| Clone Name | rbaal6g24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TRPV1_RABIT (Q6RX08) Transient receptor potential cation channel... | 28 | 7.0 |
|---|
>TRPV1_RABIT (Q6RX08) Transient receptor potential cation channel subfamily V| member 1 (TrpV1) (osm-9-like TRP channel 1) (OTRPC1) (Vanilloid receptor 1) Length = 842 Score = 28.1 bits (61), Expect = 7.0 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = -3 Query: 122 IFHFIFAIYLLFLV*VSINSYFVPVNIAPVDTLXQIP 12 IF+F F +Y L+++ + +Y+ PV+ P L +P Sbjct: 436 IFYFNFFVYCLYMIIFTTAAYYRPVDGLPPYKLRNLP 472 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,549,664 Number of Sequences: 219361 Number of extensions: 161464 Number of successful extensions: 259 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 259 length of database: 80,573,946 effective HSP length: 21 effective length of database: 75,967,365 effective search space used: 1823216760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)