| Clone Name | rbaal10i11 |
|---|---|
| Clone Library Name | barley_pub |
>LDOX_ARATH (Q96323) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) (ANS) Length = 356 Score = 36.6 bits (83), Expect = 0.070 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 1/126 (0%) Frame = -3 Query: 629 HYDLNFLTIHGRSRFPGLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEV 450 H D++ LT + PGL ++ GK + K +++ G LE L+ G+ + +H Sbjct: 232 HTDVSALTFILHNMVPGLQLFYE-GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRG 290 Query: 449 VVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDA-TLKPLGHFAEAPNAHSYPPICAGE 273 +V K + RIS +F D LKPL + +PP + Sbjct: 291 LVNKEKV--------------RISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQ 336 Query: 272 YVEQEL 255 ++E +L Sbjct: 337 HIEHKL 342
>FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) (Fragment) Length = 291 Score = 35.4 bits (80), Expect = 0.15 Identities = 28/131 (21%), Positives = 54/131 (41%) Frame = -3 Query: 629 HYDLNFLTIHGRSRFPGLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEV 450 H D+N LT+ + PGL ++ + +EV+ +++ G Q+ L+ G+ +H+ Sbjct: 175 HTDINGLTLIITNEIPGLQVF-KDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKT 233 Query: 449 VVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDATLKPLGHFAEAPNAHSYPPICAGEY 270 V KE+ R W + D + PL + + PI +Y Sbjct: 234 TVD----------KEKTRMSWPV----LVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDY 279 Query: 269 VEQELSAINLK 237 V +++ + K Sbjct: 280 VHNKITFLKNK 290
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 33.9 bits (76), Expect = 0.45 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Frame = -2 Query: 426 GNRTS*RAEPKLVEDLINTILAHCFRCDAQAIGPLC*STQCS*LS-----AYMCRGVCGT 262 G S R P N + C RC+A IG C T+CS + A++C CG+ Sbjct: 324 GEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDRC-ETKCSNGTYGEDCAFVCAD-CGS 381 Query: 261 RALGDQSEREGCTLGTHRPPVNLT 190 QS R C+ G H P N+T Sbjct: 382 GHCDFQSGRCLCSPGVHGPHCNVT 405
>FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 337 Score = 33.1 bits (74), Expect = 0.77 Identities = 30/121 (24%), Positives = 49/121 (40%) Frame = -3 Query: 629 HYDLNFLTIHGRSRFPGLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEV 450 H D++ +TI + GL +G+ +VK L+I G Q+E ++ G+ + +H Sbjct: 223 HTDMSTVTILVPNDVQGLQA-CKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRT 281 Query: 449 VVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDATLKPLGHFAEAPNAHSYPPICAGEY 270 V N+ RIS +F +D + P A N Y G+Y Sbjct: 282 TV--------------NKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPKYKTKKYGDY 327 Query: 269 V 267 V Sbjct: 328 V 328
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Frame = -2 Query: 375 NTILAHCFRCDAQAIGPLC*STQCS*LS-----AYMCRGVCGTRALGDQSEREGCTLGTH 211 N + C C+A IG C T+CS + A++C CG+ QS R C+ G H Sbjct: 333 NHVTGKCTHCNAGWIGDRC-ETKCSNGTYGEDCAFVCSD-CGSGHCDFQSGRCLCSPGVH 390 Query: 210 RPPVNLT 190 P N+T Sbjct: 391 GPHCNVT 397
>HIS8_CORDI (P60999) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 366 Score = 31.6 bits (70), Expect = 2.2 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +2 Query: 560 YLTKCSGLEIYYDRVWSRN*DHNGTQQTL 646 Y+TKC+G+ + Y+++W+ N + QQ L Sbjct: 78 YITKCTGVPVTYEQLWAANGSNEVLQQLL 106
>MDM20_YEAST (Q12387) N-terminal acetyltransferase B complex subunit MDM20 (NatB| complex subunit MDM20) (Mitochondrial distribution and morphology protein 20) (Dislikes extra CIN8 protein 1) Length = 796 Score = 30.4 bits (67), Expect = 5.0 Identities = 22/83 (26%), Positives = 38/83 (45%) Frame = +3 Query: 111 TKLNEDTSISLDYRNPRSDHRKQINEPSD*PVVCVCLECNLPFQIDRRELLFHILPGTYR 290 T N DTS++L +N H K +N P VC L + +D EL+ +++ Y+ Sbjct: 220 TFANFDTSVNLYLKNFILKHTKLLNSPQKLFEVCSKL---IEKGLDDYELITNLIDAAYK 276 Query: 291 RITMSIGCFSKVAQWLERRIGSN 359 +V QW++ +G + Sbjct: 277 LSKSK----DEVKQWIDENLGDS 295
>ACCO3_CUCME (P54847) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)| (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 29.6 bits (65), Expect = 8.5 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%) Frame = -3 Query: 581 GLNIWLSNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEVVVTKRTLEAIELAKEQ 402 GL++ L +GK ++V ++I G QLE +T G+ + MH V+ A+E Sbjct: 195 GLHV-LKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVI-----------AQED 242 Query: 401 NRSLWRISSTLFSHIASDATLKPLGHFAEAPNAHS--YPPICAGEYVE 264 R+S F + +DA + P E + YP +Y++ Sbjct: 243 GN---RMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMK 287
>ADPRH_MOUSE (P54923) [Protein ADP-ribosylarginine] hydrolase (EC 3.2.2.19)| (ADP-ribosylarginine hydrolase) (ADP-ribose-L-arginine cleaving enzyme) Length = 362 Score = 29.6 bits (65), Expect = 8.5 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = -3 Query: 494 EWLTGGECLAGMHEVVVTKRTLEAIELAKEQNRSLWRISSTLFSHIASDATLKPLGHFAE 315 E++ GE + H+ + LEAI++A+ WR+S H+A+ L G + Sbjct: 30 EFIRDGETI---HQQLAQMGDLEAIDVAR------WRVSDDTVMHLATAEALMEAGQSPD 80 Query: 314 APNAHS 297 P +S Sbjct: 81 LPRLYS 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,105,908 Number of Sequences: 219361 Number of extensions: 2069275 Number of successful extensions: 4403 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4289 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4400 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)