ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6h04 |
|---|---|
| Clone Library Name | barley_pub |
>JPH2_HUMAN (Q9BR39) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 696 Score = 36.6 bits (83), Expect = 0.068 Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +2 Query: 464 RPERRDGLVLPDDSASPTR-GSVTPAPRRREGEATLEATTFLVAAANAPPSGGAQQRCTL 640 R E +G V PD ASP G P+P G L AAA AP GG QR L Sbjct: 167 RSEHSNGTVAPDSPASPASDGPALPSPAIPRGGFALSLLANAEAAARAPKGGGLFQRGAL 226
>CSPG5_CHICK (Q9DF69) Chondroitin sulfate proteoglycan 5 precursor (Acidic| leucine-rich EGF-like domain-containing brain protein) [Contains: Chondroitin sulfate proteoglycan 5, 38 kDa form; Chondroitin sulfate proteoglycan 5, 80 kDa form] Length = 594 Score = 34.7 bits (78), Expect = 0.26 Identities = 26/77 (33%), Positives = 30/77 (38%) Frame = -1 Query: 569 RAWLRLLDAGVPVSRTRAWETRCRPGGQGHPVALDDDAASSGCCRVTAGRSVGAVPRLMA 390 RAW L +G P++ T + P G G P D GC A SV VP A Sbjct: 31 RAWGGPLQSGAPINSTDPLGPQLEPPG-GGPATADPTVGCMGCSGEGAASSVPPVPD--A 87 Query: 389 LDDDRLTRASQCDEDSG 339 D RL D D G Sbjct: 88 AQDPRLGVTGPTDGDGG 104
>MAUG_METME (Q50233) Methylamine utilization protein mauG precursor| Length = 335 Score = 33.5 bits (75), Expect = 0.58 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%) Frame = +1 Query: 262 NTISGGDLQPRRRLARPEHSGGALHRPESSSHC--------DARVSRSSSKAISLGTAPT 417 NT +L PR + RP+ L P + D R+SRS A + +P Sbjct: 17 NTAWSANLPPREKFKRPDSIPAPLSNPLTLEKATLGKTLFFDQRLSRSGGMACATCHSPD 76 Query: 418 ERPAVTRQQPLEAASSSRATGWP 486 +R + R PL+A S S A P Sbjct: 77 QRWSDGRTLPLQAESVSNARRTP 99
>ACM5_HUMAN (P08912) Muscarinic acetylcholine receptor M5| Length = 532 Score = 33.1 bits (74), Expect = 0.76 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = +1 Query: 70 VSQRQETKGF---PSHLETKRQRVTLVRRRNPDETTPAIHISVDLQHWSRY 213 V++ TKG PSH TKR+RV LV+ R +T AI ++ + W+ Y Sbjct: 409 VAKEPSTKGLNPNPSHQMTKRKRVVLVKERKAAQTLSAILLAFIIT-WTPY 458
>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1305 Score = 32.7 bits (73), Expect = 0.99 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = +1 Query: 271 SGGDLQPRRRLARPEHSGGALH-RPESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQP 447 SG LQ RL RP S A P + C++ S SSS + S ++ +E A P Sbjct: 669 SGAGLQRLHRLRRPHSSSDAFPVGPAPAGSCESLSSSSSSSSSSSSSSSSESSA-GGLGP 727 Query: 448 LEAASSSRATGW 483 L + S R + W Sbjct: 728 LSGSPSHRTSAW 739
>ACM5_MACMU (P56490) Muscarinic acetylcholine receptor M5| Length = 532 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = +1 Query: 70 VSQRQETKGF---PSHLETKRQRVTLVRRRNPDETTPAIHISVDLQHWSRY 213 V++ TKG PSH TKR+R+ LV+ R +T AI ++ + W+ Y Sbjct: 409 VAKEPSTKGLNPNPSHQMTKRKRMVLVKERKAAQTLSAILLAFIIT-WTPY 458
>Y1626_PYRHO (O59292) UPF0103 protein PH1626| Length = 291 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Frame = -1 Query: 650 HQGSAYSVVVLRRMEERLPLPPGRWSLRAWLRLLDAGVPVSRTRAWE---TRCRPGGQG 483 H GS Y V R E LP W +R R+LD + + E T C PGG G Sbjct: 191 HYGSFYGYVPFRGRPEELPNMVRDWDMRIIRRILDFDLDGMFSEIREMNHTMCGPGGVG 249
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 8/65 (12%) Frame = +2 Query: 377 GHRPRPSA*GRLPRSDQP*RGNNHLKQR----RRPERRDGLVLPDDSASP----TRGSVT 532 G RPR GR + D+P R ++R R E + L LP + P T +V Sbjct: 1237 GERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVA 1296 Query: 533 PAPRR 547 PAPRR Sbjct: 1297 PAPRR 1301
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 31.2 bits (69), Expect = 2.9 Identities = 34/90 (37%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Frame = +2 Query: 305 RARS-TPAALSIGPNPRRTATRESAGHRPR----PSA*GRLP--RSDQP*RGNNHLKQRR 463 RARS TP+ S P R S G R PS R P RS P R + +R Sbjct: 1919 RARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRS 1978 Query: 464 R-PERRDGLVLPDDSASPTRGSVTPAPRRR 550 R P RR S +P+R S TP+ RRR Sbjct: 1979 RTPSRR--------SRTPSRRSRTPSRRRR 2000
>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta| chain 3) (Beta-IV spectrin) Length = 2564 Score = 31.2 bits (69), Expect = 2.9 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = +2 Query: 296 DA*RARSTPAALS-IGPNPRRTATRESAGHRPRPSA*GRLPRSDQP*RGNNHLKQRRRPE 472 DA +TPAA + P P R + + A PR R DQ + +RRRPE Sbjct: 2213 DAAETPATPAAAEQVRPRPERQESADRAEELPRRRRPERQESVDQ----SEEAARRRRPE 2268 Query: 473 RRDGLVLPDDSASPTRGSVTPAPRRRE 553 R++ + + S T G RRRE Sbjct: 2269 RQES-AEHEAAHSLTLGRYEQMERRRE 2294
>CFAH_HUMAN (P08603) Complement factor H precursor (H factor 1)| Length = 1231 Score = 30.8 bits (68), Expect = 3.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 341 GRWRAPPECSGRARRRLGCKSPP 273 G+W +PP+C G L CKSPP Sbjct: 918 GKWSSPPQCEG-----LPCKSPP 935
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 30.8 bits (68), Expect = 3.7 Identities = 30/118 (25%), Positives = 37/118 (31%) Frame = +2 Query: 266 PLAEATYNRGDA*RARSTPAALSIGPNPRRTATRESAGHRPRPSA*GRLPRSDQP*RGNN 445 P A A +A R TP G +R G RP P + PR + Sbjct: 127 PEAPAAKAAPEAPAQRPTPGGPRPGQQQQRPGAPAQGGPRPGPKPGPKTPRVGNNPYSSQ 186 Query: 446 HLKQRRRPERRDGLVLPDDSASPTRGSVTPAPRRREGEATLEATTFLVAAANAPPSGG 619 +R RP R G P P +G P P + AA P GG Sbjct: 187 PAPERERPAARPGPGGP--RPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGPRPGG 242
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 30.8 bits (68), Expect = 3.7 Identities = 45/154 (29%), Positives = 56/154 (36%), Gaps = 9/154 (5%) Frame = +2 Query: 200 TGVDIYRWARQIKKP---VSNKI*TPLAEATYNRGDA*RARSTPAALSIGPNPRRTATRE 370 TG + R + + + P V K PLA R A RA AA S+ P PR A+ Sbjct: 187 TGPRLSRSSSETRSPGGTVQPKSPAPLAA----RCSASRAGCPTAAGSLLPAPRPPASSA 242 Query: 371 SAGHRPRPSA*G--RLPRSDQP*RGNNHLKQRRRPERRDGLVLPDDSASPTRGSVTPAPR 544 S+ P+A RLPR P RP R A P + P PR Sbjct: 243 SSPQAAAPAAPSATRLPRRTTP--------SAPRPSSR--------PARPPIPAARPPPR 286 Query: 545 RREGEATLEATTFLVAAANAP----PSGGAQQRC 634 R G A A +P PS +RC Sbjct: 287 RTPGTPRPAAARARAPAGCSPARRTPSAPTDRRC 320
>NPCL1_HUMAN (Q9UHC9) Niemann-Pick C1-like protein 1 precursor| Length = 1359 Score = 30.4 bits (67), Expect = 4.9 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = -2 Query: 187 RRCGSPELFHLDSVAGRASHAAVLSPDARESPWFLAAVTPPPCVAKNAL 41 RR G P H+ GR + + +L + +FL A+TP P V AL Sbjct: 726 RRPGEPREVHIGRALGRVAPSMLLCSLSEAICFFLGALTPMPAVRTFAL 774
>GBRAL_DROME (Q24352) Gamma-aminobutyric-acid receptor alpha-like precursor| (GABA(A) receptor alpha-like and glycine receptor-like subunit of Drosophila) (GRD) Length = 686 Score = 30.4 bits (67), Expect = 4.9 Identities = 28/101 (27%), Positives = 39/101 (38%) Frame = +2 Query: 326 ALSIGPNPRRTATRESAGHRPRPSA*GRLPRSDQP*RGNNHLKQRRRPERRDGLVLPDDS 505 A+S+ P P R S RPR G G ++RR+P R D DD Sbjct: 527 AISMPPPPTRLGMLTSRNRRPRNRRHGLW---SMKLLGLFDWRRRRKPPRADSDEDEDDE 583 Query: 506 ASPTRGSVTPAPRRREGEATLEATTFLVAAANAPPSGGAQQ 628 + R + P A A AA +PP+GG ++ Sbjct: 584 QTQLRANEAPT----TSAAAAAAQAAAQAARISPPTGGRRR 620
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 30.4 bits (67), Expect = 4.9 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = -1 Query: 497 PGGQGHPVALDDDAA-SSGCCRVTAGRSVGAVPRLMAL 387 PGG P A A S+GCC + GR+ + PRL+ L Sbjct: 16 PGGPAAPAATGRAALPSAGCCPLPPGRNSSSRPRLLLL 53
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 30.4 bits (67), Expect = 4.9 Identities = 48/176 (27%), Positives = 66/176 (37%), Gaps = 7/176 (3%) Frame = +2 Query: 56 HTGRRCHSGKKPRAFPRIWRQNG--SV*RSSGDGIQMKQLRRSTSPSIFNTGVDIYRWAR 229 H R+ S + RA R + S RS + ++ RS S S V + R Sbjct: 1819 HKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1878 Query: 230 QIKKPVSNKI*TPLAEATYNRGDA*RARS-TPAALSIGPNPRRTATRESAGHRPR----P 394 K ++ ++ + A RARS TP+ S P R S G R P Sbjct: 1879 SPKHRSKSRERKRKRSSSRDNRKAARARSRTPSRRSRSHTPSRRRRSISVGRRRSFSISP 1938 Query: 395 SA*GRLPRSDQP*RGNNHLKQRRRPERRDGLVLPDDSASPTRGSVTPAPRRREGEA 562 S R P R ++ R P RR S +P+R S TP+ RRR A Sbjct: 1939 SRRSRTPSR----RSRTPSRRSRTPSRR--------SRTPSRRSRTPSRRRRSRSA 1982
>Y539_PYRAB (Q9V189) UPF0103 protein PYRAB05390| Length = 291 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = -1 Query: 650 HQGSAYSVVVLRRMEERLPLPPGRWSLRAWLRLLD---AGVPVSRTRAWETRCRPGGQG 483 H GS Y V R LP W +R R+LD G+ T C PGG G Sbjct: 191 HYGSFYGYVPFRGRANELPNMVKEWDMRIIRRILDFDLKGMFEEIREMDHTMCGPGGVG 249
>KLF1_HUMAN (Q13351) Krueppel-like factor 1 (Erythroid krueppel-like| transcription factor) (EKLF) (Erythroid transcription factor) Length = 362 Score = 30.0 bits (66), Expect = 6.4 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 5/78 (6%) Frame = +2 Query: 440 NNHLKQRRRPERRD-GLVLPDDSASPTRGSVTPAPRRREG-EATLEAT---TFLVAAANA 604 ++ LK R E +D G PD + P P E E +AT L+ + Sbjct: 25 DDFLKWWRSEEAQDMGPGPPDPTEPPLHVKSEDQPGEEEDDERGADATWDLDLLLTNFSG 84 Query: 605 PPSGGAQQRCTLTPGEAS 658 P GGA Q C L P EAS Sbjct: 85 PEPGGAPQTCALAPSEAS 102
>FBX42_PONPY (Q5RDA9) F-box only protein 42| Length = 717 Score = 30.0 bits (66), Expect = 6.4 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Frame = +2 Query: 458 RRRPERRDGLVLPDDSASPTRGSVTPAPRRREGEA--TLEATTFLVAAANAPPSG---GA 622 R PE+ +G+ P AS G+V+P RR EA + + +AA +PP G G+ Sbjct: 528 RHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPGS 587 Query: 623 QQRCTLTPGE 652 +L+ GE Sbjct: 588 PGSQSLSSGE 597
>FBX42_MOUSE (Q6PDJ6) F-box only protein 42| Length = 717 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +2 Query: 458 RRRPERRDGLVLPDDSASPTRGSVTPAPRRREGEA--TLEATTFLVAAANAPPSGGAQQR 631 R PE+ +G+ P AS G+V+P RR EA + + +AA +PP G + Sbjct: 528 RHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPS- 586 Query: 632 CTLTPGEAS 658 +PG S Sbjct: 587 ---SPGSQS 592
>FBX42_HUMAN (Q6P3S6) F-box only protein 42| Length = 717 Score = 30.0 bits (66), Expect = 6.4 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Frame = +2 Query: 458 RRRPERRDGLVLPDDSASPTRGSVTPAPRRREGEA--TLEATTFLVAAANAPPSG---GA 622 R PE+ +G+ P AS G+V+P RR EA + + +AA +PP G G+ Sbjct: 528 RHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPGS 587 Query: 623 QQRCTLTPGE 652 +L+ GE Sbjct: 588 PGSQSLSSGE 597
>Y1638_PYRFU (Q8U0F2) UPF0103 protein PF1638| Length = 292 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = -1 Query: 650 HQGSAYSVVVLRRMEERLPLPPGRWSLRAWLRLLD---AGVPVSRTRAWETRCRPGGQG 483 H G Y V R + LP W +R R+LD G+ T C PGG G Sbjct: 191 HYGEFYGYVPFRARADELPNLVKEWDMRVIRRILDFDVEGMFEEINAMNHTMCGPGGVG 249
>ZN265_RAT (O35986) Zinc finger protein 265 (Zinc finger, splicing)| Length = 332 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = +1 Query: 295 RRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTAPTERPAVTRQQPLEAASSSRA 474 R +R HS + SS SRS S + S + + +R + ++ SSSR+ Sbjct: 203 RSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSHSGSREHSRSRGSKSRSSSRS 262 Query: 475 TGWPCPPGRQ--RVSHARVRDTG 537 TG P + RV H +++TG Sbjct: 263 TGALLPQEKDLTRVLHHLLKETG 285
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/104 (23%), Positives = 44/104 (42%) Frame = +1 Query: 232 NKETGVK*DMNTISGGDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTA 411 +K+ G + + G + R+R + S R S+S + S SS S +A Sbjct: 43 SKDKGTTKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA 102 Query: 412 PTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARVRDTGTP 543 + + + + ++SSS ++G P P R+ + R R P Sbjct: 103 SSRSGSSSTSR---SSSSSSSSGSPSPSRRRHDNRRRSRSKSKP 143
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/104 (23%), Positives = 44/104 (42%) Frame = +1 Query: 232 NKETGVK*DMNTISGGDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTA 411 +K+ G + + G + R+R + S R S+S + S SS S +A Sbjct: 43 SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA 102 Query: 412 PTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARVRDTGTP 543 + + + + ++SSS ++G P P R+ + R R P Sbjct: 103 SSRSGSSSTSR---SSSSSSSSGSPSPSRRRHDNRRRSRSKSKP 143
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/104 (23%), Positives = 44/104 (42%) Frame = +1 Query: 232 NKETGVK*DMNTISGGDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTA 411 +K+ G + + G + R+R + S R S+S + S SS S +A Sbjct: 43 SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA 102 Query: 412 PTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARVRDTGTP 543 + + + + ++SSS ++G P P R+ + R R P Sbjct: 103 SSRSGSSSTSR---SSSSSSSSGSPSPSRRRHDNRRRSRSKSKP 143
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/104 (23%), Positives = 44/104 (42%) Frame = +1 Query: 232 NKETGVK*DMNTISGGDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTA 411 +K+ G + + G + R+R + S R S+S + S SS S +A Sbjct: 43 SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA 102 Query: 412 PTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARVRDTGTP 543 + + + + ++SSS ++G P P R+ + R R P Sbjct: 103 SSRSGSSSTSR---SSSSSSSSGSPSPSRRRHDNRRRSRSKSKP 143
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/104 (23%), Positives = 44/104 (42%) Frame = +1 Query: 232 NKETGVK*DMNTISGGDLQPRRRLARPEHSGGALHRPESSSHCDARVSRSSSKAISLGTA 411 +K+ G + + G + R+R + S R S+S + S SS S +A Sbjct: 43 SKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSA 102 Query: 412 PTERPAVTRQQPLEAASSSRATGWPCPPGRQRVSHARVRDTGTP 543 + + + + ++SSS ++G P P R+ + R R P Sbjct: 103 SSRSGSSSTSR---SSSSSSSSGSPSPSRRRHDNRRRSRSKSKP 143
>UVRC_DESDG (Q313T1) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 700 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = -1 Query: 479 PVALDDDAASSGCCRVTA-------GRSVGAVPRLMALDDDRLTRASQCDEDSGRWRAPP 321 P +++AS R A G V +P A D+ +T A++ + R P Sbjct: 400 PPLCAEESASGSALRAVAEMLTELRGGPVRVLPPRNATDNQLVTMATENAREDARAEKRP 459 Query: 320 ECSGRARRRLGCKSPPLMV 264 + +G +LG +PP+ + Sbjct: 460 DVAGVIAAKLGMSAPPVRI 478
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = +2 Query: 377 GHRPRPSA*GRLPRSDQP*RGNNHLKQR----RRPERRDGLVLPDDSASP----TRGSVT 532 G RPR GR + D+P R ++R R E + L LP + P T +V Sbjct: 1240 GERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPASTPGPEEALTTVTVA 1299 Query: 533 PAPRR 547 P PRR Sbjct: 1300 PPPRR 1304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,719,010 Number of Sequences: 219361 Number of extensions: 2440730 Number of successful extensions: 8275 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 7562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8245 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
