| Clone Name | rbaal10j02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 33724 aattacttgtcgcataaatggataaaaatggatgtatctagaattaaaatacatctagat 33665 Query: 240 a 240 | Sbjct: 33664 a 33664
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 6069 tacttgttgcagaaatggataaaaatggatgtatctagaactaaaatacgtctagata 6012
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 ||||||||||| |||||||| ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 11611 aattacttgtcacataaatgtataaaaatggatgtatctagaattataatacatctagat 11552 Query: 240 a 240 | Sbjct: 11551 a 11551
>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA, complete cds Length = 3429 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 ||||||||||| |||||||| ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 3283 aattacttgtcacataaatgtataaaaatggatgtatctagaattataatacatctagat 3224 Query: 240 a 240 | Sbjct: 3223 a 3223
>gb|BT009606.1| Triticum aestivum clone wre1n.pk0091.d5:fis, full insert mRNA sequence Length = 1469 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 174 gttctaaattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgt 233 |||| |||||||| ||| || ||||||||||||||| ||||||||| ||||||||||| | Sbjct: 1310 gttcgaaattactcgtcacaaaaatggataaaaatggatgtatctacaattaaaatacat 1251 Query: 234 ctagata 240 ||||||| Sbjct: 1250 ctagata 1244
>gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid 69-7-1 Lr21 gene, complete cds; and unknown gene Length = 27960 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 14852 aaatggataaaaaagaatgtatctagaattaaaatacatctagata 14897
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 |||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 36520 aaatggataaaaatgaatgtatctagaactaaaatacatctagata 36565 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatac 231 ||||||||||| ||||||||| ||||| |||||||||||| |||||||| Sbjct: 93560 tacttgtcgcagaaatggatataaatggatgtatctagaactaaaatac 93512 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatct 218 ||||||||| | |||||||||||| || |||||||| Sbjct: 25738 tacttgtcgaagaaatggataaaagtggatgtatct 25703
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 ||||||||||| || ||||||||||||||| || ||||||||| |||||||| ||||||| Sbjct: 52154 aattacttgtcacacaaatggataaaaatggatatatctagaactaaaatacatctagat 52213 Query: 240 a 240 | Sbjct: 52214 a 52214
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctag 237 ||||||||| | ||||| ||||||||| |||||||||||| |||||||||||||| Sbjct: 196615 tacttgtcggagaaatgcataaaaatggatgtatctagaactaaaatacgtctag 196669
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 590 cataaccttaagcaccgtatctcttcaaaactttgcttagtgctggcataacattatatg 649 |||||||| | ||||| |||||| | | ||||||||||||||||||||| ||||| |||| Sbjct: 6816 cataacctcaggcaccatatctccttagaactttgcttagtgctggcatcacattgtatg 6875 Query: 650 cttgata 656 ||||||| Sbjct: 6876 cttgata 6882
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 590 cataaccttaagcaccgtatctcttcaaaactttgcttagtgctggcataacattatatg 649 |||||||| | ||||| |||||| | | ||||||||||||||||||||| ||||| |||| Sbjct: 124638 cataacctcaggcaccatatctccttagaactttgcttagtgctggcatcacattgtatg 124697 Query: 650 cttgata 656 ||||||| Sbjct: 124698 cttgata 124704
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 590 cataaccttaagcaccgtatctcttcaaaactttgcttagtgctggcataacattatatg 649 |||||||| | ||||| |||||| | | ||||||||||||||||||||| ||||| |||| Sbjct: 19202740 cataacctcaggcaccatatctccttagaactttgcttagtgctggcatcacattgtatg 19202799 Query: 650 cttgata 656 ||||||| Sbjct: 19202800 cttgata 19202806
>dbj|AK067298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K06, full insert sequence Length = 2452 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 590 cataaccttaagcaccgtatctcttcaaaactttgcttagtgctggcataacattatatg 649 |||||||| | ||||| |||||| | | ||||||||||||||||||||| ||||| |||| Sbjct: 1710 cataacctcaggcaccatatctccttagaactttgcttagtgctggcatcacattgtatg 1651 Query: 650 cttgata 656 ||||||| Sbjct: 1650 cttgata 1644
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 692 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 749
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 734 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 791
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 675 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 732
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 679 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 736
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 737 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 794
>gb|AY235463.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2E11) gene, exons 8 through 15, partial sequence Length = 3592 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 732 tacttgtcgtagaaatgtataaaaatggatgtatctagaactaaaatacatctagata 789
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 720 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 777
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 746 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 803
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 743 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 800
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||||||| Sbjct: 722 tacttgtcgtagaaatgcataaaaatggatgtatctagaactaaaatacatctagata 779
>gb|BT009083.1| Triticum aestivum clone wkm1c.pk0004.c7:fis, full insert mRNA sequence Length = 1186 Score = 67.9 bits (34), Expect = 4e-08 Identities = 56/62 (90%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaa-ttaaaatacgtctaga 238 |||||||||||| | |||||| ||||||||||||||||||||| | ||||||||| |||| Sbjct: 883 aattacttgtcgtagaaatgggtaaaaatgaatgtatctagaactaaaaatacgtttaga 942 Query: 239 ta 240 || Sbjct: 943 ta 944
>gb|L41869.1|BLYBGQ6 Hordeum vulgare L. beta-glucosidase (BGQ60) gene, complete cds Length = 4152 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 |||||||||||||| ||||| ||| ||||| ||||||||| || |||||||| ||||||| Sbjct: 3114 aattacttgtcgcaaaaatgaatagaaatggatgtatctataactaaaatacatctagat 3055 Query: 240 a 240 | Sbjct: 3054 a 3054
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete sequence Length = 113510 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgtatctagaattaaaat 229 ||||| ||||||||||||||||||||||||||||| Sbjct: 104641 aaatgtataaaaatgaatgtatctagaattaaaat 104675
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||| | ||||| |||||||||||| ||||||||||||||||| Sbjct: 69880 aaatggaaagaaatggatgtatctagaactaaaatacgtctagata 69835
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||| ||||||| |||||||||||| |||||||| |||||||| Sbjct: 113449 aaatggacaaaaatggatgtatctagaactaaaatacatctagata 113494 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 205 aaatgaatgtatctagaattaaaatacgtctagata 240 |||||||||||||||||||||||||| |||||||| Sbjct: 109515 aaatgaatgtatctagaattaaaataaatctagata 109480
>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds Length = 7963 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||| | ||||| |||||||||||| ||||||||||||||||| Sbjct: 1832 aaatggaaagaaatggatgtatctagaactaaaatacgtctagata 1787
>dbj|AB095006.1| Triticum aestivum Wcor15 gene for chloroplast-targeted COR protein, complete cds Length = 4549 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 183 tacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtcta 236 ||||||||| | ||| ||||||||||| |||||| ||||| ||||||||||||| Sbjct: 1972 tacttgtcggagaaacggataaaaatggatgtatgtagaactaaaatacgtcta 2025
>gb|AY029159.1| Triticum aestivum sucrose-6F-phosphate phosphohydrolase SPP3 mRNA, complete cds Length = 1743 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 186 ttgtcgcataaatggataaaaatgaatgtatct 218 |||||||| |||||||||||||||||||||||| Sbjct: 1700 ttgtcgcaaaaatggataaaaatgaatgtatct 1668
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 187 tgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctaga 238 ||||||| |||||||||||| || ||||||||| || ||||||||| ||||| Sbjct: 116814 tgtcgcagaaatggataaaactggatgtatctaaaactaaaatacgcctaga 116865 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 |||||||||||||||||||| | || || |||| |||||||||| Sbjct: 203652 aaatggataaaaatgaatgtgtataaaactaaagcacgtctagat 203696 Score = 40.1 bits (20), Expect = 9.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgtatctagaattaaaatacgtctaga 238 ||||||||||||| | ||||||||||| | ||||||| ||||| Sbjct: 103174 aaatggataaaaaaggatgtatctagacctgaaatacgcctaga 103217
>gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and glutathione S-transferase 1 genes, complete cds Length = 13710 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 180 aattacttgtcgcataaatggataaaaatgaatgtatctagaattaaaatacgtctagat 239 ||||||||||| || ||| | |||||||||||| ||| || |||||||||| || ||||| Sbjct: 11506 aattacttgtcacaaaaacgaataaaaatgaatatatttaaaattaaaatatgtttagat 11447 Query: 240 a 240 | Sbjct: 11446 a 11446
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 195 aaatggataaaaatgaatgtatctagaattaaaata 230 |||||||||||| ||||||||| ||||| ||||||| Sbjct: 8893 aaatggataaaattgaatgtatttagaactaaaata 8858
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 195 aaatggataaaaatgaatgtatctagaattaaaata 230 |||||||||||||| ||||||| ||||| ||||||| Sbjct: 11607 aaatggataaaaataaatgtatttagaactaaaata 11572
>emb|X13580.1|TAAAM254 Wheat alpha-Amy2/54 gene 5'-region Length = 847 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 205 aaatgaatgtatctagaattaaaatacgtctagata 240 |||||||||||||||||| |||||||| ||||||| Sbjct: 56 aaatgaatgtatctagaactaaaatacaactagata 91
>gb|AY013754.1| Aegilops tauschii glutathione S-transferase gene, complete cds Length = 2453 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 205 aaatgaatgtatctagaattaaaatacgtctagata 240 ||||| |||||||||||| |||||||| |||||||| Sbjct: 1967 aaatggatgtatctagaactaaaatacatctagata 2002
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 204 aaaatgaatgtatctagaattaaaatacgtctagat 239 |||||||||||||||| ||||||||| |||||||| Sbjct: 147740 aaaatgaatgtatctattattaaaataagtctagat 147705 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 204 aaaatgaatgtatctagaattaaaatacgtctagatatgtcta 246 |||||||||||||||| ||||| ||| |||||||||| |||| Sbjct: 147650 aaaatgaatgtatctattattaagataagtctagatatatcta 147608
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 202 taaaaatgaatgtatctagaattaaaatacgtctagata 240 ||||||||| | ||||||||||||||| | ||||||||| Sbjct: 105048 taaaaatgattatatctagaattaaaacaagtctagata 105086
>gb|AC108399.11| Mus musculus chromosome 19, clone RP24-375O7, complete sequence Length = 180312 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 197 atggataaaaatgaatgtatctagaat 223 ||||| ||||||||||||||||||||| Sbjct: 77364 atggaaaaaaatgaatgtatctagaat 77338
>gb|AY251843.1| Euhadra peliomphala pel1 12S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 613 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 aaaaatgaatgtatctagaatta 225 ||||||||||||||||||||||| Sbjct: 28 aaaaatgaatgtatctagaatta 6
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 211 atgtatctagaattaaaatacgtctagata 240 |||||||||||| |||||||| |||||||| Sbjct: 88793 atgtatctagaactaaaatacatctagata 88822
>emb|CR759789.8| Zebrafish DNA sequence from clone CH211-153M1, complete sequence Length = 165831 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 cacataaacaaagcaaaaatat 117 |||||||||||||||||||||| Sbjct: 45428 cacataaacaaagcaaaaatat 45407
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 211 atgtatctagaattaaaatacgtctagata 240 |||||||||||| ||||||| ||||||||| Sbjct: 10771 atgtatctagaactaaaatatgtctagata 10800
>gb|AC154236.2| Mus musculus BAC clone RP24-160E14 from chromosome 17, complete sequence Length = 162390 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cacataaacaaagcaaaaata 116 ||||||||||||||||||||| Sbjct: 107220 cacataaacaaagcaaaaata 107240
>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence Length = 177719 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 aaccaattctctatcattccaatcc 458 ||||||||| ||||||||||||||| Sbjct: 160114 aaccaattccctatcattccaatcc 160090
>gb|AC123801.4| Mus musculus BAC clone RP24-374A1 from chromosome 15, complete sequence Length = 150979 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 tgttaatacactgtttcatacaaac 145 |||||||||| |||||||||||||| Sbjct: 99492 tgttaatacagtgtttcatacaaac 99516
>gb|AC122900.3| Mus musculus BAC clone RP23-39N24 from 15, complete sequence Length = 203855 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 tgttaatacactgtttcatacaaac 145 |||||||||| |||||||||||||| Sbjct: 34756 tgttaatacagtgtttcatacaaac 34780
>gb|BT009295.1| Triticum aestivum clone wlm1.pk0005.d6:fis, full insert mRNA sequence Length = 1948 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 204 aaaatgaatgtatctagaattaaaatacgtctagata 240 |||||| |||||||||||| |||||||| ||| |||| Sbjct: 1889 aaaatggatgtatctagaactaaaatacatcttgata 1853
>gb|AC025156.21| Homo sapiens 3 BAC RP11-494C5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ataaaaatgaatgtatctaga 221 ||||||||||||||||||||| Sbjct: 76000 ataaaaatgaatgtatctaga 75980
>gb|AF314193.1| Drosophila melanogaster Toutatis (tou) gene, complete cds Length = 39574 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 aaacaaagcaaaaatatcctt 121 ||||||||||||||||||||| Sbjct: 6383 aaacaaagcaaaaatatcctt 6403
>gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, region 48A-48C, BAC clone BACR35F01, complete sequence Length = 170869 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 aaacaaagcaaaaatatcctt 121 ||||||||||||||||||||| Sbjct: 27302 aaacaaagcaaaaatatcctt 27282
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 aaacaaagcaaaaatatcctt 121 ||||||||||||||||||||| Sbjct: 67621 aaacaaagcaaaaatatcctt 67601
>gb|AF493559.1| Aegilops speltoides sucrose-phosphatase mRNA, complete cds Length = 1766 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 tggataaaaatgaatgtatct 218 ||||||||||||||||||||| Sbjct: 1734 tggataaaaatgaatgtatct 1714
>emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 in linkage group 17, complete sequence Length = 181677 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 cataaatggataaaaatgaat 212 ||||||||||||||||||||| Sbjct: 99954 cataaatggataaaaatgaat 99934
>gb|AC155237.2| Mus musculus BAC clone RP24-439K11 from 14, complete sequence Length = 170906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 gtctagatatgtctagacact 252 ||||||||||||||||||||| Sbjct: 112561 gtctagatatgtctagacact 112541
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 aaacaaagcaaaaatatcctt 121 ||||||||||||||||||||| Sbjct: 145794 aaacaaagcaaaaatatcctt 145774
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 aattctctatcattccaatcc 458 ||||||||||||||||||||| Sbjct: 87444 aattctctatcattccaatcc 87424
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 taaatggataaaaatgaatg 213 |||||||||||||||||||| Sbjct: 109081 taaatggataaaaatgaatg 109062
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 taaaaatgaatgtatctaga 221 |||||||||||||||||||| Sbjct: 31277 taaaaatgaatgtatctaga 31258
>ref|NM_204560.1| Gallus gallus activin A receptor, type I (ACVR1), mRNA Length = 2792 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agcaaaaatatccttgttaa 126 |||||||||||||||||||| Sbjct: 1146 agcaaaaatatccttgttaa 1165
>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence Length = 176113 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 acaaagcaaaaatatccttg 122 |||||||||||||||||||| Sbjct: 125686 acaaagcaaaaatatccttg 125667
>gb|AC092238.2| Drosophila melanogaster clone BACR03D18, complete sequence Length = 184681 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 taaacaaagcaaaaatatcc 119 |||||||||||||||||||| Sbjct: 52181 taaacaaagcaaaaatatcc 52200
>gb|AC122446.4| Mus musculus BAC clone RP24-240N12 from chromosome 17, complete sequence Length = 182820 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgt 214 |||||||||||||||||||| Sbjct: 24362 aaatggataaaaatgaatgt 24381
>gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete sequence Length = 190901 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tttccaggtattagtaaatt 37 |||||||||||||||||||| Sbjct: 162690 tttccaggtattagtaaatt 162671
>gb|AC005022.1| Homo sapiens BAC clone GS1-371A6 from 7, complete sequence Length = 103565 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 aatatccttgttaatacactgttt 136 ||||||||| |||||||||||||| Sbjct: 63768 aatatcctttttaatacactgttt 63745
>gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, complete sequence Length = 242249 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aaaatatccttgttaataca 130 |||||||||||||||||||| Sbjct: 82861 aaaatatccttgttaataca 82880
>gb|AC083893.33| Mus musculus strain C57BL/6J clone rp23-21l18 map 4, complete sequence Length = 244349 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 aaatggataaaaatgaatgt 214 |||||||||||||||||||| Sbjct: 74230 aaatggataaaaatgaatgt 74211
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 acataaacaaagcaaaaata 116 |||||||||||||||||||| Sbjct: 96389 acataaacaaagcaaaaata 96370
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 taaatggataaaaatgaatg 213 |||||||||||||||||||| Sbjct: 60008 taaatggataaaaatgaatg 59989
>emb|AL033525.10|HS1108H3 Human DNA sequence from clone RP5-1108H3 on chromosome 1p35.1-36.31 Contains ESTs, STSs, GSSs and an ata repeat polymorphism, complete sequence Length = 164901 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 aatgtatctagaattaaaatacgt 233 ||||||| |||||||||||||||| Sbjct: 147421 aatgtatgtagaattaaaatacgt 147398
>emb|CR936947.2| Medicago truncatula chromosome 5 clone mte1-85h10, COMPLETE SEQUENCE Length = 136310 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caaaaatatccttgttaata 128 |||||||||||||||||||| Sbjct: 102203 caaaaatatccttgttaata 102184
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 acaaacgtcccgaaatgcaggtcg 163 |||||||| ||||||||||||||| Sbjct: 1640021 acaaacgtaccgaaatgcaggtcg 1639998
>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17 Length = 147295 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 atccttgcgcagaaataaac 377 |||||||||||||||||||| Sbjct: 83393 atccttgcgcagaaataaac 83412
>emb|AJ318064.2|GGA318064 Gallus gallus mRNA for activin receptor type I precursor (ACVR1 gene) Length = 2792 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agcaaaaatatccttgttaa 126 |||||||||||||||||||| Sbjct: 1146 agcaaaaatatccttgttaa 1165
>emb|BX640496.10| Mouse DNA sequence from clone RP23-379O23 on chromosome 4, complete sequence Length = 172320 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgt 214 |||||||||||||||||||| Sbjct: 5322 aaatggataaaaatgaatgt 5341
>gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205209 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cataaatggataaaaatgaa 211 |||||||||||||||||||| Sbjct: 56006 cataaatggataaaaatgaa 56025
>ref|NM_078845.3| Drosophila melanogaster metabotropic GABA-B receptor subtype 1 CG15274-RA (GABA-B-R1), mRNA Length = 2757 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 taaacaaagcaaaaatatcc 119 |||||||||||||||||||| Sbjct: 294 taaacaaagcaaaaatatcc 275
>dbj|AK143095.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130020K17 product:unclassifiable, full insert sequence Length = 5403 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 taaatggataaaaatgaatg 213 |||||||||||||||||||| Sbjct: 713 taaatggataaaaatgaatg 732
>gb|AC104122.2| Homo sapiens chromosome 5 clone RP11-410P18, complete sequence Length = 142636 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cataaacaaagcaaaaatat 117 |||||||||||||||||||| Sbjct: 110780 cataaacaaagcaaaaatat 110799
>gb|AC020936.5| Homo sapiens chromosome 5 clone CTD-2291O8, complete sequence Length = 162884 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gatatgttgtaagcttgtaa 548 |||||||||||||||||||| Sbjct: 17443 gatatgttgtaagcttgtaa 17424
>gb|AC093510.2| Homo sapiens chromosome 5 clone CTD-2373J6, complete sequence Length = 125933 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cataaacaaagcaaaaatat 117 |||||||||||||||||||| Sbjct: 36296 cataaacaaagcaaaaatat 36315
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 taaccctactacacctacag 78 |||||||||||||||||||| Sbjct: 361952 taaccctactacacctacag 361933
>gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold Length = 355851 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 tacacataaacaaagcaaaaatat 117 |||||||| ||||||||||||||| Sbjct: 181068 tacacatatacaaagcaaaaatat 181091
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tttccaggtattagtaaatt 37 |||||||||||||||||||| Sbjct: 1861544 tttccaggtattagtaaatt 1861525
>gb|AC016558.6| Homo sapiens chromosome 5 clone CTC-420I8, complete sequence Length = 162884 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gatatgttgtaagcttgtaa 548 |||||||||||||||||||| Sbjct: 17443 gatatgttgtaagcttgtaa 17424
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 aagaaagatggatatccttg 364 |||||||||||||||||||| Sbjct: 2376968 aagaaagatggatatccttg 2376949
>gb|AC020938.4| Homo sapiens chromosome 5 clone CTD-2300O5, complete sequence Length = 57339 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gatatgttgtaagcttgtaa 548 |||||||||||||||||||| Sbjct: 39804 gatatgttgtaagcttgtaa 39785
>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213412 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cataaatggataaaaatgaa 211 |||||||||||||||||||| Sbjct: 150530 cataaatggataaaaatgaa 150549
>gb|AF318272.1|AF318272 Drosophila melanogaster metabotropic GABA-B receptor subtype 1 (GABA-B-R1) mRNA, complete cds Length = 2523 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 taaacaaagcaaaaatatcc 119 |||||||||||||||||||| Sbjct: 60 taaacaaagcaaaaatatcc 41
>gb|DQ355219.1| Thinopyrum bessarabicum plastid acetyl-CoA carboxylase gene, partial cds; nuclear gene for plastid product Length = 1542 Score = 40.1 bits (20), Expect = 9.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 205 aaatgaatgtatctagaattaaaatacgtctagata 240 ||||| |||||||||| | | ||||||||||||||| Sbjct: 92 aaatggatgtatctagcactgaaatacgtctagata 127
>gb|AC154346.3| Mus musculus BAC clone RP24-503E4 from chromosome 17, complete sequence Length = 167603 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aaatggataaaaatgaatgt 214 |||||||||||||||||||| Sbjct: 140945 aaatggataaaaatgaatgt 140964
>emb|AJ133765.1|STU133765 Solanum tuberosum invGE and invGF genes Length = 9016 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tattagtaaattattacatcaacc 49 |||| ||||||||||||||||||| Sbjct: 54 tattcgtaaattattacatcaacc 77
>gb|U38622.1|GGU38622 Gallus gallus type I TGF B receptor mRNA, complete cds Length = 1758 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agcaaaaatatccttgttaa 126 |||||||||||||||||||| Sbjct: 1108 agcaaaaatatccttgttaa 1127
>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete sequence Length = 265413 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 taaacaaagcaaaaatatcc 119 |||||||||||||||||||| Sbjct: 20927 taaacaaagcaaaaatatcc 20908
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 taaatggataaaaatgaatg 213 |||||||||||||||||||| Sbjct: 177798 taaatggataaaaatgaatg 177817
>gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 acaaagcaaaaatatccttg 122 |||||||||||||||||||| Sbjct: 44951 acaaagcaaaaatatccttg 44932 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,356,596 Number of Sequences: 3902068 Number of extensions: 5356596 Number of successful extensions: 108306 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108029 Number of HSP's gapped (non-prelim): 277 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)