGFGFVTMSTVEEVEEA 50 +++FVG +P L LFEQ G+V + V+ D+ +S+G FVT T + EA Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75 Query: 49 VERL-NGYVLDG 17 L N VL G Sbjct: 76 QNALHNMKVLPG 87
>NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 476 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/73 (35%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E A Sbjct: 80 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVE 133 Query: 40 LNGYVLDGRALKV 2 L+ L G+ L+V Sbjct: 134 LDNMPLRGKQLRV 146
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 41.2 bits (95), Expect = 7e-04 Identities = 14/45 (31%), Positives = 29/45 (64%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 83 +F+G LP+ + +L F + G +E + ++ DK+T +S+G+ F+ Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFI 153
>NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 473 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/73 (35%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E A Sbjct: 77 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVE 130 Query: 40 LNGYVLDGRALKV 2 L+ L G+ L+V Sbjct: 131 LDNMPLRGKQLRV 143
>NOP12_SCHPO (O13741) Nucleolar protein 12| Length = 438 Score = 41.2 bits (95), Expect = 7e-04 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 VFVGNL F L F GS++ V ++ D T +GF ++ V++A+ Sbjct: 272 VFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALLLN 331 Query: 37 NGYVLDGRALKV 2 + +GR L++ Sbjct: 332 EKKMPEGRTLRI 343
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 41.2 bits (95), Expect = 7e-04 Identities = 19/70 (27%), Positives = 40/70 (57%) Frame = -3 Query: 211 VGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 32 V NL + L +FE+A S+ + + GR++GF F+ S+ E+ ++A++ N Sbjct: 418 VNNLSYSATEDSLREVFEKATSIRIPQN-----QGRAKGFAFIEFSSAEDAKDAMDSCNN 472 Query: 31 YVLDGRALKV 2 ++GR++++ Sbjct: 473 TEIEGRSIRL 482 Score = 37.7 bits (86), Expect = 0.008 Identities = 24/67 (35%), Positives = 34/67 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV L L F+ GSV ++ D+ TG S+GFGFV ST E+ + A E + Sbjct: 504 LFVRGLSEDTTEETLKEAFD--GSVN-ARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAM 560 Query: 37 NGYVLDG 17 +DG Sbjct: 561 EDGEIDG 567 Score = 37.0 bits (84), Expect = 0.014 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 +FV N+P+ +L +FE A + I G ++G +V S +E +A+E Sbjct: 326 LFVKNIPYSTTVEELQEIFENAKDIR----IPTGKDGSNKGIAYVEFSNEDEANKALEEK 381 Query: 37 NGYVLDGRALKV 2 G ++GR++ V Sbjct: 382 QGAEIEGRSIFV 393 Score = 33.5 bits (75), Expect = 0.15 Identities = 24/74 (32%), Positives = 39/74 (52%) Frame = -3 Query: 223 LRVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 44 L +F+GNL +L + S + + I D G S+ FG+V S+ EEVE+A+ Sbjct: 232 LSIFIGNLNSTKEFDELKDALREFFSKKNL-TIQDIRIGNSKKFGYVDFSSEEEVEKAL- 289 Query: 43 RLNGYVLDGRALKV 2 +L G + G +K+ Sbjct: 290 KLTGKKILGTEVKI 303
>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 471 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/73 (35%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E A Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVE 128 Query: 40 LNGYVLDGRALKV 2 L+ L G+ L+V Sbjct: 129 LDNMPLRGKQLRV 141
>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO| protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit) Length = 471 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/73 (35%), Positives = 37/73 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E A Sbjct: 75 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAEIAKVE 128 Query: 40 LNGYVLDGRALKV 2 L+ L G+ L+V Sbjct: 129 LDNMPLRGKQLRV 141
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 41.2 bits (95), Expect = 7e-04 Identities = 21/71 (29%), Positives = 35/71 (49%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 38 V+V +LP + Q+ F Q G+V + K TG S+G+ FV + + + E + Sbjct: 47 VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 106 Query: 37 NGYVLDGRALK 5 N Y+ R L+ Sbjct: 107 NNYLFGERLLE 117
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 41.2 bits (95), Expect = 7e-04 Identities = 25/71 (35%), Positives = 36/71 (50%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 ++ V NLPF + LF G ++ V V K +RGF FV +E E A+++ Sbjct: 764 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFLLPKEAENAMDQ 822 Query: 40 LNGYVLDGRAL 8 L+G L GR L Sbjct: 823 LHGVHLLGRRL 833 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/73 (28%), Positives = 33/73 (45%) Frame = -3 Query: 220 RVFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 41 R+F+ N+ + LF G +E V V D TG+S+GF +V + A Sbjct: 346 RLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVE 405 Query: 40 LNGYVLDGRALKV 2 L+ + GR L + Sbjct: 406 LDKQIFQGRLLHI 418 Score = 32.7 bits (73), Expect = 0.26 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Frame = -3 Query: 217 VFVGNLPFXVVSAQLXGLFEQAGSVEMVEVIYD---KLTGR--SRGFGFVTMSTVEEVEE 53 +F+ NL F + L F+ + +V K G+ S GFGFV T E+ Sbjct: 665 IFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANA 724 Query: 52 AVERLNGYVLDGRALKV 2 + ++G V+DG +++ Sbjct: 725 VIAAMDGTVIDGHKIQL 741 Score = 29.3 bits (64), Expect = 2.9 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3 Query: 136 VEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKV 2 V+++ D+ G SR FGF+ E+ +AVE NG ++ ++V Sbjct: 46 VKILRDR-NGESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEV 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,194,517 Number of Sequences: 219361 Number of extensions: 411889 Number of successful extensions: 2015 Number of sequences better than 10.0: 396 Number of HSP's better than 10.0 without gapping: 1675 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1949 length of database: 80,573,946 effective HSP length: 50 effective length of database: 69,605,896 effective search space used: 1670541504 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
