>FABH_PORPU (P51196) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 326

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +1

Query: 439 WLTTPSGGSHSHWLSDSKEATYFAILAANDFLSPACLL*SILNFIACFSRT--SIQSKAR 612
           W++T +G    H    S   T  A  AAND LS A +    ++ I   + T   +   A 
Sbjct: 32  WISTRTGIKKRHLAPSSTSLTKLAAEAANDALSKASINAEDIDLIILATSTPDDLFGSAS 91

Query: 613 SYSIVLG*EQCDVDTAFFCSSRCLGFIF*LL 705
                +G       TAF  ++ C GFI  L+
Sbjct: 92  QLQAEIG---ATSSTAFDITAACSGFIIALV 119

>CIAS1_MOUSE (Q8R4B8) Cold autoinflammatory syndrome 1 protein homolog|
           (PYRIN-containing APAF1-like protein 1) (Mast cell
           maturation-associated inducible protein 1) (Cryopyrin)
          Length = 1033

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +3

Query: 459 RFPFPLVKRFQRSYLLRHLGCKRLPLTRVPLMKYTELHCLLFSDKHPIQGQIIFYCV 629
           RF F LV + + SYL + L CK     R+ L+K+ E+       +       +FYC+
Sbjct: 576 RFLFGLVNQERTSYLEKKLSCKISQQVRLELLKWIEVKAKAKKLQWQPSQLELFYCL 632

>CIAS1_HUMAN (Q96P20) Cold autoinflammatory syndrome 1 protein (Cryopyrin)|
           (NACHT-, LRR- and PYD-containing protein 3)
           (PYRIN-containing APAF1-like protein 1)
           (Angiotensin/vasopressin receptor AII/AVP-like)
          Length = 1034

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +3

Query: 459 RFPFPLVKRFQRSYLLRHLGCKRLPLTRVPLMKYTELHCLLFSDKHPIQ-GQI-IFYCV 629
           RF F LV + + SYL + L CK     R+ L+K+ E+     + K  IQ  Q+ +FYC+
Sbjct: 576 RFLFGLVNQERTSYLEKKLSCKISQQIRLELLKWIEVKAK--AKKLQIQPSQLELFYCL 632


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,683,907
Number of Sequences: 219361
Number of extensions: 2000421
Number of successful extensions: 4414
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4414
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)