| Clone Name | rbaal10j23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DHB2_RAT (Q62730) Estradiol 17-beta-dehydrogenase 2 (EC 1.1.1.62... | 30 | 5.3 | 2 | DECA_DROSI (P91706) Protein decapentaplegic precursor (Protein D... | 30 | 6.9 | 3 | OXYR_PIG (P32306) Oxytocin receptor (OT-R) | 30 | 9.1 | 4 | OXYR_MACMU (P56494) Oxytocin receptor (OT-R) | 30 | 9.1 | 5 | OXYR_RAT (P70536) Oxytocin receptor (OT-R) | 30 | 9.1 | 6 | OXYR_MOUSE (P97926) Oxytocin receptor (OT-R) | 30 | 9.1 | 7 | OXYR_BOVIN (P56449) Oxytocin receptor (OT-R) | 30 | 9.1 |
|---|
>DHB2_RAT (Q62730) Estradiol 17-beta-dehydrogenase 2 (EC 1.1.1.62)| (17-beta-HSD 2) (17-beta-hydroxysteroid dehydrogenase 2) Length = 381 Score = 30.4 bits (67), Expect = 5.3 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Frame = -1 Query: 604 LCICATSAIKPPFLLLVISYFRKHGELVKFY------CFLSVAVLCDVDHITISCQLLFT 443 LC+ AT+ + L S + ++V C LS+++LC + +++SC L Sbjct: 11 LCLTATAVLGGMLLCKAWSSGQLRSQVVCLAGLWGGACLLSLSLLCSLFLLSVSCFFLLY 70 Query: 442 VVSSDKSAHP 413 V SSD+ P Sbjct: 71 VSSSDQDLLP 80
>DECA_DROSI (P91706) Protein decapentaplegic precursor (Protein DPP-C)| Length = 593 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 40 NEHQATSFKEQRLHFKTSLNYRES*HLFASSSTRG*HQLPQKASVFI 180 N H + KEQR H K S ++R AS+ST HQ S+F+ Sbjct: 134 NNHNKMAVKEQRSHHKKSHHHRSHQPKQASASTES-HQSSSIESIFV 179
>OXYR_PIG (P32306) Oxytocin receptor (OT-R)| Length = 386 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -2 Query: 510 VFCQLLFYVM*IILLFPVSCCLLL*VQINQHTHQKHGKYNLDIAILCLLVARFRSQPL-- 337 V C +LF L + C+LL ++ +H H + + ++I L+VA F+ P Sbjct: 45 VLCLILF------LALSGNACVLLALRTTRHKHSRLFFFMKHLSIADLVVAVFQVLPQLL 98 Query: 336 --TTLRSLGFERITYMSKYFEVTG 271 T R G + + + KY +V G Sbjct: 99 WDITFRFYGPDLLCRLVKYLQVVG 122
>OXYR_MACMU (P56494) Oxytocin receptor (OT-R)| Length = 389 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -2 Query: 510 VFCQLLFYVM*IILLFPVSCCLLL*VQINQHTHQKHGKYNLDIAILCLLVARFRSQPL-- 337 V C +LF L + C+LL ++ +H H + + ++I L+VA F+ P Sbjct: 45 VLCLILF------LALSGNACVLLALRTTRHKHSRLFFFMKHLSIADLVVAVFQVLPQLL 98 Query: 336 --TTLRSLGFERITYMSKYFEVTG 271 T R G + + + KY +V G Sbjct: 99 WDITFRFYGPDLLCRLVKYLQVVG 122
>OXYR_RAT (P70536) Oxytocin receptor (OT-R)| Length = 388 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -2 Query: 510 VFCQLLFYVM*IILLFPVSCCLLL*VQINQHTHQKHGKYNLDIAILCLLVARFRSQPL-- 337 V C +LF L + C+LL ++ +H H + + ++I L+VA F+ P Sbjct: 45 VLCLILF------LALSGNACVLLALRTTRHKHSRLFFFMKHLSIADLVVAVFQVLPQLL 98 Query: 336 --TTLRSLGFERITYMSKYFEVTG 271 T R G + + + KY +V G Sbjct: 99 WDITFRFYGPDLLCRLVKYLQVVG 122
>OXYR_MOUSE (P97926) Oxytocin receptor (OT-R)| Length = 388 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -2 Query: 510 VFCQLLFYVM*IILLFPVSCCLLL*VQINQHTHQKHGKYNLDIAILCLLVARFRSQPL-- 337 V C +LF L + C+LL ++ +H H + + ++I L+VA F+ P Sbjct: 45 VLCLILF------LALSGNACVLLALRTTRHKHSRLFFFMKHLSIADLVVAVFQVLPQLL 98 Query: 336 --TTLRSLGFERITYMSKYFEVTG 271 T R G + + + KY +V G Sbjct: 99 WDITFRFYGPDLLCRLVKYLQVVG 122
>OXYR_BOVIN (P56449) Oxytocin receptor (OT-R)| Length = 391 Score = 29.6 bits (65), Expect = 9.1 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = -2 Query: 510 VFCQLLFYVM*IILLFPVSCCLLL*VQINQHTHQKHGKYNLDIAILCLLVARFRSQPL-- 337 V C +LF L + C+LL ++ +H H + + ++I L+VA F+ P Sbjct: 45 VLCLILF------LALSGNACVLLALRTTRHKHSRLFFFMKHLSIADLVVAVFQVLPQLL 98 Query: 336 --TTLRSLGFERITYMSKYFEVTG 271 T R G + + + KY +V G Sbjct: 99 WDITFRFYGPDLLCRLVKYLQVVG 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,958,189 Number of Sequences: 219361 Number of extensions: 1620658 Number of successful extensions: 3984 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3984 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)