ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10j17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Ab... 31 3.4
2ANGI_PAPHA (Q8WN64) Angiogenin precursor (EC 3.1.27.-) (Ribonucl... 30 4.5
3TILS_TREPA (O83388) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 30 5.8
4ABL_CALVI (P11681) Tyrosine-protein kinase ABL (EC 2.7.10.2) (Fr... 30 7.6
5PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase ... 30 7.6
6MRP4_ARATH (Q7DM58) Multidrug resistance-associated protein 4 (E... 30 7.6
7PTPR2_HUMAN (Q92932) Receptor-type tyrosine-protein phosphatase ... 29 10.0
8MUSK_HUMAN (O15146) Muscle, skeletal receptor tyrosine protein k... 29 10.0

>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson|
           protein) (D-ash)
          Length = 1620

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -3

Query: 621 EVAAALSYLSSQTYNGNDAAGRRCLDGPS-TPKVSE---EQVNQDDALPSQLGAQ 469
           ++A+ +SYL S+ Y   D A R CL G +   KV++    ++ +DD   +  GA+
Sbjct: 475 QIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAK 529



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>ANGI_PAPHA (Q8WN64) Angiogenin precursor (EC 3.1.27.-) (Ribonuclease 5) (RNase|
           5)
          Length = 146

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
 Frame = +3

Query: 297 LPSHGVSKPRPRHSRLQVRGLGRRHLEQPC----PVLHDWSHSCNALFLLE*SHSYG--- 455
           L  H    P  R+ R     + RRHL  PC      +H   H  NA+   E  + YG   
Sbjct: 34  LAKHYDGTPEGRNDRYCESTMRRRHLTSPCKDTNTFIHGNRHHINAICGDENGNPYGGNL 93

Query: 456 HASMFELQVD*AKHHLG*PAP 518
             S    QV   K H G P P
Sbjct: 94  RISKSPFQVTTCKLHGGSPRP 114



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>TILS_TREPA (O83388) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 477

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 238 KPQAELSSLSKDFIGYTHFACLLMASPSLGPDIRVCKCAVSVD 366
           KP   L ++S    G      LL A+  L PD  VC CAV+VD
Sbjct: 27  KPSCLLVAVS----GGADSLALLYAAHELAPDFGVCACAVTVD 65



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>ABL_CALVI (P11681) Tyrosine-protein kinase ABL (EC 2.7.10.2) (Fragment)|
          Length = 74

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -3

Query: 621 EVAAALSYLSSQTYNGNDAAGRRCLDGPS-TPKVSE---EQVNQDDALPSQLGAQ 469
           ++A+ +SYL ++ Y   D A R CL G +   KV++    ++ +DD   +  GA+
Sbjct: 15  QIASGMSYLEARNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAK 69



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>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor (EC|
            3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein tyrosine
            phosphatase-NP) (PTP-NP)
          Length = 1001

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 18/134 (13%)
 Frame = +1

Query: 190  YSSSPNNAFFKIASMPKPQAELSSLSKDFIGYTHFACLLMASPSLGPDIRVCKCAVSVDA 369
            Y + PN++   +A   +   +  SL+   + Y H   LL +  S G    +    + +D 
Sbjct: 741  YQAEPNSSL--VAQREENAPKNRSLA--VLTYDHSRILLKSQNSHGSSDYINASPI-MDH 795

Query: 370  IWNNPAPYSTIGATPAMLFSFWNEVIHT-----VMHRCLSSKLTRQ-------------S 495
               NPA  +T G  PA +  FW  V  +     VM   LS    RQ              
Sbjct: 796  DPRNPAYIATQGPLPATVADFWQMVWESGCAVIVMLTPLSENGVRQCHHYWPDEGSNLYH 855

Query: 496  IILVNLLL*HFWCR 537
            +  VNL+  H WC+
Sbjct: 856  VYEVNLVSEHIWCQ 869



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>MRP4_ARATH (Q7DM58) Multidrug resistance-associated protein 4 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 4)
           (ATP-energized glutathione S-conjugate pump 4)
          Length = 1516

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +1

Query: 316 PSLGPDIRVCKCAVSVDAIWNNPAPYSTIGATPAMLFSFWNEVIHTVM 459
           P+L P+ +  + A+  ++ W  P+  S+      +L  FW E++ T +
Sbjct: 284 PTLSPEHKAERLALLFESSWPKPSENSSHPIRTTLLRCFWKEILFTAI 331



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>PTPR2_HUMAN (Q92932) Receptor-type tyrosine-protein phosphatase N2 precursor (EC|
            3.1.3.48) (R-PTP-N2) (Islet cell autoantigen-related
            protein) (ICAAR) (IAR) (Phogrin)
          Length = 1015

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 18/133 (13%)
 Frame = +1

Query: 190  YSSSPNNAFFKIASMPKPQAELSSLSKDFIGYTHFACLLMASPSLGPDIRVCKCAVSVDA 369
            Y + PN++F  +A   +   +  SL+   + Y H   LL A  S      +    + +D 
Sbjct: 755  YQAEPNSSF--VAQREENVPKNRSLA--VLTYDHSRVLLKAENSHSHSDYINASPI-MDH 809

Query: 370  IWNNPAPYSTIGATPAMLFSFWNEV-----IHTVMHRCLSSKLTRQ-------------S 495
               NPA  +T G  PA +  FW  V     +  VM   L+    RQ              
Sbjct: 810  DPRNPAYIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGVRQCYHYWPDEGSNLYH 869

Query: 496  IILVNLLL*HFWC 534
            I  VNL+  H WC
Sbjct: 870  IYEVNLVSEHIWC 882



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>MUSK_HUMAN (O15146) Muscle, skeletal receptor tyrosine protein kinase|
           precursor (EC 2.7.10.1) (Muscle-specific tyrosine
           protein kinase receptor) (Muscle-specific kinase
           receptor) (MuSK)
          Length = 869

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 13/59 (22%)
 Frame = -3

Query: 624 REVAAALSYLSSQTYNGNDAAGRRCLDGPS-TPKVSE------------EQVNQDDALP 487
           R+VAA ++YLS + +   D A R CL G +   K+++             + N++DA+P
Sbjct: 707 RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKANENDAIP 765


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,050,232
Number of Sequences: 219361
Number of extensions: 1913354
Number of successful extensions: 4935
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4935
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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