ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10i11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LDOX_ARATH (Q96323) Leucoanthocyanidin dioxygenase (EC 1.14.11.1... 37 0.070
2FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC... 35 0.15
3SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... 34 0.45
4FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC... 33 0.77
5SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs... 32 2.2
6HIS8_CORDI (P60999) Histidinol-phosphate aminotransferase (EC 2.... 32 2.2
7MDM20_YEAST (Q12387) N-terminal acetyltransferase B complex subu... 30 5.0
8ACCO3_CUCME (P54847) 1-aminocyclopropane-1-carboxylate oxidase 3... 30 8.5
9ADPRH_MOUSE (P54923) [Protein ADP-ribosylarginine] hydrolase (EC... 30 8.5

>LDOX_ARATH (Q96323) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase) (Anthocyanidin synthase) (ANS)
          Length = 356

 Score = 36.6 bits (83), Expect = 0.070
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
 Frame = -3

Query: 629 HYDLNFLTIHGRSRFPGLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEV 450
           H D++ LT    +  PGL ++   GK +  K     +++  G  LE L+ G+  + +H  
Sbjct: 232 HTDVSALTFILHNMVPGLQLFYE-GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRG 290

Query: 449 VVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDA-TLKPLGHFAEAPNAHSYPPICAGE 273
           +V K  +              RIS  +F     D   LKPL       +   +PP    +
Sbjct: 291 LVNKEKV--------------RISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQ 336

Query: 272 YVEQEL 255
           ++E +L
Sbjct: 337 HIEHKL 342



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>FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS) (Fragment)
          Length = 291

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 28/131 (21%), Positives = 54/131 (41%)
 Frame = -3

Query: 629 HYDLNFLTIHGRSRFPGLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEV 450
           H D+N LT+   +  PGL ++  +   +EV+     +++  G Q+  L+ G+    +H+ 
Sbjct: 175 HTDINGLTLIITNEIPGLQVF-KDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKT 233

Query: 449 VVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDATLKPLGHFAEAPNAHSYPPICAGEY 270
            V           KE+ R  W +          D  + PL       +   + PI   +Y
Sbjct: 234 TVD----------KEKTRMSWPV----LVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDY 279

Query: 269 VEQELSAINLK 237
           V  +++ +  K
Sbjct: 280 VHNKITFLKNK 290



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>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
 Frame = -2

Query: 426 GNRTS*RAEPKLVEDLINTILAHCFRCDAQAIGPLC*STQCS*LS-----AYMCRGVCGT 262
           G   S R  P       N +   C RC+A  IG  C  T+CS  +     A++C   CG+
Sbjct: 324 GEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRC-ETKCSNGTYGEDCAFVCAD-CGS 381

Query: 261 RALGDQSEREGCTLGTHRPPVNLT 190
                QS R  C+ G H P  N+T
Sbjct: 382 GHCDFQSGRCLCSPGVHGPHCNVT 405



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>FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS)
          Length = 337

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 30/121 (24%), Positives = 49/121 (40%)
 Frame = -3

Query: 629 HYDLNFLTIHGRSRFPGLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEV 450
           H D++ +TI   +   GL     +G+  +VK     L+I  G Q+E ++ G+  + +H  
Sbjct: 223 HTDMSTVTILVPNDVQGLQA-CKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRT 281

Query: 449 VVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDATLKPLGHFAEAPNAHSYPPICAGEY 270
            V              N+   RIS  +F    +D  + P      A N   Y     G+Y
Sbjct: 282 TV--------------NKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPKYKTKKYGDY 327

Query: 269 V 267
           V
Sbjct: 328 V 328



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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -2

Query: 375 NTILAHCFRCDAQAIGPLC*STQCS*LS-----AYMCRGVCGTRALGDQSEREGCTLGTH 211
           N +   C  C+A  IG  C  T+CS  +     A++C   CG+     QS R  C+ G H
Sbjct: 333 NHVTGKCTHCNAGWIGDRC-ETKCSNGTYGEDCAFVCSD-CGSGHCDFQSGRCLCSPGVH 390

Query: 210 RPPVNLT 190
            P  N+T
Sbjct: 391 GPHCNVT 397



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>HIS8_CORDI (P60999) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 366

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +2

Query: 560 YLTKCSGLEIYYDRVWSRN*DHNGTQQTL 646
           Y+TKC+G+ + Y+++W+ N  +   QQ L
Sbjct: 78  YITKCTGVPVTYEQLWAANGSNEVLQQLL 106



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>MDM20_YEAST (Q12387) N-terminal acetyltransferase B complex subunit MDM20 (NatB|
           complex subunit MDM20) (Mitochondrial distribution and
           morphology protein 20) (Dislikes extra CIN8 protein 1)
          Length = 796

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = +3

Query: 111 TKLNEDTSISLDYRNPRSDHRKQINEPSD*PVVCVCLECNLPFQIDRRELLFHILPGTYR 290
           T  N DTS++L  +N    H K +N P     VC  L   +   +D  EL+ +++   Y+
Sbjct: 220 TFANFDTSVNLYLKNFILKHTKLLNSPQKLFEVCSKL---IEKGLDDYELITNLIDAAYK 276

Query: 291 RITMSIGCFSKVAQWLERRIGSN 359
                     +V QW++  +G +
Sbjct: 277 LSKSK----DEVKQWIDENLGDS 295



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>ACCO3_CUCME (P54847) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)|
           (ACC oxidase 3) (Ethylene-forming enzyme) (EFE)
          Length = 320

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
 Frame = -3

Query: 581 GLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEVVVTKRTLEAIELAKEQ 402
           GL++ L +GK ++V      ++I  G QLE +T G+  + MH V+           A+E 
Sbjct: 195 GLHV-LKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVI-----------AQED 242

Query: 401 NRSLWRISSTLFSHIASDATLKPLGHFAEAPNAHS--YPPICAGEYVE 264
                R+S   F +  +DA + P     E     +  YP     +Y++
Sbjct: 243 GN---RMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMK 287



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>ADPRH_MOUSE (P54923) [Protein ADP-ribosylarginine] hydrolase (EC 3.2.2.19)|
           (ADP-ribosylarginine hydrolase) (ADP-ribose-L-arginine
           cleaving enzyme)
          Length = 362

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = -3

Query: 494 EWLTGGECLAGMHEVVVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDATLKPLGHFAE 315
           E++  GE +   H+ +     LEAI++A+      WR+S     H+A+   L   G   +
Sbjct: 30  EFIRDGETI---HQQLAQMGDLEAIDVAR------WRVSDDTVMHLATAEALMEAGQSPD 80

Query: 314 APNAHS 297
            P  +S
Sbjct: 81  LPRLYS 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,105,908
Number of Sequences: 219361
Number of extensions: 2069275
Number of successful extensions: 4403
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4400
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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