No.
Definition
Score (bits)
E Value
1 ref|XM_468292.1| Oryza sativa (japonica cultivar-group), mRNA
264
3e-67
2 dbj|AK073740.1| Oryza sativa (japonica cultivar-group) cDNA clon...
264
3e-67
3 gb|BT017208.1| Zea mays clone EL01N0372A05.c mRNA sequence
161
3e-36
4 gb|AY105709.1| Zea mays PCO116780 mRNA sequence
151
3e-33
5 gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare str...
131
3e-27
6 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
131
3e-27
7 dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic D...
131
3e-27
8 dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic D...
131
3e-27
9 dbj|AK063891.1| Oryza sativa (japonica cultivar-group) cDNA clon...
88
4e-14
10 emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chr...
44
0.55
11 ref|XM_507878.1| PREDICTED: Pan troglodytes similar to DC-TM4F2 ...
40
8.7
12 gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds
40
8.7
13 gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, com...
40
8.7
14 gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883
40
8.7
15 gb|BC093016.1| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC...
40
8.7
16 gb|AF311903.1| Homo sapiens DC-TM4F2 precursor, mRNA, complete cds
40
8.7
17 emb|AL136638.1|HSM801611 Homo sapiens mRNA; cDNA DKFZp564B1037 (...
40
8.7
18 emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (...
40
8.7
19 dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595
40
8.7
20 dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
40
8.7
21 dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
40
8.7
22 ref|NM_030927.1| Homo sapiens tetraspanin 14 (TSPAN14), mRNA
40
8.7
23 gb|BC002920.2| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC...
40
8.7
24 gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Ca...
40
8.7
25 dbj|AP004310.1| Synechocystis sp. PCC 6803 plasmid pSYSM DNA, co...
40
8.7
26 dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone...
40
8.7
>gb|AC069158.6 | Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0049O12, from chromosome 2, complete sequence
Length = 155154
Score = 131 bits (66), Expect = 3e-27
Identities = 93/102 (91%)
Strand = Plus / Minus
Query: 466 caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 106935 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 106876
Query: 526 actagcaggtagaagatcatcaattttgtgccatgagatctc 567
|| |||||| || || ||||| || |||||||||||||||||
Sbjct: 106875 accagcaggaaggagttcatcgatgttgtgccatgagatctc 106834
Score = 73.8 bits (37), Expect = 6e-10
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 168 tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 107736 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 107677
Query: 228 cgaatctgaagcttctgaagctttt 252
|||| |||||| ||| |||||||||
Sbjct: 107676 cgaacctgaagtttcggaagctttt 107652
Score = 60.0 bits (30), Expect = 9e-06
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
||||||||||| |||||||||||| |||||||| |||||| | || |||| |||
Sbjct: 107624 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 107565
Query: 376 cttcgctttccacacagtacct 397
||||||||||||||||||||||
Sbjct: 107564 cttcgctttccacacagtacct 107543
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 394 acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
|||||||| ||| |||||||| |||||||| |||| ||||||||| ||||||| ||
Sbjct: 107173 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 107114
Query: 454 ttttagaccc 463
||||||||||
Sbjct: 107113 ttttagaccc 107104
Score = 44.1 bits (22), Expect = 0.55
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 579 ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
|||||||||||||| || ||||||||||| |||||||||
Sbjct: 106240 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 106200
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 131 bits (66), Expect = 3e-27
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 466 caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 34398171 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 34398230
Query: 526 actagcaggtagaagatcatcaattttgtgccatgagatctc 567
|| |||||| || || ||||| || |||||||||||||||||
Sbjct: 34398231 accagcaggaaggagttcatcgatgttgtgccatgagatctc 34398272
Score = 73.8 bits (37), Expect = 6e-10
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 168 tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 34397370 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 34397429
Query: 228 cgaatctgaagcttctgaagctttt 252
|||| |||||| ||| |||||||||
Sbjct: 34397430 cgaacctgaagtttcggaagctttt 34397454
Score = 60.0 bits (30), Expect = 9e-06
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
||||||||||| |||||||||||| |||||||| |||||| | || |||| |||
Sbjct: 34397482 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 34397541
Query: 376 cttcgctttccacacagtacct 397
||||||||||||||||||||||
Sbjct: 34397542 cttcgctttccacacagtacct 34397563
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 394 acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
|||||||| ||| |||||||| |||||||| |||| ||||||||| ||||||| ||
Sbjct: 34397933 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 34397992
Query: 454 ttttagaccc 463
||||||||||
Sbjct: 34397993 ttttagaccc 34398002
Score = 44.1 bits (22), Expect = 0.55
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 579 ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
|||||||||||||| || ||||||||||| |||||||||
Sbjct: 34398866 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 34398906
>dbj|AP004240.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1548_F12
Length = 118814
Score = 131 bits (66), Expect = 3e-27
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 466 caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 95818 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 95877
Query: 526 actagcaggtagaagatcatcaattttgtgccatgagatctc 567
|| |||||| || || ||||| || |||||||||||||||||
Sbjct: 95878 accagcaggaaggagttcatcgatgttgtgccatgagatctc 95919
Score = 73.8 bits (37), Expect = 6e-10
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 168 tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 95017 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 95076
Query: 228 cgaatctgaagcttctgaagctttt 252
|||| |||||| ||| |||||||||
Sbjct: 95077 cgaacctgaagtttcggaagctttt 95101
Score = 60.0 bits (30), Expect = 9e-06
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
||||||||||| |||||||||||| |||||||| |||||| | || |||| |||
Sbjct: 95129 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 95188
Query: 376 cttcgctttccacacagtacct 397
||||||||||||||||||||||
Sbjct: 95189 cttcgctttccacacagtacct 95210
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 394 acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
|||||||| ||| |||||||| |||||||| |||| ||||||||| ||||||| ||
Sbjct: 95580 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 95639
Query: 454 ttttagaccc 463
||||||||||
Sbjct: 95640 ttttagaccc 95649
Score = 44.1 bits (22), Expect = 0.55
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 579 ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
|||||||||||||| || ||||||||||| |||||||||
Sbjct: 96513 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 96553
>dbj|AP004153.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1111_C07
Length = 115190
Score = 131 bits (66), Expect = 3e-27
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 466 caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 14413 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 14472
Query: 526 actagcaggtagaagatcatcaattttgtgccatgagatctc 567
|| |||||| || || ||||| || |||||||||||||||||
Sbjct: 14473 accagcaggaaggagttcatcgatgttgtgccatgagatctc 14514
Score = 73.8 bits (37), Expect = 6e-10
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 168 tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 13612 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 13671
Query: 228 cgaatctgaagcttctgaagctttt 252
|||| |||||| ||| |||||||||
Sbjct: 13672 cgaacctgaagtttcggaagctttt 13696
Score = 60.0 bits (30), Expect = 9e-06
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
||||||||||| |||||||||||| |||||||| |||||| | || |||| |||
Sbjct: 13724 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 13783
Query: 376 cttcgctttccacacagtacct 397
||||||||||||||||||||||
Sbjct: 13784 cttcgctttccacacagtacct 13805
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 394 acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
|||||||| ||| |||||||| |||||||| |||| ||||||||| ||||||| ||
Sbjct: 14175 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 14234
Query: 454 ttttagaccc 463
||||||||||
Sbjct: 14235 ttttagaccc 14244
Score = 44.1 bits (22), Expect = 0.55
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 579 ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
|||||||||||||| || ||||||||||| |||||||||
Sbjct: 15108 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 15148
>dbj|AP006138.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT37A17, TM0240,
complete sequence
Length = 121317
Score = 40.1 bits (20), Expect = 8.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 agcttctgaagcttttgcca 256
||||||||||||||||||||
Sbjct: 118760 agcttctgaagcttttgcca 118779
Score = 40.1 bits (20), Expect = 8.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 237 agcttctgaagcttttgcca 256
||||||||||||||||||||
Sbjct: 107909 agcttctgaagcttttgcca 107928
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,320,942
Number of Sequences: 3902068
Number of extensions: 4320942
Number of successful extensions: 73650
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73528
Number of HSP's gapped (non-prelim): 116
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)