ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal10i04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468292.1| Oryza sativa (japonica cultivar-group), mRNA 264 3e-67
2dbj|AK073740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 3e-67
3gb|BT017208.1| Zea mays clone EL01N0372A05.c mRNA sequence 161 3e-36
4gb|AY105709.1| Zea mays PCO116780 mRNA sequence 151 3e-33
5gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare str... 131 3e-27
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
7dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
8dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
9dbj|AK063891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
10emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chr... 44 0.55
11ref|XM_507878.1| PREDICTED: Pan troglodytes similar to DC-TM4F2 ... 40 8.7
12gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds 40 8.7
13gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, com... 40 8.7
14gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883 40 8.7
15gb|BC093016.1| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC... 40 8.7
16gb|AF311903.1| Homo sapiens DC-TM4F2 precursor, mRNA, complete cds 40 8.7
17emb|AL136638.1|HSM801611 Homo sapiens mRNA; cDNA DKFZp564B1037 (... 40 8.7
18emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (... 40 8.7
19dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595 40 8.7
20dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 8.7
21dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 40 8.7
22ref|NM_030927.1| Homo sapiens tetraspanin 14 (TSPAN14), mRNA 40 8.7
23gb|BC002920.2| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC... 40 8.7
24gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Ca... 40 8.7
25dbj|AP004310.1| Synechocystis sp. PCC 6803 plasmid pSYSM DNA, co... 40 8.7
26dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.7

>ref|XM_468292.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1238

 Score =  264 bits (133), Expect = 3e-67
 Identities = 262/304 (86%), Gaps = 1/304 (0%)
 Strand = Plus / Minus

                                                                       
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
           ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 963 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 904

                                                                       
Query: 376 cttcgctttccacacagtacctctagtagatgtgtctgacttctgatatactggggaccg 435
           |||||||||||||||||||||||||| ||| |||||||| ||||||||   ||||   ||
Sbjct: 903 cttcgctttccacacagtacctctagcagacgtgtctgatttctgatactgtgggtgacg 844

                                                                       
Query: 436 atgtgtgcctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcat 495
           ||||||| ||||||| ||||||||||||  |||||||||||| |||||||| ||||||||
Sbjct: 843 atgtgtggctatccaggcttttagaccctgcaaaaatggtgcgaccatatagagcttcat 784

                                                                       
Query: 496 cccattcactccacgagatattgcatcatcactagcaggtagaagatcatcaattttgtg 555
           |||||||||||||||||||||||| ||||||| |||||| || || ||||| || |||||
Sbjct: 783 cccattcactccacgagatattgcgtcatcaccagcaggaaggagttcatcgatgttgtg 724

                                                                       
Query: 556 ccatgagatctcactgatctcttttcttagtttgaggtgcgaaaacagtatcttncttaa 615
           |||||||||||||||||||||  |||||||||||||| || |||||||||||   |||||
Sbjct: 723 ccatgagatctcactgatctc-cttcttagtttgaggcgcaaaaacagtatcccccttaa 665

               
Query: 616 cacc 619
           ||||
Sbjct: 664 cacc 661



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                        
Query: 168  tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
            ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 1075 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 1016

                                     
Query: 228  cgaatctgaagcttctgaagctttt 252
            |||| |||||| ||| |||||||||
Sbjct: 1015 cgaacctgaagtttcggaagctttt 991



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>dbj|AK073740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K03, full
           insert sequence
          Length = 1238

 Score =  264 bits (133), Expect = 3e-67
 Identities = 262/304 (86%), Gaps = 1/304 (0%)
 Strand = Plus / Minus

                                                                       
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
           ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 963 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 904

                                                                       
Query: 376 cttcgctttccacacagtacctctagtagatgtgtctgacttctgatatactggggaccg 435
           |||||||||||||||||||||||||| ||| |||||||| ||||||||   ||||   ||
Sbjct: 903 cttcgctttccacacagtacctctagcagacgtgtctgatttctgatactgtgggtgacg 844

                                                                       
Query: 436 atgtgtgcctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcat 495
           ||||||| ||||||| ||||||||||||  |||||||||||| |||||||| ||||||||
Sbjct: 843 atgtgtggctatccaggcttttagaccctgcaaaaatggtgcgaccatatagagcttcat 784

                                                                       
Query: 496 cccattcactccacgagatattgcatcatcactagcaggtagaagatcatcaattttgtg 555
           |||||||||||||||||||||||| ||||||| |||||| || || ||||| || |||||
Sbjct: 783 cccattcactccacgagatattgcgtcatcaccagcaggaaggagttcatcgatgttgtg 724

                                                                       
Query: 556 ccatgagatctcactgatctcttttcttagtttgaggtgcgaaaacagtatcttncttaa 615
           |||||||||||||||||||||  |||||||||||||| || |||||||||||   |||||
Sbjct: 723 ccatgagatctcactgatctc-cttcttagtttgaggcgcaaaaacagtatcccccttaa 665

               
Query: 616 cacc 619
           ||||
Sbjct: 664 cacc 661



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                        
Query: 168  tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
            ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 1075 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 1016

                                     
Query: 228  cgaatctgaagcttctgaagctttt 252
            |||| |||||| ||| |||||||||
Sbjct: 1015 cgaacctgaagtttcggaagctttt 991



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>gb|BT017208.1| Zea mays clone EL01N0372A05.c mRNA sequence
          Length = 887

 Score =  161 bits (81), Expect = 3e-36
 Identities = 187/221 (84%), Gaps = 1/221 (0%)
 Strand = Plus / Minus

                                                                       
Query: 384 tccacacagtacctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgc 443
           |||||||||||||||||| |||||| ||||  |||||||  | ||| |   |||||||| 
Sbjct: 240 tccacacagtacctctagcagatgtctctggtttctgatgcagtggtggaggatgtgtgg 181

                                                                       
Query: 444 ctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcatcccattca 503
           | ||||| || || |||||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 180 caatccaagccttaagacccgtcaaaaatggtgcaaccatgtacagcttcattccattca 121

                                                                       
Query: 504 ctccacgagatattgcatcatcactagcaggtagaagatcatcaattttgtgccatgaga 563
           || ||||||||| ||||||||||||||| ||||  || ||||||||| |||||||||| |
Sbjct: 120 ctgcacgagatactgcatcatcactagctggtaagaggtcatcaattctgtgccatgaaa 61

                                                    
Query: 564 tctcactgatctcttttcttagtttgaggtgcgaaaacagt 604
           | |||||||| ||  ||||| ||||||||||| || |||||
Sbjct: 60  tttcactgatttc-cttcttggtttgaggtgcaaacacagt 21



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 133 gtctatacacatcaagggtacaggagttgatgatctgtcaggatcctaggtacgcagaaa 192
           ||||||||||||||||||| |||| || |||| |  ||||||||||||||| || || ||
Sbjct: 452 gtctatacacatcaagggtgcaggtgtggatgcttcgtcaggatcctaggtgcgtaggaa 393

                                                                    
Query: 193 ggaagcatcaatggactgcagaatactggccgtatcgaatctgaagcttctgaagct 249
           |||||| || |||| |||||| || || || || || || |||||| ||||||||||
Sbjct: 392 ggaagcctccatggcctgcaggatgcttgcggtgtcaaacctgaagtttctgaagct 336



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>gb|AY105709.1| Zea mays PCO116780 mRNA sequence
          Length = 1656

 Score =  151 bits (76), Expect = 3e-33
 Identities = 208/251 (82%), Gaps = 1/251 (0%)
 Strand = Plus / Minus

                                                                        
Query: 384  tccacacagtacctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgc 443
            |||||||||||||||||| |||||| ||||  |||||||  | ||| |   |||||||| 
Sbjct: 1083 tccacacagtacctctagcagatgtctctggtttctgatgcagtggtggaggatgtgtgg 1024

                                                                        
Query: 444  ctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcatcccattca 503
            | ||||| || || ||||||||||||||||| |||||||| || |||||||| |||||||
Sbjct: 1023 caatccaagccttaagacccgtcaaaaatggcgcaaccatgtacagcttcattccattca 964

                                                                        
Query: 504  ctccacgagatattgcatcatcactagcaggtagaagatcatcaattttgtgccatgaga 563
            || ||||||||| ||||||||||||||| ||||  || ||||||||| |||||||||| |
Sbjct: 963  ctgcacgagatactgcatcatcactagctggtaagaggtcatcaattctgtgccatgaaa 904

                                                                        
Query: 564  tctcactgatctcttttcttagtttgaggtgcgaaaacagtatcttncttaacacctgta 623
            | ||||| || ||  ||||| ||||||||||| || ||||| |||   ||||| ||||| 
Sbjct: 903  tttcactaatttc-cttcttggtttgaggtgcaaacacagtgtctcttttaacccctgtt 845

                       
Query: 624  atgatatagag 634
            ||||| |||||
Sbjct: 844  atgatgtagag 834



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 133  gtctatacacatcaagggtacaggagttgatgatctgtcaggatcctaggtacgcagaaa 192
            ||||||||||||||||||| |||| ||||||| |  |||||||| |||||| || || ||
Sbjct: 1295 gtctatacacatcaagggtgcaggtgttgatgcttcgtcaggattctaggtgcgtaggaa 1236

                                                                     
Query: 193  ggaagcatcaatggactgcagaatactggccgtatcgaatctgaagcttctgaagct 249
            |||||| || |||| |||||| || || || || || || |||||| ||||||||||
Sbjct: 1235 ggaagcctccatggcctgcaggatgcttgcggtgtcaaacctgaagtttctgaagct 1179



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>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0049O12, from chromosome 2, complete sequence
          Length = 155154

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                          
Query: 466    caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 106935 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 106876

                                                        
Query: 526    actagcaggtagaagatcatcaattttgtgccatgagatctc 567
              || |||||| || || ||||| || |||||||||||||||||
Sbjct: 106875 accagcaggaaggagttcatcgatgttgtgccatgagatctc 106834



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                          
Query: 168    tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
              ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 107736 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 107677

                                       
Query: 228    cgaatctgaagcttctgaagctttt 252
              |||| |||||| ||| |||||||||
Sbjct: 107676 cgaacctgaagtttcggaagctttt 107652



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                          
Query: 316    gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
              ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 107624 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 107565

                                    
Query: 376    cttcgctttccacacagtacct 397
              ||||||||||||||||||||||
Sbjct: 107564 cttcgctttccacacagtacct 107543



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 394    acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
              |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 107173 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 107114

                        
Query: 454    ttttagaccc 463
              ||||||||||
Sbjct: 107113 ttttagaccc 107104



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 579    ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
              |||||||||||||| || |||||||||||   |||||||||
Sbjct: 106240 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 106200



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                            
Query: 466      caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
                |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 34398171 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 34398230

                                                          
Query: 526      actagcaggtagaagatcatcaattttgtgccatgagatctc 567
                || |||||| || || ||||| || |||||||||||||||||
Sbjct: 34398231 accagcaggaaggagttcatcgatgttgtgccatgagatctc 34398272



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                            
Query: 168      tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
                ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 34397370 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 34397429

                                         
Query: 228      cgaatctgaagcttctgaagctttt 252
                |||| |||||| ||| |||||||||
Sbjct: 34397430 cgaacctgaagtttcggaagctttt 34397454



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                            
Query: 316      gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
                ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 34397482 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 34397541

                                      
Query: 376      cttcgctttccacacagtacct 397
                ||||||||||||||||||||||
Sbjct: 34397542 cttcgctttccacacagtacct 34397563



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                            
Query: 394      acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
                |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 34397933 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 34397992

                          
Query: 454      ttttagaccc 463
                ||||||||||
Sbjct: 34397993 ttttagaccc 34398002



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 579      ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
                |||||||||||||| || |||||||||||   |||||||||
Sbjct: 34398866 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 34398906



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>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1548_F12
          Length = 118814

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                         
Query: 466   caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
             |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 95818 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 95877

                                                       
Query: 526   actagcaggtagaagatcatcaattttgtgccatgagatctc 567
             || |||||| || || ||||| || |||||||||||||||||
Sbjct: 95878 accagcaggaaggagttcatcgatgttgtgccatgagatctc 95919



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 168   tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
             ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 95017 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 95076

                                      
Query: 228   cgaatctgaagcttctgaagctttt 252
             |||| |||||| ||| |||||||||
Sbjct: 95077 cgaacctgaagtttcggaagctttt 95101



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 316   gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
             ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 95129 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 95188

                                   
Query: 376   cttcgctttccacacagtacct 397
             ||||||||||||||||||||||
Sbjct: 95189 cttcgctttccacacagtacct 95210



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 394   acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
             |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 95580 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 95639

                       
Query: 454   ttttagaccc 463
             ||||||||||
Sbjct: 95640 ttttagaccc 95649



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 579   ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
             |||||||||||||| || |||||||||||   |||||||||
Sbjct: 96513 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 96553



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>dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_C07
          Length = 115190

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Plus

                                                                         
Query: 466   caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 525
             |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 14413 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 14472

                                                       
Query: 526   actagcaggtagaagatcatcaattttgtgccatgagatctc 567
             || |||||| || || ||||| || |||||||||||||||||
Sbjct: 14473 accagcaggaaggagttcatcgatgttgtgccatgagatctc 14514



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 168   tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
             ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 13612 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 13671

                                      
Query: 228   cgaatctgaagcttctgaagctttt 252
             |||| |||||| ||| |||||||||
Sbjct: 13672 cgaacctgaagtttcggaagctttt 13696



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 316   gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
             ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 13724 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 13783

                                   
Query: 376   cttcgctttccacacagtacct 397
             ||||||||||||||||||||||
Sbjct: 13784 cttcgctttccacacagtacct 13805



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 394   acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 453
             |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 14175 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 14234

                       
Query: 454   ttttagaccc 463
             ||||||||||
Sbjct: 14235 ttttagaccc 14244



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 579   ttcttagtttgaggtgcgaaaacagtatcttncttaacacc 619
             |||||||||||||| || |||||||||||   |||||||||
Sbjct: 15108 ttcttagtttgaggcgcaaaaacagtatcccccttaacacc 15148



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>dbj|AK063891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-G06, full
           insert sequence
          Length = 394

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                       
Query: 316 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 375
           ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 117 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 58

                                                           
Query: 376 cttcgctttccacacagtacctctagtagatgtgtctgacttctgata 423
           |||||||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 57  cttcgctttccacacagtacctctagcagacgtgtctgatttctgata 10



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 168 tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 227
           ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 229 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 170

                                    
Query: 228 cgaatctgaagcttctgaagctttt 252
           |||| |||||| ||| |||||||||
Sbjct: 169 cgaacctgaagtttcggaagctttt 145



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>emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chromosome Xq21.32-22.3
              Contains the PCDH19 gene for protocadherin 19 protein and a
              CpG island, complete sequence
          Length = 168065

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 545    tcaattttgtgccatgagatct 566
              ||||||||||||||||||||||
Sbjct: 117166 tcaattttgtgccatgagatct 117145



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>ref|XM_507878.1| PREDICTED: Pan troglodytes similar to DC-TM4F2 precursor
           (LOC450559), mRNA
          Length = 1139

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tgctgcgtgccagatcctgc 291
           ||||||||||||||||||||
Sbjct: 882 tgctgcgtgccagatcctgc 901



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>gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds
          Length = 1339

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 485 taaagcttcatcccattcac 504
           ||||||||||||||||||||
Sbjct: 430 taaagcttcatcccattcac 449



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>gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, complete sequence
          Length = 161803

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    tgctgcgtgccagatcctgc 291
              ||||||||||||||||||||
Sbjct: 105260 tgctgcgtgccagatcctgc 105279



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>gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883
          Length = 2155

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 485  taaagcttcatcccattcac 504
            ||||||||||||||||||||
Sbjct: 1316 taaagcttcatcccattcac 1335



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>gb|BC093016.1| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:110883
           IMAGE:30528940), complete cds
          Length = 1964

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tgctgcgtgccagatcctgc 291
           ||||||||||||||||||||
Sbjct: 663 tgctgcgtgccagatcctgc 682



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>gb|AF311903.1| Homo sapiens DC-TM4F2 precursor, mRNA, complete cds
          Length = 2553

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tgctgcgtgccagatcctgc 291
           ||||||||||||||||||||
Sbjct: 628 tgctgcgtgccagatcctgc 647



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>emb|AL136638.1|HSM801611 Homo sapiens mRNA; cDNA DKFZp564B1037 (from clone DKFZp564B1037)
          Length = 2556

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tgctgcgtgccagatcctgc 291
           ||||||||||||||||||||
Sbjct: 634 tgctgcgtgccagatcctgc 653



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>emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1525

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 485 taaagcttcatcccattcac 504
           ||||||||||||||||||||
Sbjct: 960 taaagcttcatcccattcac 979



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>dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595
          Length = 2188

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 485  taaagcttcatcccattcac 504
            ||||||||||||||||||||
Sbjct: 1365 taaagcttcatcccattcac 1384



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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 522     catcactagcaggtagaaga 541
               ||||||||||||||||||||
Sbjct: 1040748 catcactagcaggtagaaga 1040729



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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 514     tattgcatcatcactagcag 533
               ||||||||||||||||||||
Sbjct: 2124415 tattgcatcatcactagcag 2124434



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>ref|NM_030927.1| Homo sapiens tetraspanin 14 (TSPAN14), mRNA
          Length = 2556

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tgctgcgtgccagatcctgc 291
           ||||||||||||||||||||
Sbjct: 634 tgctgcgtgccagatcctgc 653



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>gb|BC002920.2| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:11352
           IMAGE:3954042), complete cds
          Length = 2493

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 tgctgcgtgccagatcctgc 291
           ||||||||||||||||||||
Sbjct: 558 tgctgcgtgccagatcctgc 577



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>gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 141003

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    taaagcttcatcccattcac 504
              ||||||||||||||||||||
Sbjct: 138055 taaagcttcatcccattcac 138074



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>dbj|AP004310.1| Synechocystis sp. PCC 6803 plasmid pSYSM DNA, complete genome
          Length = 119895

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 535  tagaagatcatcaattttgt 554
            ||||||||||||||||||||
Sbjct: 8971 tagaagatcatcaattttgt 8952



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>dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT37A17, TM0240,
              complete sequence
          Length = 121317

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    agcttctgaagcttttgcca 256
              ||||||||||||||||||||
Sbjct: 118760 agcttctgaagcttttgcca 118779



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    agcttctgaagcttttgcca 256
              ||||||||||||||||||||
Sbjct: 107909 agcttctgaagcttttgcca 107928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,320,942
Number of Sequences: 3902068
Number of extensions: 4320942
Number of successful extensions: 73650
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73528
Number of HSP's gapped (non-prelim): 116
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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