ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal11a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds Length = 819 Score = 888 bits (448), Expect = 0.0 Identities = 589/631 (93%), Gaps = 9/631 (1%) Strand = Plus / Minus Query: 1 caaatatttaggttng-catcacagctataattttgattttttgagtacatgatccaaat 59 |||||||||||||| | ||||||||||| ||||||||||||| | |||||||||||| | Sbjct: 746 caaatatttaggtttggcatcacagcta-aattttgatttttcaaatacatgatccaagt 688 Query: 60 aacaaagagctcaagcaagcggttgcatattcaatacatgaacaagagagccagccaata 119 ||||| ||| |||||||| ||| ||| |||||||||||||||||||| ||||||| Sbjct: 687 aacaacgagatcaagcaa--ggtcgcaaattcaatacatgaacaagag----ggccaata 634 Query: 120 tgcaaatcaagaaggatcttcaagcagtttcagcaacggggtactcgtataccacatcct 179 |||||||||||| |||||||||||||||||| ||||| || ||||| || |||||||| | Sbjct: 633 tgcaaatcaagatggatcttcaagcagtttcggcaaccggatactcatacaccacatctt 574 Query: 180 tgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgc 239 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 573 tgccacaaagcctgcggtacactgcagtgaaggtatccaacttgtactctgtgttgttgc 514 Query: 240 gttcctttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacac 299 ||||| ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 513 gttccattgggtccaagaagatcttaatgatcttcgagccatctagacgatatctgacac 454 Query: 300 gtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcag 359 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 453 gtttccccacaatctcagctgggtacacaacatcctccaaaaggccatcatgaacagcag 394 Query: 360 tcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatcc 419 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 393 tcaaagttctggtacgagggcgaacaacagcagaacccttcttgggtggcctcacaatcc 334 Query: 420 gccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacga 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 gccttgtagcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacga 274 Query: 480 gcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacgg 539 ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||| Sbjct: 273 gcctgacgtggatcttcctgaagttcttgcggagcctatacggcacgtggatgaccacgg 214 Query: 540 ccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtcttttgacg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 213 ccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtc-tttaacg 155 Query: 600 tcgctcttgagctcctggttgccattctcca 630 ||||||||||||||||||||||||||||||| Sbjct: 154 tcgctcttgagctcctggttgccattctcca 124
>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds Length = 600 Score = 414 bits (209), Expect = e-112 Identities = 390/449 (86%), Gaps = 1/449 (0%) Strand = Plus / Minus Query: 182 ccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgt 241 ||||||||||||||||| |||| || |||||| |||| ||||||||| ||||||||||| Sbjct: 553 ccacaaagcctgcggtagactgcagagaaggtctccagcttgtactcagtgttgttgcgc 494 Query: 242 tcctttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgt 301 ||||| ||||||||| |||||||||||| || | ||||| | ||| || |||||||| Sbjct: 493 tccttcgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacacgc 434 Query: 302 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 361 ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||| Sbjct: 433 ttccccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtc 374 Query: 362 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 421 | || || || |||||||| |||||||||||| || |||||||||||||| |||| Sbjct: 373 agggtcctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacgatcctt 314 Query: 422 cttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagc 481 ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 313 cttgttgcaacaaagacaacatccttgccgctaaacttcttctcgagctccctgacgagc 254 Query: 482 ctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggcc 541 ||||| |||||||||||||||| |||||| || | ||| || || ||||| ||||||||| Sbjct: 253 ctgacatggatcttcctgaagggcttgcgcagacggtatggcacatggatcaccacggcc 194 Query: 542 ttcctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtcttttgacgtc 601 ||||||||||| ||||||||||||||| || | ||||||||| ||||| |||| ||| Sbjct: 193 ttcctgttcccaacaacatccatctggattgcagtgttgatgtacaggtc-cttgaggtc 135 Query: 602 gctcttgagctcctggttgccattctcca 630 ||||||||||||||||||||||||||||| Sbjct: 134 gctcttgagctcctggttgccattctcca 106
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene) Length = 852 Score = 394 bits (199), Expect = e-106 Identities = 387/446 (86%), Gaps = 4/446 (0%) Strand = Plus / Minus Query: 185 caaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcc 244 |||||||||||||| |||| || |||||| |||| |||||| || ||||||||||| ||| Sbjct: 596 caaagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcc 537 Query: 245 tttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttc 304 |||||||||||| |||||||||||| || | ||||| | ||| || ||||| || ||| Sbjct: 536 tttgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttc 477 Query: 305 cccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaa 364 |||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 476 cccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtcagg 417 Query: 365 gttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgcctt 424 ||||| || |||||||| |||||||||||| || ||||||||||||||||||| ||| Sbjct: 416 gttctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacaatccttctt 357 Query: 425 gttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 484 |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct: 356 gttgcaacaaagacaacatccttgccgct-aact--ctctcgagctccctgacgagcctg 300 Query: 485 acgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttc 544 || |||||||||||||||| ||||||||| | |||||| || ||||| |||||||||||| Sbjct: 299 acatggatcttcctgaagggcttgcggagacggtacggcacatggatcaccacggccttc 240 Query: 545 ctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtcttttgacgtcgct 604 |||||||| ||||||||||||||| || | ||||||||| ||||| |||| |||||| Sbjct: 239 ctgttcccaacaacatccatctggatcgcagtgttgatgtacaggtc-cttgaggtcgct 181 Query: 605 cttgagctcctggttgccattctcca 630 |||||||||||||||||||||||||| Sbjct: 180 cttgagctcctggttgccattctcca 155
>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence Length = 907 Score = 383 bits (193), Expect = e-103 Identities = 395/461 (85%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 170 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 229 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 653 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 594 Query: 230 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 289 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 593 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 534 Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 349 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 533 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 474 Query: 350 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 409 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 473 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 414 Query: 410 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 469 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 413 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 354 Query: 470 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 529 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 353 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 294 Query: 530 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 589 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 293 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 234 Query: 590 tcttttgacgtcgctcttgagctcctggttgccattctcca 630 || |||| ||||||||||||||||||||| || ||||||| Sbjct: 233 tc-cttgaggtcgctcttgagctcctggttcccgttctcca 194
>gb|AY103554.1| Zea mays PCO154340 mRNA sequence Length = 1075 Score = 383 bits (193), Expect = e-103 Identities = 395/461 (85%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 170 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 229 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 692 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 633 Query: 230 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 289 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 632 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 573 Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 349 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 572 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 513 Query: 350 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 409 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 512 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 453 Query: 410 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 469 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 452 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 393 Query: 470 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 529 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 392 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 333 Query: 530 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 589 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 332 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 273 Query: 590 tcttttgacgtcgctcttgagctcctggttgccattctcca 630 || |||| ||||||||||||||||||||| || ||||||| Sbjct: 272 tc-cttgaggtcgctcttgagctcctggttcccgttctcca 233
>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full insert sequence Length = 966 Score = 345 bits (174), Expect = 1e-91 Identities = 415/494 (84%), Gaps = 1/494 (0%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 655 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 596 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 595 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 536 Query: 255 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 314 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 535 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 476 Query: 315 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 374 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 475 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 416 Query: 375 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 434 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 415 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 356 Query: 435 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 494 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 355 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 296 Query: 495 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 554 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 295 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 236 Query: 555 caacatccatctggaaggcggcgttgatgtagaggtcttttgacgtcgctcttgagctcc 614 ||| ||||||||||| || ||||||||| ||||| |||| ||||||||||||||| Sbjct: 235 caatatccatctggactgcattgttgatgtacaggtc-cttgagctcgctcttgagctcc 177 Query: 615 tggttgccattctc 628 |||||||||||||| Sbjct: 176 tggttgccattctc 163
>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full insert sequence Length = 830 Score = 345 bits (174), Expect = 1e-91 Identities = 415/494 (84%), Gaps = 1/494 (0%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 654 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 595 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 594 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 535 Query: 255 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 314 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 534 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 475 Query: 315 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 374 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 474 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 415 Query: 375 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 434 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 414 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 355 Query: 435 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 494 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 354 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 295 Query: 495 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 554 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 294 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 235 Query: 555 caacatccatctggaaggcggcgttgatgtagaggtcttttgacgtcgctcttgagctcc 614 ||| ||||||||||| || ||||||||| ||||| |||| ||||||||||||||| Sbjct: 234 caatatccatctggactgcattgttgatgtacaggtc-cttgagctcgctcttgagctcc 176 Query: 615 tggttgccattctc 628 |||||||||||||| Sbjct: 175 tggttgccattctc 162
>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence Length = 840 Score = 240 bits (121), Expect = 5e-60 Identities = 377/461 (81%), Gaps = 1/461 (0%) Strand = Plus / Minus Query: 170 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 229 |||||||| || ||||| ||||||||||| || | | || ||| |||| |||||| || Sbjct: 616 accacatctttcccacacagcctgcggtagaccgcaatgcagggctccagcttgtattca 557 Query: 230 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 289 | |||||| | ||||||||||||||||| |||||||| || || || ||||| | ||| Sbjct: 556 gagttgttcctctcctttgggtccaagaaaatcttgataatcttggacccatccacacgg 497 Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 349 ||| ||||| | |||||| ||||||||| |||||| |||||||||||||||| ||||| Sbjct: 496 tatgtgacatgcttcccctcaatctcagttgggtagacaacatcctccaaaatgccatcg 437 Query: 350 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 409 ||||||||||||| ||| || || | |||||| | |||||| || || || |||||| | Sbjct: 436 tgaacagcagtcacagtcctggtcctagggcgcagaacagctgaccccttcgtgggtgcc 377 Query: 410 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 469 |||||||||| |||||| |||||||| || || ||||| ||| |||| |||||||| ||| Sbjct: 376 ctcacaatcccccttgtagcaacaattaccacatccttcccgatgaatttcttctccagc 317 Query: 470 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 529 ||||||| ||| ||||| ||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 316 tccctgaagagtctgacatggatcttcctgaagcccttgcgcagacggtatgggacgtgg 257 Query: 530 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 589 ||||| | |||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 256 atgacatcacccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 197 Query: 590 tcttttgacgtcgctcttgagctcctggttgccattctcca 630 || |||| ||||||||||| ||||||||| || ||||||| Sbjct: 196 tc-cttgaggtcgctcttgacctcctggttcccgttctcca 157
>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full insert sequence Length = 811 Score = 163 bits (82), Expect = 9e-37 Identities = 161/186 (86%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 443 tccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaag 502 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| Sbjct: 357 tccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaat 298 Query: 503 gacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcc 562 | |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| |||| Sbjct: 297 gccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcc 238 Query: 563 atctggaaggcggcgttgatgtagaggtcttttgacgtcgctcttgagctcctggttgcc 622 ||||||| || ||||||||| ||||| |||| ||||||||||||||||||||||| Sbjct: 237 atctggactgcattgttgatgtacaggtc-cttgagctcgctcttgagctcctggttgcc 179 Query: 623 attctc 628 |||||| Sbjct: 178 attctc 173 Score = 113 bits (57), Expect = 7e-22 Identities = 168/205 (81%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 577 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 518 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 517 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 458 Query: 255 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 314 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 457 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 398 Query: 315 cagctgggtaaacaacatcctccaa 339 |||||||||| || ||||| ||||| Sbjct: 397 cagctgggtagactacatcttccaa 373
>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7) mRNA, complete cds Length = 919 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 600 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 541 Query: 280 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 339 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 540 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 481 Query: 340 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 399 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 480 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 421 Query: 400 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 459 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 420 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 361 Query: 460 cttctcgagctccctgacgagcctgacgtggatcttc 496 |||||| || ||||| || ||||| || ||||||||| Sbjct: 360 cttctcaagttccctaacaagcctcacatggatcttc 324
>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full insert sequence Length = 910 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 280 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 339 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 340 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 399 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 400 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 459 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 460 cttctcgagctccctgacgagcctgacgtggatcttc 496 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full insert sequence Length = 910 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 280 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 339 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 340 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 399 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 400 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 459 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 460 cttctcgagctccctgacgagcctgacgtggatcttc 496 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full insert sequence Length = 903 Score = 145 bits (73), Expect = 2e-31 Identities = 226/277 (81%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 280 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 339 | | | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 acccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 340 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 399 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 400 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 459 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 460 cttctcgagctccctgacgagcctgacgtggatcttc 496 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10366335 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10366276 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10366275 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10366216 Query: 564 tctgg 568 ||||| Sbjct: 10366215 tctgg 10366211 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10367112 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10367053 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10367052 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10366993 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10366992 ttcttgggaggcctcacaatcctccttgttgcaacaat 10366955 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10370579 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10370520 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10370519 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10370460 Query: 564 tctgg 568 ||||| Sbjct: 10370459 tctgg 10370455 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10371367 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10371308 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10371307 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10371248 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10371247 ttcttgggaggcctcacaatcctccttgttgcaacaat 10371210 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10371759 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10371700 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10371699 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10371640 Query: 255 agaagatct 263 |||| |||| Sbjct: 10371639 agaaaatct 10371631 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10367503 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10367444 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10367443 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10367384 Query: 255 agaagatct 263 |||| |||| Sbjct: 10367383 agaaaatct 10367375 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 10370294 tcgctcttgagctcctggttgccattctc 10370266 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 10366054 tcgctcttgagctcctggttgccattctc 10366026
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 22888 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 22829 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 22828 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 22769 Query: 564 tctgg 568 ||||| Sbjct: 22768 tctgg 22764 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 23665 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 23606 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 23605 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 23546 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 23545 ttcttgggaggcctcacaatcctccttgttgcaacaat 23508 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 27132 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 27073 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 27072 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 27013 Query: 564 tctgg 568 ||||| Sbjct: 27012 tctgg 27008 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 27920 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 27861 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 27860 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 27801 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 27800 ttcttgggaggcctcacaatcctccttgttgcaacaat 27763 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 28312 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 28253 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 28252 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 28193 Query: 255 agaagatct 263 |||| |||| Sbjct: 28192 agaaaatct 28184 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 24056 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 23997 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 23996 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 23937 Query: 255 agaagatct 263 |||| |||| Sbjct: 23936 agaaaatct 23928 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 26847 tcgctcttgagctcctggttgccattctc 26819 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 22607 tcgctcttgagctcctggttgccattctc 22579
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 79801 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 79742 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 79741 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 79682 Query: 564 tctgg 568 ||||| Sbjct: 79681 tctgg 79677 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 80578 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 80519 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 80518 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 80459 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 80458 ttcttgggaggcctcacaatcctccttgttgcaacaat 80421 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 84045 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 83986 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 83985 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 83926 Query: 564 tctgg 568 ||||| Sbjct: 83925 tctgg 83921 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 84833 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 84774 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 84773 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 84714 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 84713 ttcttgggaggcctcacaatcctccttgttgcaacaat 84676 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 85225 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 85166 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 85165 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 85106 Query: 255 agaagatct 263 |||| |||| Sbjct: 85105 agaaaatct 85097 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 80969 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 80910 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 80909 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 80850 Query: 255 agaagatct 263 |||| |||| Sbjct: 80849 agaaaatct 80841 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 83760 tcgctcttgagctcctggttgccattctc 83732 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 79520 tcgctcttgagctcctggttgccattctc 79492
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10364436 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10364377 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10364376 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10364317 Query: 564 tctgg 568 ||||| Sbjct: 10364316 tctgg 10364312 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10365213 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10365154 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10365153 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10365094 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10365093 ttcttgggaggcctcacaatcctccttgttgcaacaat 10365056 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 503 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10368680 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10368621 Query: 504 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 563 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10368620 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10368561 Query: 564 tctgg 568 ||||| Sbjct: 10368560 tctgg 10368556 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 337 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10369468 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10369409 Query: 338 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 397 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10369408 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10369349 Query: 398 tttttgggtggcctcacaatccgccttgttgcaacaat 435 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10369348 ttcttgggaggcctcacaatcctccttgttgcaacaat 10369311 Score = 81.8 bits (41), Expect = 3e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10369860 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10369801 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10369800 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10369741 Query: 255 agaagatct 263 |||| |||| Sbjct: 10369740 agaaaatct 10369732 Score = 65.9 bits (33), Expect = 2e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 135 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 194 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10365604 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10365545 Query: 195 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 254 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10365544 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10365485 Query: 255 agaagatct 263 |||| |||| Sbjct: 10365484 agaaaatct 10365476 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 10368395 tcgctcttgagctcctggttgccattctc 10368367 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 600 tcgctcttgagctcctggttgccattctc 628 ||||||||||||||||||||||||||||| Sbjct: 10364155 tcgctcttgagctcctggttgccattctc 10364127
>ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 330 catcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacag 389 |||||||||| | ||||||||||||| | ||||||||||||||||||| || ||||| Sbjct: 235 catcctccaagattccatcatgaacagtaatcaaagttcttgtacgaggatgatgaacag 176 Query: 390 cagaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgc 449 | ||||| || ||| | ||||||||||||| |||||||||| ||| || || ||||||| Sbjct: 175 ctgaacccttattgagaggcctcacaatcctccttgttgcatcaaagaccacatccttgc 116 Query: 450 cgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 501 | |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 115 cactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 64
>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds Length = 392 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 133 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 192 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 177 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 118 Query: 193 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 252 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 117 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 58 Query: 253 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 307 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 57 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 3
>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence Length = 393 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 133 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 192 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 178 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 119 Query: 193 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 252 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 118 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 59 Query: 253 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 307 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 58 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 4
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 349 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 15621 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 15680 Query: 350 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 409 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 15681 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 15740 Query: 410 ctcac 414 ||||| Sbjct: 15741 ctcac 15745 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 263 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 14995 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 15038
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 349 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 119434 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 119493 Query: 350 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 409 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 119494 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 119553 Query: 410 ctcac 414 ||||| Sbjct: 119554 ctcac 119558 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 263 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 118808 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 118851
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 349 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 16168264 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 16168323 Query: 350 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 409 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 16168324 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 16168383 Query: 410 ctcac 414 ||||| Sbjct: 16168384 ctcac 16168388 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 263 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 16167638 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 16167681
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 302 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 361 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 13024659 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 13024717 Query: 362 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 421 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 13024718 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 13024777 Query: 422 cttgttgca 430 ||||||||| Sbjct: 13024778 cttgttgca 13024786 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 173 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 232 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 13024255 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 13024314 Query: 233 ttgttgcgttcctttgggtccaagaagatc 262 |||||||| |||||||| |||||||||||| Sbjct: 13024315 ttgttgcgctcctttggatccaagaagatc 13024344 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 501 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 13025424 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 13025481
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 302 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 361 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 134302 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 134360 Query: 362 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 421 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 134361 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 134420 Query: 422 cttgttgca 430 ||||||||| Sbjct: 134421 cttgttgca 134429 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 173 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 232 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 133898 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 133957 Query: 233 ttgttgcgttcctttgggtccaagaagatc 262 |||||||| |||||||| |||||||||||| Sbjct: 133958 ttgttgcgctcctttggatccaagaagatc 133987 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 501 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 135067 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 135124
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 302 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 361 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 1236 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 1294 Query: 362 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 421 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 1295 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 1354 Query: 422 cttgttgca 430 ||||||||| Sbjct: 1355 cttgttgca 1363 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 173 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 232 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 832 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 891 Query: 233 ttgttgcgttcctttgggtccaagaagatc 262 |||||||| |||||||| |||||||||||| Sbjct: 892 ttgttgcgctcctttggatccaagaagatc 921 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 501 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 2001 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 2058
>ref|NM_103777.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.1 mRNA, complete cds Length = 842 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 273 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 601 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 548
>ref|NM_179455.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.2 mRNA, complete cds Length = 837 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 273 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 541 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 488
>gb|AY072617.1| Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 576 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 273 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 498 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 445
>gb|AF412048.1|AF412048 Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 814 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 273 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 595 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 542
>gb|AY086866.1| Arabidopsis thaliana clone 28739 mRNA, complete sequence Length = 841 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 273 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 599 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 546 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 392 gaaccttttttgggtggcctcacaatccgccttgttgcaa 431 ||||| || ||||| ||||||||||||| |||||| |||| Sbjct: 427 gaacccttcttgggcggcctcacaatcctccttgtagcaa 388
>gb|DQ228355.1| Solanum tuberosum clone 153A08 ribosomal protein S7-like protein mRNA, complete cds Length = 881 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 209 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 268 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 602 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 543 Query: 269 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 328 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 542 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 483 Query: 329 acatcctccaaaagaccatcatgaacag 356 | ||||||||| | |||||||||||| Sbjct: 482 aaatcctccaatatggcatcatgaacag 455
>gb|DQ200382.1| Solanum tuberosum clone 063A09 unknown mRNA Length = 817 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 209 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 268 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 589 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 530 Query: 269 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 328 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 529 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 470 Query: 329 acatcctccaaaagaccatcatgaacag 356 | ||||||||| | |||||||||||| Sbjct: 469 aaatcctccaatatggcatcatgaacag 442
>gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BAC F11I4 genomic sequence, complete sequence Length = 80561 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 260 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 2112 cttgtactctgtgttgttcctttcctttgggtccaagaaga 2072
>gb|AC084242.4|AC084242 Arabidopsis thaliana chromosome 1 BAC T24P22 genomic sequence, complete sequence Length = 18062 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 260 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 15801 cttgtactctgtgttgttcctttcctttgggtccaagaaga 15761
>gb|DQ191636.1| Solanum tuberosum 40S ribosomal protein S7-like protein mRNA, complete cds Length = 893 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 209 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 256 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 585 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 538
>ref|XM_784661.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S7 (S8) (LOC584812), mRNA Length = 667 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 445 cttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 496 ||||||||||||||||||||| ||||| | ||| |||||||| ||||||||| Sbjct: 290 cttgccgctgaacttcttctcaagctctcggactagcctgacctggatcttc 239
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 215 tccaacttgtactctgtgttgttgcgttcctttgggtccaagaa 258 |||| ||||||||| |||||||| |||||||||||||||||||| Sbjct: 14984 tccagcttgtactcagtgttgtttcgttcctttgggtccaagaa 14941 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgac 477 ||||||| || ||||||||||| ||||||||||| Sbjct: 14053 ccttgccactaaacttcttctcaagctccctgac 14020 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 278 ccatcaagacgatatctgacacgtttccccacaatctcagc 318 ||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 14772 ccatcaactcgatacctcacacgtttcccaacaatctcagc 14732 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cgttcctttgggtccaagaa 258 |||||||||||||||||||| Sbjct: 43270 cgttcctttgggtccaagaa 43251 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcct 483 ||||||| || |||||||||| ||||||||||| ||||| Sbjct: 24439 ccttgccactaaacttcttcttaagctccctgactagcct 24400
>gb|DQ241830.1| Solanum tuberosum clone 174B09 40S ribosomal protein S7-like protein-like mRNA, complete cds Length = 894 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 209 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 256 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 592 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 545
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatctt 495 |||| |||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 45492 cctttccgctgaatttcttctcgagctccctaacaagcctgacatgaatctt 45441
>gb|BT009440.1| Triticum aestivum clone wlmk4.pk0019.f5:fis, full insert mRNA sequence Length = 1907 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 603 ctcttgagctcctggttgccattctcca 630 |||||||||||||||||||||||||||| Sbjct: 1636 ctcttgagctcctggttgccattctcca 1609
>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA, partial cds Length = 546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 225 actctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaa 284 |||| ||||||||||| ||||| || ||||||||||||||| | ||||| || ||||||| Sbjct: 546 actcagtgttgttgcgctccttgggatccaagaagatcttgctaattttggacccatcaa 487
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccct 474 ||||||| ||||||||||||||||||||||| Sbjct: 125704 ccttgccactgaacttcttctcgagctccct 125674
>gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 336 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 436 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 484 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>gb|AF098519.1|AF098519 Avicennia marina unknown mRNA Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 290 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 336 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 436 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 484 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>ref|XM_716679.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_1700), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 346 atcatgaacagcagtcaaagttcttg 371 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>ref|XM_716558.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_9267), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 346 atcatgaacagcagtcaaagttcttg 371 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 444 ccttgccgctgaacttcttctcgagctccct 474 ||||||| |||||||||||||| |||||||| Sbjct: 142888 ccttgccactgaacttcttctccagctccct 142858
>emb|X94942.1|FRRPS7U17 F.rubripes rpS7 and snoRNA U17 genes Length = 4298 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 440 acgtccttgccgctgaacttcttctcgagctccct 474 |||| ||| ||||||||||||||||| |||||||| Sbjct: 2003 acgtgctttccgctgaacttcttctccagctccct 1969
>ref|NM_121618.2| Arabidopsis thaliana structural constituent of ribosome AT5G16130 mRNA, complete cds Length = 878 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 443 tccttgccgctgaacttcttctcgagctccctgacgag 480 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 280 atcaagacg 288 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AY940168.1| Cyanophage P-SSM4, complete genome Length = 178249 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 caagaagatcttgatgattttc 274 |||||||||||||||||||||| Sbjct: 153250 caagaagatcttgatgattttc 153271
>ref|XM_963054.1| PREDICTED: Tribolium castaneum similar to CG1883-PA, isoform A (LOC656528), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 436 aacaacgtccttgccgctgaacttcttctc 465 |||||||| |||||||||||||||||||| Sbjct: 307 aacaacgtgtttgccgctgaacttcttctc 278
>gb|AF402815.1| Ictalurus punctatus 40S ribosomal protein S7 mRNA, complete cds Length = 641 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 445 cttgccgctgaacttcttctcgagctccctgacgagcc 482 |||||| |||||||||||||| ||||||| ||||||| Sbjct: 292 cttgccactgaacttcttctccagctcccgcacgagcc 255
>gb|BT024914.1| Arabidopsis thaliana At5g16130 mRNA, complete cds Length = 573 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 443 tccttgccgctgaacttcttctcgagctccctgacgag 480 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 275 tcctttccactgaacttcttctcaagctctctgacgag 238 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 498 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 439 Query: 280 atcaagacg 288 ||||||||| Sbjct: 438 atcaagacg 430
>emb|BX832565.1|CNS09ZKS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 443 tccttgccgctgaacttcttctcgagctccctgacgag 480 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 330 tcctttccactgaacttcttctcaagctctctgacgag 293 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 553 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 494 Query: 280 atcaagacg 288 ||||||||| Sbjct: 493 atcaagacg 485
>gb|AY086292.1| Arabidopsis thaliana clone 23518 mRNA, complete sequence Length = 872 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 443 tccttgccgctgaacttcttctcgagctccctgacgag 480 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 280 atcaagacg 288 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 452 ctgaacttcttctcgagctccctgac 477 |||||||||||||||||||| ||||| Sbjct: 347 ctgaacttcttctcgagctctctgac 322 Score = 42.1 bits (21), Expect = 2.2 Identities = 93/117 (79%) Strand = Plus / Minus Query: 220 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 279 ||||||||| |||||||| | ||||| || ||||| | | ||| ||||| || | ||| Sbjct: 579 cttgtactcagtgttgttcctctccttaggctccaaatacaccttcatgatcttggtgcc 520 Query: 280 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 336 ||||| ||| |||||| ||| || || ||||||||||| |||||| | |||||||| Sbjct: 519 atcaacacggtatctggtacgctttccaacaatctcagcagggtaagcgacatcctc 463
>emb|AL731836.10| Mouse DNA sequence from clone RP23-119A13 on chromosome 2, complete sequence Length = 83802 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 538 ggccttcctgttccctgcaacatcca 563 |||||||||||| ||||||||||||| Sbjct: 58345 ggccttcctgtttcctgcaacatcca 58370
>gb|AY769321.1| Bombyx mori ribosomal protein S7 (RpS7) mRNA, complete cds Length = 657 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 452 ctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 496 ||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 275 ctgaacttcttttcgagctcacggacaagcctgatctggatcttc 231
>emb|AL353592.9| Human DNA sequence from clone RP11-569O12 on chromosome 13, complete sequence Length = 63325 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 tatccaacttgtactctgtgt 233 ||||||||||||||||||||| Sbjct: 33035 tatccaacttgtactctgtgt 33055
>gb|AF526221.1| Argopecten irradians isolate iolsaicl205ct237cn254 ribosomal protein S7 mRNA, complete cds Length = 651 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 449 ccgctgaacttcttctcgagctccctgac 477 |||||||||||||| || ||||||||||| Sbjct: 276 ccgctgaacttcttttccagctccctgac 248
>emb|AL391148.1|ATT21H19 Arabidopsis thaliana DNA chromosome 5, BAC clone T21H19 (ESSA project) Length = 77311 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 452 ctgaacttcttctcgagctccctgacgag 480 |||||||||||||| ||||| |||||||| Sbjct: 13437 ctgaacttcttctcaagctctctgacgag 13409
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 ctggaaggcggcgttgatgtagagg 589 |||||||||||| |||||||||||| Sbjct: 12815416 ctggaaggcggcattgatgtagagg 12815440
>emb|BX822663.1|CNS0A5ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 760 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 308 acaatctcagctgggtaaacaacatcctc 336 ||||||||||| |||||| |||||||||| Sbjct: 477 acaatctcagcagggtaagcaacatcctc 449
>gb|AY130375.1| Branchiostoma lanceolatum ribosomal protein S7 mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 445 cttgccgctgaacttcttctcgagctccc 473 |||||| |||||||||||||| ||||||| Sbjct: 241 cttgccactgaacttcttctccagctccc 213
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence Length = 78121 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gggtggcctcacaatccgcct 423 ||||||||||||||||||||| Sbjct: 28376 gggtggcctcacaatccgcct 28396
>dbj|AK173962.1| Ciona intestinalis cDNA, clone:cixxx00042, full insert sequence Length = 675 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 446 ttgccgctgaacttcttctcgagctccct 474 |||||||| ||||||||||| |||||||| Sbjct: 361 ttgccgctaaacttcttctctagctccct 389
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 565 ctggaaggcggcgttgatgtagagg 589 |||||||||||| |||||||||||| Sbjct: 73540 ctggaaggcggcattgatgtagagg 73564
>dbj|AK112218.1| Ciona intestinalis cDNA, clone:ciad004i11, full insert sequence Length = 730 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 446 ttgccgctgaacttcttctcgagctccct 474 |||||||| ||||||||||| |||||||| Sbjct: 351 ttgccgctaaacttcttctctagctccct 323
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccacatccttgccacaaagc 190 |||||||||||||||||||| Sbjct: 118232 ccacatccttgccacaaagc 118213
>gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 aattttgattttttgagtac 48 |||||||||||||||||||| Sbjct: 97930 aattttgattttttgagtac 97911
>ref|XM_581800.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S7 (S8) (LOC505507), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 440 acgtccttgccgctgaacttcttctcgagctc 471 |||| ||| ||||||||||||||||| ||||| Sbjct: 803 acgtgcttcccgctgaacttcttctccagctc 772
>ref|XM_425623.1| PREDICTED: Gallus gallus similar to Protocadherin 8 precursor (Arcadlin) (LOC428065), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gtccttgccgctgaacttct 461 |||||||||||||||||||| Sbjct: 2832 gtccttgccgctgaacttct 2813
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ctataattttgattttttgagtac 48 |||||||||||||||||| ||||| Sbjct: 645026 ctataattttgattttttcagtac 645003
>gb|AC183987.3| Pan troglodytes BAC clone CH251-265I5 from chromosome 6, complete sequence Length = 162913 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tttgagtacatgatccaaat 59 |||||||||||||||||||| Sbjct: 9958 tttgagtacatgatccaaat 9977
>ref|XM_535981.2| PREDICTED: Canis familiaris similar to titin (LOC478819), mRNA Length = 45229 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ataattttgattttttgagt 46 |||||||||||||||||||| Sbjct: 899 ataattttgattttttgagt 880
>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete sequence Length = 154633 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 tcctccaaaagaccatcatg 351 |||||||||||||||||||| Sbjct: 14399 tcctccaaaagaccatcatg 14418
>emb|CR847946.7| Zebrafish DNA sequence from clone CH211-274N1 in linkage group 18, complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 aacaacagcagaaccttttttggg 405 ||||| |||||||||||||||||| Sbjct: 88104 aacaaaagcagaaccttttttggg 88081
>emb|BX000440.10| Zebrafish DNA sequence from clone CH211-14L9 in linkage group 16, complete sequence Length = 162906 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 acagctataattttgatttt 40 |||||||||||||||||||| Sbjct: 117403 acagctataattttgatttt 117422
>emb|AL512427.10| Human DNA sequence from clone RP11-325M4 on chromosome 6 Contains a retinoblastoma binding protein 4 (RBBP4) pseudogene, complete sequence Length = 201657 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tttgagtacatgatccaaat 59 |||||||||||||||||||| Sbjct: 173751 tttgagtacatgatccaaat 173732
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 taattttgattttttgagta 47 |||||||||||||||||||| Sbjct: 132506 taattttgattttttgagta 132525
>emb|AL138836.15| Human DNA sequence from clone RP11-88M19 on chromosome 9 Contains the 5' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), the EGFL5 gene for EGF-like-domain, multiple 5 (MEGF9), an S-adenosylhomocysteine hydrolase (AHCY) pseudogene, the 3' end of a variant of the FBXW2 gene for F-box and WD-40 domain protein 2 (FBW2) and a CpG island, complete sequence Length = 188481 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 tcacagctataattttgatttttt 42 |||||||||||||||| ||||||| Sbjct: 148845 tcacagctataatttttatttttt 148822
>emb|AL021368.1|HS55C20 Human DNA sequence from clone XXbac-55C20 on chromosome 6 Contains a beta glucuronidase (GUSB) pseudogene, the gene for a novel protein similar to Spinal Muscular Atrophy region proteins SMA3, 4 and 5, a novel pseudogene, three novel genes and a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, complete sequence Length = 188642 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tttgagtacatgatccaaat 59 |||||||||||||||||||| Sbjct: 180539 tttgagtacatgatccaaat 180558
>emb|X85811.1|SCTRNAORF S.cerevisiae tRNA-Leu, and ORF's N2212, N2215, N2219, N2223, N2227, N2231 Length = 14261 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgaacagcagtcaaagttct 369 |||||||||||||||||||| Sbjct: 1311 tgaacagcagtcaaagttct 1330
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 acttcttctcgagctccctg 475 |||||||||||||||||||| Sbjct: 105724 acttcttctcgagctccctg 105743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 acttcttctcgagctccctg 475 |||||||||||||||||||| Sbjct: 66009 acttcttctcgagctccctg 66028
>gb|U39674.1| Caenorhabditis elegans cosmid C06E2, complete sequence Length = 47743 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ataattttgattttttgagt 46 |||||||||||||||||||| Sbjct: 33502 ataattttgattttttgagt 33521
>gb|AY057110.1| Dictyocaulus viviparus cathepsin L (cpl-1) gene, partial cds Length = 3287 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 acagctataattttgatttt 40 |||||||||||||||||||| Sbjct: 470 acagctataattttgatttt 489
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tgaacagcagtcaaagttct 369 |||||||||||||||||||| Sbjct: 215257 tgaacagcagtcaaagttct 215238
>gb|DQ066326.1| Ixodes scapularis isolate IS-6-12L-109 40S ribosomal protein S7-like mRNA, partial cds Length = 594 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gccgctgaacttcttctcgagctc 471 |||||||||||||||||| ||||| Sbjct: 300 gccgctgaacttcttctccagctc 277
>gb|AC016703.7| Homo sapiens BAC clone RP11-194L1 from 2, complete sequence Length = 33571 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tgtagaggtcttttgacgtc 601 |||||||||||||||||||| Sbjct: 25309 tgtagaggtcttttgacgtc 25328
>gb|AF543540.1| Oncorhynchus mykiss 40S ribosomal protein S7 mRNA, partial cds Length = 132 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 ccgctgaacttcttctcgagctccctgacgag 480 |||||||||||||| || |||||||| ||||| Sbjct: 38 ccgctgaacttcttttccagctccctcacgag 7
>ref|XM_317713.2| Anopheles gambiae str. PEST ENSANGP00000010255 (ENSANGG00000007766), partial mRNA Length = 921 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 atcttgatgattttcgagcc 279 |||||||||||||||||||| Sbjct: 713 atcttgatgattttcgagcc 694
>ref|NM_208681.1| Eremothecium gossypii ACL076Wp (ACL076W), mRNA Length = 573 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tgaacagcagtcaaagttct 369 |||||||||||||||||||| Sbjct: 365 tgaacagcagtcaaagttct 346
>emb|Z71372.1|SCYNL096C S.cerevisiae chromosome XIV reading frame ORF YNL096c Length = 2553 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgaacagcagtcaaagttct 369 |||||||||||||||||||| Sbjct: 1248 tgaacagcagtcaaagttct 1267
>gb|DQ333046.1| Synthetic construct Saccharomyces cerevisiae clone FLH005626.01X RPS7B gene, complete sequence Length = 918 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tgaacagcagtcaaagttct 369 |||||||||||||||||||| Sbjct: 710 tgaacagcagtcaaagttct 691
>emb|CT033777.6| Mouse DNA sequence from clone RP24-267J1 on chromosome 13, complete sequence Length = 36316 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 caaataacaaagagctcaag 74 |||||||||||||||||||| Sbjct: 17426 caaataacaaagagctcaag 17407
>emb|CT032657.1| Platynereis dumerilii EST IB0AAA33DH04EM1 Length = 652 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ttgccgctgaacttcttctc 465 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032656.1| Platynereis dumerilii EST IB0AAA33DH04FM1 Length = 652 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ttgccgctgaacttcttctc 465 |||||||||||||||||||| Sbjct: 375 ttgccgctgaacttcttctc 394
>emb|CT032509.1| Platynereis dumerilii EST IB0AAA37AD11EM1 Length = 682 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ttgccgctgaacttcttctc 465 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032319.1| Platynereis dumerilii EST IB0AAA40DA08EM1 Length = 783 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ttgccgctgaacttcttctc 465 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032256.1| Platynereis dumerilii EST IB0AAA42AH05EM1 Length = 810 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ttgccgctgaacttcttctc 465 |||||||||||||||||||| Sbjct: 312 ttgccgctgaacttcttctc 293
>emb|AM159218.1| Oncorhynchus mykiss mRNA for 40S ribosomal protein S7 (rps7 gene) Length = 718 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 ccgctgaacttcttctcgagctccctgacgag 480 |||||||||||||| || |||||||| ||||| Sbjct: 399 ccgctgaacttcttttccagctccctcacgag 368
>gb|DQ115393.1| Saccharomyces cerevisiae Pol1p (POL1) gene, partial cds; and Avt4p (AVT4), Ynl100wp (YNL100W), Oca1p (OCA1), Ras2p (RAS2), Ynl097c-bp (YNL097C-B), Pho23p (PHO23), Rps7bp (RPS7B), Ynl095cp (YNL095C), App1p (APP1), Ypt53p (YPT53), Ynl092wp (YNL092W), Nst1p (NST1), Rho2p (RHO2), Ynl089cp (YNL089C), Top2p (TOP2), Tcb2p (TCB2), Ynl086wp (YNL086W), Mkt1p (MKT1), End3p (END3), Sal1p (SAL1), Pms1p (PMS1), Sws2p (SWS2), Ynl080cp (YNL080C), and Tpm1p (TPM1) genes, complete cds Length = 48787 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgaacagcagtcaaagttct 369 |||||||||||||||||||| Sbjct: 13003 tgaacagcagtcaaagttct 13022
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ttttgattttttgagtacat 50 |||||||||||||||||||| Sbjct: 100007 ttttgattttttgagtacat 99988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,839,865 Number of Sequences: 3902068 Number of extensions: 5839865 Number of successful extensions: 136506 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136050 Number of HSP's gapped (non-prelim): 421 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
