ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10j03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 313 4e-82
2dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 313 4e-82
3ref|NM_188678.1| Oryza sativa (japonica cultivar-group), Ozsa828... 307 2e-80
4gb|DQ011286.1| Zea mays Mu killer (Muk) insertion site, genomic ... 131 3e-27
5ref|NM_113297.2| Arabidopsis thaliana beta-amylase AT3G23920 mRN... 54 6e-04
6gb|AY096517.1| Arabidopsis thaliana putative beta-amylase (At3g2... 54 6e-04
7gb|AY074393.1| Arabidopsis thaliana putative beta-amylase (At3g2... 54 6e-04
8gb|AY078046.1| Arabidopsis thaliana AT3g23920/F14O13_11 mRNA, co... 54 6e-04
9gb|AF367293.1|AF367293 Arabidopsis thaliana AT3g23920/F14O13_11 ... 54 6e-04
10emb|BX823311.1|CNS0A4RM Arabidopsis thaliana Full-length cDNA Co... 54 6e-04
11dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 54 6e-04
12emb|BX825381.1|CNS0A50Q Arabidopsis thaliana Full-length cDNA Co... 48 0.035
13gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosom... 42 2.2
14ref|XM_645347.1| Entamoeba histolytica HM-1:IMSS zinc finger pro... 42 2.2
15emb|AJ971701.1| Malvastrum yellow vein virus-associated DNA beta... 42 2.2
16emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 42 2.2
17gb|AC015883.6| Homo sapiens chromosome 17, clone RP11-226M10, co... 42 2.2
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
19gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, comple... 42 2.2
20gb|AC018833.3|AC018833 Homo sapiens chromosome 3 clone RP11-497I... 42 2.2
21emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chr... 42 2.2
22gb|AC026214.4| Homo sapiens chromosome 3 clone RP11-717M12 map 3... 42 2.2
23ref|NM_117813.2| Arabidopsis thaliana CT-BMY; beta-amylase AT4G1... 40 8.5
24gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome... 40 8.5
25gb|AY692660.1| Saccharomyces cerevisiae clone FLH113184.01X YNL2... 40 8.5
26gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosom... 40 8.5
27gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, comp... 40 8.5
28gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete s... 40 8.5
29gb|AC124542.4| Mus musculus BAC clone RP23-259B10 from 12, compl... 40 8.5
30emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chr... 40 8.5
31gb|AC128660.31| Medicago truncatula clone mth2-14p23, complete s... 40 8.5
32gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete s... 40 8.5
33emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chr... 40 8.5
34emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chro... 40 8.5
35emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chr... 40 8.5
36emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chro... 40 8.5
37emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on ch... 40 8.5
38emb|AL354654.15| Human DNA sequence from clone RP11-170N11 on ch... 40 8.5
39emb|BX936319.2| Human DNA sequence from clone XX-C007400748 on c... 40 8.5
40emb|CR456636.2| Human DNA sequence from clone XX-F96F65 on chrom... 40 8.5
41emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 8.5
42emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, ... 40 8.5
43emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chro... 40 8.5
44emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chr... 40 8.5
45gb|AC113349.2| Homo sapiens chromosome 5 clone CTD-2544H17, comp... 40 8.5
46dbj|AK035467.1| Mus musculus adult male urinary bladder cDNA, RI... 40 8.5
47gb|AC010255.9|AC010255 Homo sapiens chromosome 5 clone CTC-441N1... 40 8.5
48emb|BX827256.1|CNS0A4MP Arabidopsis thaliana Full-length cDNA Co... 40 8.5
49gb|AY087592.1| Arabidopsis thaliana clone 36882 mRNA, complete s... 40 8.5
50gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D... 40 8.5
51gb|AC067969.1| Homo sapiens chromosome 19 cosmid R26839 (LLNL-R_... 40 8.5
52emb|Z71550.1|SCYNL274C S.cerevisiae chromosome XIV reading frame... 40 8.5
53gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 8.5
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.5
55gb|U48485.1|HUMRYR37 Human skeletal muscle ryanodine receptor ge... 40 8.5
56emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17,... 40 8.5
57emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on ch... 40 8.5
58gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complet... 40 8.5
59gb|AC154229.1| Mus musculus BAC clone RP24-155I8 from 17, comple... 40 8.5
60emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in... 40 8.5
61emb|AL772390.8| Mouse DNA sequence from clone RP23-446N8 on chro... 40 8.5
62emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chro... 40 8.5
63emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on ch... 40 8.5 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  313 bits (158), Expect = 4e-82
 Identities = 431/522 (82%)
 Strand = Plus / Plus

                                                                           
Query: 98      tcatgtgtatgcgcaggcccggctagcgacccaaacaactgacattgaaggcaggcattg 157
               |||||| ||||| |||||||||||  ||||||| ||||| ||||| || |  ||| | ||
Sbjct: 7577201 tcatgtctatgcacaggcccggctgacgacccagacaaccgacatcgaggagaggtaatg 7577260

                                                                           
Query: 158     ctgtccgctcctgaagttcagcctagccagaaaggttctggcatccgacatcttcctgac 217
               ||| || |||||||| |  ||||| || ||||| || |||||||||||||||| ||||||
Sbjct: 7577261 ctgccctctcctgaactcgagcctggctagaaatgtcctggcatccgacatctgcctgac 7577320

                                                                           
Query: 218     gaacttcgtaaaccggttccagttgtgcgactcaaacaggctcttgttcatcctgacata 277
               |||||| || |||| ||||||||||||  |||||||||||||||||||||| ||||||||
Sbjct: 7577321 gaacttggtgaacctgttccagttgtgaaactcaaacaggctcttgttcattctgacata 7577380

                                                                           
Query: 278     gttgaaggagaaagacgcgcccgaggtgccgcccgagtagagcctcgagcttctgacgac 337
               ||||||||||||||| |  || |||||||| || ||||||||||| |||||||||| |||
Sbjct: 7577381 gttgaaggagaaagatgtccctgaggtgccacctgagtagagccttgagcttctgatgac 7577440

                                                                           
Query: 338     ctggctcagcgacgcgtcgtccagcctcggcaccgagttctcgccgttgagagggagatt 397
                ||  |||||||||  ||||| ||||| | ||| ||||| |||||||| ||||| |||||
Sbjct: 7577441 ttgattcagcgacgtatcgtcgagccttgtcacggagttttcgccgttcagaggtagatt 7577500

                                                                           
Query: 398     gcataccttagcggcggccatgagttgccggagagtgccctcggggctgctctgaggact 457
               ||| | ||| |||||| |||| |||||||||||||| || || ||||||||||  |   |
Sbjct: 7577501 gcacatcttggcggcgaccataagttgccggagagtaccttctgggctgctcttggagtt 7577560

                                                                           
Query: 458     gcttctctccgcatccctcaggtcaaaacagccgcagcacagggcggctctgtgtcgaga 517
                 |||||||| |||||||||||||||| || | |||||||| ||| ||  ||| || || 
Sbjct: 7577561 atttctctcctcatccctcaggtcaaagcaactgcagcacaaggcagccttgtatctagc 7577620

                                                                           
Query: 518     gaacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgt 577
                |||||||||| ||| || ||||| ||||  || | ||||||||||||||| || || ||
Sbjct: 7577621 aaacatttgggtgataggaagataaccgttcctcaacaatgtgttgtagtaaccagcagt 7577680

                                                         
Query: 578     cagctcagatgggtgtgaacatgtgtagtagtgccagtgtat 619
               ||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 7577681 cagttccgatgggtgcgaacatgtatagtagtgccaatgtat 7577722
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0708G02
          Length = 168976

 Score =  313 bits (158), Expect = 4e-82
 Identities = 431/522 (82%)
 Strand = Plus / Plus

                                                                          
Query: 98     tcatgtgtatgcgcaggcccggctagcgacccaaacaactgacattgaaggcaggcattg 157
              |||||| ||||| |||||||||||  ||||||| ||||| ||||| || |  ||| | ||
Sbjct: 125993 tcatgtctatgcacaggcccggctgacgacccagacaaccgacatcgaggagaggtaatg 126052

                                                                          
Query: 158    ctgtccgctcctgaagttcagcctagccagaaaggttctggcatccgacatcttcctgac 217
              ||| || |||||||| |  ||||| || ||||| || |||||||||||||||| ||||||
Sbjct: 126053 ctgccctctcctgaactcgagcctggctagaaatgtcctggcatccgacatctgcctgac 126112

                                                                          
Query: 218    gaacttcgtaaaccggttccagttgtgcgactcaaacaggctcttgttcatcctgacata 277
              |||||| || |||| ||||||||||||  |||||||||||||||||||||| ||||||||
Sbjct: 126113 gaacttggtgaacctgttccagttgtgaaactcaaacaggctcttgttcattctgacata 126172

                                                                          
Query: 278    gttgaaggagaaagacgcgcccgaggtgccgcccgagtagagcctcgagcttctgacgac 337
              ||||||||||||||| |  || |||||||| || ||||||||||| |||||||||| |||
Sbjct: 126173 gttgaaggagaaagatgtccctgaggtgccacctgagtagagccttgagcttctgatgac 126232

                                                                          
Query: 338    ctggctcagcgacgcgtcgtccagcctcggcaccgagttctcgccgttgagagggagatt 397
               ||  |||||||||  ||||| ||||| | ||| ||||| |||||||| ||||| |||||
Sbjct: 126233 ttgattcagcgacgtatcgtcgagccttgtcacggagttttcgccgttcagaggtagatt 126292

                                                                          
Query: 398    gcataccttagcggcggccatgagttgccggagagtgccctcggggctgctctgaggact 457
              ||| | ||| |||||| |||| |||||||||||||| || || ||||||||||  |   |
Sbjct: 126293 gcacatcttggcggcgaccataagttgccggagagtaccttctgggctgctcttggagtt 126352

                                                                          
Query: 458    gcttctctccgcatccctcaggtcaaaacagccgcagcacagggcggctctgtgtcgaga 517
                |||||||| |||||||||||||||| || | |||||||| ||| ||  ||| || || 
Sbjct: 126353 atttctctcctcatccctcaggtcaaagcaactgcagcacaaggcagccttgtatctagc 126412

                                                                          
Query: 518    gaacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgt 577
               |||||||||| ||| || ||||| ||||  || | ||||||||||||||| || || ||
Sbjct: 126413 aaacatttgggtgataggaagataaccgttcctcaacaatgtgttgtagtaaccagcagt 126472

                                                        
Query: 578    cagctcagatgggtgtgaacatgtgtagtagtgccagtgtat 619
              ||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 126473 cagttccgatgggtgcgaacatgtatagtagtgccaatgtat 126514
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>ref|NM_188678.1| Oryza sativa (japonica cultivar-group), Ozsa8281 predicted mRNA
          Length = 1323

 Score =  307 bits (155), Expect = 2e-80
 Identities = 425/515 (82%)
 Strand = Plus / Minus

                                                                        
Query: 105  tatgcgcaggcccggctagcgacccaaacaactgacattgaaggcaggcattgctgtccg 164
            ||||| |||||||||||  ||||||| ||||| ||||| || |  ||| | ||||| || 
Sbjct: 1322 tatgcacaggcccggctgacgacccagacaaccgacatcgaggagaggtaatgctgccct 1263

                                                                        
Query: 165  ctcctgaagttcagcctagccagaaaggttctggcatccgacatcttcctgacgaacttc 224
            |||||||| |  ||||| || ||||| || |||||||||||||||| |||||||||||| 
Sbjct: 1262 ctcctgaactcgagcctggctagaaatgtcctggcatccgacatctgcctgacgaacttg 1203

                                                                        
Query: 225  gtaaaccggttccagttgtgcgactcaaacaggctcttgttcatcctgacatagttgaag 284
            || |||| ||||||||||||  |||||||||||||||||||||| |||||||||||||||
Sbjct: 1202 gtgaacctgttccagttgtgaaactcaaacaggctcttgttcattctgacatagttgaag 1143

                                                                        
Query: 285  gagaaagacgcgcccgaggtgccgcccgagtagagcctcgagcttctgacgacctggctc 344
            |||||||| |  || |||||||| || ||||||||||| |||||||||| ||| ||  ||
Sbjct: 1142 gagaaagatgtccctgaggtgccacctgagtagagccttgagcttctgatgacttgattc 1083

                                                                        
Query: 345  agcgacgcgtcgtccagcctcggcaccgagttctcgccgttgagagggagattgcatacc 404
            |||||||  ||||| ||||| | ||| ||||| |||||||| ||||| |||||||| | |
Sbjct: 1082 agcgacgtatcgtcgagccttgtcacggagttttcgccgttcagaggtagattgcacatc 1023

                                                                        
Query: 405  ttagcggcggccatgagttgccggagagtgccctcggggctgctctgaggactgcttctc 464
            || |||||| |||| |||||||||||||| || || ||||||||||  |   |  |||||
Sbjct: 1022 ttggcggcgaccataagttgccggagagtaccttctgggctgctcttggagttatttctc 963

                                                                        
Query: 465  tccgcatccctcaggtcaaaacagccgcagcacagggcggctctgtgtcgagagaacatt 524
            ||| |||||||||||||||| || | |||||||| ||| ||  ||| || ||  ||||||
Sbjct: 962  tcctcatccctcaggtcaaagcaactgcagcacaaggcagccttgtatctagcaaacatt 903

                                                                        
Query: 525  tgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtcagctca 584
            |||| ||| || ||||| ||||  || | ||||||||||||||| || || ||||| || 
Sbjct: 902  tgggtgataggaagataaccgttcctcaacaatgtgttgtagtaaccagcagtcagttcc 843

                                               
Query: 585  gatgggtgtgaacatgtgtagtagtgccagtgtat 619
            |||||||| |||||||| ||||||||||| |||||
Sbjct: 842  gatgggtgcgaacatgtatagtagtgccaatgtat 808
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>gb|DQ011286.1| Zea mays Mu killer (Muk) insertion site, genomic sequence
          Length = 13941

 Score =  131 bits (66), Expect = 3e-27
 Identities = 192/234 (82%)
 Strand = Plus / Minus

                                                                        
Query: 98   tcatgtgtatgcgcaggcccggctagcgacccaaacaactgacattgaaggcaggcattg 157
            |||||| ||||| || ||||| ||| | |||||||||||||||||||||| || | ||||
Sbjct: 4334 tcatgtatatgcacaagcccgactaaccacccaaacaactgacattgaagacaagtattg 4275

                                                                        
Query: 158  ctgtccgctcctgaagttcagcctagccagaaaggttctggcatccgacatcttcctgac 217
            ||| || |||||||  | ||| || || |||||||| |||||||| ||||||| ||| ||
Sbjct: 4274 ctgccctctcctgacatacagtcttgctagaaaggtcctggcatctgacatctgcctaac 4215

                                                                        
Query: 218  gaacttcgtaaaccggttccagttgtgcgactcaaacaggctcttgttcatcctgacata 277
             ||||| ||||| || ||||| |||||  ||||||||| ||| ||||||||||| |||||
Sbjct: 4214 aaactttgtaaatcgattccaattgtgaaactcaaacaagcttttgttcatcctaacata 4155

                                                                  
Query: 278  gttgaaggagaaagacgcgcccgaggtgccgcccgagtagagcctcgagcttct 331
            ||| ||||| ||||| |  || || || | ||| ||||||||||| ||||||||
Sbjct: 4154 gttaaaggaaaaagatgttcctgaagtacggcctgagtagagccttgagcttct 4101



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||| || || || |||||||| |||||||  |  || ||||||||||| | ||||
Sbjct: 3913 aacatttgagctataggaagatagccatctcttaatagagtattgtagtagccagatgtc 3854

                                                     
Query: 579  agctcagatgggtgtgaacatgtgtagtagtgccagtgtat 619
            || |||||||| |||||||| || || |||||||| |||||
Sbjct: 3853 agttcagatggatgtgaacaagtataatagtgccaatgtat 3813
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>ref|NM_113297.2| Arabidopsis thaliana beta-amylase AT3G23920 mRNA, complete cds
          Length = 2131

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 1439 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 1380

                   
Query: 579  agctcag 585
            |||||||
Sbjct: 1379 agctcag 1373
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>gb|AY096517.1| Arabidopsis thaliana putative beta-amylase (At3g23920) mRNA, complete
            cds
          Length = 1759

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 1286 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 1227

                   
Query: 579  agctcag 585
            |||||||
Sbjct: 1226 agctcag 1220
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>gb|AY074393.1| Arabidopsis thaliana putative beta-amylase (At3g23920) mRNA, complete
            cds
          Length = 2081

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 1386 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 1327

                   
Query: 579  agctcag 585
            |||||||
Sbjct: 1326 agctcag 1320
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>gb|AY078046.1| Arabidopsis thaliana AT3g23920/F14O13_11 mRNA, complete cds
          Length = 1728

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 1286 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 1227

                   
Query: 579  agctcag 585
            |||||||
Sbjct: 1226 agctcag 1220
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>gb|AF367293.1|AF367293 Arabidopsis thaliana AT3g23920/F14O13_11 mRNA, complete cds
          Length = 1902

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 1386 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 1327

                   
Query: 579  agctcag 585
            |||||||
Sbjct: 1326 agctcag 1320
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>emb|BX823311.1|CNS0A4RM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS21ZG02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1875

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 519  aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
            |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 1386 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 1327

                   
Query: 579  agctcag 585
            |||||||
Sbjct: 1326 agctcag 1320
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>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13
          Length = 106203

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 519   aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
             |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 46601 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 46542

                    
Query: 579   agctcag 585
             |||||||
Sbjct: 46541 agctcag 46535
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>emb|BX825381.1|CNS0A50Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL33ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1176

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 519 aacatttgggcgatggggagatagccgtctcttagcaatgtgttgtagtagccggctgtc 578
           |||||||||||||| ||||| || |||||||| | |  |||||||||||| || ||||| 
Sbjct: 559 aacatttgggcgatcgggaggtacccgtctctgaaccttgtgttgtagtaccctgctgtg 500

               
Query: 579 agct 582
           ||||
Sbjct: 499 agct 496
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>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence
          Length = 199464

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    taagattacaggtacatgctt 81
             |||||||||||||||||||||
Sbjct: 54983 taagattacaggtacatgctt 55003
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>ref|XM_645347.1| Entamoeba histolytica HM-1:IMSS zinc finger protein (219.t00006)
           partial mRNA
          Length = 1119

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  attttctttcttgaatcatct 55
           |||||||||||||||||||||
Sbjct: 409 attttctttcttgaatcatct 389
to top
>emb|AJ971701.1| Malvastrum yellow vein virus-associated DNA beta complete genome,
           isolate Y278
          Length = 1350

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 30  cttccattttctttcttgaat 50
           |||||||||||||||||||||
Sbjct: 851 cttccattttctttcttgaat 831
to top
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
             complete sequence
          Length = 145739

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 25    gttttcttccattttctttcttgaa 49
             |||||||||| ||||||||||||||
Sbjct: 83710 gttttcttcctttttctttcttgaa 83734
to top
>gb|AC015883.6| Homo sapiens chromosome 17, clone RP11-226M10, complete sequence
          Length = 159777

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    ttttcttccattttctttctt 46
             |||||||||||||||||||||
Sbjct: 80562 ttttcttccattttctttctt 80542
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 25       gttttcttccattttctttcttgaa 49
                |||||||||| ||||||||||||||
Sbjct: 29581021 gttttcttcctttttctttcttgaa 29581045
to top
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence
          Length = 214838

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 27   tttcttccattttctttcttg 47
            |||||||||||||||||||||
Sbjct: 6687 tttcttccattttctttcttg 6667
to top
>gb|AC018833.3|AC018833 Homo sapiens chromosome 3 clone RP11-497I24, complete sequence
          Length = 145976

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 25    gttttcttccattttctttcttgaa 49
             |||||||||||||||||| ||||||
Sbjct: 76640 gttttcttccattttcttccttgaa 76616
to top
>emb|AL954713.11| Mouse DNA sequence from clone RP23-463K8 on chromosome 2, complete
              sequence
          Length = 171734

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     ttttcttccattttctttctt 46
              |||||||||||||||||||||
Sbjct: 159274 ttttcttccattttctttctt 159254
to top
>gb|AC026214.4| Homo sapiens chromosome 3 clone RP11-717M12 map 3p, complete sequence
          Length = 174645

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 25    gttttcttccattttctttcttgaa 49
             |||||||||||||||||| ||||||
Sbjct: 75545 gttttcttccattttcttccttgaa 75569
to top
>ref|NM_117813.2| Arabidopsis thaliana CT-BMY; beta-amylase AT4G17090 (CT-BMY) mRNA,
            complete cds
          Length = 2035

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 557  tgtgttgtagtagccggctgtcagctcagatgggtgtgaacatgtgtagtagtgccagtg 616
            |||||||||||| || || || ||||||| || |||||| |  |||| ||||||||||||
Sbjct: 1269 tgtgttgtagtatccagcggttagctcagctgcgtgtgacctggtgttgtagtgccagtg 1210
to top
>gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome 3, complete sequence
          Length = 204419

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     tgcttgacacacagcaaaaaatca 100
              |||||||||||||||| |||||||
Sbjct: 199300 tgcttgacacacagcagaaaatca 199323
to top
>gb|AY692660.1| Saccharomyces cerevisiae clone FLH113184.01X YNL274C gene, complete
           cds
          Length = 1053

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  ttcttccattttctttcttg 47
           ||||||||||||||||||||
Sbjct: 945 ttcttccattttctttcttg 926
to top
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence
          Length = 236084

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    tgacatagttgaaggagaaa 290
              ||||||||||||||||||||
Sbjct: 235557 tgacatagttgaaggagaaa 235538
to top
>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence
          Length = 177788

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    taagattacaggtacatgct 80
             ||||||||||||||||||||
Sbjct: 58620 taagattacaggtacatgct 58639
to top
>gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete sequence
          Length = 121741

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ttttcttccattttctttct 45
             ||||||||||||||||||||
Sbjct: 45704 ttttcttccattttctttct 45723
to top
>gb|AC124542.4| Mus musculus BAC clone RP23-259B10 from 12, complete sequence
          Length = 179046

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aagttttcttccattttctt 42
              ||||||||||||||||||||
Sbjct: 138370 aagttttcttccattttctt 138351
to top
>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete
             sequence
          Length = 166687

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gttttcttccattttctttc 44
             ||||||||||||||||||||
Sbjct: 80850 gttttcttccattttctttc 80831
to top
>gb|AC128660.31| Medicago truncatula clone mth2-14p23, complete sequence
          Length = 99170

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tttcttccattttctttctt 46
             ||||||||||||||||||||
Sbjct: 12060 tttcttccattttctttctt 12079
to top
>gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete sequence
          Length = 114611

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    ttttcttccattttctttct 45
             ||||||||||||||||||||
Sbjct: 63502 ttttcttccattttctttct 63483
to top
>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a
             RAB28, member RAS oncogene family pseudogene (RAB28), a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH), two novel
             pseudogenes, a pseudogene similar to part of fibroblast
             growth factor 7 (keratinocyte growth factor) (FGF7), the
             3' end of a novel gene and two CpG islands, complete
             sequence
          Length = 163837

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gttttcttccattttctttc 44
             ||||||||||||||||||||
Sbjct: 91779 gttttcttccattttctttc 91760
to top
>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), two novel
             pseudogenes, a pseudogene similar to part of G
             protein-coupled receptor 116 (GPR116), a novel gene and a
             pseudogene similar to part of meprin A, alpha (PABA
             peptide hydrolase) (MEP1A), complete sequence
          Length = 167646

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    gttttcttccattttctttc 44
             ||||||||||||||||||||
Sbjct: 89300 gttttcttccattttctttc 89319
to top
>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7), three novel
              pseudogenes, two novel genes, a recombining binding protein
              suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a
              RAB28, member RAS oncogene family (RAB28) pseudogene and
              two CpG islands, complete sequence
          Length = 202891

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     gttttcttccattttctttc 44
              ||||||||||||||||||||
Sbjct: 122507 gttttcttccattttctttc 122526
to top
>emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chromosome 9 Contains two
             novel pseudogenes, two novel genes, a recombining binding
             protein suppressor of hairless (Drosophila) (RBPSUH)
             pseudogene, a RAB28, member RAS oncogene family (RAB28)
             pseudogene and a G protein-coupled receptor, family C,
             group 5,member B (GPRC5B) pseudogene, complete sequence
          Length = 157298

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    gttttcttccattttctttc 44
             ||||||||||||||||||||
Sbjct: 79744 gttttcttccattttctttc 79763
to top
>emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on chromosome 9 Contains three
              novel genes, a novel pseudogene, two novel pseudogenes
              (LOC339742), a tumor suppressor deleted in oral
              cancer-related 1 (DOC-1R) pseudogene, a pseudogene similar
              to part of prostaglandin E receptor 4 (subtype EP4)
              (PTGER4), a pseudogene similar to part of myosin VA (heavy
              polypeptide 12, myoxin) (MYO5A), a pseudogene similar to
              part of G protein-coupled receptor 116 (GPR116), a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7) and five CpG islands,
              complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     gttttcttccattttctttc 44
              ||||||||||||||||||||
Sbjct: 124995 gttttcttccattttctttc 125014
to top
>emb|AL354654.15| Human DNA sequence from clone RP11-170N11 on chromosome 1 Contains part
              of a novel gene and a novel gene, complete sequence
          Length = 136856

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ttttcttccattttctttct 45
              ||||||||||||||||||||
Sbjct: 120902 ttttcttccattttctttct 120921
to top
>emb|BX936319.2| Human DNA sequence from clone XX-C007400748 on chromosome 22,
            complete sequence
          Length = 7038

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  cggggctgctctgaggactg 458
            ||||||||||||||||||||
Sbjct: 1393 cggggctgctctgaggactg 1374
to top
>emb|CR456636.2| Human DNA sequence from clone XX-F96F65 on chromosome 22, complete
            sequence
          Length = 8512

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  cggggctgctctgaggactg 458
            ||||||||||||||||||||
Sbjct: 2621 cggggctgctctgaggactg 2602
to top
>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7
          Length = 201471

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 557    tgtgttgtagtagccggctgtcagctcagatgggtgtgaacatgtgtagtagtgccagtg 616
              |||||||||||| || || || ||||||| || |||||| |  |||| ||||||||||||
Sbjct: 168587 tgtgttgtagtatccagcggttagctcagctgcgtgtgacctggtgttgtagtgccagtg 168646
to top
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45
          Length = 199548

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 557    tgtgttgtagtagccggctgtcagctcagatgggtgtgaacatgtgtagtagtgccagtg 616
              |||||||||||| || || || ||||||| || |||||| |  |||| ||||||||||||
Sbjct: 154416 tgtgttgtagtatccagcggttagctcagctgcgtgtgacctggtgttgtagtgccagtg 154475
to top
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
              pseudogene similar to part of a novel protein
              (DKFZp434A171), a pseudogene similar to part of meprin A,
              alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of a novel transmembrane receptor protein
              and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     gttttcttccattttctttc 44
              ||||||||||||||||||||
Sbjct: 106860 gttttcttccattttctttc 106841
to top
>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete
              sequence
          Length = 166827

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     gttttcttccattttctttc 44
              ||||||||||||||||||||
Sbjct: 123740 gttttcttccattttctttc 123759
to top
>gb|AC113349.2| Homo sapiens chromosome 5 clone CTD-2544H17, complete sequence
          Length = 163806

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     ttttcttccattttctttcttgaa 49
              ||||||||||||||||||| ||||
Sbjct: 145658 ttttcttccattttctttcctgaa 145635
to top
>dbj|AK035467.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530052G04
            product:unclassifiable, full insert sequence
          Length = 3025

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   ttttcttccattttctttct 45
            ||||||||||||||||||||
Sbjct: 2916 ttttcttccattttctttct 2935
to top
>gb|AC010255.9|AC010255 Homo sapiens chromosome 5 clone CTC-441N14, complete sequence
          Length = 215111

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    ttttcttccattttctttcttgaa 49
             ||||||||||||||||||| ||||
Sbjct: 13169 ttttcttccattttctttcctgaa 13146
to top
>emb|BX827256.1|CNS0A4MP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS29ZC10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1784

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 557  tgtgttgtagtagccggctgtcagctcagatgggtgtgaacatgtgtagtagtgccagtg 616
            |||||||||||| || || || ||||||| || |||||| |  |||| ||||||||||||
Sbjct: 1258 tgtgttgtagtatccagcggttagctcagctgcgtgtgacctggtgttgtagtgccagtg 1199
to top
>gb|AY087592.1| Arabidopsis thaliana clone 36882 mRNA, complete sequence
          Length = 1963

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 557  tgtgttgtagtagccggctgtcagctcagatgggtgtgaacatgtgtagtagtgccagtg 616
            |||||||||||| || || || ||||||| || |||||| |  |||| ||||||||||||
Sbjct: 1269 tgtgttgtagtatccagcggttagctcagctgcgtgtgacctggtgttgtagtgccagtg 1210
to top
>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence
          Length = 110569

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 440    ggggctgctctgaggactgc 459
              ||||||||||||||||||||
Sbjct: 109675 ggggctgctctgaggactgc 109656
to top
>gb|AC067969.1| Homo sapiens chromosome 19 cosmid R26839 (LLNL-R_228D1), complete
            sequence
          Length = 39170

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 440  ggggctgctctgaggactgc 459
            ||||||||||||||||||||
Sbjct: 4383 ggggctgctctgaggactgc 4364
to top
>emb|Z71550.1|SCYNL274C S.cerevisiae chromosome XIV reading frame ORF YNL274c
          Length = 1884

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  ttcttccattttctttcttg 47
           ||||||||||||||||||||
Sbjct: 228 ttcttccattttctttcttg 247
to top
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tagccagaaaggttctggca 200
              ||||||||||||||||||||
Sbjct: 137742 tagccagaaaggttctggca 137761
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     cagcgacgcgtcgtccagcc 363
               ||||||||||||||||||||
Sbjct: 4213628 cagcgacgcgtcgtccagcc 4213647
to top
>gb|U48485.1|HUMRYR37 Human skeletal muscle ryanodine receptor gene (RYR1), exons 68, 69,
           70, and 71
          Length = 2876

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 440 ggggctgctctgaggactgc 459
           ||||||||||||||||||||
Sbjct: 479 ggggctgctctgaggactgc 460
to top
>emb|AL929586.19| Zebrafish DNA sequence from clone CH211-188I17, complete sequence
          Length = 154808

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     tttcttccattttctttctt 46
              ||||||||||||||||||||
Sbjct: 137962 tttcttccattttctttctt 137981
to top
>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete
             sequence
          Length = 186615

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gttttcttccattttctttc 44
             ||||||||||||||||||||
Sbjct: 16539 gttttcttccattttctttc 16520
to top
>gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complete sequence
          Length = 171663

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tgacatagttgaaggagaaa 290
             ||||||||||||||||||||
Sbjct: 30294 tgacatagttgaaggagaaa 30275
to top
>gb|AC154229.1| Mus musculus BAC clone RP24-155I8 from 17, complete sequence
          Length = 159982

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 439    cggggctgctctgaggactg 458
              ||||||||||||||||||||
Sbjct: 113314 cggggctgctctgaggactg 113295
to top
>emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in linkage group 5, complete
              sequence
          Length = 253220

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ttttcttccattttctttct 45
              ||||||||||||||||||||
Sbjct: 132645 ttttcttccattttctttct 132664
to top
>emb|AL772390.8| Mouse DNA sequence from clone RP23-446N8 on chromosome 4, complete
             sequence
          Length = 59040

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 24    agttttcttccattttctttcttgaatcatct 55
             |||||| |||||||||||||||| ||| ||||
Sbjct: 55825 agtttttttccattttctttcttcaataatct 55794
to top
>emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chromosome 3, complete
              sequence
          Length = 186605

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     tgcttgacacacagcaaaaaatca 100
              |||||||||||||||| |||||||
Sbjct: 172271 tgcttgacacacagcagaaaatca 172248
to top
>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete
             sequence
          Length = 250353

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    caaaaaatcatgtgtatgcg 110
             ||||||||||||||||||||
Sbjct: 18008 caaaaaatcatgtgtatgcg 18027


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,139,183
Number of Sequences: 3902068
Number of extensions: 5139183
Number of successful extensions: 97437
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97213
Number of HSP's gapped (non-prelim): 219
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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