ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10k11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ495771.1|HVU495771 Hordeum vulgare partial mRNA for putati... 747 0.0
2emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) ... 218 1e-53
3dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
5dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
6dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 153 7e-34
7ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ ... 76 1e-10
8gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reducta... 76 1e-10
9gb|AY093250.1| Arabidopsis thaliana putative thioredoxin reducta... 76 1e-10
10gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reducta... 76 1e-10
11gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, com... 76 1e-10
12emb|BX821094.1|CNS0A9Z3 Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
13emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
14emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
15gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map... 54 5e-04
16emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
17emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in ... 44 0.46
18emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in ... 44 0.46
19emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on ch... 44 0.46
20gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosom... 42 1.8
21gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosom... 42 1.8
22gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, com... 42 1.8
23gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosom... 42 1.8
24emb|AL139101.13| Human DNA sequence from clone RP3-414L4 on chro... 42 1.8
25gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosom... 42 1.8
26gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosom... 42 1.8
27gb|AC151897.3| Mus musculus BAC clone RP24-257D11 from chromosom... 42 1.8
28gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome 42 1.8
29gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, comple... 42 1.8
30emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on ch... 42 1.8
31gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, co... 40 7.1
32gb|AC148991.2| Mus musculus BAC clone RP23-52N2 from chromosome ... 40 7.1
33gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer... 40 7.1
34gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosom... 40 7.1
35emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 i... 40 7.1
36gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosom... 40 7.1
37emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chrom... 40 7.1
38gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, co... 40 7.1
39ref|XM_720110.1| Plasmodium yoelii yoelii str. 17XNL 26S proteas... 40 7.1
40ref|XM_736359.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.1
41gb|U70857.2| Caenorhabditis elegans cosmid C10G8, complete sequence 40 7.1
42gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete se... 40 7.1
43ref|XM_791044.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 7.1
44emb|AL109809.18|HSJ673D20 Human DNA sequence from clone RP4-673D... 40 7.1
45emb|CR627485.10| Zebrafish DNA sequence from clone DKEY-203E10 i... 40 7.1
46gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 7.1
47gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosom... 40 7.1
48emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chr... 40 7.1
49gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complet... 40 7.1
50gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Ro... 40 7.1
51gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, comple... 40 7.1
52gb|AC093479.13| Mus musculus chromosome 16, clone RP23-61K2, com... 40 7.1
53dbj|AK139136.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 7.1
54gb|AC160059.7| Mus musculus 6 BAC RP23-172L21 (Roswell Park Canc... 40 7.1
55gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, com... 40 7.1
56gb|AC152959.2| Mus musculus 6 BAC RP23-78B5 (Roswell Park Cancer... 40 7.1
57dbj|AK038447.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 7.1
58gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, compl... 40 7.1
59gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, com... 40 7.1
60gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, comple... 40 7.1
61gb|AC092177.4| Homo sapiens BAC clone RP11-69D8 from 2, complete... 40 7.1
62gb|AC138317.11| Mus musculus chromosome 8, clone RP23-271F20, co... 40 7.1
63gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, com... 40 7.1
64gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, co... 40 7.1
65gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome ... 40 7.1
66emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chr... 40 7.1

>emb|AJ495771.1|HVU495771 Hordeum vulgare partial mRNA for putative thioredoxin reductase
          Length = 642

 Score =  747 bits (377), Expect = 0.0
 Identities = 421/445 (94%)
 Strand = Plus / Minus

                                                                       
Query: 82  ggggtcancaagatgttatattgtccaacaaagaatatatttnggattcaataagggcga 141
           ||||||| ||||||||||| |||| |||||||| |||||||| |||||||||||||||| 
Sbjct: 617 ggggtcaacaagatgttatwttgtacaacaaagratatattttggattcaataagggcgr 558

                                                                       
Query: 142 tcggttaatttcctatggcntgactgcnccaggctcatntganaatttgaccaaaaatng 201
           ||||||||||||||||||| ||||||| ||||| |||| ||  ||||||||||||||| |
Sbjct: 557 tcggttaatttcctatggcatgactgcaccaggstcatctgrgaatttgaccaaaaattg 498

                                                                       
Query: 202 cccaccagcgnggcttctaaatntagncaatatatgtgtnaatggaggccattacacttc 261
           ||||||| || ||||||||||| ||| |||||||||||| ||||||||||||||||||||
Sbjct: 497 cccaccascgtggcttctaaatataghcaatatatgtgtaaatggaggccattacacttc 438

                                                                       
Query: 262 aaaaccctgggacaaacaatgagctcagatcatttgttcgactcaatgaattcccggtat 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaaaccctgggacaaacaatgagctcagatcatttgttcgactcaatgaattcccggtat 378

                                                                       
Query: 322 tccttcttcatcttcacaccaaanaaagncctgatcatttctttgtttttaaagaactga 381
           ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||
Sbjct: 377 tccttcttcatcttcacaccagagaaagtcctgatcatttctttgtttttaaagaactga 318

                                                                       
Query: 382 acacaaggtgttcccatgatgcctgcagcttctgctntttcagggncctnttcaatgtca 441
           |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 317 acacaaggtgttcccatgatgcctgcagcttctgctatttcagggtcctcttcaatgtca 258

                                                                       
Query: 442 atttcaacaaaatgaacgtattcgtcatactcatctataaccttgttcaaaattggtttt 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atttcaacaaaatgaacgtattcgtcatactcatctataaccttgttcaaaattggtttt 198

                                    
Query: 502 aatgttctgcagggaccacatgttg 526
           |||||||||||||||||||||||||
Sbjct: 197 aatgttctgcagggaccacatgttg 173



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>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin
            reductase (NtrC gene)
          Length = 1684

 Score =  218 bits (110), Expect = 1e-53
 Identities = 207/241 (85%)
 Strand = Plus / Minus

                                                                        
Query: 286  tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccaaan 345
            |||| ||||||||| ||||| || || ||||  |||||||||||||| || |||||| | 
Sbjct: 1528 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 1469

                                                                        
Query: 346  aaagncctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcct 405
            | || ||||| ||||||||| |||||||| || |||||||| ||||||||||||||||||
Sbjct: 1468 acagtcctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcct 1409

                                                                        
Query: 406  gcagcttctgctntttcagggncctnttcaatgtcaatttcaacaaaatgaacgtattcg 465
            |||||||||||| |||||||  |||  || ||||||||||| ||||||||||||| ||||
Sbjct: 1408 gcagcttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcg 1349

                                                                        
Query: 466  tcatactcatctataaccttgttcaaaattggttttaatgttctgcagggaccacatgtt 525
            |  |||||||||||||||||| | | |||||| ||||| |||||||| ||||||||||||
Sbjct: 1348 ttgtactcatctataaccttgcttagaattggctttaaggttctgcaaggaccacatgtt 1289

             
Query: 526  g 526
            |
Sbjct: 1288 g 1288



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>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full
            insert sequence
          Length = 1847

 Score =  218 bits (110), Expect = 1e-53
 Identities = 207/241 (85%)
 Strand = Plus / Minus

                                                                        
Query: 286  tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacaccaaan 345
            |||| ||||||||| ||||| || || ||||  |||||||||||||| || |||||| | 
Sbjct: 1578 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacaccagag 1519

                                                                        
Query: 346  aaagncctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcct 405
            | || ||||| ||||||||| |||||||| || |||||||| ||||||||||||||||||
Sbjct: 1518 acagtcctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcct 1459

                                                                        
Query: 406  gcagcttctgctntttcagggncctnttcaatgtcaatttcaacaaaatgaacgtattcg 465
            |||||||||||| |||||||  |||  || ||||||||||| ||||||||||||| ||||
Sbjct: 1458 gcagcttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcg 1399

                                                                        
Query: 466  tcatactcatctataaccttgttcaaaattggttttaatgttctgcagggaccacatgtt 525
            |  |||||||||||||||||| | | |||||| ||||| |||||||| ||||||||||||
Sbjct: 1398 ttgtactcatctataaccttgcttagaattggctttaaggttctgcaaggaccacatgtt 1339

             
Query: 526  g 526
            |
Sbjct: 1338 g 1338



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  153 bits (77), Expect = 7e-34
 Identities = 119/134 (88%)
 Strand = Plus / Minus

                                                                            
Query: 351      cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 410
                ||||| ||||||||| |||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 27645126 cctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcctgcagc 27645067

                                                                            
Query: 411      ttctgctntttcagggncctnttcaatgtcaatttcaacaaaatgaacgtattcgtcata 470
                ||||||| |||||||  |||  || ||||||||||| ||||||||||||| |||||  ||
Sbjct: 27645066 ttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcgttgta 27645007

                              
Query: 471      ctcatctataacct 484
                ||||||||||||||
Sbjct: 27645006 ctcatctataacct 27644993



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 492      aattggttttaatgttctgcagggaccacatgttg 526
                |||||| ||||| |||||||| |||||||||||||
Sbjct: 27644543 aattggctttaaggttctgcaaggaccacatgttg 27644509



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                         
Query: 286      tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacacca 342
                |||| ||||||||| ||||| || || ||||  |||||||||||||| || ||||||
Sbjct: 27645314 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacacca 27645258



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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0047B07
          Length = 157797

 Score =  153 bits (77), Expect = 7e-34
 Identities = 119/134 (88%)
 Strand = Plus / Minus

                                                                          
Query: 351    cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 410
              ||||| ||||||||| |||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 102119 cctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcctgcagc 102060

                                                                          
Query: 411    ttctgctntttcagggncctnttcaatgtcaatttcaacaaaatgaacgtattcgtcata 470
              ||||||| |||||||  |||  || ||||||||||| ||||||||||||| |||||  ||
Sbjct: 102059 ttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcgttgta 102000

                            
Query: 471    ctcatctataacct 484
              ||||||||||||||
Sbjct: 101999 ctcatctataacct 101986



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 492    aattggttttaatgttctgcagggaccacatgttg 526
              |||||| ||||| |||||||| |||||||||||||
Sbjct: 101536 aattggctttaaggttctgcaaggaccacatgttg 101502



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 286    tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacacca 342
              |||| ||||||||| ||||| || || ||||  |||||||||||||| || ||||||
Sbjct: 102307 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacacca 102251



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>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1477_F01
          Length = 158792

 Score =  153 bits (77), Expect = 7e-34
 Identities = 119/134 (88%)
 Strand = Plus / Minus

                                                                         
Query: 351   cctgatcatttctttgtttttaaagaactgaacacaaggtgttcccatgatgcctgcagc 410
             ||||| ||||||||| |||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 24228 cctgagcatttctttatttttaaaaaattgaacacatggtgttcccatgatgcctgcagc 24169

                                                                         
Query: 411   ttctgctntttcagggncctnttcaatgtcaatttcaacaaaatgaacgtattcgtcata 470
             ||||||| |||||||  |||  || ||||||||||| ||||||||||||| |||||  ||
Sbjct: 24168 ttctgctatttcaggatcctcctcgatgtcaatttcgacaaaatgaacgtgttcgttgta 24109

                           
Query: 471   ctcatctataacct 484
             ||||||||||||||
Sbjct: 24108 ctcatctataacct 24095



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 492   aattggttttaatgttctgcagggaccacatgttg 526
             |||||| ||||| |||||||| |||||||||||||
Sbjct: 23645 aattggctttaaggttctgcaaggaccacatgttg 23611



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 286   tcagatcatttgttcgactcaatgaattcccggtattccttcttcatcttcacacca 342
             |||| ||||||||| ||||| || || ||||  |||||||||||||| || ||||||
Sbjct: 24416 tcagctcatttgtttgactcgataaactccctatattccttcttcattttaacacca 24360



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>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron transporter/
            oxidoreductase/ thioredoxin-disulfide reductase AT2G41680
            mRNA, complete cds
          Length = 1800

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
            |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 1594 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1535

                                                
Query: 363  tttgtttttaaagaactgaacacaaggtgttcccat 398
             ||||| || |||||||| ||||| || ||||||||
Sbjct: 1534 cttgttcttgaagaactgcacacatggggttcccat 1499



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>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase
            (At2g41680/T32G6.20) mRNA, complete cds
          Length = 1590

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
            |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 1578 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1519

                                                
Query: 363  tttgtttttaaagaactgaacacaaggtgttcccat 398
             ||||| || |||||||| ||||| || ||||||||
Sbjct: 1518 cttgttcttgaagaactgcacacatggggttcccat 1483



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>gb|AY093250.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680)
           mRNA, complete cds
          Length = 803

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                       
Query: 303 ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
           |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 684 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 625

                                               
Query: 363 tttgtttttaaagaactgaacacaaggtgttcccat 398
            ||||| || |||||||| ||||| || ||||||||
Sbjct: 624 cttgttcttgaagaactgcacacatggggttcccat 589



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>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680;
            T32G6.20) mRNA, complete cds
          Length = 1802

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
            |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 1611 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1552

                                                
Query: 363  tttgtttttaaagaactgaacacaaggtgttcccat 398
             ||||| || |||||||| ||||| || ||||||||
Sbjct: 1551 cttgttcttgaagaactgcacacatggggttcccat 1516



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>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds
          Length = 1783

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
            |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 1591 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1532

                                                
Query: 363  tttgtttttaaagaactgaacacaaggtgttcccat 398
             ||||| || |||||||| ||||| || ||||||||
Sbjct: 1531 cttgttcttgaagaactgcacacatggggttcccat 1496



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>emb|BX821094.1|CNS0A9Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL14ZD09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 644

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                       
Query: 303 ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
           |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 465 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 406

                                               
Query: 363 tttgtttttaaagaactgaacacaaggtgttcccat 398
            ||||| || |||||||| ||||| || ||||||||
Sbjct: 405 cttgttcttgaagaactgcacacatggggttcccat 370



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>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1726

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
            |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 1584 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1525

                                                
Query: 363  tttgtttttaaagaactgaacacaaggtgttcccat 398
             ||||| || |||||||| ||||| || ||||||||
Sbjct: 1524 cttgttcttgaagaactgcacacatggggttcccat 1489



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>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS42ZF11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1356

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacaccaaanaaagncctgatcatttc 362
            |||||||||||| ||||| || |||||||||||||||||  | | || ||||| ||||||
Sbjct: 1221 ctcaatgaattctcggtactctttcttcatcttcacacccgatatagtcctgagcatttc 1162

                                                
Query: 363  tttgtttttaaagaactgaacacaaggtgttcccat 398
             ||||| || |||||||| ||||| || ||||||||
Sbjct: 1161 cttgttcttgaagaactgcacacatggggttcccat 1126



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>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete
             sequence
          Length = 91979

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 303   ctcaatgaattcccggtattccttcttcatcttcacacc 341
             |||||||||||| ||||| || |||||||||||||||||
Sbjct: 77252 ctcaatgaattctcggtactctttcttcatcttcacacc 77290



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>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS78ZB05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1730

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 303  ctcaatgaattcccggtattccttcttcatcttcacacc 341
            |||||||||||| ||||| || |||||||||||||||||
Sbjct: 1595 ctcaatgaattctcggtactctttcttcatcttcacacc 1557



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>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete
              sequence
          Length = 208746

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 359    tttctttgtttttaaagaactg 380
              ||||||||||||||||||||||
Sbjct: 155160 tttctttgtttttaaagaactg 155139



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>emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in linkage group 1,
             complete sequence
          Length = 194021

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 359   tttctttgtttttaaagaactg 380
             ||||||||||||||||||||||
Sbjct: 80207 tttctttgtttttaaagaactg 80186



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>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete
              sequence
          Length = 230161

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 275    aaacaatgagctcagatcattt 296
              ||||||||||||||||||||||
Sbjct: 157506 aaacaatgagctcagatcattt 157485



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>gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosome 7, complete sequence
          Length = 198504

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 357   catttctttgtttttaaagaa 377
             |||||||||||||||||||||
Sbjct: 35006 catttctttgtttttaaagaa 34986



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>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence
          Length = 215112

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 357    catttctttgtttttaaagaa 377
              |||||||||||||||||||||
Sbjct: 169343 catttctttgtttttaaagaa 169363



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>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence
          Length = 178055

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 357    catttctttgtttttaaagaa 377
              |||||||||||||||||||||
Sbjct: 122727 catttctttgtttttaaagaa 122707



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>gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosome 16, complete
             sequence
          Length = 147166

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   catttctttgtttttaaagaa 377
             |||||||||||||||||||||
Sbjct: 74806 catttctttgtttttaaagaa 74826



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>emb|AL139101.13| Human DNA sequence from clone RP3-414L4 on chromosome 6 Contains the 3'
             end of the TIAM2 gene for T-cell lymphoma invasion and
             metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)),
             the CLDN20 gene for claudin 20, the TFB1M gene for
             transcription factor B1, mitochondrial (CGI-75 protein
             homolog of yeast mitochondrial transcription factor BCGI75
             (mtTFB, CGI-75)), the 5' end of a novel gene and two CpG
             islands, complete sequence
          Length = 116256

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   cattacacttcaaaaccctgg 271
             |||||||||||||||||||||
Sbjct: 45642 cattacacttcaaaaccctgg 45662



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>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete
             sequence
          Length = 218059

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   catttctttgtttttaaagaa 377
             |||||||||||||||||||||
Sbjct: 48963 catttctttgtttttaaagaa 48983



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>gb|AC159823.2| Mus musculus BAC clone RP23-113F14 from chromosome 12, complete sequence
          Length = 212532

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 357    catttctttgtttttaaagaa 377
              |||||||||||||||||||||
Sbjct: 126137 catttctttgtttttaaagaa 126157



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>gb|AC151897.3| Mus musculus BAC clone RP24-257D11 from chromosome 7, complete sequence
          Length = 222313

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 357   catttctttgtttttaaagaa 377
             |||||||||||||||||||||
Sbjct: 53521 catttctttgtttttaaagaa 53541



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>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 355     atcatttctttgtttttaaag 375
               |||||||||||||||||||||
Sbjct: 1919040 atcatttctttgtttttaaag 1919060



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>gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, complete sequence
          Length = 188444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 357    catttctttgtttttaaagaa 377
              |||||||||||||||||||||
Sbjct: 128378 catttctttgtttttaaagaa 128398



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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
              sequence
          Length = 201671

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    atttctttgtttttaaagaac 378
              |||||||||||||||||||||
Sbjct: 133191 atttctttgtttttaaagaac 133211



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>gb|AC118628.11| Mus musculus chromosome 19, clone RP24-92P15, complete sequence
          Length = 202071

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   atttctttgtttttaaagaa 377
             ||||||||||||||||||||
Sbjct: 61722 atttctttgtttttaaagaa 61741



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>gb|AC148991.2| Mus musculus BAC clone RP23-52N2 from chromosome 19, complete sequence
          Length = 221043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    atttctttgtttttaaagaa 377
              ||||||||||||||||||||
Sbjct: 166947 atttctttgtttttaaagaa 166966



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>gb|AC166290.7| Mus musculus  BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 242055

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    atttctttgtttttaaagaa 377
              ||||||||||||||||||||
Sbjct: 132808 atttctttgtttttaaagaa 132827



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>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete
             sequence
          Length = 217490

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   atttctttgtttttaaagaa 377
             ||||||||||||||||||||
Sbjct: 53804 atttctttgtttttaaagaa 53823



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>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16,
             complete sequence
          Length = 152450

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 483   cttgttcaaaattggtttta 502
             ||||||||||||||||||||
Sbjct: 72407 cttgttcaaaattggtttta 72426



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>gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosome 18, complete sequence
          Length = 194843

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    catttctttgtttttaaaga 376
              ||||||||||||||||||||
Sbjct: 174995 catttctttgtttttaaaga 175014



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>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete
             sequence
          Length = 186091

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   ctttgtttttaaagaactga 381
             ||||||||||||||||||||
Sbjct: 55211 ctttgtttttaaagaactga 55192



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>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence
          Length = 279112

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   atttctttgtttttaaagaa 377
             ||||||||||||||||||||
Sbjct: 54170 atttctttgtttttaaagaa 54151



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>ref|XM_720110.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome ATPase (PY00544)
            partial mRNA
          Length = 1911

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  tctataaccttgttcaaaat 494
            ||||||||||||||||||||
Sbjct: 1863 tctataaccttgttcaaaat 1844



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>ref|XM_736359.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302617.00.0)
           partial mRNA
          Length = 309

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tctataaccttgttcaaaat 494
           ||||||||||||||||||||
Sbjct: 261 tctataaccttgttcaaaat 242



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>gb|U70857.2| Caenorhabditis elegans cosmid C10G8, complete sequence
          Length = 30826

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 432   ttcaatgtcaatttcaacaaaatg 455
             ||||||||||||||||| ||||||
Sbjct: 24196 ttcaatgtcaatttcaataaaatg 24173



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>gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete sequence
          Length = 127300

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   cttcttcatcttcacaccaa 343
             ||||||||||||||||||||
Sbjct: 30677 cttcttcatcttcacaccaa 30658



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>ref|XM_791044.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC591484 (LOC591484), mRNA
          Length = 702

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 321 ttccttcttcatcttcacaccaaa 344
           |||||||| |||||||||||||||
Sbjct: 369 ttccttctgcatcttcacaccaaa 392



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>emb|AL109809.18|HSJ673D20 Human DNA sequence from clone RP4-673D20 on chromosome 20 Contains a
             PTPNS (protein tyrosine phosphatase, non-receptor type
             substrate) family pseudogene, the 5' end of the SIRPB2
             gene for signal-regulatory protein beta 2 and a CpG
             island, complete sequence
          Length = 132396

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tttgtttttaaagaactgaa 382
             ||||||||||||||||||||
Sbjct: 17164 tttgtttttaaagaactgaa 17145



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>emb|CR627485.10| Zebrafish DNA sequence from clone DKEY-203E10 in linkage group 7,
              complete sequence
          Length = 180774

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    tttctttgtttttaaagaac 378
              ||||||||||||||||||||
Sbjct: 162287 tttctttgtttttaaagaac 162306



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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 445     tcaacaaaatgaacgtattc 464
               ||||||||||||||||||||
Sbjct: 1380559 tcaacaaaatgaacgtattc 1380540



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>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete
             sequence
          Length = 204676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   catttctttgtttttaaaga 376
             ||||||||||||||||||||
Sbjct: 49426 catttctttgtttttaaaga 49445



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>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete
             sequence
          Length = 176577

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   cttcaaaaccctgggacaaa 277
             ||||||||||||||||||||
Sbjct: 38484 cttcaaaaccctgggacaaa 38465



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>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence
          Length = 129203

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    tattccttcttcatcttcac 338
              ||||||||||||||||||||
Sbjct: 101285 tattccttcttcatcttcac 101304



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>gb|AC009509.7| Homo sapiens 12p11-37.2-54.4 BAC RP11-1060J15 (Roswell Park Cancer
              Institute Human BAC Library) complete sequence
          Length = 192690

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    cccatgatgcctgcagcttc 413
              ||||||||||||||||||||
Sbjct: 114259 cccatgatgcctgcagcttc 114278



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>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence
          Length = 187067

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   atttctttgtttttaaagaa 377
             ||||||||||||||||||||
Sbjct: 16181 atttctttgtttttaaagaa 16200



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>gb|AC093479.13| Mus musculus chromosome 16, clone RP23-61K2, complete sequence
          Length = 243771

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atttctttgtttttaaagaa 377
            ||||||||||||||||||||
Sbjct: 5460 atttctttgtttttaaagaa 5479



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>dbj|AK139136.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730042N09
            product:unclassifiable, full insert sequence
          Length = 2903

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atttctttgtttttaaagaa 377
            ||||||||||||||||||||
Sbjct: 1155 atttctttgtttttaaagaa 1174



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>gb|AC160059.7| Mus musculus 6 BAC RP23-172L21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212292

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    tgttcccatgatgcctgcag 409
              ||||||||||||||||||||
Sbjct: 104408 tgttcccatgatgcctgcag 104389



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>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence
          Length = 204567

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   catttctttgtttttaaaga 376
             ||||||||||||||||||||
Sbjct: 30123 catttctttgtttttaaaga 30142



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>gb|AC152959.2| Mus musculus 6 BAC RP23-78B5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206857

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   tgttcccatgatgcctgcag 409
             ||||||||||||||||||||
Sbjct: 47835 tgttcccatgatgcctgcag 47854



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>dbj|AK038447.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230013C15 product:unclassifiable, full
            insert sequence
          Length = 3386

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  atttctttgtttttaaagaa 377
            ||||||||||||||||||||
Sbjct: 3059 atttctttgtttttaaagaa 3078



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>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence
          Length = 223346

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cctgatcatttctttgtttt 370
              ||||||||||||||||||||
Sbjct: 135443 cctgatcatttctttgtttt 135462



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>gb|AC138821.2| Homo sapiens chromosome 5 clone RP11-1104E16, complete sequence
          Length = 182236

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 cctgatcatttctttgtttt 370
           ||||||||||||||||||||
Sbjct: 689 cctgatcatttctttgtttt 708



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>gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, complete sequence
          Length = 151635

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cctgatcatttctttgtttt 370
              ||||||||||||||||||||
Sbjct: 143175 cctgatcatttctttgtttt 143194



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>gb|AC092177.4| Homo sapiens BAC clone RP11-69D8 from 2, complete sequence
          Length = 100132

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 353   tgatcatttctttgtttttaaaga 376
             |||||||||||||||||| |||||
Sbjct: 19630 tgatcatttctttgttttaaaaga 19653



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>gb|AC138317.11| Mus musculus chromosome 8, clone RP23-271F20, complete sequence
          Length = 205957

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    aggtgttcccatgatgcctg 406
              ||||||||||||||||||||
Sbjct: 171122 aggtgttcccatgatgcctg 171103



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>gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, complete sequence
          Length = 180681

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    tgatcatttctttgttttta 372
              ||||||||||||||||||||
Sbjct: 121706 tgatcatttctttgttttta 121725



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>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence
          Length = 197546

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   catttctttgtttttaaaga 376
             ||||||||||||||||||||
Sbjct: 72509 catttctttgtttttaaaga 72490



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>gb|AC162949.7| Mus musculus BAC clone RP23-8D10 from chromosome 8, complete sequence
          Length = 228830

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   tgagctcagatcatttgttc 300
             ||||||||||||||||||||
Sbjct: 46257 tgagctcagatcatttgttc 46238



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>emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chromosome 4, complete
             sequence
          Length = 195937

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   atttctttgtttttaaagaa 377
             ||||||||||||||||||||
Sbjct: 29593 atttctttgtttttaaagaa 29612


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,430,136
Number of Sequences: 3902068
Number of extensions: 4430136
Number of successful extensions: 99442
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99248
Number of HSP's gapped (non-prelim): 186
length of query: 526
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 503
effective length of database: 17,143,297,704
effective search space: 8623078745112
effective search space used: 8623078745112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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