ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal10j16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105249.1| Zea mays PCO118287 mRNA sequence Length = 1328 Score = 636 bits (321), Expect = e-179 Identities = 513/577 (88%) Strand = Plus / Minus Query: 110 gcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtcct 169 ||||| ||||| ||||||||||| || ||||| ||||| || |||||||||||||||||| Sbjct: 1129 gcagcaacaggaagcaagccgttttgtctaagaagtggttcaggcgaaggctcccgtcct 1070 Query: 170 cggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgtttct 229 ||||| | ||||| ||||| || ||||| |||||||||||||| |||||||| || ||| Sbjct: 1069 cggaatgaaacgaacacctcaagcggagactttccacctccaagcgcaagaacagtgtct 1010 Query: 230 ctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaaat 289 |||||||||||||| || ||||| || |||||||||| ||||| |||||| |||||||| Sbjct: 1009 ctgaatcgtctgccagtttcctcgattgccttctcatcatccaaaccagcgtcttcaaaa 950 Query: 290 gctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgca 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 949 gctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagcagca 890 Query: 350 tagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggagca 409 ||||||||||||||||| ||||| || | ||||||||||||||||| |||||||||||| Sbjct: 889 tagccacctgcaaaaatatggctaaagctgcacaggaatctgtcctccggcagaggagca 830 Query: 410 agaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccactt 469 ||||| || || ||||||||| ||| |||| |||||||||| ||||||| ||| | Sbjct: 829 agaacttgtgtccgttctgcaactctttggtccacatcatatatggacactgagccattg 770 Query: 470 ggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagactg 529 || |||||| ||||||| ||||||||||||||||| || || |||||||||||||| || Sbjct: 769 gggtcataacttgtatgaagctccatatctacactggcaaatcgtatctgacgcaggctc 710 Query: 530 aaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaaga 589 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 709 aaggtgccagcacggaaattctttgcagctacaagcttcgcataaatttcctctggaaga 650 Query: 590 ggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcaccag 649 | |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 649 gtttcaccggtttcataatgttttgcaatgctcaaaagagtattcttgtgatagcaccag 590 Query: 650 ttttccatgaactgagaaggtaactctacagcatccc 686 || ||||||||||| || ||||||||||||||||||| Sbjct: 589 ttctccatgaactgggagggtaactctacagcatccc 553
>ref|XM_468533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2511 Score = 601 bits (303), Expect = e-168 Identities = 510/579 (88%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 2327 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 2268 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 2267 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 2208 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 2207 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 2148 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2147 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 2088 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 2087 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 2028 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 2027 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 1968 Query: 468 ttggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagac 527 ||||||| ||||| |||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 1967 ttggatcgtaagtcgtatgcagctccatgtccacactagcaaaacgtatctgacgtaaac 1908 Query: 528 tgaaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaa 587 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1907 tgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaatttcctctggaa 1848 Query: 588 gaggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcacc 647 || |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 1847 gaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattcttgtggtagcacc 1788 Query: 648 agttttccatgaactgagaaggtaactctacagcatccc 686 |||| |||||||||||||| || | |||||||||||||| Sbjct: 1787 agttctccatgaactgagagggcagctctacagcatccc 1749
>dbj|AK103668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135L17, full insert sequence Length = 1787 Score = 601 bits (303), Expect = e-168 Identities = 510/579 (88%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 1603 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 1544 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 1543 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 1484 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 1483 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 1424 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1423 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 1364 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 1363 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 1304 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 1303 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 1244 Query: 468 ttggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagac 527 ||||||| ||||| |||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 1243 ttggatcgtaagtcgtatgcagctccatgtccacactagcaaaacgtatctgacgtaaac 1184 Query: 528 tgaaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaa 587 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1183 tgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaatttcctctggaa 1124 Query: 588 gaggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcacc 647 || |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 1123 gaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattcttgtggtagcacc 1064 Query: 648 agttttccatgaactgagaaggtaactctacagcatccc 686 |||| |||||||||||||| || | |||||||||||||| Sbjct: 1063 agttctccatgaactgagagggcagctctacagcatccc 1025
>dbj|AK101576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050K07, full insert sequence Length = 1690 Score = 601 bits (303), Expect = e-168 Identities = 510/579 (88%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 1506 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 1447 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 1446 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 1387 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 1386 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 1327 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1326 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 1267 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 1266 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 1207 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 1206 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 1147 Query: 468 ttggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagac 527 ||||||| ||||| |||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 1146 ttggatcgtaagtcgtatgcagctccatgtccacactagcaaaacgtatctgacgtaaac 1087 Query: 528 tgaaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaa 587 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1086 tgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaatttcctctggaa 1027 Query: 588 gaggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcacc 647 || |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 1026 gaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattcttgtggtagcacc 967 Query: 648 agttttccatgaactgagaaggtaactctacagcatccc 686 |||| |||||||||||||| || | |||||||||||||| Sbjct: 966 agttctccatgaactgagagggcagctctacagcatccc 928
>dbj|AK070094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040J23, full insert sequence Length = 2478 Score = 601 bits (303), Expect = e-168 Identities = 510/579 (88%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 2294 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 2235 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 2234 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 2175 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 2174 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 2115 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2114 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 2055 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 2054 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 1995 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 1994 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 1935 Query: 468 ttggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagac 527 ||||||| ||||| |||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 1934 ttggatcgtaagtcgtatgcagctccatgtccacactagcaaaacgtatctgacgtaaac 1875 Query: 528 tgaaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaa 587 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1874 tgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaatttcctctggaa 1815 Query: 588 gaggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcacc 647 || |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 1814 gaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattcttgtggtagcacc 1755 Query: 648 agttttccatgaactgagaaggtaactctacagcatccc 686 |||| |||||||||||||| || | |||||||||||||| Sbjct: 1754 agttctccatgaactgagagggcagctctacagcatccc 1716
>dbj|AK065077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K16, full insert sequence Length = 2511 Score = 601 bits (303), Expect = e-168 Identities = 510/579 (88%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 2327 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 2268 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 2267 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 2208 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 2207 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 2148 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2147 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 2088 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 2087 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 2028 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 2027 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 1968 Query: 468 ttggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagac 527 ||||||| ||||| |||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 1967 ttggatcgtaagtcgtatgcagctccatgtccacactagcaaaacgtatctgacgtaaac 1908 Query: 528 tgaaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaa 587 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1907 tgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaatttcctctggaa 1848 Query: 588 gaggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcacc 647 || |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 1847 gaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattcttgtggtagcacc 1788 Query: 648 agttttccatgaactgagaaggtaactctacagcatccc 686 |||| |||||||||||||| || | |||||||||||||| Sbjct: 1787 agttctccatgaactgagagggcagctctacagcatccc 1749
>dbj|AK059746.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-H11, full insert sequence Length = 1140 Score = 601 bits (303), Expect = e-168 Identities = 510/579 (88%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 956 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 897 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 896 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 837 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 836 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 777 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 776 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 717 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 716 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 657 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 656 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 597 Query: 468 ttggatcataagttgtatgcagctccatatctacacttgcgaaacgtatctgacgcagac 527 ||||||| ||||| |||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 596 ttggatcgtaagtcgtatgcagctccatgtccacactagcaaaacgtatctgacgtaaac 537 Query: 528 tgaaggtgccagcacggaaattctttgcagccacaagcttagcatagatttcctctggaa 587 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 536 tgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaatttcctctggaa 477 Query: 588 gaggttcatcggtttcataatgctttgctatgctcaaaagagtattcttgtgatagcacc 647 || |||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 476 gaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattcttgtggtagcacc 417 Query: 648 agttttccatgaactgagaaggtaactctacagcatccc 686 |||| |||||||||||||| || | |||||||||||||| Sbjct: 416 agttctccatgaactgagagggcagctctacagcatccc 378
>dbj|AK061671.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G04, full insert sequence Length = 501 Score = 359 bits (181), Expect = 8e-96 Identities = 343/397 (86%) Strand = Plus / Minus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| |||||||||||||||| |||||| ||||| | || || || |||||||||| Sbjct: 403 atgcagcaacaggtagcaagccgtcgtgcctgagcagagcttccggtgatggctcccgtc 344 Query: 168 ctcggaaagcgacgaaaacctcgagtggagattttccacctccaagtgcaagaaccgttt 227 | ||||||| || || ||||||||||||||||||||||||||||| ||||| || |||| Sbjct: 343 cgcggaaagacacaaacacctcgagtggagattttccacctccaagcgcaaggactgttt 284 Query: 228 ctctgaatcgtctgccggtctcctcaatggccttctcattatccagaccagcatcttcaa 287 |||||||||||||||| || |||||||| ||||||||||| |||| |||| | ||||||| Sbjct: 283 ctctgaatcgtctgccagtttcctcaattgccttctcattgtccaaaccaacgtcttcaa 224 Query: 288 atgctgagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctg 347 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 223 atgctgagaatgcatcagctgacaatacttcagcccacttgtaactgtagtatccagctg 164 Query: 348 catagccacctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggag 407 ||||||| |||||||| || ||||| || | ||||||||| | ||||| || ||||||| Sbjct: 163 catagcctcctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggag 104 Query: 408 caagaacctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccac 467 |||||||||| ||| || ||||| |||||||| |||||||||| |||| || ||| Sbjct: 103 caagaacctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccat 44 Query: 468 ttggatcataagttgtatgcagctccatatctacact 504 ||||||| ||||| || ||||||||||| || ||||| Sbjct: 43 ttggatcgtaagtcgtgtgcagctccatgtccacact 7
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 517 ctgacgcagactgaaggtgccagcacggaaattctttgcagccacaagcttagcatagat 576 |||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 35703254 ctgacgtaaactgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaat 35703313 Query: 577 ttcctctggaagaggttcatcggtttcataatgctttgctatgctcaaaagagtattc 634 ||||||||||||| |||| | ||||||||||||||||| |||||||||||||||||| Sbjct: 35703314 ttcctctggaagaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattc 35703371 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 185 acctcgagtggagattttccacctccaagtgcaagaaccgtttctctgaatcgtctgccg 244 ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 35702403 acctcgagtggagattttccacctccaagcgcaaggactgtttctctgaatcgtctgcca 35702462 Query: 245 gtctcctcaatggcct 260 || |||||||| |||| Sbjct: 35702463 gtttcctcaattgcct 35702478 Score = 97.6 bits (49), Expect = 5e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 355 acctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggagcaagaac 414 ||||||||| || ||||| || | ||||||||| | ||||| || |||||||||||||| Sbjct: 35702939 acctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggagcaagaac 35702998 Query: 415 ctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccacttggatc 474 ||| ||| || ||||| |||||||| |||||||||| |||| || ||| ||||||| Sbjct: 35702999 ctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccatttggatc 35703058 Query: 475 ataagttgtatgcagctccatatctacacttgcgaaacgtatctg 519 ||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 35703059 gtaagtcgtatgcagctccatgtccacactagcaaaacgtatctg 35703103 Score = 97.6 bits (49), Expect = 5e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 258 ccttctcattatccagaccagcatcttcaaatgctgagaatgcatcagctgacagtactt 317 |||||||||| |||| |||| | ||||||||||||||||||||||||||||||| ||||| Sbjct: 35702674 ccttctcattgtccaaaccaacgtcttcaaatgctgagaatgcatcagctgacaatactt 35702733 Query: 318 cagcccact 326 ||||||||| Sbjct: 35702734 cagcccact 35702742 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 634 cttgtgatagcaccagttttccatgaactgagaaggtaactctacagcatccc 686 |||||| ||||||||||| |||||||||||||| || | |||||||||||||| Sbjct: 35703452 cttgtggtagcaccagttctccatgaactgagagggcagctctacagcatccc 35703504 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 325 cttgtaactgtagtatccagctgcatagccacctgca 361 |||||||||||||||||||||||||||||| |||||| Sbjct: 35702826 cttgtaactgtagtatccagctgcatagcctcctgca 35702862 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 35702189 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 35702248 Query: 168 ctcggaaag 176 | ||||||| Sbjct: 35702249 cgcggaaag 35702257 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 aaaatgtggctgaatccaca 381 |||||||||||||||||||| Sbjct: 772644 aaaatgtggctgaatccaca 772663
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Plus Query: 517 ctgacgcagactgaaggtgccagcacggaaattctttgcagccacaagcttagcatagat 576 |||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 63868 ctgacgtaaactgaaggtgccagcacggaaattctttgcagcgacaagctttgcataaat 63927 Query: 577 ttcctctggaagaggttcatcggtttcataatgctttgctatgctcaaaagagtattc 634 ||||||||||||| |||| | ||||||||||||||||| |||||||||||||||||| Sbjct: 63928 ttcctctggaagaagttcgcctgtttcataatgctttgcaatgctcaaaagagtattc 63985 Score = 103 bits (52), Expect = 8e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 185 acctcgagtggagattttccacctccaagtgcaagaaccgtttctctgaatcgtctgccg 244 ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 63017 acctcgagtggagattttccacctccaagcgcaaggactgtttctctgaatcgtctgcca 63076 Query: 245 gtctcctcaatggcct 260 || |||||||| |||| Sbjct: 63077 gtttcctcaattgcct 63092 Score = 97.6 bits (49), Expect = 5e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 355 acctgcaaaaatgtggctgaatccacacaggaatctgtcctctggcagaggagcaagaac 414 ||||||||| || ||||| || | ||||||||| | ||||| || |||||||||||||| Sbjct: 63553 acctgcaaatatatggctaaagctgcacaggaatttatcctccggaagaggagcaagaac 63612 Query: 415 ctgggttttttctgcaacccttcggtcaacatcatatacagacactggtccacttggatc 474 ||| ||| || ||||| |||||||| |||||||||| |||| || ||| ||||||| Sbjct: 63613 ctgtgttcgctcagcaactcttcggtcgacatcatatatggacaatgaaccatttggatc 63672 Query: 475 ataagttgtatgcagctccatatctacacttgcgaaacgtatctg 519 ||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 63673 gtaagtcgtatgcagctccatgtccacactagcaaaacgtatctg 63717 Score = 97.6 bits (49), Expect = 5e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 258 ccttctcattatccagaccagcatcttcaaatgctgagaatgcatcagctgacagtactt 317 |||||||||| |||| |||| | ||||||||||||||||||||||||||||||| ||||| Sbjct: 63288 ccttctcattgtccaaaccaacgtcttcaaatgctgagaatgcatcagctgacaatactt 63347 Query: 318 cagcccact 326 ||||||||| Sbjct: 63348 cagcccact 63356 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 634 cttgtgatagcaccagttttccatgaactgagaaggtaactctacagcatccc 686 |||||| ||||||||||| |||||||||||||| || | |||||||||||||| Sbjct: 64066 cttgtggtagcaccagttctccatgaactgagagggcagctctacagcatccc 64118 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 325 cttgtaactgtagtatccagctgcatagccacctgca 361 |||||||||||||||||||||||||||||| |||||| Sbjct: 63440 cttgtaactgtagtatccagctgcatagcctcctgca 63476 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 108 atgcagcgacaggtagcaagccgttgtgcctaagcagtggctctggcgaaggctcccgtc 167 ||||||| ||||||||||||||||||||||| ||||| | || || || |||||||||| Sbjct: 62803 atgcagcaacaggtagcaagccgttgtgcctgagcagagcttccggtgatggctcccgtc 62862 Query: 168 ctcggaaag 176 | ||||||| Sbjct: 62863 cgcggaaag 62871
>ref|NM_125960.2| Arabidopsis thaliana metalloendopeptidase AT5G65620 mRNA, complete cds Length = 2918 Score = 107 bits (54), Expect = 5e-20 Identities = 105/122 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 ||||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||| Sbjct: 2204 ccagcgtcttcaaatgctgaaaatgcatcagcagacaaaacttctgcccacttgtaactg 2145 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatctgtcc 394 || |||||||||||||| || || ||||| ||||| ||||| | ||| || ||||| ||| Sbjct: 2144 taatatccagctgcatatcccccggcaaagatgtgactgaagctacagagaaatctatcc 2085 Query: 395 tc 396 || Sbjct: 2084 tc 2083
>gb|AY142682.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA, complete cds Length = 2407 Score = 107 bits (54), Expect = 5e-20 Identities = 105/122 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 ||||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||| Sbjct: 2201 ccagcgtcttcaaatgctgaaaatgcatcagcagacaaaacttctgcccacttgtaactg 2142 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatctgtcc 394 || |||||||||||||| || || ||||| ||||| ||||| | ||| || ||||| ||| Sbjct: 2141 taatatccagctgcatatcccccggcaaagatgtgactgaagctacagagaaatctatcc 2082 Query: 395 tc 396 || Sbjct: 2081 tc 2080
>gb|AY045936.1| Arabidopsis thaliana putative oligopeptidase A (At5g65620) mRNA, complete cds Length = 2510 Score = 107 bits (54), Expect = 5e-20 Identities = 105/122 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 ||||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||| Sbjct: 2204 ccagcgtcttcaaatgctgaaaatgcatcagcagacaaaacttctgcccacttgtaactg 2145 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatctgtcc 394 || |||||||||||||| || || ||||| ||||| ||||| | ||| || ||||| ||| Sbjct: 2144 taatatccagctgcatatcccccggcaaagatgtgactgaagctacagagaaatctatcc 2085 Query: 395 tc 396 || Sbjct: 2084 tc 2083
>ref|NM_121092.2| Arabidopsis thaliana metalloendopeptidase AT5G10540 mRNA, complete cds Length = 2825 Score = 103 bits (52), Expect = 8e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 |||||||||||||| ||||| || ||||| || |||| || || ||||||||||||||| Sbjct: 1964 ccagcatcttcaaaagctgaaaacgcatctgcagacaaaacctccgcccacttgtaactg 1905 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatct 390 ||||||||||||||||| ||||||||||| || || ||||| | ||| |||||||| Sbjct: 1904 tagtatccagctgcataaccacctgcaaatatatgactgaagctacagaggaatct 1849 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 599 gtttcataatgctttgctatgctcaaaagagtattcttgtgatagcaccagttttccatg 658 |||| ||||||||| || ||||||| | |||| | |||| ||||||||||| ||||| Sbjct: 1640 gtttgataatgcttagcaatgctcattaaggtatccctgtggtagcaccagttctccata 1581 Query: 659 aactgagaaggtaactctacagcatccc 686 ||||| || ||||| || || ||||||| Sbjct: 1580 aactgtgacggtaattcaactgcatccc 1553
>gb|AY050978.1| Arabidopsis thaliana putative oligopeptidase A (At5g10540) mRNA, complete cds Length = 2356 Score = 103 bits (52), Expect = 8e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 |||||||||||||| ||||| || ||||| || |||| || || ||||||||||||||| Sbjct: 1954 ccagcatcttcaaaagctgaaaacgcatctgcagacaaaacctccgcccacttgtaactg 1895 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatct 390 ||||||||||||||||| ||||||||||| || || ||||| | ||| |||||||| Sbjct: 1894 tagtatccagctgcataaccacctgcaaatatatgactgaagctacagaggaatct 1839 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 599 gtttcataatgctttgctatgctcaaaagagtattcttgtgatagcaccagttttccatg 658 |||| ||||||||| || ||||||| | |||| | |||| ||||||||||| ||||| Sbjct: 1630 gtttgataatgcttagcaatgctcattaaggtatccctgtggtagcaccagttctccata 1571 Query: 659 aactgagaaggtaactctacagcatccc 686 ||||| || ||||| || || ||||||| Sbjct: 1570 aactgtgacggtaattcaactgcatccc 1543
>emb|BX831351.1|CNS09YQG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2208 Score = 103 bits (52), Expect = 8e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 |||||||||||||| ||||| || ||||| || |||| || || ||||||||||||||| Sbjct: 1951 ccagcatcttcaaaagctgaaaacgcatctgcagacaaaacctccgcccacttgtaactg 1892 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatct 390 ||||||||||||||||| ||||||||||| || || ||||| | ||| |||||||| Sbjct: 1891 tagtatccagctgcataaccacctgcaaatatatgactgaagctacagaggaatct 1836
>gb|BT002369.1| Arabidopsis thaliana clone U10217 putative oligopeptidase A (At5g10540) mRNA, complete cds Length = 2137 Score = 103 bits (52), Expect = 8e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 |||||||||||||| ||||| || ||||| || |||| || || ||||||||||||||| Sbjct: 1937 ccagcatcttcaaaagctgaaaacgcatctgcagacaaaacctccgcccacttgtaactg 1878 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaatct 390 ||||||||||||||||| ||||||||||| || || ||||| | ||| |||||||| Sbjct: 1877 tagtatccagctgcataaccacctgcaaatatatgactgaagctacagaggaatct 1822 Score = 40.1 bits (20), Expect = 9.4 Identities = 71/88 (80%) Strand = Plus / Minus Query: 599 gtttcataatgctttgctatgctcaaaagagtattcttgtgatagcaccagttttccatg 658 |||| ||||||||| || ||||||| | |||| | |||| ||||||||||| ||||| Sbjct: 1613 gtttgataatgcttagcaatgctcattaaggtatccctgtggtagcaccagttctccata 1554 Query: 659 aactgagaaggtaactctacagcatccc 686 ||||| || ||||| || || ||||||| Sbjct: 1553 aactgtgacggtaattcaactgcatccc 1526
>gb|DQ226731.1| Boechera divaricarpa isolate SLW-A-H07 mRNA sequence Length = 683 Score = 87.7 bits (44), Expect = 4e-14 Identities = 106/128 (82%) Strand = Plus / Minus Query: 269 tccagaccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttg 328 ||||| ||||| ||||| || ||||| |||||||| || |||| ||||| ||||||||| Sbjct: 197 tccagtccagcgtcttcgaaagctgaaaatgcatctgcagacaaaacttctgcccacttg 138 Query: 329 taactgtagtatccagctgcatagccacctgcaaaaatgtggctgaatccacacaggaat 388 |||||||| |||||||| ||||| || ||| |||||||| ||||| | ||| |||||| Sbjct: 137 taactgtaatatccagccgcatatcccmmtgcgaaaatgtgactgaagctacagaggaat 78 Query: 389 ctgtcctc 396 || ||||| Sbjct: 77 ctatcctc 70
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttgtaactg 334 |||||||||||||| || | ||| |||||||| ||||| |||||||||||||||||| Sbjct: 5617019 ccagcatcttcaaaagcggcgaaagcatcagcactaagtacctcagcccacttgtaactg 5616960 Query: 335 tagtatccagctgcatagccacctgcaaaaatgtg 369 |||||||| || ||||| ||||||||||| ||||| Sbjct: 5616959 tagtatcccgcagcataaccacctgcaaagatgtg 5616925
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 269 tccagaccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccacttg 328 ||||| |||||||||||||| |||| ||| |||||||| ||||| || ||||||||| Sbjct: 1016549 tccagcccagcatcttcaaaagctgcgaaagcatcagcacttagtacctctgcccacttg 1016490 Query: 329 taactgtagtatccagctgcatagccacctgcaaa 363 |||||||| || ||||| ||||| ||||||||||| Sbjct: 1016489 taactgtaatagccagcagcataaccacctgcaaa 1016455
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctg 373 ||||| ||||||||||| ||||| || || || |||||||||||||||||||| |||||| Sbjct: 4324844 acttcggcccacttgtagctgtaatagccggccgcatagccacctgcaaaaatatggctg 4324903 Query: 374 aa 375 || Sbjct: 4324904 aa 4324905
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 641 tagcaccagttttccatgaactgagaaggtaactctacagcatccc 686 ||||||||||||||||| |||||||||||||| || |||||||||| Sbjct: 66243 tagcaccagttttccataaactgagaaggtaattcaacagcatccc 66198 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Minus Query: 325 cttgtaactgtagtatccagctgcatagccacct 358 |||||| || ||||||||||||||||| |||||| Sbjct: 67517 cttgtagctatagtatccagctgcatatccacct 67484
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 293 gagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatag 352 ||||| ||||| || ||||||||||| ||||||||||| |||||||| || ||||| || Sbjct: 166851 gagaacgcatcggcagacagtacttcggcccacttgtagctgtagtaaccggctgcgtaa 166910 Query: 353 ccacctgcaaaaatgtg 369 || |||||||| ||||| Sbjct: 166911 ccgcctgcaaagatgtg 166927 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 642 agcaccagttttccatgaactg 663 |||||||||||||||||||||| Sbjct: 167194 agcaccagttttccatgaactg 167215
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 311 agtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtgg 370 ||||| |||||||| |||||| |||||||||||| ||||||||||| |||||||| || Sbjct: 29892 agtacctcagcccatttgtaagagtagtatccagcagcatagccaccagcaaaaatatga 29951 Query: 371 ctgaa 375 ||||| Sbjct: 29952 ctgaa 29956
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||||||||||||||| |||||||| || || |||||||| || || || ||| Sbjct: 1387549 gacagcacttcagcccacttgtagctgtagtagcccgcggcatagccgccagcgaagatg 1387608 Query: 368 tggctgaa 375 |||||||| Sbjct: 1387609 tggctgaa 1387616
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 313 tacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggct 372 |||||| |||||||||||| |||||| || ||||||||||| ||||||||||| ||||| Sbjct: 3112655 tacttctgcccacttgtaagagtagtaacctgctgcatagccccctgcaaaaatatggct 3112596
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 293 gagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatag 352 ||||| ||||| |||| |||||| || |||||| ||| |||||||| || || ||||| Sbjct: 4077264 gagaaggcatctgctgccagtacatcggcccacaggtagctgtagtaacctgccgcataa 4077323 Query: 353 ccacctgcaaaaatgtggctgaa 375 ||||| ||||||||||||||||| Sbjct: 4077324 ccaccggcaaaaatgtggctgaa 4077346
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 325 cttgtaactgtagtatccagctgcatagccacctg 359 ||||||||||||||||||||||||||| ||||||| Sbjct: 32925 cttgtaactgtagtatccagctgcataaccacctg 32959
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 644 caccagttttccatgaactgagaaggtaactctacagcatccc 686 ||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 13919 caccagttttccatgaattgagaaggtaattcaacagcatccc 13877 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 266 ttatccagaccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccac 325 ||||||| ||| ||||||||||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 15091 ttatccaatccaacatcttcaaatgcagagaaagcatctgcagacagtacctcagcccac 15032 Query: 326 t 326 | Sbjct: 15031 t 15031
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 644 caccagttttccatgaactgagaaggtaactctacagcatccc 686 ||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 101522 caccagttttccatgaattgagaaggtaattcaacagcatccc 101480 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 266 ttatccagaccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccac 325 ||||||| ||| ||||||||||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 102694 ttatccaatccaacatcttcaaatgcagagaaagcatctgcagacagtacctcagcccac 102635 Query: 326 t 326 | Sbjct: 102634 t 102634
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctg 373 ||||| ||||||||||| |||||||| || || ||||||||||| || || ||||||||| Sbjct: 1304820 acttcggcccacttgtagctgtagtaaccggcggcatagccacccgcgaagatgtggctg 1304879 Query: 374 aa 375 || Sbjct: 1304880 aa 1304881
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctg 373 ||||| ||||| || |||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 125214 acttcggcccatttataactgtagtatcccgctgcataaccaccagcaaaaatatgtctg 125273 Query: 374 aa 375 || Sbjct: 125274 aa 125275
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctg 373 ||||| ||||| ||||||||||| ||||| |||||||| ||||| |||||||| || ||| Sbjct: 123673 acttcggcccatttgtaactgtaatatcccgctgcataaccaccagcaaaaatatgtctg 123732 Query: 374 aa 375 || Sbjct: 123733 aa 123734
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaat 366 ||||||||||| ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 731590 acttcagcccatttgtagctgtagtatccagcagcatatccgccagcaaaaat 731642
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 296 aatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagcca 355 ||||| ||||| || | |||||||||||||||||| |||||||| || |||| ||| ||| Sbjct: 5303259 aatgcgtcagcggataatacttcagcccacttgtagctgtagtaacctgctgaataacca 5303200 Query: 356 cctgcaaaaatgtggct 372 || |||| |||||||| Sbjct: 5303199 ccgccaaagatgtggct 5303183
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 299 gcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagccacct 358 ||||| || ||||| ||||||||||||||||| |||||||| || || || ||||| || Sbjct: 1710733 gcatcggccgacagcacttcagcccacttgtagctgtagtagcccgccgcgtagccgccc 1710792 Query: 359 gcaaaaatgtggctgaa 375 || || ||||||||||| Sbjct: 1710793 gcgaagatgtggctgaa 1710809
>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13 Length = 63921 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 275 ccagcatcttcaaatgctgagaatgcatcagctgacagtacttcagcccact 326 ||||| |||||||||||||| ||||||||||| |||| ||||| ||||||| Sbjct: 41743 ccagcgtcttcaaatgctgaaaatgcatcagcagacaaaacttctgcccact 41692 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 325 cttgtaactgtagtatccagctgcata 351 |||||||||||| |||||||||||||| Sbjct: 41606 cttgtaactgtaatatccagctgcata 41580
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || |||||||| || || || ||| Sbjct: 2099417 gacagcacttcggcccacttgtagctgtagtagccggccgcatagccgcccgcgaagatg 2099476 Query: 368 tggctgaa 375 |||||||| Sbjct: 2099477 tggctgaa 2099484
>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence Length = 40150 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 320 gcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtg 369 ||||||||||||||||| || || || |||||||| |||||||| ||||| Sbjct: 31434 gcccacttgtaactgtaatagcccgcagcatagccgcctgcaaagatgtg 31483
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 302 tcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgca 361 ||||| ||||| || || ||||| ||||||||||| || || |||||||||||||| | | Sbjct: 3011271 tcagccgacagcacctcggcccatttgtaactgtaataacccgctgcatagccacccgaa 3011212 Query: 362 aaaatgtggctgaa 375 ||||| || ||||| Sbjct: 3011211 aaaatatgactgaa 3011198
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 293 gagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatag 352 ||||| ||||| || ||||| ||||||||||||||||| ||||| || || ||||| || Sbjct: 47762 gagaacgcatcggcggacagcacttcagcccacttgtagctgtaataaccggctgcgtaa 47703 Query: 353 ccacctgcaaaaatgtg 369 || ||||| || ||||| Sbjct: 47702 ccgcctgcgaagatgtg 47686 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 642 agcaccagttttccatgaactg 663 |||||||||||||||||||||| Sbjct: 47419 agcaccagttttccatgaactg 47398
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 293 gagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatag 352 ||||| ||||| || ||||| ||||| ||||||||||| ||||| || || || ||||| Sbjct: 54733 gagaacgcatcggcagacagcacttcggcccacttgtagctgtaataaccggcggcataa 54674 Query: 353 ccacctgcaaaaatgtg 369 |||||||| || ||||| Sbjct: 54673 ccacctgcgaagatgtg 54657 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 642 agcaccagttttccatgaactg 663 |||||||||||||||||||||| Sbjct: 54390 agcaccagttttccatgaactg 54369
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 299 gcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagccacct 358 ||||||| ||||| ||||||||||| ||||||||||| || || || |||||||| || Sbjct: 2491683 gcatcagacgacagcacttcagcccatttgtaactgtaataacctgccgcatagccgcca 2491742 Query: 359 gcaaa 363 ||||| Sbjct: 2491743 gcaaa 2491747
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || || ||||| || || || ||| Sbjct: 2522644 gacagcacttcggcccacttgtagctgtagtagccggccgcgtagcctcccgcgaagatg 2522585 Query: 368 tggctgaa 375 |||||||| Sbjct: 2522584 tggctgaa 2522577
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || || ||||| || || || ||| Sbjct: 1806468 gacagcacttcggcccacttgtagctgtagtagccggccgcgtagccgcccgcgaagatg 1806409 Query: 368 tggctgaa 375 |||||||| Sbjct: 1806408 tggctgaa 1806401
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || || ||||| || || || ||| Sbjct: 3050496 gacagcacttcggcccacttgtagctgtagtagccggccgcgtagccgcccgcgaagatg 3050437 Query: 368 tggctgaa 375 |||||||| Sbjct: 3050436 tggctgaa 3050429
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 332 ctgtagtatccagctgcatagccacctgcaaaaatgtggctgaa 375 |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct: 3905138 ctgtagtaacctgccgcataaccaccggcaaaaatgtggctgaa 3905181
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || ||||| || || || ||||| Sbjct: 3222575 gacagcacttcggcccacttgtagctgtagtagcccgccgcataaccgcccgcgaaaata 3222516 Query: 368 tggctgaa 375 |||||||| Sbjct: 3222515 tggctgaa 3222508
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || || ||||| || || || ||| Sbjct: 2780451 gacagcacttcggcccacttgtagctgtagtagccggccgcgtagccgcccgcgaagatg 2780392 Query: 368 tggctgaa 375 |||||||| Sbjct: 2780391 tggctgaa 2780384
>gb|AE012156.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 64 of 460 of the complete genome Length = 10625 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 320 gcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctgaa 375 ||||||||||| ||||| || || || || ||||| || ||||||||||||||||| Sbjct: 3739 gcccacttgtagctgtaatacccggccgcgtagccgcccgcaaaaatgtggctgaa 3684
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 320 gcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctgaa 375 ||||||||||| ||||| || || || || ||||| || ||||||||||||||||| Sbjct: 4335121 gcccacttgtagctgtaatacccggccgcgtagccgcccgcaaaaatgtggctgaa 4335176
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagta 339 ||||| ||||| |||||||||||||||||||| Sbjct: 49308 gacagcacttcggcccacttgtaactgtagta 49277 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 642 agcaccagttttccatgaactg 663 |||||||||||||||||||||| Sbjct: 48980 agcaccagttttccatgaactg 48959
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 48.1 bits (24), Expect = 0.038 Identities = 57/68 (83%) Strand = Plus / Plus Query: 299 gcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagccacct 358 ||||| || ||||| ||||||||||| ||||| ||||| || || || ||||| ||||| Sbjct: 4899998 gcatccgccgacagcacttcagcccatttgtagctgtaataacccgcggcataaccacca 4900057 Query: 359 gcaaaaat 366 |||||||| Sbjct: 4900058 gcaaaaat 4900065
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 299 gcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagccacc 357 ||||| ||||| || || || |||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 232649 gcatctgctgatagcacctcggcccacttgtaactatagtaaccagcggcataaccacc 232591
>ref|XM_723548.1| Plasmodium yoelii yoelii str. 17XNL oligopeptidase A (PY07695) partial mRNA Length = 1383 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagcc 354 ||||| ||||| ||||||||||||||||| || || || |||||||| Sbjct: 1193 gacaggacttccgcccacttgtaactgtaatagccggccgcatagcc 1147
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 642 agcaccagttttccatgaactga 664 ||||||||||||||||||||||| Sbjct: 68952 agcaccagttttccatgaactga 68974
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagcc 354 ||||| ||||| ||||||||||||||||| || || || |||||||| Sbjct: 1336469 gacaggacttccgcccacttgtaactgtaatagccggccgcatagcc 1336423
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 293 gagaatgcatcagctgacagtacttcagcccacttgtaactgtagta 339 ||||| || ||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 103053 gagaaggcgtcagccgacagcacttcggcccacttgtagctgtagta 103007 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 642 agcaccagttttccatgaactg 663 |||||||||||||||||||||| Sbjct: 102710 agcaccagttttccatgaactg 102689
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 642 agcaccagttttccatgaactg 663 |||||||||||||||||||||| Sbjct: 96701 agcaccagttttccatgaactg 96722
>gb|AE006104.1| Pasteurella multocida subsp. multocida str. Pm70 section 71 of 204 of the complete genome Length = 10192 Score = 44.1 bits (22), Expect = 0.60 Identities = 61/74 (82%) Strand = Plus / Minus Query: 299 gcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagccacct 358 ||||||||||| || ||||| ||||| |||||||| || || || ||||| |||||| Sbjct: 6563 gcatcagctgaaagcacttctgcccataaataactgtaataacctgcggcatacccacct 6504 Query: 359 gcaaaaatgtggct 372 |||||||| ||||| Sbjct: 6503 gcaaaaatatggct 6490
>emb|AL160394.19| Human DNA sequence from clone RP11-218I21 on chromosome 13 Contains a voltage dependent anion channel protein pseudogene, complete sequence Length = 168073 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 cagtacttcagcccacttgtaa 331 |||||||||||||||||||||| Sbjct: 112181 cagtacttcagcccacttgtaa 112202
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.60 Identities = 52/62 (83%) Strand = Plus / Minus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctg 373 ||||| ||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 743356 acttcggcccatttgtagctgtaatagccggctgcgtagccgcctgcgaagatgtggctg 743297 Query: 374 aa 375 || Sbjct: 743296 aa 743295
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.60 Identities = 52/62 (83%) Strand = Plus / Minus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtggctg 373 ||||| ||||| ||||| ||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 774995 acttcggcccatttgtagctgtaatagccggctgcgtagccgcctgcgaagatgtggctg 774936 Query: 374 aa 375 || Sbjct: 774935 aa 774934
>emb|AJ937762.1| Uncultured gamma proteobacterium fosmid clone b1bcf1.1.c04 Length = 38209 Score = 44.1 bits (22), Expect = 0.60 Identities = 61/74 (82%) Strand = Plus / Plus Query: 293 gagaatgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatag 352 ||||| ||||| || |||||||| || ||||||||||| ||||| || || || || ||| Sbjct: 28578 gagaaggcatcggcggacagtacctctgcccacttgtagctgtaataccccgccgcgtag 28637 Query: 353 ccacctgcaaaaat 366 || || |||||||| Sbjct: 28638 ccgccggcaaaaat 28651
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.60 Identities = 49/58 (84%) Strand = Plus / Minus Query: 297 atgcatcagctgacagtacttcagcccacttgtaactgtagtatccagctgcatagcc 354 ||||||| || |||| ||||| ||||| ||||||||||| ||||| || |||||||| Sbjct: 2836490 atgcatccgcagacaacacttccgcccatttgtaactgtaatatccggcggcatagcc 2836433
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 cacaggaatctgtcctctggc 400 ||||||||||||||||||||| Sbjct: 16004 cacaggaatctgtcctctggc 16024
>gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's Hospital Oakland Research Institute) complete sequence Length = 178272 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 cacaggaatctgtcctctggc 400 ||||||||||||||||||||| Sbjct: 132876 cacaggaatctgtcctctggc 132896
>gb|AC092966.6| Homo sapiens 3 BAC RP11-143P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138589 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 408 caagaacctgggttttttctgcaac 432 |||||||||||||||||||| |||| Sbjct: 116089 caagaacctgggttttttctacaac 116113
>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185918 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gtgcctaagcagtggctctgg 153 ||||||||||||||||||||| Sbjct: 113354 gtgcctaagcagtggctctgg 113374
>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence Length = 185684 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 606 aatgctttgctatgctcaaaa 626 ||||||||||||||||||||| Sbjct: 107902 aatgctttgctatgctcaaaa 107882
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete sequence Length = 299903 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gtgcctaagcagtggctctgg 153 ||||||||||||||||||||| Sbjct: 295508 gtgcctaagcagtggctctgg 295528
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagcc 354 ||||| ||||| ||||||| |||||||| ||||||||||| Sbjct: 1877691 acttccgcccatttgtaaccatagtatccggctgcatagcc 1877731
>gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosome 6, complete sequence Length = 223116 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tgtgcctaagcagtggctct 151 |||||||||||||||||||| Sbjct: 27644 tgtgcctaagcagtggctct 27625
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gctgcatagccacctgcaaa 363 |||||||||||||||||||| Sbjct: 4102 gctgcatagccacctgcaaa 4083
>gb|AC117693.9| Mus musculus chromosome 1, clone RP23-448D22, complete sequence Length = 193386 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agttttatttattacaacag 20 |||||||||||||||||||| Sbjct: 31206 agttttatttattacaacag 31187
>gb|AC117627.16| Mus musculus chromosome 1, clone RP23-116N6, complete sequence Length = 201995 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agttttatttattacaacag 20 |||||||||||||||||||| Sbjct: 150247 agttttatttattacaacag 150228
>gb|AC153608.10| Mus musculus 6 BAC RP23-79A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188294 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gctgcatagccacctgcaaa 363 |||||||||||||||||||| Sbjct: 33128 gctgcatagccacctgcaaa 33147
>gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 Score = 40.1 bits (20), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 82 gcaaatgaaaaagnaaaaagaac 104 ||||||||||||| ||||||||| Sbjct: 138951 gcaaatgaaaaagaaaaaagaac 138929
>ref|XM_569107.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01010) partial mRNA Length = 1329 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 tagcatagatttcctctgga 586 |||||||||||||||||||| Sbjct: 1137 tagcatagatttcctctgga 1118
>gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosome 6, complete sequence Length = 152532 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tgtgcctaagcagtggctct 151 |||||||||||||||||||| Sbjct: 47688 tgtgcctaagcagtggctct 47707
>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence Length = 253910 Score = 40.1 bits (20), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 caaatgaaaaagnaaaaagaacc 105 |||||||||||| |||||||||| Sbjct: 199619 caaatgaaaaagcaaaaagaacc 199597
>ref|XM_661294.1| Cryptosporidium hominis TU502 CG12099-PB (Chro.20190) partial mRNA Length = 1446 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 atcttcaaatgctgagaatg 299 |||||||||||||||||||| Sbjct: 584 atcttcaaatgctgagaatg 603
>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland Research Institute) complete sequence Length = 212829 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cagaggagcaagaacctggg 419 |||||||||||||||||||| Sbjct: 192367 cagaggagcaagaacctggg 192348
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 9.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 314 acttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatgtg 369 ||||| ||||| ||||||||||| || || || ||||| |||||||| || ||||| Sbjct: 160469 acttccgcccatttgtaactgtaatagccggccgcataaccacctgcgaagatgtg 160414
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 tagcatagatttcctctgga 586 |||||||||||||||||||| Sbjct: 306881 tagcatagatttcctctgga 306862
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagta 339 ||||| ||||| ||||||||||| |||||||| Sbjct: 49019 gacagcacttccgcccacttgtagctgtagta 48988
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 gtcctctggcagaggagcaagaac 414 ||||||||| |||||||||||||| Sbjct: 46473 gtcctctggaagaggagcaagaac 46450
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagta 339 ||||| ||||| ||||||||||| |||||||| Sbjct: 2504898 gacaggacttcggcccacttgtagctgtagta 2504867
>gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone BACR07M13, complete sequence Length = 172529 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acatcgaaataaaaaatcct 69 |||||||||||||||||||| Sbjct: 170611 acatcgaaataaaaaatcct 170630
>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone BACR48K02, complete sequence Length = 178530 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acatcgaaataaaaaatcct 69 |||||||||||||||||||| Sbjct: 47163 acatcgaaataaaaaatcct 47182
>gb|AC090946.2| Homo sapiens chromosome 3 clone RP11-2B2 map 3p, complete sequence Length = 171206 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tgcaaaaatgtggctgaatc 377 |||||||||||||||||||| Sbjct: 57187 tgcaaaaatgtggctgaatc 57168
>gb|AC087858.2| Homo sapiens chromosome 3 clone RP11-207E20 map 3p, complete sequence Length = 179723 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tgcaaaaatgtggctgaatc 377 |||||||||||||||||||| Sbjct: 7657 tgcaaaaatgtggctgaatc 7676
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 aaaatgtggctgaatccaca 381 |||||||||||||||||||| Sbjct: 50775 aaaatgtggctgaatccaca 50794
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1399_H05 Length = 147670 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 aaaatgtggctgaatccaca 381 |||||||||||||||||||| Sbjct: 129539 aaaatgtggctgaatccaca 129558
>gb|AC154856.2| Mus musculus BAC clone RP23-20C2 from 13, complete sequence Length = 248953 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aataaaaaatcctaaagttg 76 |||||||||||||||||||| Sbjct: 66387 aataaaaaatcctaaagttg 66406
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete sequence Length = 253771 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acatcgaaataaaaaatcct 69 |||||||||||||||||||| Sbjct: 174788 acatcgaaataaaaaatcct 174807
>gb|AC115894.6| Mus musculus chromosome 18, clone RP24-443A14, complete sequence Length = 185242 Score = 40.1 bits (20), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 caaatgaaaaagnaaaaagaacc 105 |||||||||||| |||||||||| Sbjct: 61735 caaatgaaaaagcaaaaagaacc 61713
>dbj|D10985.1|RICCBP3 Oryza sativa (japonica cultivar-group) cbp3 gene for serine carboxypeptidase III, complete cds Length = 7945 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aaaatgtggctgaatccaca 381 |||||||||||||||||||| Sbjct: 1506 aaaatgtggctgaatccaca 1487
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 9.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 308 gacagtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaatg 367 ||||| ||||| ||||||||||| |||||||| || || || ||||| || | || ||| Sbjct: 905233 gacagcacttccgcccacttgtagctgtagtagccggccgcgtagccgccgccgaagatg 905174 Query: 368 tggctgaa 375 |||||||| Sbjct: 905173 tggctgaa 905166
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 9.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 311 agtacttcagcccacttgtaactgtagtatccagctgcatagccacctgcaaaaat 366 ||||||||||||||||| ||| ||| || || |||| ||| ||||| |||||||| Sbjct: 989005 agtacttcagcccacttataagagtaataacctgctgaatatccaccagcaaaaat 988950
>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete sequence Length = 182503 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 gtcctctggcagaggagcaagaac 414 ||||||||| |||||||||||||| Sbjct: 65992 gtcctctggaagaggagcaagaac 66015 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,717,413 Number of Sequences: 3902068 Number of extensions: 6717413 Number of successful extensions: 108071 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107242 Number of HSP's gapped (non-prelim): 826 length of query: 686 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 663 effective length of database: 17,143,297,704 effective search space: 11366006377752 effective search space used: 11366006377752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
