>CCD72_XENTR (Q28GR1) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -1

Query: 348 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 265
           ++GGK KPLKQ K + KD DE+++A+ Q
Sbjct: 4   REGGKKKPLKQPKKSNKDMDEDEIAFKQ 31

>CCD72_MOUSE (Q8K003) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 348 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 265
           ++GGK KPLKQ K   K+ DE D A+ Q
Sbjct: 4   REGGKKKPLKQPKKQAKEMDEEDKAFKQ 31

>CCD72_HUMAN (Q9Y2S6) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 348 KQGGKAKPLKQAKVAEKDYDENDLAYLQ 265
           ++GGK KPLKQ K   K+ DE D A+ Q
Sbjct: 4   REGGKKKPLKQPKKQAKEMDEEDKAFKQ 31

>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2) (Fragment)
          Length = 1146

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 156 GRLISSHSSSDQILPAHPSGQPWPSAPSGP 245
           G++IS+  SS   LP  P G P P  P+GP
Sbjct: 389 GKVISAEGSSTIALPG-PPGPPGPIGPTGP 417

>Y022_THEAC (Q9HM47) UPF0204 protein Ta0022|
          Length = 256

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 126 LSFSGHYEWAGRLISSHSSSDQI--LPAHPSGQPWPSAPSG 242
           +S SG Y++   ++S HSS+  +  L AHP+G   PSA  G
Sbjct: 52  MSLSGKYDYLV-VLSRHSSAADVKSLTAHPTGNFGPSADLG 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,170,151
Number of Sequences: 219361
Number of extensions: 534811
Number of successful extensions: 1994
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)